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At least 415 records · Page 23Linked to original sources
USGS2025

Hybridization and asymmetrical introgression between the vulnerable Gray‐Headed Chickadee and a more abundant congener, the Boreal Chickadee: Implications for conservation

Hybridization is a common process among bird species that can precipitate a mix of positive or negative species outcomes. Particularly for rare populations, detrimental effects of hybridization on demographic growth rates and genetic integrity are of serious concern. In Alaska and a small region of northwestern Canada, the endemic subspecies of Gray-headed Chickadee ( Poecile cinctus lathami ) has declined in recent decades from being locally common to being extremely rare. The more widespread Boreal Chickadee ( P. hudsonicus ) has become increasingly abundant in areas of sympatry. These changes in abundance may have led to hybridization between Gray-headed Chickadees and Boreal Chickadees. We used a series of analyses to test for signatures of introgression at mitochondrial DNA and nuclear DNA using historical museum samples of both species collected between 1875 and 1979 as well as contemporary Boreal Chickadee samples. In addition, we modeled Gray-headed Chickadee and Boreal Chickadee demographic histories to better understand patterns of effective population size changes and gene flow over time. Introgression of Gray-headed Chickadee nuclear DNA was detected in contemporary and historical Boreal Chickadee populations, and two first-generation hybrid backcrosses were observed in the historical Boreal Chickadee samples. Lack of mitochondrial DNA introgression or backcrossing into the Gray-headed Chickadee historical samples may be an artifact of mate scarcity during the period before local abundances of Boreal Chickadee exceeded Gray-headed Chickadees. Demographic modeling with nuclear loci estimated a low level of symmetric gene flow between Gray-headed Chickadees and Boreal Chickadees since the time of divergence. Our study suggests that hybridization may be linked to Gray-headed Chickadee declines and represents a case study of how museum collections can be used to infer introgression in a population too scarce to directly investigate.

Ecology and Evolution↗
USGS2022

Assembling a safe and effective toolbox for integrated flea control and plague mitigation: Fipronil experiments with prairie dogs

Background Plague, a widely distributed zoonotic disease of mammalian hosts and flea vectors, poses a significant risk to ecosystems throughout much of Earth. Conservation biologists use insecticides for flea control and plague mitigation. Here, we evaluate the use of an insecticide grain bait, laced with 0.005% fipronil (FIP) by weight, with black-tailed prairie dogs (BTPDs, Cynomys ludovicianus ). We consider safety measures, flea control, BTPD body condition, BTPD survival, efficacy of plague mitigation, and the speed of FIP grain application vs. infusing BTPD burrows with insecticide dusts. We also explore conservation implications for endangered black-footed ferrets ( Mustela nigripes ), which are specialized predators of Cynomys . Principal findings During 5- and 10-day laboratory trials in Colorado, USA, 2016–2017, FIP grain had no detectable acute toxic effect on 20 BTPDs that readily consumed the grain. During field experiments in South Dakota, USA, 2016–2020, FIP grain suppressed fleas on BTPDs for at least 12 months and up to 24 months in many cases; short-term flea control on a few sites was poor for unknown reasons. In an area of South Dakota where plague circulation appeared low or absent, FIP grain had no detectable effect, positive or negative, on BTPD survival. Experimental results suggest FIP grain may have improved BTPD body condition (mass:foot) and reproduction (juveniles:adults). During a 2019 plague epizootic in Colorado, BTPDs on 238 ha habitat were protected by FIP grain, whereas BTPDs were nearly eliminated on non-treated habitat. Applications of FIP grain were 2–4 times faster than dusting BTPD burrows. Significance Deltamethrin dust is the most commonly used insecticide for plague mitigation on Cynomys colonies. Fleas on BTPD colonies exhibit the ability to evolve resistance to deltamethrin after repeated annual treatments. Thus, more tools are needed. Accumulating data show orally-delivered FIP is safe and usually effective for flea control with BTPDs, though potential acute toxic effects cannot be ruled out. With continued study and refinement, FIP might be used in rotation with, or even replace deltamethrin, and serve an important role in Cynomys and black-footed ferret conservation. More broadly, our stepwise approach to research on FIP may function as a template or guide for evaluations of insecticides in the context of wildlife conservation.

South Dakota↗
USGS2011

Sagebrush ecosystem conservation and management: Ecoregional assessment tools and models for the Wyoming Basins

The Wyoming Basins are one of the remaining strongholds of the sagebrush ecosystem. However, like most sagebrush habitats, threats to this region are numerous. This book adds to current knowledge about the regional status of the sagebrush ecosystem, the distribution of habitats, the threats to the ecosystem, and the influence of threats and habitat conditions on occurrence and abundance of sagebrush associated fauna and flora in the Wyoming Basins. Comprehensive methods are outlined for use in data collection and monitoring of wildlife and plant populations. Field and spatial data are integrated into a spatially explicit analytical framework to develop models of species occurrence and abundance for the egion. This book provides significant new information on distributions, abundances, and habitat relationships for a number of species of conservation concern that depend on sagebrush in the region. The tools and models presented in this book increase our understanding of impacts from land uses and can contribute to the development of comprehensive management and conservation strategies.

Wyoming↗
USGS2024

Climate change amplifies ongoing declines in sagebrush ecological integrity

Understanding how climate change will contribute to ongoing declines in sagebrush ecological integrity is critical for informing natural resource management, yet complicated by interactions with wildfire and biological invasions. Here, we assessed potential future changes in sagebrush ecological integrity under a range of scenarios using an individual plant-based simulation model, integrated with remotely sensed estimates of current sagebrush ecological integrity. The simulation model allowed us to estimate how climate change, wildfire, and invasive annuals interact to alter the potential abundance of key plant functional types that influence sagebrush ecological integrity: sagebrush, perennial grasses, and annual grasses. Our results suggest that climate driven reductions in sagebrush ecological integrity may occur over broader areas than increases in sagebrush ecological integrity. Declines in sagebrush ecological integrity were most likely in hot and dry regions while increases were more likely in cool and wet regions. Increases in wildfire probability, largely driven by increasing invasive annual grass abundance, resulted in projected declines in sagebrush abundance and sagebrush ecological integrity in some regions, particularly the Great Basin. The most common projected transitions in sagebrush habitat classification were declines from Core Sagebrush Area to Growth Opportunity Area and from Growth Opportunity Area to Other Rangeland Area. Responses varied considerably across projections from different global climate models, highlighting the importance of climate uncertainty. However, our projections tended to be robust in areas that currently have the highest sagebrush ecological integrity. Our results provide a long-term perspective on the vulnerability of sagebrush ecosystems to climate change and may inform geographic prioritization of conservation and restoration investments. These results suggest that ongoing threats, such as the continued invasion by annual grasses and increased wildfire frequency, are likely to be amplified by climate change, and imply that the current imbalance between capacity for conservation to address threats to sagebrush will grow as the climate warms.

Rangeland Ecology and Management↗
USGS2015

Occupancy estimation for rare species using a spatially-adaptive sampling design

Summary 1. Spatially clustered populations create unique challenges for conservation monitoring programmes. Advances in methodology typically are focused on either the design or the modelling stage of the study but do not involve integration of both. 2. We integrate adaptive cluster sampling and spatial occupancy modelling by developing two models to handle the dependence induced by cluster sampling. We compare these models to scenarios using simple random sampling and traditional occupancy models via simulation and data collected on a rare plant species, Tamarix ramosissima , found in China. 3. Our simulations show a marked improvement in confidence interval coverage for the new models combined with cluster sampling compared to simple random sampling and traditional occupancy models, with greatest improvement in the presence of low detection probability and spatial correlation in occupancy. 4. Accounting for the design using the simple cluster random-effects model reduces bias considerably, and full spatial modelling reduces bias further, especially for large n when the spatial covariance parameters can be estimated reliably. Both new models build on the strength of occupancy modelling and adaptive sampling and perform at least as well, and often better, than occupancy modelling alone. 5. We believe our approach is unique and potentially useful for a variety of studies directed at patchily distributed, clustered or rare species exhibiting spatial variation.

Methods in Ecology and Evolution↗
USGS2017

Climate change refugia and habitat connectivity promote species persistence

Background Climate change refugia, areas buffered from climate change relative to their surroundings, are of increasing interest as natural resource managers seek to prioritize climate adaptation actions. However, evidence that refugia buffer the effects of anthropogenic climate change is largely missing. Methods Focusing on the climate-sensitive Belding’s ground squirrel ( Urocitellus beldingi ), we predicted that highly connected Sierra Nevada meadows that had warmed less or shown less precipitation change over the last century would have greater population persistence, as measured by short-term occupancy, fewer extirpations over the twentieth century, and long-term persistence measured through genetic diversity. Results Across California, U. beldingi were more likely to persist over the last century in meadows with high connectivity that were defined as refugial based on a suite of temperature and precipitation factors. In Yosemite National Park, highly connected refugial meadows were more likely to be occupied by U. beldingi . More broadly, populations inhabiting Sierra Nevada meadows with colder mean winter temperatures had higher values of allelic richness at microsatellite loci, consistent with higher population persistence in temperature-buffered sites. Furthermore, both allelic richness and gene flow were higher in meadows that had higher landscape connectivity, indicating the importance of metapopulation processes. Conversely, anthropogenic refugia, sites where populations appeared to persist due to food or water supplementation, had lower connectivity, genetic diversity, and gene flow, and thus might act as ecological traps. This study provides evidence that validates the climate change refugia concept in a contemporary context and illustrates how to integrate field observations and genetic analyses to test the effectiveness of climate change refugia and connectivity. Conclusions Climate change refugia will be important for conserving populations as well as genetic diversity and evolutionary potential. Our study shows that in-depth modeling paired with rigorous fieldwork can identify functioning climate change refugia for conservation.

California↗
USGS2006

The role of the Wetland Reserve Program in conservation efforts in the Mississippi River Alluvial Valley

The Mississippi River Alluvial Valley includes the floodplain of the Mississippi River from Cairo, Illinois, USA, to the Gulf of Mexico. Originally this region supported about 10 million ha of bottomland hardwood forests, but only about 2.8 million ha remain today. Furthermore, most of the remaining bottomland forest is highly fragmented with altered hydrologic processes. During the 1990s landscape-scale conservation planning efforts were initiated for migratory birds and the threatened Louisiana black bear ( Ursus americanus luteolus ). These plans call for large-scale reforestation and restoration efforts in the region, particularly on private lands. In 1990 the Food, Agriculture, Conservation and Trade Act authorized the Wetlands Reserve Program (WRP). The WRP is a voluntary program administered by the United States Department of Agriculture that provides eligible landowners with financial incentives to restore wetlands and retire marginal farmlands from agricultural production. As of 30 September 2005, over 275,700 ha have been enrolled in the program in the Mississippi River Alluvial Valley, with the greatest concentration in Louisiana, Arkansas, and Mississippi, USA. Hydrologic restoration is common on most sites, with open-water wetlands, such as moist-soil units and sloughs, constituting up to 30% of a given tract. Over 33,200 ha of open-water wetlands have been created, potentially providing over 115,000,000 duck-use days. Twenty-three of 87 forest-bird conservation areas have met or exceed core habitat goals for migratory songbirds and another 24 have met minimum area requirements. The WRP played an integral role in the fulfillment of these goals. Although some landscape goals have been attained, the young age of the program and forest stands, and the lack of monitoring, has limited evaluations of the program's impact on wildlife populations.

Mississippi River Alluvial Valley↗
USGS2019

Seamless numerical simulation of a hazard cascade in which a landslide triggers a dam-breach flood and consequent debris flow

Numerical simulations of hazard cascades downstream from moraine-dammed lakes commonly must specify linkages between models of discrete processes such as wave overtopping, dam breaching, erosion, and downstream floods or debris flows. Such linkages can be rather arbitrary and can detract from the ability to accurately conserve mass and momentum during complex sequences of events. Here we describe an alternative methodology in which we use high-resolution lidar topography and 2-D, two-phase conservation laws to seamlessly simulate all stages of a hazard-cascade that culminates in a debris flow. Our simulations employ our depth-integrated numerical model D-Claw to evaluate hazards from prospective breaching of a moraine dam that impounds Carver Lake on the eastern flank of South Sister volcano in central Oregon, USA. We simulate a “worst-case scenario” sequence of events that begins with a hypothetical 1.6 million m3 landslide that originates near the summit of South Sister and enters Carver Lake. Wave generation and displacement of lake water then leads to dam overtopping, breach erosion, and a downstream debris flow that funnels into Whychus Creek and eventually reaches the community of Sisters, Oregon, about 20 km away. Notably, our simulations predict that much of the debris is directed away from Sisters as a result of natural avulsion and flow diversion that occurs near the head of a low-gradient alluvial fan upstream from Sisters. Consequently, predicted hazards to downtown Sisters are less severe than those predicted by 1-D shallow-water simulations of a Carver Lake dam breach that were performed in the 1980s.

Conference Paper↗
USGS2021

Grassland live fractional cover map creation and Geographic Information System (GIS) analysis for rangeland management supporting Kenya Northern Rangelands Trust Conservancies

The handbooks and synchronized MP4 recordings provide hands-on instruction for creating and analyzing vegetation live fractional cover (LFC) maps. The methods and protocols used in the instruction materials follow those developed and recorded in Rangoonwala and Ramsey (2019). The LFC mapping and geographic information system (GIS) analyses highlight the consortium of rangeland conservancies covering the semiarid central region of Kenya (approximately 44,000 square kilometers). The instruction materials are separated into two parts: processing and map-product creation based on remote-sensing images and GIS analyses of the created maps for rangeland management. The image processing is conducted using the advanced and professional software package SeNtinels Application Platform (SNAP) that is supported and maintained by the European Space Agency. SNAP is a free image analyses software package available for download. It is largely icon driven but offers simple to advanced program inserts and batch processing. The GIS analyses are conducted using the software package Quantum Geographic Information System (QGIS), another free and downloadable software. QGIS is compatible with numerous software, including the Esri suite of ArcGIS software and database structure. The image data includes both high-spatial-resolution Sentinel-2 optical data and Sentinel-1 synthetic aperture radar (SAR). Both datasets are freely available via a public portal that is maintained by the European Space Agency. The image-processing instruction handbook covers all aspects of acquiring and processing satellite-image data and importing vector-data sources into SNAP. The GIS analysis handbook covers final creation of map products from the maps created in SNAP and creation of GIS procedures in QGIS that are needed to manage the rangeland resources for wildlife and pastoral grazing. Although focused on the Kenyan conservancies and their semiarid environment, the processing methods and procedures are applicable for similar environments and management, and to a large part, even for integrated mapping and GIS functionality of any managed landscape resource. The instruction handbooks are synchronized to MP4 training videos created with U.S. Geological Survey-licensed Camtasia 9 software. The workbook and MP4 video combinations are suitable for a single user or a workshop setting.

Open-File Report↗
USGS2015

Groundwater availability of the Columbia Plateau Regional Aquifer System, Washington, Oregon, and Idaho

The Columbia Plateau Regional Aquifer System (CPRAS) covers about 44,000 square miles of southeastern Washington, northeastern Oregon, and western Idaho. The area supports a $6-billion per year agricultural industry, leading the Nation in production of apples, hops, and eight other commodities. Groundwater pumpage and surface-water diversions supply water to croplands that account for about 5 percent of the Nation’s irrigated lands. Groundwater also is the primary source of drinking water for the more than 1.3 million people in the study area. Increasing competitive demands for water for municipal, fisheries/ecosystems, agricultural, domestic, hydropower, and recreational uses must be met by additional groundwater withdrawals and (or) by changes in the way water resources are allocated and used throughout the hydrologic system. As of 2014, most surface-water resources in the study area were either over allocated or fully appropriated, especially during the dry summer season. In response to continued competition for water, numerous water-management activities and concerns have gained prominence: water conservation, conjunctive use, artificial recharge, hydrologic implications of land-use change, pumpage effects on streamflow, and effects of climate variability and change. An integrated understanding of the hydrologic system is important in order to implement effective water-resource management strategies that address these concerns. To provide information to stakeholders involved in water-management activities, the U.S. Geological Survey (USGS) Groundwater Resources Program assessed the groundwater availability as part of a national study of regional systems (U.S. Geological Survey, 2008). The CPRAS assessment includes: The present status of groundwater resources, How these resources have changed over time, and Development and application of tools to estimate system responses to stresses from future uses and climate variability and change. This effort builds on previous investigations, especially the USGS Columbia Plateau Regional Aquifer-System Analysis study (CP-RASA). A major product of this new assessment is a numerical groundwater-flow model of the system. The model was used to estimate water-budget components of the hydrogeologic units composing the groundwater system, and to evaluate groundwater availability under existing land- and water-use conditions and a possible future climate scenario representing an increase in pumpage demand due to a warming climate. Information from this study also allowed for analysis of: The CPRAS for predevelopment times (pre-1920), Variations from 1920 through 2007, Conditions during 1985–2007 (referred to as “existing conditions”), and Changes in the system from predevelopment times. The model also is a useful tool for investigating water supply, water demand, management strategies, groundwater-surface water exchanges, and potential effects of changing climate on the hydrologic system.

Idaho, Oregon, Washington↗
USGS2020

Genetic and environmental indicators of climate change vulnerability for desert bighorn sheep

Assessments of organisms’ vulnerability to potential climatic shifts are increasingly common. Such assessments are often conducted at the species level and focused primarily on the magnitude of anticipated climate change (i.e., climate exposure). However, wildlife management would benefit from population-level assessments that also incorporate measures of local or regional potential for organismal adaptation to change. Estimates of genetic diversity, gene flow, and landscape connectivity can address this need and complement climate exposure estimates to establish management priorities at broad to local scales. We provide an example of this holistic approach for desert bighorn sheep ( Ovis canadensis nelsoni ) within and surrounding lands administered by the U.S. National Park Service. We used genetic and environmental data from 62 populations across the southwestern U.S. to delineate genetic structure, evaluate relationships between genetic diversity and isolation, and estimate relative climate vulnerability for populations as a function of five variables associated with species’ responses to climate change: genetic diversity, genetic isolation, geographic isolation, forward climate velocity within a population’s habitat patch (a measure of geographic movement rate required for an organism to maintain constant climate conditions), and maximum elevation within the habitat patch (a measure of current climate stress, as lower maximum elevation is associated with higher temperature, lower precipitation, and lower population persistence). Genetic structure analyses revealed a high-level division between populations in southeastern Utah and populations in the remainder of the study area, which were further differentiated into four lower-level genetic clusters. Genetic diversity decreased with population isolation, whereas genetic differentiation increased, but these patterns were stronger for native populations than for translocated populations. Populations exhibited large variation in predicted vulnerability across the study area with respect to all variables, but native populations occupying relatively intact landscapes, such as Death Valley and Grand Canyon national parks, had the lowest overall vulnerability. These results provide local and regional context for conservation and management decisions regarding bighorn populations in a changing climate. Our study further demonstrates how assessments combining multiple factors could allow a more integrated response, such as increasing efforts to maintain connectivity and thus potential for adaptation in areas experiencing rapid climate change.

Arizona, California, Nevada, Utah↗
USGS2011

Development of a pan-Arctic monitoring plan for polar bears: Background paper

Polar bears (Ursus maritimus), by their very nature, and the extreme, remote environment in which they live, are inherently difficult to study and monitor. Monitoring polar bear populations is both arduous and costly and, to be effective, must be a long-term commitment. There are few jurisdictional governments and management boards with a mandate for polar bear research and management, and many have limited resources. Although population monitoring of polar bears has been a focus to some degree within most jurisdictions around the Arctic, of the 19 subpopulations recognised by the IUCN/Species Survival Commission Polar Bear Specialist Group (PBSG), adequate scientific trend data exist for only three of the subpopulations, fair trend data for five and poor or no trend data for the remaining 11 subpopulations (PBSG 2010a). There are especially critical knowledge gaps for the subpopulations in East Greenland, in the Russian Kara and Laptev seas, and in the Chukchi Sea, which is shared between Russia and the United States. The range covered by these subpopulations represents a third of the total area (approx. 23 million km2) of polar bears’ current range, and more than half if the Arctic Basin is included. If we use popular terms, we know close to nothing about polar bears in this portion of their range. As summer sea-ice extent, and to a lesser degree, spring-time extent, continues to retreat, outpacing model forecasts (Stroeve et al. 2007, Pedersen et al. 2009), polar bears face the challenge of adapting to rapidly changing habitats. There is a need to use current and synthesised information across the Arctic, and to develop new methods that will facilitate monitoring to generate new knowledge at a pan-Arctic scale. The circumpolar dimension can be lost when efforts are channelled into regional monitoring. Developing and implementing a plan that harmonises local, regional and global efforts will increase our power to detect and understand important trends for polar bears, with particular emphasis on how climate warming may differentially affect populations and habitats. Current knowledge is inadequate for a comprehensive understanding of the present and future impact of climate warming and its interaction with other stressors. The cumulative effects are unknown (Laidre et al. 2008). An integrated pan-Arctic research and monitoring plan will improve the ability to detect future trends, identify the most vulnerable subpopulations and guide effective conservation. There is a need to direct attention and resources where data are deficient to understand the mechanisms that drive trends, and to facilitate more effective and timely conservation response.

Report↗
USGS2026

Incorporating data sets with multiple sources of uncertainty in integrated species distribution models

Data integration methods aim to improve species distribution estimates by incorporating multiple sources of uncertainty across datasets. Two major sources of uncertainty are: (1) variation in sampling effort across space and within datasets, and (2) variation in reliability associated with data collection protocols or timing among datasets. Our goal was to evaluate how different approaches to address these uncertainties influence predictive performance of integrated models. We modeled distributions of four bird species using three datasets that differed in sampling design. We examined three strategies to reduce uncertainty: (1) filtering data, (2) incorporating functions that account for uncertainty in observation models, and (3) varying how datasets are integrated into a single estimate. We first examine methods to account for variable effort in observations, focusing on both spatial differences in sampling intensity and effort given to a single observation record. We then examine approaches to account for data sets with differing reliability. Sampling effort was best addressed through conservative filtering, including spatial thinning and excluding observations with highly variable effort. Next, we considered how to account for potential false positive detections—due to either misidentification or changes in distributions. We found that treating less reliable data as a covariate, an approach previously suggested for data integration that can greatly speed up model fitting, performed well. Other effective approaches included directly modeling false positive rates and complete exclusion of less reliable data sets. Our results provide insights into best practices in integrated modeling for handling uncertainty in integrated models. We demonstrate the flexible options available when using integrated models to address uncertainty.

Pennsylvania↗
USGS2023

Decision science as a framework for combining geomorphological and ecological modeling for the management of coastal systems

The loss of ecosystem services due to climate change and coastal development is projected to have significant impacts on local economies and conservation of natural resources. Consequently, there has been an increase in coastal management activities such as living shorelines, oyster reef restoration, marsh restoration, beach and dune nourishment, and revegetation projects. Coastal management decisions are complex and include challenging trade-offs. Decision science offers a useful framework to address such complex problems. Here, we provide a synthesis about how decision science can help to integrate research from multiple disciplines (physical and life sciences) with management of coastal and marine systems. Specifically, we discuss the importance of considering concepts and techniques from ecology, coastal geology, geomorphology, climate science, oceanography, and decision analysis when developing conservation plans for coastal restoration. We illustrate the process with several coastal restoration studies. Our capstone example is based on a recent barrier island restoration assessment project at Dauphin Island, Alabama, which included the development of geomorphological and ecological models. We show how decision science can be used as a framework to combine geomorphological and ecological modeling to help inform management decisions while considering uncertainty about system changes and risk tolerance. We also build on our examples through a review of recently developed techniques for spatial conservation planning for land acquisition decisions and the application of adaptive management for sequential decisions.

Alabama↗
USGS2017

An integrated data model to estimate spatiotemporal occupancy, abundance, and colonization dynamics

Ecological invasions and colonizations occur dynamically through space and time. Estimating the distribution and abundance of colonizing species is critical for efficient management or conservation. We describe a statistical framework for simultaneously estimating spatiotemporal occupancy and abundance dynamics of a colonizing species. Our method accounts for several issues that are common when modeling spatiotemporal ecological data including multiple levels of detection probability, multiple data sources, and computational limitations that occur when making fine-scale inference over a large spatiotemporal domain. We apply the model to estimate the colonization dynamics of sea otters ( Enhydra lutris ) in Glacier Bay, in southeastern Alaska.

Ecology↗
USGS2025

Integrating multiple indices of habitat quality to inform habitat management for a sagebrush indicator species

Robust science is needed to inform national resource management and policy decisions. Predictive species habitat maps are frequently employed in conservation decision-making but are often based on a single metric representing habitat quality. We outlined a framework that combines multiple spatially explicit indices of potential habitat quality that could be used to identify and prioritize habitat management areas, using the greater sage-grouse ( Centrocercus urophasianus ; hereafter sage-grouse) as an example species. Due to large-scale changes in sagebrush ecosystems, sage-grouse have suffered significant population declines in recent decades and have become key to land management plans throughout the western United States, where comprehensive habitat maps are crucial to effective conservation efforts. We evaluated habitat selection and survival patterns of sage-grouse across six distinct annual life stages and seasons to generate predictive habitat map surfaces, mapped the distribution of current occupancy, and combined maps of potential selection and survival patterns with space use and occupancy indices to delineate example habitat management categories. Our approach facilitates identification of priority areas to target for habitat preservation and areas where anthropogenic impacts could occur with likely minimal impact to the species. Overall, by combining indices representing selection, survival, and current occupancy, we provide a framework to allow for a flexible and targeted management approach that could be adapted to a wide variety of species.

California, Nevada↗
USGS2018

Integrative taxonomy resolves taxonomic uncertainty for freshwater mussels being considered for protection under the U.S. Endangered Species Act

Objectively delimiting species boundaries remains an important challenge in systematics and becomes urgent when unresolved taxonomy complicates conservation and recovery efforts. We examined species boundaries in the imperiled freshwater mussel genus Cyclonaias (Bivalvia: Unionidae) using morphometrics, molecular phylogenetics, and multispecies coalescent models to help guide pending conservation assessments and legislative decisions. Congruence across multiple lines of evidence indicated that current taxonomy overestimates diversity in the C. pustulosa species complex. The only genetically and morphologically diagnosable species in the C. pustulosa species complex were C. pustulosa and C. succissa and we consider C. aurea , C. houstonensis, C. mortoni , and C. refulgens to be synonyms of C. pustulosa . In contrast, all three species in the C. nodulata complex ( C. necki , C. nodulata , and C. petrina ) were genetically, geographically, and morphologically diagnosable. Our findings have important conservation and management implications, as three nominal species ( C. aurea , C. houstonensis , and C. petrina ) are being considered for protection under the Endangered Species Act.

Scientific Reports↗
USGS2015

Estimating golden-cheeked warbler immigration: Implications for the spatial scale of conservation

Understanding the factors that drive population dynamics is fundamental to species conservation and management. Since the golden-cheeked warbler S etophaga chrysoparia was first listed as endangered, much effort has taken place to monitor warbler abundance, occupancy, reproduction and survival. Yet, despite being directly related to local population dynamics, movement rates have not been estimated for the species. We used an integrated population model to investigate the relationship between immigration rate, fledging rate, survival probabilities and population growth rate for warblers in central Texas, USA. Furthermore, using a deterministic projection model, we examined the response required by vital rates to maintain a viable population across varying levels of immigration. Warbler abundance fluctuated with an overall positive trend across years. In the absence of immigration, the abundance would have decreased. However, the population could remain viable without immigration if both adult and juvenile survival increased by almost half or if juvenile survival more than doubled. We also investigated the response required by fledging rates across a range of immigration in order to maintain a viable population. Overall, we found that immigration was required to maintain warbler target populations, indicating that warbler conservation and management programs need to be implemented at larger spatial scales than current efforts to be effective. This study also demonstrates that by using limited data within integrated population models, biologists are able to monitor multiple key demographic parameters simultaneously to gauge the efficacy of strategies designed to maximize warbler viability in a changing landscape.

Animal Conservation↗