SEARCH · USGS Science

Results for “Current Genetics”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

426 records · Page 24Linked to original sources

USGS2017

Historical and projected trends in landscape drivers affecting carbon dynamics in Alaska

Modern climate change in Alaska has resulted in widespread thawing of permafrost, increased fire activity, and extensive changes in vegetation characteristics that have significant consequences for socioecological systems. Despite observations of the heightened sensitivity of these systems to change, there has not been a comprehensive assessment of factors that drive ecosystem changes throughout Alaska. Here we present research that improves our understanding of the main drivers of the spatiotemporal patterns of carbon dynamics using in situ observations, remote sensing data, and an array of modeling techniques. In the last 60 yr, Alaska has seen a large increase in mean annual air temperature (1.7°C), with the greatest warming occurring over winter and spring. Warming trends are projected to continue throughout the 21st century and will likely result in landscape-level changes to ecosystem structure and function. Wetlands, mainly bogs and fens, which are currently estimated to cover 12.5% of the landscape, strongly influence exchange of methane between Alaska's ecosystems and the atmosphere and are expected to be affected by thawing permafrost and shifts in hydrology. Simulations suggest the current proportion of near-surface (within 1 m) and deep (within 5 m) permafrost extent will be reduced by 9–74% and 33–55% by the end of the 21st century, respectively. Since 2000, an average of 678 595 ha/yr was burned, more than twice the annual average during 1950–1999. The largest increase in fire activity is projected for the boreal forest, which could result in a reduction in late-successional spruce forest (8–44%) and an increase in early-successional deciduous forest (25–113%) that would mediate future fire activity and weaken permafrost stability in the region. Climate warming will also affect vegetation communities across arctic regions, where the coverage of deciduous forest could increase (223–620%), shrub tundra may increase (4–21%), and graminoid tundra might decrease (10–24%). This study sheds light on the sensitivity of Alaska's ecosystems to change that has the potential to significantly affect local and regional carbon balance, but more research is needed to improve estimates of land-surface and subsurface properties, and to better account for ecosystem dynamics affected by a myriad of biophysical factors and interactions.

Alaska↗

USGS2005

Stratigraphy and sedimentology of a dry to wet eolian depositional system, Burns formation, Meridiani Planum, Mars

Outcrop exposures of sedimentary rocks at the Opportunity landing site (Meridiani Planum) form a set of genetically related strata defined here informally as the Burns formation. This formation can be subdivided into lower, middle, and upper units which, respectively, represent eolian dune, eolian sand sheet, and mixed eolian sand sheet and interdune facies associations. Collectively, these three units are at least 7 m thick and define a “wetting-upward” succession which records a progressive increase in the influence of groundwater and, ultimately, surface water in controlling primary depositional processes. The Burns lower unit is interpreted as a dry dune field (though grain composition indicates an evaporitic source), whose preserved record of large-scale cross-bedded sandstones indicates either superimposed bedforms of variable size or reactivation of lee-side slip faces by episodic (possibly seasonal) changes in wind direction. The boundary between the lower and middle units is a significant eolian deflation surface. This surface is interpreted to record eolian erosion down to the capillary fringe of the water table, where increased resistance to wind-induced erosion was promoted by increased sediment cohesiveness in the capillary fringe. The overlying Burns middle unit is characterized by fine-scale planar-laminated to low-angle-stratified sandstones. These sandstones accumulated during lateral migration of eolian impact ripples over the flat to gently undulating sand sheet surface. In terrestrial settings, sand sheets may form an intermediate environment between dune fields and interdune or playa surfaces. The contact between the middle and upper units of the Burns formation is interpreted as a diagenetic front, where recrystallization in the phreatic or capillary zones may have occurred. The upper unit of the Burns formation contains a mixture of sand sheet facies and interdune facies. Interdune facies include wavy bedding, irregular lamination with convolute bedding and possible small tepee or salt-ridge structures, and cm-scale festoon cross-lamination indicative of shallow subaqueous flows marked by current velocities of a few tens of cm/s. Most likely, these currents were gravity-driven, possibly unchannelized flows resulting from the flooding of interdune/playa surfaces. However, evidence for lacustrine sedimentation, including mudstones or in situ bottom-growth evaporites, has not been observed so far at Eagle and Endurance craters. Mineralogical and elemental data indicate that the eolian sandstones of the lower and middle units, as well as the subaqueous and eolian deposits of the Burns upper unit, were derived from an evaporitic source. This indirectly points to a temporally equivalent playa where lacustrine evaporites or ground-water-generated efflorescent crusts were deflated to provide a source of sand-sized particles that were entrained to form eolian dunes and sand sheets. This process is responsible for the development of sulfate eolianites at White Sands, New Mexico, and could have provided a prolific flux of sulfate sediment at Meridiani. Though evidence for surface water in the Burns formation is mostly limited to the upper unit, the associated sulfate eolianites provide strong evidence for the critical role of groundwater in controlling sediment production and stratigraphic architecture throughout the formation.

Earth and Planetary Science Letters↗

USGS2010

A summary of information on the rust Puccinia psidii Winter (guava rust) with emphasis on means to prevent introduction of additional strains to Hawaii

The neotropical rust fungus Puccinia psidii ( P. psidii ) was originally described from the host common guava in its native Brazil but has been found since on hosts throughout the myrtle family (Myrtaceae), including a dramatic host jump to nonnative Eucalyptus plantations. Most rust fungi are able to live only on a very narrow range of host species. P. psidii is unusual both for having a broad host range and for the intensity of its damage to susceptible young growth. This rust first got a foothold in the United States in Florida more than three decades ago. The U.S. Department of Agriculture (USDA) has since considered it a nonactionable, nonreportable pest. Hawaii and Florida are the only two states with native species in the myrtle family. Over a period of 30 years, this rust has done little damage to any of the scattered native Myrtaceae in Florida, although the host range of the rust has gradually grown to about 30 mostly nonnative species in the family, apparently because of increasing genetic variety of the rust by repeated introductions. However, Florida’s native Myrtaceae are among the roughly 1,100 neotropical species that are largely resistant to P. psidii . The 3,000 species of non-neotropical Myrtaceae of the Pacific, Australia, Asia, and Africa are expected to prove much more vulnerable to P. psidii . Little is known about the genetics or genetic strains of P. psidii , although existing literature shows that there are numerous strains that have differential ability to infect suites of host plants. The rust was first recorded in the state of Hawaii on Oahu in April 2005 and quickly spread throughout the Hawaiian Islands. The main concern in Hawaii became the potential threat to ohia, Metrosideros polymorpha (Myrtaceae), the endemic forest tree species overwhelmingly important in Hawaii’s nature and culture. The potential ecological consequences of a virulent strain of rust on ohia forests are immense, due to its role as a foundation tree species and the diversity of niches it fills in Hawaii. A single genetic strain of the rust is established in Hawaii, apparently composed of a single genotype lacking sexual reproduction. P. psidii has been found statewide in Hawaii attacking Myrtaceae from near sea level to about 1,200 m elevation in areas with rainfall ranging from 750–5,000 mm. Five of eight native Myrtaceae and at least 15 nonnative species have been observed as hosts of P. psidii in Hawaii. The federally endangered Eugenia koolauensis (nioi) and the nonendangered indigenous species Eugenia reinwardtiana are severely damaged. The introduced (an Asian species) and invasive rose apple, Syzygium jambos , is severely affected at a landscape scale, with widespread crown dieback and many instances of complete tree death. In spite of billions of wind-dispersed rust spores produced from rose apple infestations during 2006 to 2008, adjacent ohia have been little affected to date by the rust strain in Hawaii. Within the elevation range of the rust, P. psidii is found on less than 5 percent of the ohia trees in the wild; on those ohia trees on which the rust is found, it is normally found on less than 5 percent of the leaves. The strain in Hawaii has not attacked many of the species known to be infected by the rust elsewhere, including common guava. On the basis of the very substantial genetic diversity of the much-studied, crop-damaging species of the genus Puccinia , there is good reason to believe that there are at minimum dozens and likely hundreds or thousands of genotypes of P. psidii , likely concentrated in the core range in Brazil but with potential for dispersal by globalization. Multiple genotypes are believed already present in the United States and certain to spread freely in the absence of restrictions. The U.S. Forest Service has initiated a major collaborative project in Brazil to investigate the genetics of susceptibility of Hawaii’s ohia to P. psidii , but initial results will likely not be available for several years. If just one more strain reaches Hawaii, the consequences could be dire for ohia, with each new genotype arriving having an unknown likelihood of increasing damage to ohia; possibilities for mutation and (or) genetic mixing, even with asexual strains, are apparently substantial, based on what is known about other Puccinia species. Investigations are needed to clarify rust-nioi relationships. However, it is likely that keeping out new strains of P. psidii may be important for long-term survival of nioi as well as for the health of ohia forest. The source of Hawaii’s initial invasion by P. psidii is uncertain but is strongly suspected to have been decorative foliage of species in the myrtle family from the mainland United States, most likely California, where there had been outbreaks of this rust on cultivated myrtle in 2005. In 2006–7, Maui’s Hawaii Department of Agriculture (HDOA) inspectors intercepted several P. psidii infected shipments of foliage myrtle, shipped from several California counties. Recognizing the huge threat of the rust to Hawaii’s one million acres of ohia forests, and consequently to Hawaii’s watersheds and biodiversity, Hawaii’s Board of Agriculture unanimously approved an interim rule in August 2007 banning importation of plants in the myrtle family from “infested areas,” specified as South America, Florida, and California. However, the interim rule has not been made permanent by HDOA, and the department has stated that it needs further information to formulate a long-term rule that imposes appropriate measures. Rust spores can survive for 2 to 3 months, and the pathogen can be transported to Hawaii on Myrtaceae from anywhere in the world through the United States mainland. There is much geographic reshuffling of flowers and foliage among the far-flung firms in the trade, especially for bouquet making. Because P. psidii is a nonactionable and nonreportable pest in the United States, foliage and flowers of the myrtle family can move freely into the country (usually but not necessarily always through the ports of Miami or Los Angeles), and from state to state. Currently, the State of Hawaii regulates incoming plant material in the family Myrtaceae by visual inspection. Inspection capacity and latent (asymptomatic) infections limit the ability to detect the rust. New molecular tests could improve detection efficiency, but the cost and the time required to process samples currently precludes their routine use in ports of entry. Interdiction, which has effectively kept coffee rust ( Hemileia vastatrix ) out of Hawaii for 120 years, offers the strongest protection for Hawaii’s native ecosystems from P. psidii . Interdiction of Myrtaceae from the continental United States could have the important supplementary benefit of preventing establishment in Hawaii of other very significant pests of multiple species of Myrtaceae that are already in the country, including: the Eugenia psyllid Trioza eugeniae (Hemiptera: Psyllidae); Chrysophtharta m-fuscum , the Eucalyptus tortoise beetle (Coleoptera: Chrysomelidae); Leptocybe invasa , the blue gum chalcid wasp (Hymenoptera: Chalcidae); and the fungal pathogens Mycosphaerella molleriana (Ascomycota: Mycosphaerelliaceae, crinkle leaf disease of Eucalyptus spp.) and Neofusicoccum parvum (Ascomycota: Botryosphaeriaceae), currently causing serious damage to Syzygium paniculatum in south Florida nurseries. Each of these pests would be likely to cause very significant damage to native and (or) cultivated Myrtaceae in Hawaii. Each of these pests is a prime candidate for transport by the foliage and (or) nursery stock pathways from Florida and California into Hawaii. Hawaii Department of Agriculture has a clear mandate to protect Hawaii’s natural environment, forestry and cultivated Myrtaceae. Principles of the World Trade Organization’s Treaty on Sanitary and Phytosanitary Measures and the International Plant Protection Convention are consistent with the right of Hawaii to take action. The current threat of P. psidii and the other five serious threats to Myrtaceae are primarily posed by the importation of infected plants from the continental United States; however, that may change in the future. If Hawaii were to decide to take a stand (through State regulation) to protect its native and introduced Myrtaceae, there is a possibility that USDA would consider Federal regulation of Myrtaceae from foreign countries.

Hawaii↗

USGS2024

Development of an 8K SNP chip to assess adaptive diversity and hybridization in polar bears

The polar bear ( Ursus maritimus ) is a species particularly vulnerable to the effects of climate change. As the climate warms, polar bears will be forced to move to more suitable habitats which are likely to shrink, adapt to the new conditions, or decline in population size. However, the genomic diversity within and among all 19 subpopulations of polar bears, and therefore their adaptive potential, is currently unknown. In addition, warmer climates are likely to result in more frequent contact between polar bears and grizzly bears ( U. arctos ), with which they can hybridize. Here we describe the development, quality control, and application of the Ursus maritimus V2 SNP chip. This 8 K SNP chip contains loci explicitly selected to assess both RAD-derived and transcriptome-derived loci, as well as SNPs to detect hybridization between species. A total of 7,239 loci (90.3% of those printed) were successfully genotyped, with over 99% genotype concordance for individuals typed in duplicate on this chip, and between individuals typed here and on the Ursus maritimus V1 SNP chip. Using simulations, we demonstrate that the markers have high accuracy and efficiency to detect hybridization and backcrosses between polar bears and grizzly bears. However, empirical analysis of 371 polar bears, 440 grizzly bears, and 8 known hybrids found no novel instances of recent hybridization. The Ursus maritimus V2 SNP chip provides a powerful tool for monitoring the adaptive potential of this species along with assessing population structure, quantitative genomics, and hybridization in polar bears.

Conservation Genetics Resources↗

USGS2007

Thermal evolution and exhumation of deep-level batholithic exposures, southernmost Sierra Nevada, California

The Tehachapi complex lies at the southern end of the Sierra Nevada batholith adjacent to the Neogene-Quaternary Garlock fault. The complex is composed principally of high-pressure (8-10 kbar) Cretaceous batholithic rocks, and it represents the deepest exposed levels of a continuous oblique crustal section through the southern Sierra Nevada batholith. Over the southern ???100 km of this section, structural/petrologic continuity and geochronological data indicate that ???35 km of felsic to intermediate-composition crust was generated by copious arc magmatism primarily between 105 and 99 Ma. In the Tehachapi complex, these batholithic rocks intrude and are bounded to the west by similar-composition gneissic-textured high-pressure batholithic rocks emplaced at ca. 115-110 Ma. This lower crustal complex is bounded below by a regional thrust system, which in Late Cretaceous time tectonically eroded the underlying mantle lithosphere, and in series displaced and underplated the Rand Schist subduction assemblage by low-angle slip from the outboard Franciscan trench. Geophysical and mantle xenolith studies indicate that the remnants of this shallow subduction thrust descend northward through the crust and into the mantle, leaving the mantle lithosphere intact beneath the greater Sierra Nevada batholith. This north-dipping regional structure records an inflection in the Farallon plate, which was segmented into a shallow subduc-tion trajectory to the south and a normal steeper trajectory to the north. We combine new and published data from a broad spectrum of thermochronom-eters that together form a coherent data array constraining the thermal evolution of the complex. Integration of these data with published thermobarometric and petro-genetic data also constrains the tectonically driven decompression and exhumation history of the complex. The timing of arc magmatic construction of the complex, as denoted above, is resolved by a large body of U/Pb zircon ages. High-confidence thermochronometric data track a single retrogressing path commencing from widely established solidus conditions at ca. 100 Ma, and traversing through time-temperature space as follows: (1) Sm/Nd garnet ???770-680 ??C at ca. 102-95 Ma, (2) U/Pb titanite ???750-600 ??C at ca. 102-95 Ma, (3) Ar/Ar hornblende ???570-490 ??C at ca. 94-91 Ma, (4) Rb/Sr biotite ???390-260 ??C at ca. 90-86 Ma, (5) Ar/Ar biotite ???320-240 ??C at ca. 88-85 Ma, and (6) (U-Th)/He zircon ???230-170 ??C at ca. 88-83 Ma. Additional stratigraphic constraints place the complex at surface conditions in Paleocene-early Eocene time (ca. 66-55 Ma). Integration of these results with thermobarometric and structural data, including published data on the underlying Rand Schist, reveals a profound tectonic event whereby rapid cooling and exhumation at rates potentially as high as 100s ??C/m.y. and >5 mm/yr initiated at ca. 98 Ma and peaked between 96 and 94 Ma. Between 93 and 85 Ma, cooling rates remained high, but decelerated with or without significant exhumation. Subsequent cooling and exhumation rates are poorly constrained but were much slower and ultimately resulted in Paleocene-Eocene surface exposure. Initial rapid exhumation and cooling are hypothesized to have been driven by abrupt flattening in the corresponding segment of the Farallon plate and the resulting tectonic erosion of the underlying mantle lithosphere. Protolith as well as meta-morphic pressure-temperature and age constraints on the Rand Schist indicate its rapid low-angle subduction between 93 and 88 Ma. Comparison of the Rand Schist and Tehachapi complex pressure-temperature-time paths in conjunction with structural relations strongly suggest that the schist ascended the equivalent of ???4 kbar relative to the Tehachapi complex by low-angle normal displacement along the Rand fault between 88 and 80 Ma to attain its current underplated structural position. Such extensional tectonism is hypothesized to have been driven by slab rollback

Conference Paper↗

USGS2013

Diablotin Pterodroma hasitata : a biography of the endangered Black-capped Petrel

The Black-capped Petrel Pterodroma hasitata was believed extinct throughout much of the 20th century. It is the only gadfly petrel currently known to breed in the Caribbean Basin. Now seriously endangered, the species is presumed extirpated from Martinique, Dominica, and Guadeloupe, and breeding populations currently occur only on Hispaniola and perhaps Cuba. A related form (now considered a full species) once bred, but is now apparently extinct, on Jamaica. The Black-capped Petrel breeding population may number as few as 500 breeding pairs. Remaining populations suffer from multiple threats to terrestrial and pelagic habitats, including harvest by humans and predation by introduced mammals. The exact sizes, locations, and detailed chronologies of all Black-capped Petrel breeding sites remain poorly studied, although major colonies are today apparently restricted to steep sea and inland cliffs along the La Selle Ridge in Hispaniola. The largest known breeding population occurs in Haiti, although there is continued discussion about a possible breeding site in Cuba in the Sierra Maestra mountain range. Accounts from Cuba are based on the unverified assumption that birds observed at sea just offshore of that island are breeding locally. All evidence at present indicates that waters in or adjacent to the Florida Current and the Gulf Stream between north Florida and southern Virginia provide the primary foraging range of Black-capped Petrels. A small foraging area just off of southeast Cuba has also been reported, but the extent and seasonal use of this area are unknown. Concentrations of birds can be found along the Gulf Stream in southeastern US waters throughout the year, but are particularly common in May, August, and late December through early January. Concentrations of adult birds during winter, when peak breeding activity is underway, suggest that breeding birds forage along the Gulf Stream while commuting to and from breeding colonies. Such long-distance foraging is certainly possible for Pterodroma species. Potential threats to Black-capped Petrels include introduced predators, human encroachment on breeding and foraging habitats, and offshore oil, gas, and wind energy development. Increased mercury levels associated with petroleum production also pose a potential threat, as the Black-capped Petrel seems to be highly susceptible to mercury bioaccumulation compared with other pelagic species. In addition, fires and other bright light sources are known to attract Black-capped Petrels, making collisions with wires and other structures on lighted ships and platforms a potential concern. Haitian social-economic instability and increasing habitat loss suggest the likelihood of further population declines and increasing vulnerability of the species to extinction. Our findings are in accord with the recent decision by the US Fish and Wildlife Service (USFWS) to evaluate the need for additional protection of the species and the primary foraging habitat off the southeastern United States under the Endangered Species Act (USFWS 2012). Additional conservation measures and research strategies that warrant further consideration include (1) protection, monitoring, and management of known breeding populations and nesting habitat in the Dominican Republic and Haiti through controlling predators, installing artificial nest burrows in appropriate sites and hiring local wardens at breeding sites during the nesting season; (2) local and regional training, education and public awareness (e.g. Blanchard & Nettleship 1992); (3) restoration of the original common name Diablotin to common usage to promote the historical and cultural importance of this species; (4) studies to determine the distribution and genetic variability in the remaining populations; and (5) studies of satellite-tagged birds to assess their seasonal and geographic use of pelagic habitats.

Marine Ornithology: Journal of Seabird Research an↗

USGS2013

Vegetation projections for Wind Cave National Park with three future climate scenarios: Final report in completion of Task Agreement J8W07100052

Introduction The effects of climate change on the natural resources protected by Parks will likely be substantial, but geographically variable, due to local variation in climate trajectories and differences among ecosystems in their vulnerability to climate change. The projections of general circulation models (GCMs) indicate the possible magnitude and direction of future climate change for a region, but the utility of these projections for more local scales, those of individual National Park Service (NPS) units, are more uncertain because the coarse-scale GCMs lack much of the topographic detail that alters local climates. In addition, complex, interacting effects of temperature, precipitation, atmospheric CO 2 concentrations, fire, and herbivores on the vegetation that is the foundational natural resource of many NPS units present challenges in assessing the effects of projected future climates on plant and animal assemblages managed by the NPS. In spring 2009, Wind Cave National Park (WICA) served as a case study in a workshop assessing the use of scenario planning as a tool for park management planning in the face of rapidly changing climate. One outcome of the workshop was the recognized need for quantitative models to better understand the range of possible vegetation changes under different future climates and management decisions. This report addresses this need; it describes our adaptation of a dynamic global vegetation model (DGVM) to WICA vegetation and the resulting projections of future vegetation under three future climate scenarios and 11 management scenarios determined by Park natural resource managers. Wind Cave National Park lies along a narrow transition zone between the ponderosa pine (Pinus ponderosa) forests of the Black Hills and the mixed grass prairie that once extended with few interruptions over the lower, gentler terrain, subject to warmer, drier climate to the east and south of the Park. The location and character of this transition is strongly influenced by fire frequency and intensity (Brown and Sieg 1999). Furthermore, the mixed grass prairie occupies a broader transition zone between eastern tallgrass prairie and the shortgrass prairie of the western Great Plains. The dominance of species characteristic of these two prairie types varies with soil moisture availability, evaporative demand, and recent grazing history (Cogan et al. 1999). In addition, Wind Cave lies near the midpoint of a long gradient of C 3 (cool season) grass dominance to the north and C 4 (warm season) grass dominance to the south. The ecotonal position of WICA may make it particularly sensitive to climate change. For example, small changes in fire frequency and/or intensity and the vigor of trees vs. grass could dramatically shift the proportions of these two lifeforms. The Park hydrology is also sensitive to changes in the balance between infiltration of precipitation and evapotranspiration, as on average, only a small fraction of annual precipitation reaches the deeper soil layers that feed permanent streamflow. The resources at risk at Wind Cave NP include the Cave itself, as well as small backcountry caves, a genetically important bison herd, and other prairie species including the black-tailed prairie dog and endangered black-footed ferrets. All of these resources will be directly affected by climate change impacts on vegetation and hydrology. Natural resource management challenges at WICA are substantial, diverse, and intertwined. Aboveground, the park has been recognized as exemplary for its high quality vegetation (Marriot et al. 1999), though the park is relatively small for the diversity of vegetation types and species that it supports. Even without a changing climate, maintaining the integrity of the plant communities is complicated by the park’s legislated responsibility to maintain viable populations of bison, elk and pronghorn. In addition, the federally endangered black-footed ferret was recently re-introduced to the park. This species requires large extents of prairie dog towns for prey and habitat. Prairie dogs impact vegetation by constant clipping, grazing and soil disturbance, thereby affecting plant composition and productivity. Moreover, naturally high interannual climate variability and the strong influence of precipitation on grass productivity in this region combine to yield high interannual variability in the amount of forage available for the wildlife that the park is tasked to maintain. Finally, fire, which is now primarily controlled by WICA and NPS Northern Great Plains fire management programs, is intertwined with all other natural resource issues at WICA, as it can impact prairie dog colony and forest expansion, ungulate foraging behavior, invasive plant species, and hydrological processes. Although not capable of capturing all of these complexities, dynamic vegetation models do provide a means for quantitatively projecting vegetation futures in future climates under plausible fire and grazing regimes. Our work uses the DGVM MC1 to simulate the effects of future climate projections and management practices on the vegetation of WICA. MC1 is designed to project potential vegetation as influenced by natural processes and hence is appropriate for national parks, where conservation of native biota and ecosystems is of great importance. Since the initial application of MC1 to a small portion of WICA (Bachelet et al. 2000), the model has been altered to improve model performance with the inclusion of dynamic fire. Applying this improved version to WICA required substantial recalibration, during which we have made a number of improvements to MC1 that will be incorporated as permanent changes. In this report we document these changes and our calibration procedure following a brief overview of the model. We compare the projections of current vegetation to the current state of the park and present projections of vegetation dynamics under future climates downscaled from three GCMs selected to represent the existing range in available GCM projections. In doing so, we examine the consequences of different management options regarding fire and grazing, major aspects of biotic management at Wind Cave.

South Dakota↗

USGS1996

Shallow marine event sedimentation in a volcanic arc-related setting: The Ordovician Suri Formation, Famatina Range, northwest Argentina

The Loma del Kilómetro Member of the Lower Ordovician Suri Formation records arc-related shelf sedimentation in the Famatina Basin of northwest Argentina. Nine facies, grouped into three facies assemblages, are recognized. Facies assemblage 1 [massive and parallel-laminated mudstones (facies A) locally punctuated by normally graded or parallel-laminated silty sandstones (facies B] records deposition from suspension fall-out and episodic storm-induced turbidity currents in an outer shelf setting. Facies assemblage 2 [massive and parallel-laminated mudstones (facies A) interbedded with rippled-top very fine-grained sandstones (facies D)] is interpreted as the product of background sedimentation alternating with distal storm events in a middle shelf environment. Facies assemblage 3 [normally graded coarse to fine-grained sandstones (facies C); parallel-laminated to low angle cross-stratified sandstones (facies E); hummocky cross-stratified sandstones and siltstones (facies F); interstratified fine-grained sandstones and mudstones (facies G); massive muddy siltstones and sandstones (facies H); tuffaceous sandstones (facies 1); and interbedded thin units of massive and parallel-laminated mudstones (facies A)] is thought to represent volcaniclastic mass flow and storm deposition coupled with subordinated suspension fall-out in an inner-shelf to lower-shoreface setting. The Loma del Kilómetro Member records regress ive-transgressive sedimentation in a storm- and mass flow-dominated high-gradient shelf. Volcano-tectonic activity was the important control on shelf morphology, while relative sea-level change influenced sedimentation. The lower part of the succession is attributed to mud blanketing during high stand and volcanic quiescence. Progradation of the inner shelf to lower shoreface facies assemblage in the middle part represents an abrupt basinward shoreline migration. An erosive-based, non-volcaniclastic, turbidite unit at the base of this package suggests a sea level fall. Pyroclastic detritus, andesites, and a non-volcanic terrain were eroded and their detritus was transported basinward and redeposited by sediment gravity flows during the low stand. The local coexistence of juvenile pyroclastic detritus and fossils suggests reworking of rare ash-falls. The upper part of the Loma del Kilómetro Member records a transgression with no evidence of contemporaneous volcanism. Biostratinomic, paleoecologic, and ichnologic analyses support this paleoenvironmental interpretations and provide independent evidence for the dominance of episodic sedimentation in an arc-related shallow marine setting. Fossil concentrations were mainly formed by event processes, such as storms and volcaniclastic mass flows. High depositional rates inhibited formation of sediment-starved biogenic concentrations. Collectively, trace fossils belong to the Cruziana ichnofacies. Low diversity, scarcity, and presence of relatively simple forms indicate benthic activity under stressful conditions, most probably linked to high sedimentation rates. Contrasting sedimentary dynamics between ‘normal shelves’ and their volcaniclastic counterparts produce distinct and particular signatures in the stratigraphic record. Arc-related shelves are typified by event deposition with significant participation of sediment gravity flows, relatively high sedimentation rates, textural and mineralogical immaturity of sediments, scarcity and low diversity of trace fossils, and dominance of transported and reworked faunal assemblages genetically related to episodic processes.

Famatina Range, northwest Argentina↗

USGS2017

Inland waters and their role in the carbon cycle of Alaska

The magnitude of Alaska (AK) inland waters carbon (C) fluxes is likely to change in the future due to amplified climate warming impacts on the hydrology and biogeochemical processes in high latitude regions. Although current estimates of major aquatic C fluxes represent an essential baseline against which future change can be compared, a comprehensive assessment for AK has not yet been completed. To address this gap, we combined available data sets and applied consistent methodologies to estimate river lateral C export to the coast, river and lake carbon dioxide (CO 2 ) and methane (CH 4 ) emissions, and C burial in lakes for the six major hydrologic regions in the state. Estimated total aquatic C flux for AK was 41 Tg C/yr. Major components of this total flux, in Tg C/yr, were 18 for river lateral export, 17 for river CO 2 emissions, and 8 for lake CO 2 emissions. Lake C burial offset these fluxes by 2 Tg C/yr. River and lake CH 4 emissions were 0.03 and 0.10 Tg C/yr, respectively. The Southeast and South central regions had the highest temperature, precipitation, terrestrial net primary productivity (NPP), and C yields (fluxes normalized to land area) were 77 and 42 g C·m −2 ·yr −1 , respectively. Lake CO 2 emissions represented over half of the total aquatic flux from the Southwest (37 g C·m −2 ·yr −1 ). The North Slope, Northwest, and Yukon regions had lesser yields (11, 15, and 17 g C·m 2 ·yr −1 ), but these estimates may be the most vulnerable to future climate change, because of the heightened sensitivity of arctic and boreal ecosystems to intensified warming. Total aquatic C yield for AK was 27 g C·m −2 ·yr −1 , which represented 16% of the estimated terrestrial NPP. Freshwater ecosystems represent a significant conduit for C loss, and a more comprehensive view of land-water-atmosphere interactions is necessary to predict future climate change impacts on the Alaskan ecosystem C balance.

Alaska↗

USGS1989

Population ecology and harvest of the American black duck: a review

1. The purpose of our review was to examine available data on population trends and current status of black ducks and trends in natality and survival and to relate these, where possible, to changes in habitat, predation, disease, contaminants, harvest, and hybridization with mallards. 2. The number of black ducks tallied in the winter survey has declined steadily over the past 30 years at an average rate of about 3%/ year. Reliability and precision of the survey are uncertain; it may not provide an adequate index to the continental population of black ducks. Breeding surveys are incomplete and sporadic, but black ducks have decreased in Ontario and increased in the Maritime Provinces and Quebec. 3. Recent declines in numbers of black ducks tallied in the winter survey are not unusual in magnitude or much different from those that have occurred among several other species of waterfowl. 4. At present, black ducks are not especially scarce relative to numbers of several other ducks in eastern North America. 5. There is no solid evidence of major decreases in quality or quantity of breeding habitat for black ducks in recent years; in some areas, habitat has improved. 6. Natural mortality of black ducks has not been well studied, but does not seem unusually high compared to other dabbling ducks. 7. Harvest rates of black ducks are similar to those of sympatric mallards as determined by banding analyses. 8. There is no strong evidence for direct effects of contaminants on black ducks, but some indirect effects through invertebrate food resources have been detected. 9. Age ratios in black ducks show no trend in the past 18 years. 10. The quality and quantity of wintering habitat for black ducks have decreased substantially in some areas. 11. Disease and other natural mortality that affect black ducks do .not occur in unusually high frequency. 12. A decline in harvest of black ducks has occurred; most of the decline has been in the United States, especially since restrictive regulations were implemented in 1983. 13. Recovery rates of black ducks have declined recently in the U.S., but not in Canada. 14. Survival rates of black ducks are 56-63% for adults and 43% for young. These rates of survival are similar to comparable estimates in sympatric mallards. 15. Long hunting seasons may depress survival in some sex-age classes of black ducks, buteffects of small reductions in survival on population trends are unknown. 16. Available evidence does not support the contention that hunting is either the sole or most important cause of the decline in the winter tally of black duck numbers. 17. Surveys and banding of black ducks should be thoroughly reviewed and maintained or improved as warranted. Obtaining or maintaining a reasonable index to numbers of black ducks is the top priority among survey needs. 18. Experimental manipulation of hunting seasons should be considered to elucidate relationships among regulations, harvest, survival, and population trends. 19. Black ducks and mallards are genetically similar; there is as much genetic differentiation within the 2 species as there is between them. 20. Black duck x mallard hybrids are fertile. Hybrids are difficult to detect by plumage and thus published frequencies (0-13%) of hybrids may be low. 21. Hybridization could be a result of concomitant mallard increases and black duck decreases, or changes in black duck-to-mallard ratios could be from hybridization and genetic swamping of black ducks.

Wildlife Society Bulletin↗

USGS2013

Modeling the effects of fire severity and climate warming on active layer and soil carbon dynamics of black spruce forests across the landscape in interior Alaska

There is a substantial amount of carbon stored in the permafrost soils of boreal forest ecosystems, where it is currently protected from decomposition. The surface organic horizons insulate the deeper soil from variations in atmospheric temperature. The removal of these insulating horizons through consumption by fire increases the vulnerability of permafrost to thaw, and the carbon stored in permafrost to decomposition. In this study we ask how warming and fire regime may influence spatial and temporal changes in active layer and carbon dynamics across a boreal forest landscape in interior Alaska. To address this question, we (1) developed and tested a predictive model of the effect of fire severity on soil organic horizons that depends on landscape-level conditions and (2) used this model to evaluate the long-term consequences of warming and changes in fire regime on active layer and soil carbon dynamics of black spruce forests across interior Alaska. The predictive model of fire severity, designed from the analysis of field observations, reproduces the effect of local topography (landform category, the slope angle and aspect and flow accumulation), weather conditions (drought index, soil moisture) and fire characteristics (day of year and size of the fire) on the reduction of the organic layer caused by fire. The integration of the fire severity model into an ecosystem process-based model allowed us to document the relative importance and interactions among local topography, fire regime and climate warming on active layer and soil carbon dynamics. Lowlands were more resistant to severe fires and climate warming, showing smaller increases in active layer thickness and soil carbon loss compared to drier flat uplands and slopes. In simulations that included the effects of both warming and fire at the regional scale, fire was primarily responsible for a reduction in organic layer thickness of 0.06 m on average by 2100 that led to an increase in active layer thickness of 1.1 m on average by 2100. The combination of warming and fire led to a simulated cumulative loss of 9.6 kgC m −2 on average by 2100. Our analysis suggests that ecosystem carbon storage in boreal forests in interior Alaska is particularly vulnerable, primarily due to the combustion of organic layer thickness in fire and the related increase in active layer thickness that exposes previously protected permafrost soil carbon to decomposition.

Alaska↗

USGS2009

Prevention, early detection and containment of invasive, nonnative plants in the Hawaiian Islands: current efforts and needs

Introduction: Invasive, non-native plants (or environmental weeds) have long been recognized as a major threat to the native biodiversity of oceanic islands (Cronk & Fuller, 1995; Denslow, 2003). Globally, several hundred non-native plant species have been reported to have major impacts on natural areas on oceanic islands (Kueffer et al ., 2009). In Hawaii, at least some 50 non-native plant species reach dominance in natural areas (Kueffer et al ., 2009) and many of them are known to impact ecosystem processes or biodiversity. One example is the invasive Australian tree fern ( Cyathea cooperi ), which has been shown to be very efficient at utilizing soil nitrogen and can grow six times as rapidly in height, maintain four times more fronds, and produce significantly more fertile fronds per month than the native Hawaiian endemic tree ferns, Cibotium spp. (Durand & Goldstein, 2001a, b). Additionally, while native tree ferns provide an ideal substrate for epiphytic growth of many understory ferns and flowering plants, the Australian tree fern has the effect of impoverishing the understory and failing to support an abundance of native epiphytes (Medeiros & Loope, 1993). Other notorious examples of invasive plant species problematic for biodiversity and ecosystem processes in Hawaii include miconia ( Miconia calvescens ), strawberry guava ( Psidium cattleianum ), albizia ( Falcataria moluccana ), firetree ( Morella faya ), clidemia ( Clidemia hirta ), kahili ginger ( Hedychium gardnerianum ), and fountain grass ( Pennisetum setaceum ), to name just a few. Fireweed ( Senecio madagascariensis ) is a recent example of a seriously problematic invasive species for Hawaii’s agriculture and is damaging certain high-elevations native ecosystems as well. The threat of invasive plants has long been recognized in Hawaii and is well documented (e.g. Cox, 1999; Loope & Kraus, 2009 in press; Loope et al ., 2004; Mooney & Drake, 1986; Stone & Scott, 1985; Stone et al. , 1992). In many respects, Hawaii may be near the forefront among national and international efforts to address the burgeoning threat of invasive plants, perhaps especially in the field of outreach and education (Holt, 1996; Van Driesche & Van Driesche, 2000). However, given the scale of the problem many challenges still need to be addressed and gaps in the existing management system need to be identified. In particular, it appears that new non-native plant species are still introduced to the Hawaiian Islands at a high rate with little or no regard for their potential invasiveness. In fact, a Pacific-wide and a global survey of non-native plants on oceanic islands have both shown that on Hawaii among all archipelagos by far the highest number of problematic invasive species known from other areas in the world is already present (Denslow et al . 2009, Kueffer et al . 2009). Hawaii lacks an effective mechanism for tracking what species are present or incoming. For instance, early detection nursery surveys conducted on Maui in 2008 found over 300 species of cultivated vascular plants that have not previously been recorded in Hawaii (Starr et al. , in prep.). In spite of an innovative Hawaii Biological Survey (e.g. Eldredge & Evenhuis, 2003), there is no mechanism for recording presence of a species until it becomes naturalized. Some of these new introductions may quickly become serious pests. Fireweed, first recorded in Hawaii on the Big Island in the early 1980s, is now considered one of the Kueffer & Loope 2009 5/48 worst weeds of pastures and is also invading natural areas from near sea level to above 10,000 feet. Although the cultivated and as yet non-invasive Cortaderia selloana has been present in Hawaii for 50 years or more, the morphologically similar Cortaderia jubata was simultaneously found to be present on Maui and invading on a large scale in 1989. It played an important role in inspiring the establishment of the Maui Invasive Species Committee (MISC) in 1997, and MISC now spends roughly $200,000 per year removing and containing C. jubata to keep it from becoming widespread in high elevation conservation lands of East and West Maui. The existence of many similar examples shows that to date regulatory action to prevent new invasive plant species from establishing and spreading in Hawaii has not yet been as successful as it needs to be. In particular, because some problematic invasive species known from other areas in the world (Kueffer et al ., 2009; Weber, 2003) have not yet been recorded from Hawaii, preventive measures against the introduction and spread of such likely invasive species is therefore an urgent need for Hawaii. Indeed, regulation of importation and early detection and eradication of introduced species before they become abundant and widespread are widely considered the most cost-efficient and often only effective measures against the threat of new invasive species (Kueffer & Hirsch Hadorn, 2008; Wittenberg & Cock, 2001). Timing seems favorable for Hawaii to achieve effective protection against the threat of new invasive species through prevention, early detection, and eradication/containment. Through the establishment and evolution of Invasive Species Committees (ISCs) on each major Hawaiian island, the institutional capacity has been built up for prevention, early detection, containment, and outreach at an island scale. Weed risk assessment (Daehler et al ., 2004) and early detection methodologies (Starr et al. , in review-a, b) have been developed and tested specifically for Hawaii. Containment strategies have been successful (e.g., Special Ecological Areas in Hawaii Volcanoes National Park), and so have eradications of particular species on an island scale (e.g. mullein ( Verbascum thapsus ) and other species on Maui, fireweed ( Senecio madagascariensis ) on Kauai). These successful management strategies may be further strengthened through recently developed novel approaches in research (e.g. remote sensing, species distribution modelling, and molecular genetics tools). Another major recent achievement is the gained support of the plant industry for preventive measures against invasive species (see p. 13ff). Last but not least, regulatory action is also moving forward. Passage of House Bill 2517 by the 2008 Hawaii House and Senate and prompt signing of the bill into law by the Governor provides hope that action to ban the sale of a meaningful suite of restricted weeds can quickly proceed through the rulemaking phase into the implementation phase. This report documents these achievements and experiences and provides a range of perspectives on how to further develop prevention, early detection and containment of invasive species in Hawaii. The report is based on a symposium and workshop held at the 2008 Hawaii Conservation Conference in Honolulu on 31 July 2008.

Hawaii↗