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At least 415 records · Page 23Linked to original sources

USGS1978

Preservation of cycad and Ginkgo pollen

Pollen grains of Ginkgo, Cycas, and Encephalartos were chemically treated together with pollen of Quercus, Alnus, and Pinus, the latter three genera being used as standards. The experiments showed that: (1) boiling the pollen for 8-10 hours in 10% KOH had little if any effect on any of the grains; (2) lengthy acetolysis treatment produced some degradation or corrosion, particularly in Ginkgo and Cycas, but the grains of even these genera remained easily recognizable; (3) oxidation with KMnO4 followed by H2O2 showed that pollen of Ginkgo, Cycas, and Encephalartos remains better preserved than that of Quercus and Alnus, and although Ginkgo and Encephalartos probably are slightly less resistant to oxidation than Pinus, no great differences exists between these monosulcate types and Pinus. Thus the experiments show that, at least for sediments low in bacteria, cycad and Ginkgo pollen should be well represented in the fossil record as far as their preservational capabilities are concerned. ?? 1978.

Review of Palaeobotany and Palynology↗

USGS1991

Steady- and non-steady-state carbonate-silicate controls on atmospheric CO2

Two contrasting hypotheses have recently been proposed for the past long-term relation between atmospheric CO 2 and the carbonate-silicate geochemical cycle. One approach (Berner, 1990) suggests that CO 2 levels have varied in a manner that has maintained chemical weathering and carbonate sedimentation at a steady state with respect to tectonically controlled decarbonation reactions. A second approach (Raymo et al. , 1988), applied specificlly to the late Cenozoic, suggests a decrease in CO 2 caused by an uplift-induced increase in chemical weathering, without regard to the rate of decarbonation. According to the steady-state (first) hypothesis, increased weathering and carbonate sedimentation are generally associated with increasing atmospheric CO 2 , whereas the uplift (second) hypothesis implies decreasing CO 2 under the same conditions. An ocean-atmosphere-sediment model has been used to assess the response of atmospheric CO 2 and carbonate sedimentation to global perturbations in chemical weathering and decarbonation reactions. Although this assessment is theoretical and cannot yet be related to the geologic record, the model simulations compare steady-state and non-steady-state carbonate-silicate cycle response. The e-fold response time of the ‘CO 2 -weathering’ feedback mechanism is between 300 and 400 ka. The response of carbonate sedimentation is much more rapid. These response times provide a measure of the strength of steady-state assumptions, and imply that certain systematic relations are sustained throughout steady-state and non-steady-state scenarios for the carbonate-silicate cycle. The simulations suggest that feedbacks can maintain the system near a steady state, but that non-steady-state effects may contribute to long-term trends. The steady-state and uplift hypotheses are not necessarily incompatible over time scales of a few million years.

Quaternary Science Reviews↗

USGS2007

Thermal Methods for Investigating Ground-Water Recharge

Recharge of aquifers within arid and semiarid environments is defined as the downward flux of water across the regional water table. The introduction of recharging water at the land surface can occur at discreet locations, such as in stream channels, or be distributed over the landscape, such as across broad interarroyo areas within an alluvial ground-water basin. The occurrence of recharge at discreet locations is referred to as focused recharge, whereas the occurrence of recharge over broad regions is referred to as diffuse recharge. The primary interest of this appendix is focused recharge, but regardless of the type of recharge, estimation of downward fluxes is essential to its quantification. Like chemical tracers, heat can come from natural sources or be intentionally introduced to infer transport properties and aquifer recharge. The admission and redistribution of heat from natural processes such as insolation, infiltration, and geothermal activity can be used to quantify subsurface flow regimes. Heat is well suited as a ground-water tracer because it provides a naturally present dynamic signal and is relatively harmless over a useful range of induced perturbations. Thermal methods have proven valuable for recharge investigations for several reasons. First, theoretical descriptions of coupled water-and-heat transport are available for the hydrologic processes most often encountered in practice. These include land-surface mechanisms such as radiant heating from the sun, radiant cooling into space, and evapotranspiration, in addition to the advective and conductive mechanisms that usually dominate at depth. Second, temperature is theoretically well defined and readily measured. Third, thermal methods for depths ranging from the land surface to depths of hundreds of meters are based on similar physical principles. Fourth, numerical codes for simulating heat and water transport have become increasingly reliable and widely available. Direct measurement of water flux in the subsurface is difficult, prompting investigators to pursue indirect methods. Geophysical approaches that exploit the coupled relation between heat and water transport provide an attractive class of methods that have become widely used in investigations of recharge. This appendix reviews the application of heat to the problem of recharge estimation. Its objective is to provide a fairly complete account of the theoretical underpinnings together with a comprehensive review of thermal methods in practice. Investigators began using subsurface temperatures to delineate recharge areas and infer directions of ground-water flow around the turn of the 20th century. During the 1960s, analytical and numerical solutions for simplified heat- and fluid-flow problems became available. These early solutions, though one-dimensional and otherwise restricted, provided a strong impetus for applying thermal methods to problems of liquid and vapor movement in systems ranging from soils to geothermal reservoirs. Today?s combination of fast processors, massive data-storage units, and efficient matrix techniques provide numerical solutions to complex, three-dimensional transport problems. These approaches allow researchers to take advantage of the considerable information content routinely achievable in high-accuracy temperature work.

Professional Paper↗

USGS2011

Review of samples of tailings, soils, and stream sediments adjacent to and downstream from the Ruth Mine, Inyo County, California

The Ruth Mine and mill are located in the western Mojave Desert in Inyo County, California (fig. 1). The mill processed gold-silver (Au-Ag) ores mined from the Ruth Au-Ag deposit, which is adjacent to the mill site. The Ruth Au-Ag deposit is hosted in Mesozoic intrusive rocks and is similar to other Au-Ag deposits in the western Mojave Desert that are associated with Miocene volcanic centers that formed on a basement of Mesozoic granitic rocks (Bateman, 1907; Gardner, 1954; Rytuba, 1996). The volcanic rocks consist of silicic domes and associated flows, pyroclastic rocks, and subvolcanic intrusions (fig. 2) that were emplaced into Mesozoic silicic intrusive rocks (Troxel and Morton, 1962). The Ruth Mine is on Federal land managed by the U.S. Bureau of Land Management (BLM). Tailings from the mine have been eroded and transported downstream into Homewood Canyon and then into Searles Valley (figs. 3, 4, 5, and 6). The BLM provided recreational facilities at the mine site for day-use hikers and restored and maintained the original mine buildings in collaboration with local citizen groups for use by visitors (fig. 7). The BLM requested that the U.S. Geological Survey (USGS), in collaboration with Chapman University, measure arsenic (As) and other geochemical constituents in soils and tailings at the mine site and in stream sediments downstream from the mine in Homewood Canyon and in Searles Valley (fig. 3). The request was made because initial sampling of the site by BLM staff indicated high concentrations of As in tailings and soils adjacent to the Ruth Mine. This report summarizes data obtained from field sampling of mine tailings and soils adjacent to the Ruth Mine and stream sediments downstream from the mine on June 7, 2009. Our results permit a preliminary assessment of the sources of As and associated chemical constituents that could potentially impact humans and biota.

California↗

USGS2009

Coastal Circulation and Sediment Dynamics in War-in-the-Pacific National Historical Park, Guam; measurements of waves, currents, temperature, salinity, and turbidity, June 2007-January 2008

Flow in and around coral reefs affects a number of physical, chemical and biologic processes that influence the health and sustainability of coral reef ecosystems. These range from the residence time of sediment and contaminants to nutrient uptake and larval retention and dispersal. As currents approach a coast they diverge to flow around reef structures, causing high horizontal and vertical shear. This can result in either the rapid advection of material in localized jets, or the retention of material in eddies that form in the lee of bathymetric features. The high complexity and diversity both within and between reefs, in conjunction with past technical restrictions, has limited our understanding of the nature of flow and the resulting flux of physical, chemical, and biologic material in these fragile ecosystems. Sediment, nutrients, and other pollutants from a variety of land-based activities adversely impact many coral reef ecosystems in the U.S. and around the world. These pollutants are transported in surface water runoff, groundwater seepage, and atmospheric fallout into coastal waters, and there is compelling evidence that the sources have increased globally as a result of human-induced changes to watersheds. In Guam, and elsewhere on U.S. high islands in the Pacific and Caribbean, significant changes in the drainage basins due to agriculture, feral grazing, fires, and urbanization have in turn altered the character and volume of land-based pollution released to coral reefs. Terrigenous sediment run-off (and the associated nutrients and contaminants often absorbed to it) and deposition on coral reefs are recognized to potentially have significant impact on coral health by blocking light and inhibiting photosynthesis, directly smothering and abrading coral, and triggering increases in macro algae. Studies that combine information on watershed, surface water- and groundwater-flow, transport and fate of sediment and other pollutants in the reef environment, and their impact on reef health and ecology are essential for effective reef management. Two of the main anthropogenic activities along west-central Guam's coastline that may impact the region's coral reef ecosystems include pollution and coastal land use/development, as discussed in the review by Porter and others (2005). The pollution threats include point-sources, such as municipal wastewater (Northern District, Hagatna, Naval Station Guam, and Agat-Santa Rita Waster Water Treatment Plants), cooling water (Tanguisson Steam and Cabras Power Plants), and numerous storm water, ballast water, and tank bottom draw outfalls; nonpoint sources include septic systems, urban runoff, illegal dumping, and groundwater discharges. Poor land-use practices include development without the use of runoff management measures, increased areal extent of impervious surfaces and decreased extent of vegetative barriers, and recreational off-road vehicle use. Furthermore, feral ungulates and illegal wildfires remove protective vegetative cover and generally result in increased soil erosion. While anthropogenic point-sources have been reduced in many areas due to better management practices, nonpoint sources have either stayed constant or increased. Between 1975 and 1999, it is estimated that Guam lost more than a quarter of its tree cover, and more than 750 wildfires each year have resulted in a greater proportion of badlands and other erosion-prone land surfaces with high erosion rates (Forestry and Soil Resources Division, 1999). Approximately 1.8 square kilometers (km2) of Asan Bay, west-central Guam, lies within the National Park Service's (NPS) War-in-the-Pacific National Historical Park's (WAPA) Asan Unit; the bay is the sink for material coming out of the Asan watershed. Anthropogenic modifications of the watersheds adjacent to Asan Bay, which include intentionally-set wildfires, construction, and agriculture (Minton, 2005), are believed to have increased over the past 25

Open-File Report↗

USGS2002

Ground water near Pella and in selected parts of Jasper, Mahaska and Marion Counties, Iowa

The U.S. Geological Survey, in cooperation with the city of Pella, Iowa, conducted a study of the ground-water resources in selected parts of Jasper, Mahaska, and Marion Counties near Pella, Iowa, during 2000–01. The purpose of the study was to describe the ground-water resources in the Pella, Iowa, area. Following a review of available hydrologic and geologic information, the study focused on investigating the alluvial deposits along the South Skunk River within a 10-mile radius of the city of Pella. Thickness, lithologic, and water-quality data for the alluvial deposits in the South Skunk River Valley were collected at selected sites from August 2000 through July 2001. The South Skunk River alluvial aquifer near Pella consists of stratified deposits of sand and gravel of glacial and fluvial origin. The upper 15 to 20 feet of the alluvial deposits are interbedded with flood-plain clay and silt lenses and are overlain by a developed soil horizon. The alluvial aquifer is underlain by a thin (less than 50 feet thick) layer of glacial drift. Glacial drift, as it is defined in the study area, is a heterogeneous, unsorted, unstratified, unconsolidated, relatively impermeable deposit consisting of clay, sand, and gravel. The bedrock surface beneath the glacial drift consists primarily of shale and limestone of Pennsylvanian or Mississippian age. The alluvial sand and gravel deposits along the South Skunk River near Pella range from less than 30 to more than 80 feet thick. Saturated thickness of the alluvial aquifer ranges from 15 to about 70 feet. Water-quality samples were collected from four observation wells installed in the South Skunk River alluvial aquifer in the study area. Results of the water-quality sampling show that the chemical quality of the ground water is generally similar at all of the sampling sites. All ground-water samples were low in dissolved oxygen, which resulted in high concentrations of iron and manganese and reduced forms of nitrogen.

Iowa↗

USGS1951

Summary of the research work of the Trace Elements Section, Geochemistry and Petrology Branch, for the period April 1, 1948-December 31, 1950

This report summarizes the research work of the Trace Elements Section, Geochemistry and Petrology Branch, from the organization of the Section in April 1948 to December 31, 1950. The research undertaken thus far consists of laboratory and related field studies in the following fields: 1. Mineralogic and petrologic investigations of radioactive rocks, minerals, and ores. 2. Investigations of chemical methods of analysis for uranium, thorium, and other elements and compounds in radioactive materials, and related chemical problems. 3. Investigations of spectrographic methods of analysis for a wide variety of elements in radioactive materials. 4. Investigations of radiometric methods of analysis as applied to radioactive materials. It should be emphasized that the work undertaken thus far, described under the headings "Future work", is almost entirely in the nature of investigations supporting the field appraisal of known important uraniferous deposits. A comprehensive program of more fundamental research was submitted in April 1949 in a report entitled "Proposed program of desirable research in the geochemistry of uranium," but funds for this work have not been authorized. It is hoped, however, that funds to support basic research of the type indicated in that report may be available in the future. This report does not cover the analytical work of the Section nor the public-sample program. The analytical work has been summarized for the fiscal year 1950 in the report, "Numerical summary of the analytical work of the Trace Elements Section, Geochemistry and Petrology Branch, for the fiscal year 1950," by John C. Rabbit, U.S. Geol. Survey Trace Elements Memorandum Rept. 174, October 1950. A report on the public-sample program is in preparation. Much of the material in this report has been paraphrased from reports prepared by members of the Section. My special thanks are due them; to Earl Ingerson, chief of the Geochemistry and Petrology Branch of the Survey, for his critical review; to my secretary, Marie Woolihan, for her aid in collecting material; and to Virginia Layne of the editorial staff of the Section for typing the manuscript and the multilith mats.

Trace Elements Investigations↗

USGS2009

Pilot studies for the North American Soil Geochemical Landscapes Project - Site selection, sampling protocols, analytical methods, and quality control protocols

In 2004, the US Geological Survey (USGS) and the Geological Survey of Canada sampled and chemically analyzed soils along two transects across Canada and the USA in preparation for a planned soil geochemical survey of North America. This effort was a pilot study to test and refine sampling protocols, analytical methods, quality control protocols, and field logistics for the continental survey. A total of 220 sample sites were selected at approximately 40-km intervals along the two transects. The ideal sampling protocol at each site called for a sample from a depth of 0-5 cm and a composite of each of the O, A, and C horizons. The <2-mm fraction of each sample was analyzed for Al, Ca, Fe, K, Mg, Na, S, Ti, Ag, As, Ba, Be, Bi, Cd, Ce, Co, Cr, Cs, Cu, Ga, In, La, Li, Mn, Mo, Nb, Ni, P, Pb, Rb, Sb, Sc, Sn, Sr, Te, Th, Tl, U, V, W, Y, and Zn by inductively coupled plasma-mass spectrometry and inductively coupled plasma-atomic emission spectrometry following a near-total digestion in a mixture of HCl, HNO 3 , HClO 4 , and HF. Separate methods were used for Hg, Se, total C, and carbonate-C on this same size fraction. Only Ag, In, and Te had a large percentage of concentrations below the detection limit. Quality control (QC) of the analyses was monitored at three levels: the laboratory performing the analysis, the USGS QC officer, and the principal investigator for the study. This level of review resulted in an average of one QC sample for every 20 field samples, which proved to be minimally adequate for such a large-scale survey. Additional QC samples should be added to monitor within-batch quality to the extent that no more than 10 samples are analyzed between a QC sample. Only Cr (77%), Y (82%), and Sb (80%) fell outside the acceptable limits of accuracy (% recovery between 85 and 115%) because of likely residence in mineral phases resistant to the acid digestion. A separate sample of 0-5-cm material was collected at each site for determination of organic compounds. A subset of 73 of these samples was analyzed for a suite of 19 organochlorine pesticides by gas chromatography. Only three of these samples had detectable pesticide concentrations. A separate sample of A-horizon soil was collected for microbial characterization by phospholipid fatty acid analysis (PLFA), soil enzyme assays, and determination of selected human and agricultural pathogens. Collection, preservation and analysis of samples for both organic compounds and microbial characterization add a great degree of complication to the sampling and preservation protocols and a significant increase to the cost for a continental-scale survey. Both these issues must be considered carefully prior to adopting these parameters as part of the soil geochemical survey of North America.

Applied Geochemistry↗

USGS2013

Water-quality characteristics, trends, and nutrient and sediment loads of streams in the Treyburn development area, North Carolina, 1988–2009

Streamflow and water-quality data, including concentrations of nutrients, metals, and pesticides, were collected from October 1988 through September 2009 at six sites in the Treyburn development study area. A review of water-quality data for streams in and near a 5,400-acre planned, mixed-use development in the Falls Lake watershed in the upper Neuse River Basin of North Carolina indicated only small-scale changes in water quality since the previous assessment of data collected from 1988 to 1998. Loads and yields were estimated for sediment and nutrients, and temporal trends were assessed for specific conductance, pH, and concentrations of dissolved oxygen, suspended sediment, and nutrients. Water-quality conditions for the Little River tributary and Mountain Creek may reflect development within these basins. The nitrogen and phosphorus concentrations at the Treyburn sites are low compared to sites nationally. The herbicides atrazine, metolachlor, prometon, and simazine were detected frequently at Mountain Creek and Little River tributary but concentrations are low compared to sites nationally. Little River tributary had the lowest median suspended-sediment yield over the 1988–2009 study period, whereas Flat River tributary had the largest median yield. The yields estimated for suspended sediment and nutrients were low compared to yields estimated for other basins in the Southeastern United States. Recent increasing trends were detected in total nitrogen concentration and suspended-sediment concentrations for Mountain Creek, and an increasing trend was detected in specific conductance for Little River tributary. Decreasing trends were detected in dissolved nitrite plus nitrate nitrogen, total ammonia plus organic nitrogen, sediment, and specific conductance for Flat River tributary. Water chemical concentrations, loads, yields, and trends for the Treyburn study sites reflect some effects of upstream development. These measures of water quality are generally low, however, compared to regional and national averages.

North Carolina↗

USGS2002

Visualization of Flow Alternatives, Lower Missouri River

Background The U.S. Army Corps of Engineers (COE) 'Missouri River Master Water Control Manual' (Master Manual) review has resulted in consideration of many flow alternatives for managing the water in the river (COE, 2001; 1998a). The purpose of this report is to present flow-management alternative model results in a way that can be easily visualized and understood. This report was updated in October 2001 to focus on the specific flow-management alternatives presented by the COE in the 'Master Manual Revised Draft Environmental Impact Statement' (RDEIS; COE, 2001). The original version (February 2000) is available by clicking here. The COE, U.S. Fish and Wildlife Service (FWS), Missouri River states, and Missouri River basin tribes have been participating in discussions concerning water management of the Missouri River mainstem reservoir system (MRMRS), the Missouri River Bank Stabilization and Navigation Project, and the Kansas River reservoir system since 1986. These discussions include general input to the revision of the Master Manual as well as formal consultation under Section 7 of the Endangered Species Act. In 2000, the FWS issued a Biological Opinion that prescribed changes to reservoir management on the Missouri River that were believed to be necessary to preclude jeopardy to three endangered species, the pallid sturgeon, piping plover, and interior least tern (USFWS, 2000). The combined Missouri River system is large and complex, including many reservoirs, control structures, and free-flowing reaches extending over a broad region. The ability to assess future impacts of altered management scenarios necessarily involves complex, computational models that attempt to integrate physical, chemical, biological, and economic effects. Graphical visualization of the model output is intended to improve understanding of the differences among flow-management alternatives.

Colorado, Iowa, Kansas, Missouri, Montana, Nebrask↗

USGS1997

Recommended nomenclature for zeolite minerals: report of the subcommittee on zeolites of the International Mineralogical Association, Commission on new Minerals and Mineral names

This report embodies recommendations on zeolite nomenclature approved by the International Mineralogical Association, Commission on New Minerals and Mineral Names. In a working definition of a zeolite mineral used for this review, structures containing an interrupted framework of tetrahedra are accepted where other zeolitic properties prevail, and complete substitution by elements other than Si and Al is allowed. Separate species are recognized in topologically distinctive compositional series in which different extra-framework cations are the most abundant in atomic proportions. To name these, the appropriate chemicalsymbol is attached by a hyphen to the series name as a suffix, except for the names harmotome, pollucite and wairakite in the phillipsite and analcime series. Differences in space-group symmetry and in order-disorder relationships in zeolites having the same topologically distinctive framework do not in general provide adequate grounds for recognition of separate species. Zeolite species are not to be distinguished solely on the ratio Si:Al except for heulandite (Si:Al < 4.0) and clinoptilolite (Si:Al ??? 4.0). Dehydration, partial hydration, and overhydration are not sufficient grounds for the recognition of separate species of zeolites. Use of the term 'ideal formula' should be avoided in referring to a simplified or averaged formula of a zeolite. newly recognized species in compositional series are as follows: brewsterite-Sr, -Ba, chabazite-Ca, -Na, -K, clinoptilolite-K, -Na, -Ca, dachiardite-Ca, -Na, erionite-Na, erionite-Na, -K, -Ca, faujasite-Na, -Ca, -Mg, ferrierite-Mg, -K, -Na, gmelinite-Na, -Ca, -K, heulandite-Ca, -Na, -K, -Sr, levyne-Ca, -Na, paulingite-K, -Ca, phillipsite-Na, -Ca, -K, and stilbite-Ca, -Na. Key references, type locality, origin of name, chemical data, IZA structure-type symbols, space-group symmetry, unit-cell dimensions, and comments on structure are listed for 13 compositional series, 82 accepted zeolite mineral species, and three of doubtful status. Herschelite, leonhardite, dvetlozarite, and wellsite are discredited as mineral species names. Obsolete and discredited names are listed.

Canadian Mineralogist↗

USGS2011

Setting limits: Using air pollution thresholds to protect and restore U.S. ecosystems

More than four decades of research provide unequivocal evidence that sulfur, nitrogen, and mercury pollution have altered, and will continue to alter, our nation's lands and waters. The emission and deposition of air pollutants harm native plants and animals, degrade water quality, affect forest productivity, and are damaging to human health. Many air quality policies limit emissions at the source but these control measures do not always consider ecosystem impacts. Air pollution thresholds at which ecological effects are observed, such as critical loads, are effective tools for assessing the impacts of air pollution on essential ecosystem services and for informing public policy. U.S. ecosystems can be more effectively protected and restored by using a combination of emissions-based approaches and science-based thresholds of ecosystem damage. Based on the results of a comprehensive review of air pollution thresholds, we conclude: ??? Ecosystem services such as air and water purification, decomposition and detoxification of waste materials, climate regulation, regeneration of soil fertility, production and biodiversity maintenance, as well as crop, timber and fish supplies are impacted by deposition of nitrogen, sulfur, mercury and other pollutants. The consequences of these changes may be difficult or impossible to reverse as impacts cascade throughout affected ecosystems. ??? The effects of too much nitrogen are common across the U.S. and include altered plant and lichen communities, enhanced growth of invasive species, eutrophication and acidification of lands and waters, and habitat deterioration for native species, including endangered species. ??? Lake, stream and soil acidification is widespread across the eastern United States. Up to 65% of lakes within sensitive areas receive acid deposition that exceeds critical loads. ??? Mercury contamination adversely affects fish in many inland and coastal waters. Fish consumption advisories for mercury exist in all 50 states and on many tribal lands. High concentrations of mercury in wildlife are also widespread and have multiple adverse effects. ??? Air quality programs, such as those stemming from the 1990 Clean Air Act Amendments, have helped decrease air pollution even as population and energy demand have increased. Yet, they do not adequately protect ecosystems from long-term damage. Moreover they do not address ammonia emissions. ??? A stronger ecosystem basis for air pollutant policies could be established through adoption of science-based thresholds. Existing monitoring programs track vital information needed to measure the response to policies, and could be expanded to include appropriate chemical and biological indicators for terrestrial and aquatic ecosystems and establishment of a national ecosystem monitoring network for mercury. The development and use of air pollution thresholds for ecosystem protection and management is increasing in the United States, yet threshold approaches remain underutilized. Ecological thresholds for air pollution, such as critical loads for nitrogen and sulfur deposition, are not currently included in the formal regulatory process for emissions controls in the United States, although they are now considered in local management decisions by the National Park Service and U.S. Forest Service. Ecological thresholds offer a scientifically sound approach to protecting and restoring U.S. ecosystems and an important tool for natural resource management and policy. ?? The Ecological Society of America.

Issues in Ecology↗

USGS2009

Diffusion-equation representations of landform evolution in the simplest circumstances: Appendix C

The diffusion equation is one of the three great partial differential equations of classical physics. It describes the flow or diffusion of heat in the presence of temperature gradients, fluid flow in porous media in the presence of pressure gradients, and the diffusion of molecules in the presence of chemical gradients. [The other two equations are the wave equation, which describes the propagation of electromagnetic waves (including light), acoustic (sound) waves, and elastic (seismic) waves radiated from earthquakes; and LaPlace’s equation, which describes the behavior of electric, gravitational, and fluid potentials, all part of potential field theory. The diffusion equation reduces to LaPlace’s equation at steady state, when the field of interest does not depend on t. Poisson’s equation is LaPlace’s equation with a source term.] Joseph Fourier developed the diffusion equation for heat conduction in 1807, and it has significant associations with probability theory (Narasimhan, 2009), as we will see shortly. In a novel and fascinating application, Gene Humphreys has employed solutions of the diffusion equation to describe the density of desert tortoises in the presence of population gradients caused by new dirt roads cut in the Mojave Desert. These new dirt roads induce an immediate line sink for unsuspecting tortoises. As of this writing in early September, I am not sure whether Gene has published this work. Most of us here know that the diffusion equation has also been used to describe the evolution through time of scarp-like landforms, including fault scarps, shoreline scarps, or a set of marine terraces. The methods, models, and data employed in such studies have been described in the literature many times over the past 25 years. For most situations, everything you will ever need (or want) to know can be found in Hanks et al. (1984) and Hanks (2000), the latter being a review of numerous studies of the 1980s and 1990s and a summary of available estimates of the mass diffusivity κ. The geometric parameterization of scarp-like landforms is shown in Figure 1.

Book↗

USGS2023

Achieving water quality goals in the Chesapeake Bay: A comprehensive evaluation of system response

A Comprehensive Evaluation of System Response Achieving Water Quality Goals in the Chesapeake Bay: A Comprehensive Evaluation of System Response (CESR) includes an evaluation of why progress toward meeting the TMDL and water quality standards has been slower than expected and offers options for how progress can be accelerated. This report is a summation of a three year investigation into the 40 year effort to reduce nutrient loads to Chesapeake Bay. History The effort began as a STAC independent initiative in March 2019, after Kurt Stephenson, Zach Easton, and Brian Benham proposed the idea of a report that would identify gaps and uncertainties in system response—physical, chemical, biological, and socioeconomic—that impact efforts designed to attain water quality standards in Chesapeake Bay. As STAC Chair at the time, Benham facilitated the development of a collaborative process that would engage the entire committee. As a first step in approaching the long causal chain that links management actions to their eventual impact on water quality and living resources, workgroups were formed around the subsystems of this chain: nutrient and sediment reductions (watershed), water quality response to nutrient and sediment reductions (estuary) and living resource response to water quality (living resources). Each of these workgroups generated an independent document with a self-determined scope (i.e., workgroups were afforded flexibility to address issues beyond the original objectives). Because the content of each document was both unique and substantial, STAC chose to publish them as stand-alone documents with authorship attribution. In the second step, a steering committee developed a series of framing questions to guide the preparation of this report that would meet the objective of identifying gaps and uncertainties in achieving the Bay TMDL and water quality standards. Coeditors Stephenson and Wardrop, supported to great extent by a subgroup of the Steering Committee (Leonard Shabman, Zach Easton, Jeremy Testa, William Dennison, Kenny Rose, and Mark Monaco) were tasked with assembling ideas and contributions to write a single draft text, drawing material from the aforementioned resource documents, STAC and Chesapeake Bay Program reports, the scientific literature, and a limited amount of additional analyses performed in collaboration with Bay Program scientists. The resulting report was then submitted for several reviews by both steering committee members and the membership at-large to produce a consensus report.

Maryland, Virginia↗

USGS2003

USGS Alaska Tissue Archival Projects: An update on FY02 activities

The banking of environmental specimens under cryogenic conditions for future retrospective analysis has been recognized for many years as an important part of environmental monitoring programs. Since 1987, the Alaska Marine Mammal Tissue Archival Project (AMMTAP) has been collecting tissue samples from marine mammals for archival in the National Biomonitoring Specimen Bank (NBSB) at the National Institute of Standards and Technology (NIST) in Gaithersburg, Maryland, USA. The USGS, Alaska Biological Science Center (ABSC), the NOAA Fisheries, Office of Protected Resources (NMFS), and the NIST conduct this partnership project, which began under the Mineral Management Service (MMS) Outer Continental Shelf Environmental Assessment Program. MMS remains the primary client agency for the AMMTAP providing programmatic guidance and review. The purpose of the project is to collect tissue samples from Alaska marine mammals and to store these specimens under the best conditions so that they can be analyzed for environmental contaminants and other constituents. A substantial part of the sample collection is from Arctic species and, since most of the animals sampled are from Alaska Native subsistence harvests, the project relies on cooperation and collaboration with several Alaska Native organizations and local governmental agencies. Although a substantial amount of recent research has been conducted on contaminants in Alaskan marine mammals, few data exists on colonial seabirds nesting in Alaska. Like marine mammals, seabirds are an important group of upper trophic level marine organisms with a potential for accumulating lipophilic contaminants and are identified by MMS as species of interest for monitoring activities. More than 95% of the seabirds breeding in the continental United States nest at colonies in the Bering and Chukchi seas and Gulf of Alaska (see USFWS 1992). Realizing the value of colonial seabirds in environmental monitoring and the lack of recent data from Alaskan seabird colonies, the U.S. Fish and Wildlife Service Alaska Maritime National Wildlife Refuge (USFWS-AMNWR), the U.S. Geological Survey Biological Resources Division (USGS-BRD), and the National Institute of Standards and Technology (NIST) initiated the Seabird Tissue Archival and Monitoring Project (STAMP) in 1998. The project was designed as a 100-year-long program to monitor long-term trends in environmental quality by collecting eggs at nesting colonies using standardized protocols, banking the egg contents under conditions that ensure chemical stability during long-term (decadal) storage, and analyzing subsamples of the stored material to establish baseline levels for persistent bioaccumulative contaminants (e.g., chlorinated pesticides, PCBs, mercury).

Conference Paper↗

USGS2019

Control of invasive sea lampreys using the piscicides TFM and niclosamide: Toxicology, successes & future prospects

The invasion of the Laurentian Great Lakes of North America by sea lampreys ( Petromyzon marinus ) in the early 20th century contributed to the depletion of commercial, recreational and culturally important fish populations, devastating the economies of communities that relied on the fishery. Sea lamprey populations were subsequently controlled using an aggressive integrated pest-management program which employed barriers and traps to prevent sea lamprey from migrating to their spawning grounds and the use of the piscicides (lampricides) 3-trifluoromethyl-4-nitrophenol (TFM) and niclosamide to eliminate larval sea lampreys from their nursery streams. Although sea lampreys have not been eradicated from the Great Lakes, populations have been suppressed to less than 10% of their peak numbers in the mid-1900s. The ongoing use of lampricides provides the foundation for sea lamprey control in the Great Lakes, one of the most successful invasive species control programs in the world. Yet, significant gaps remain in our understanding of how lampricides are taken-up and handled by sea lampreys, how lampricides exert their toxic effects, and how they adversely affect non-target invertebrate and vertebrates species. In this review we examine what has been learned about the uptake, handling and elimination, and the mode of TFM and niclosamide toxicity in lampreys and in non-target animals, particularly in the last 10 years. It is now clear that the mode of TFM toxicity is the same in non-target fishes and lampreys, in which TFM interferes with oxidative phosphorylation by the mitochondria leading to decreased ATP production. Vulnerability to TFM is related to abiotic factors such as water pH and alkalinity, which we propose changes the relative amounts of the bioavailable un-ionized form of TFM in the gill microenvironment. Niclosamide, which is also a molluscicide used to control snails in areas prone to schistosomiasis infections of humans, also likely works by uncoupling oxidative phosphorylation, but less is known about other aspects of its toxicology. The effects of TFM include reductions in energy stores, particularly glycogen and high energy phosphagens. However, non-target fishes readily recover from sub-lethal TFM exposure as demonstrated by the rapid restoration of energy stores and clearance of TFM. Although both TFM and niclosamide are non-persistent in the environment and critical for sea lamprey control, increasing public and institutional concerns about pesticides in the environment makes it imperative to explore other means of sea lamprey control. Accordingly, we also address possible “next-generation” strategies of sea lamprey control including genetic tools such as RNA interference and CRISPR-Cas9 to impair critical physiological processes (e.g. reproduction, digestion, metamorphosis) in lamprey, and the use of green chemistry to develop more environmentally benign chemical methods of sea lamprey control.

Great Lakes↗

USGS2022

The protectiveness of aquatic life criteria for threatened or endangered aquatic species: Cadmium in California

In the United States, conflicts can arise between the processes to derive aquatic life criteria (ALC) for chemicals under the Clean Water Act (CWA) and the evaluation procedures used in Endangered Species Act (ESA) consultations on the protectiveness of those criteria for protected species. This paper examines the roots of, and possible reconciliation of, one longstanding conflict over cadmium aquatic life criteria in California. This case study includes 1) an overview of occurrences of cadmium in the aquatic environment, 2) factors affecting toxicity of cadmium to aquatic life, 3) a contrast between the analytical procedures of CWA aquatic life criteria derivation and ESA consultation, 4) quantitative estimates of no-effect concentrations of cadmium for 44 ESA listed species in comparison with updated aquatic life criteria, and 5) concludes with suggestions to update California’s aquatic life criteria for cadmium that would be more protective of sensitive ESA listed species. A root cause of conflict is the different levels of biological organization that are the focus of CWA and ESA procedures. The CWA ALC are intended to protect diverse ecosystems by protecting at least 95% of the species richness in communities, allowing that it is acceptable for some species in the residual most sensitive 5% of the community richness to be harmed or even locally extirpated so long as they are not societally important species. The ESA is charged with minimizing harm to individual organisms and disallows increasing risk of extinction or impeding recovery of protected species. With cadmium in California, these procedures converge because some of the most sensitive species to cadmium happen to be surrogates for protected species (acute responses of steelhead/rainbow trout, Oncorhynchus mykiss , and chronic responses of threespine stickleback, Gasterosteus aculeatus ). The present review concludes that while the superseded 1996 cadmium criteria versions would not be fully protective for up to half of the 44 ESA listed aquatic species in California, the updated 2016 versions would be more protective. Still, the review shows that the updated acute criteria would only fully protect the less sensitive half of the distribution of data for steelhead/rainbow trout sensitivity to cadmium, and the chronic criterion still would not protect the listed threespine stickleback. With a data rich species such as rainbow trout, instead of defining acute criteria using a central tendency statistic such as the geometric mean of multiple test responses, using a lower statistic such as the 10th percentile would ensure that the vast majority of a sensitive, protected species (and all less sensitive species) would be protected. Available data for the stickleback indicate it may be highly sensitive to cadmium, but no threshold can be derived from existing data. Additional testing with cadmium and stickleback would be needed to suggest an alternative, quantitative approach.

California↗

USGS2007

The association of arsenic with redox conditions, depth, and ground-water age in the glacial aquifer system of the northern United States

More than 800 wells in the glacial aquifer system of the Northern United States were sampled for arsenic as part of U.S. Geological Survey National Water-Quality Assessment (NAWQA) studies during 1991-2003. Elevated arsenic concentrations (greater than or equal to 10 micrograms per liter) were detected in 9 percent of samples. Elevated arsenic concentrations were associated with strongly reducing conditions. Of the samples classified as iron reducing or sulfate reducing, arsenic concentrations were elevated in 19 percent. Of the methanogenic samples, arsenic concentrations were elevated in 45 percent. In contrast, concentrations of arsenic were elevated in only 1 percent of oxic samples. Arsenic concentrations were also related to ground-water age. Elevated arsenic concentrations were detected in 34 percent of old waters (recharged before 1953) as compared to 4 percent of young waters (recharged since 1953). For samples classified as both old and methanogenic, elevated arsenic concentrations were detected in 62 percent of samples, as compared to 1 percent for samples classified as young and oxic. Arsenic concentrations were also correlated with well depth and concentrations of several chemical constituents, including (1) constituents linked to redox processes and (2) anions or oxyanions that sorb to iron oxides. Observations from the glacial aquifer system are consistent with the idea that the predominant source of arsenic is iron oxides and the predominant mechanism for releasing arsenic to the ground water is reductive desorption or reductive dissolution. Arsenic is also released from iron oxides under oxic conditions, but on a more limited basis and at lower concentrations. Logistic regression was used to investigate the relative significance of redox, ground-water age, depth, and other water-quality constituents as indicators of elevated arsenic concentrations in the glacial aquifer system. The single variable that explained the greatest amount of variation in the data was redox. Multivariate models that included a redox variable overestimated the percentage of samples with elevated arsenic concentrations because, even though elevated arsenic concentrations were associated with strongly reducing samples, not all strongly reducing samples had elevated arsenic concentrations. Arsenic concentrations and redox conditions differed among four broad areas of the glacial aquifer system. For the East, Central, and West-Central north areas, there was a trend of increasing arsenic concentrations that corresponded to an increase in reducing conditions. For the West-Central south area, arsenic concentrations in oxic samples were higher than for the other areas, possibly because of high concentrations of orthophosphate, which is linked to desorption of arsenic from iron oxides under oxic conditions. The observed differences in arsenic concentrations among broad areas of the glacial aquifer system were generally consistent with a conceptual model developed by Smedley and Kinniburg, who studied or reviewed studies of widespread arsenic contamination in Bangladesh, India, China, Vietnam, Hungary, Argentina, northern Chile and the Southwestern United States.

Scientific Investigations Report↗