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USGS2024

State of science, gap analysis, and prioritization for southeastern United States water-quality impacts from coastal storms—Fiscal year 2023 program report to the Water Resources Mission Area from the Water Availability Impacts of Extreme Events Program—Hurricanes

Tropical cyclones (coastal storm events that include tropical depressions, tropical storms, and hurricanes) cause landscape-scale disturbances that can lead to impaired water quality and thus reduce water availability for use. Stakeholders and scientists at local and national scales have illustrated a need for understanding these risks to water quality. A regional and comprehensive understanding of the impacts of tropical storms and hurricanes on surface-water and groundwater quality—and thus water availability—is lacking for potentially impacted coastal and inland areas. As the U.S. Geological Survey considers development of tools to predict the extent to which water-quality impacts of hurricanes affect water availability, an assessment of the state of the science of hurricane impacts is needed, including a gap analysis and prioritization of data and science needs. This assessment focuses on the southeastern coastal States.

southeastern United States↗

USGS2012

Water quality and landscape processes of four watersheds in eastern Puerto Rico

Humid tropical regions occupy about a quarter of Earth's land surface, yet they contribute a substantially higher fraction of the water, solutes, and sediment discharged to the world's oceans. Nearly half of Earth's population lives in the tropics, and development stresses can potentially harm soil resources, water quality, and water supply and in addition increase landslide and flood hazards. Owing to Puerto Rico's steep topography, low water storage capacity, and dependence on trade-wind precipitation, the island's people, ecosystems, and water supply are vulnerable to extreme weather such as hurricanes, floods, and droughts. Eastern Puerto Rico offers a natural laboratory for separating geologic and land-cover influences from regional- and global-scale influences because of its various bedrock types and the changing land cover surrounding intact, mature forest of the Luquillo Experimental Forest. Accordingly, a multiyear assessment of hydrological and biogeochemical processes was designed to develop an understanding of the effects of these differences on local climate, streamflow, water quality, and ecosystems, and to form the basis for a long-term and event-based program of climate and hydrologic monitoring. Because infrequent, large storms play a major role in this landscape, we focused on high-runoff events, sampling 263 storms, including all major hurricanes from 1991 through 2005. The largest storms have profound geomorphic consequences, such as landslides, debris flows, deep gullying on deforested lands, excavation and suspension of sediment in stream channels, and delivery of a substantial fraction of annual stream sediment load. Large storms sometimes entrain ocean foam and spray causing high concentrations of seasalt-derived constituents in stream waters during the storm. Past deforestation and agricultural activities in the Cayaguás and Canóvanas watersheds accelerated erosion and soil loss, and this material continues to be remobilized during large storms. Nearly 5,000 routine and event samples were analyzed for parameters that allow determination of denudation rates based on suspended and dissolved loads; 860 of these samples were analyzed for a comprehensive suite of chemical constituents. The rivers studied are generally similar in water-quality characteristics, and windward or leeward aspect appears to exert a stronger influence on water quality than geology or land cover. Of samples analyzed for comprehensive chemistry and for sediment, 543 were collected at runoff rates greater than 1 millimeter per hour, 256 at rates exceeding 10 millimeters per hour, and 3 at rates exceeding 90 millimeters per hour. Streams have rarely been sampled during events with such high runoff rates. Rates of physical and chemical weathering are especially high, and physical denudation rates, forested watersheds included, are considerably greater than is expected for a steady-state system. The elevated physical erosion drives an increased particulate organic carbon flux, one that is large, important to the carbon cycle, and sustainable, because soil-carbon regeneration is rapid. The 15-year Water, Energy, and Biogeochemical Budget dataset, which includes discharge, field parameters, suspended sediment, major cations and anions, and nutrients, is available from the U.S. Geological Survey's National Water Information System (http://waterdata.usgs.gov/nwis). The dataset provides a baseline for characterizing future environmental change and will improve our understanding of the interdependencies of land, water, and biological resources and their responses to changes in climate and land use. Because eastern Puerto Rico resembles many tropical regions in terms of geology and patterns of development, implications from this study are transferable to other tropical regions facing deforestation, rapid land-use change, and climate change.

Professional Paper↗

USGS2014

Floods of 2011 in New York

Record rainfall combined with above-average temperatures and substantial spring snowmelt resulted in record flooding throughout New York during 2011. Rainfall totals in eastern New York were the greatest since 1895 and as much as 60 percent above the long-term average within the Catskill Mountains area and the Susquehanna River Basin. This report documents the three largest storms and resultant flooding during the year: (1) spring storm during April and May, (2) Tropical Storm Irene during August, and (3) remnants of Tropical Storm Lee during September. According to the Federal Emergency Management Agency (FEMA), the cost of these three storms exceeded $1 billion in Federal disaster assistance. A warm and wet spring in northern New York resulted in record flooding at 21 U.S. Geological Survey (USGS) active streamgages during late April to early May with the annual exceedance probabilities (AEPs) of 11 peak discharges equaling or exceeding 1 percent. Nearly 5 inches of rain during late April combined with a rapidly melting snowpack caused widespread flooding throughout northern New York, resulting in many road closures, millions of dollars in damages, and 23 counties declared disaster areas and eligible for public assistance. On May 6, Lake Champlain recorded its highest lake level in over 140 years. Hurricane Irene entered New York State on August 28 as a tropical storm and traveled up the eastern corridor of the State, leaving a path of destruction and damage never seen in many parts of New York. Thirty-one counties in New York were declared disaster areas with damages of over $1.3 billion dollars and 10 reported deaths. Storm rainfall exceeded 18 inches in the Catskill Mountains area of southeastern New York with many other areas of eastern New York receiving over 7 inches. Catastrophic flooding resulted from the extreme rainfall in many locations, including Schoharie Creek and its tributaries, the eastern Delaware River Basin, the Ausable and Bouquet River Basins in northeastern New York, and several other stream basins throughout southeastern New York. Downstream reaches of the Mohawk River also had substantial flooding. Sixty-two USGS streamgages throughout eastern New York documented record high stream flows and elevations with AEPs of 25 peak discharges equaling or exceeding 1 percent. The USGS streamgage for the Schoharie Creek at Prattsville recorded its greatest peak discharge in 109 years of record at 120,000 cubic feet per second (greater than the 0.2-percent AEP discharge) on August 28. The peak water-surface elevation at the streamgage in Prattsville was 5 feet higher than its previous record in 1996. USGS personnel surveyed 184 high-water marks (HWMs) at 30 locations along an 84-mile reach of Schoharie Creek and compared the elevations to those published by FEMA for the 10-, 2-, 1-, and 0.2-percent AEP floods. Elevations in the lower reaches of the basin exceeded published elevations for the 0.2-percent AEP flood. Remnants of Tropical Storm Lee brought a third major storm to New York in September 2011. Moisture from Lee began moving into New York on September 7 and intensified over the already saturated Susquehanna River Basin. Most of the rain fell on September 8 with storm totals nearing 13 inches in some areas (12.73 inches at Apalachin in Tioga County). Major disaster declarations were issued for 15 counties in and around central New York, making them eligible for individual or public assistance. Ten USGS streamgages within the Susquehanna River Basin documented record-high stream discharges and elevations on September 8, and all were greater than the 1-percent AEP discharge. USGS personnel surveyed 20 HWMs at 18 locations along a 114- mile reach of the Susquehanna River and compared the elevations to those published by FEMA for the 10-, 2-, 1-, and 0.2-percent AEP floods. Several of the surveyed HWMs exceeded published elevations for the 0.2-percent AEP flood.

New York↗

USGS1992

Climatic variability and flood frequency of the Santa Cruz River, Pima County, Arizona

Past estimates of the 100-year flood for the Santa Cruz River at Tucson, Arizona, range from 572 to 2,780 cubic meters per second. An apparent increase in flood magnitude during the past two decades raises concern that the annual flood series is nonstationary in time. The apparent increase is accompanied by more annual floods occurring in fall and winter and fewer in summer. This greater mixture of storm types that produce annual flood peaks is caused by a higher frequency of meridional flow in the upper-air circulation and increased variance of ocean-atmosphere conditions in the tropical Pacific Ocean. Estimation of flood frequency on the Santa Cruz River is complicated because climate affects the magnitude and frequency of storms that cause floods. Mean discharge does not change significantly, but the variance and skew coefficient of the distribution of annual floods change with time. The 100-year flood during El Niffo-Southern Oscillation conditions is 1,300 cubic meters per second, more than double the value for other years. The increase is mostly caused by an increase in recurvature of dissipating tropical cyclones into the Southwestern United States during El Niffo-Southern Oscillation conditions. Flood frequency based on hydroclimatology was determined by combining populations of floods caused by monsoonal storms, frontal systems, and dissipating tropical cyclones. For 1930-59, annual flood frequency is dominated by monsoonal floods, and the estimated 100-year flood is 323 cubic meters per second. For 1960-86, annual flood frequency at recurrence intervals of greater than 10 years is dominated by floods caused by dissipating tropical cyclones, and the estimated 100-year flood is 1,660 cubic meters per second. For design purposes, 1,660 cubic meters per second might be an appropriate value for the 100-year flood at Tucson, assuming that climatic conditions during 1960-86 are representative of conditions expected in the immediate future.

Water Supply Paper↗

USGS2026

Population densities and trends of landbirds in the National Park of American Samoa

The National Park of American Samoa (NPSA), which protects some of the most intact tropical rainforest in the South Pacific, is exposed to recurring, intense tropical cyclones, including Tropical Cyclone Gita in 2018. In combination with other anthropogenic pressures, cyclones represent a potential source of disturbance to landbird populations, particularly native frugivorous and seed-dispersing species. Long-term monitoring provides a means to evaluate population trajectories following disturbance events and to identify potential management gaps. Landbird surveys were conducted in the Tutuila and Taʻū units of NPSA in 2011, 2018, and 2023 using point-transect distance sampling, with vegetation composition and structure quantified at each sampling station. Species-specific detection functions were fitted to count data to estimate densities by unit, with variance estimated using bootstrap procedures. Comparisons of 2018 and 2023 density estimates using two-sample z-tests indicated that changes in most landbird populations were inconclusive. Since 2018, increases in density were observed for the Pacific Imperial Pigeon ( Ducula pacifica ) and Crimson-crowned Fruit Dove ( Ptilinopus porphyraceus ) on Tutuila, while decreases were observed for the Pacific Kingfisher ( Todiramphus sacer ) on Tutuila, and for the Polynesian Wattled Honeyeater ( Foulehaio carunculatus ), Polynesian Starling ( Aplonis tabuensis ), and Samoan Starling ( Aplonis atrifusca ) on Taʻū. The Many-colored Fruit Dove ( Ptilinopus perousii ) remained rare in both units, and the Manuʻa Shrikebill (Clytorhynchus vitiensis powelli) was narrowly distributed on Taʻū, with insufficient detections of either species to estimate density. The cryptic Spotless Crake ( Zapornia tabuensis ) was detected only in 2018. Changes in tree canopy cover and height did not exhibit patterns clearly associated with a major disturbance event and likely reflected differences in sampling frames among surveys. Invasive non-native plants, most notably Miconia crenata , were widespread in both units. Although many landbird populations in NPSA remain abundant, inference from current monitoring is constrained by limited information on vital rates and species-specific responses to invasive species, disease, habitat change, and extreme weather. As climate change is projected to increase tropical cyclone intensity in the South Pacific, sustained monitoring and targeted management will be important for understanding and conserving landbird populations in American Samoa.

National Park of American Samoa, Ta'u, Tutuila↗

USGS1999

Neogene-quaternary Ostracoda and paleoenvironments, of the Limón basin, Costa Rica, and Bocas del Toro basin, Panama

Tropical marine ostracodes from Neogene and Quaternary sediments of the Central American Caribbean region have been the subject of biostratigraphic, ecological, taxonomic, and evolutionary studies. As part of the Panama Paleontology Project (PPP), Neogene and Quaternary ostracodes are being studied from the Central American region. The overall goal of this research is to evaluate the impact of the emergence of the Central American Isthmus as a land barrier between the Caribbean/tropical Atlantic and the Pacific oceans on marine ostracode biodiversity and the oceanic environments in which extant ostracodes evolved. Due to the ecological specificity of many living tropical ostracode species, they are ideally suited for reconstructing paleoenvironments on the basis of their occurrence in fossil assemblages, which in turn can lead to a better understanding of the tropical climatic and tectonic history of Central America. The principal aims of this chapter are: (a) to document the composition of the ostracode assemblages from the Limón Basin of Costa Rica and the Bocas del Toro Basin of Panama, two areas yielding extensive ma rine ostracode assemblages; (b) to describe the environments of deposition within these basins; and (c) to document the stratigraphic distribution of potentially agediagnostic ostracode species in the Limón and Bocas del Toro basins in order to enhance their use in Central American biostratigraphy. A secondary, but none-the-less important goal is to assemble a database on the distribution of modem ostracode species in the Caribbean and adjacent areas as a basis for comparison with fossil assemblages. Although the ecological, biostratigraphic and paleoenvironmental conclusions presented here will improve as additional material is studied, these fossil and modem ostracode databases constitute the foundation for future evolutionary and geochernical studies of tropical Caribbean and eastern Pacific Ocean ostracodes. Moreover, we present here evidence that major faunal and oceanic changes occurred in the westem Caribbean over the last 4 million years, probably related to changes in ocean circulation due to the emergence of the Isthmus as well as other climatic events.

Bulletins of American Paleontology↗

USGS2023

Tree symbioses sustain nitrogen fixation despite excess nitrogen supply

Symbiotic nitrogen fixation (SNF) is a key ecological process whose impact depends on the strategy of SNF regulation—the degree to which rates of SNF change in response to limitation by N versus other resources. SNF that is obligate or exhibits incomplete downregulation can result in excess N fixation, whereas a facultative SNF strategy does not. We hypothesized that tree-based SNF strategies differed by latitude (tropical vs. temperate) and symbiotic type (actinorhizal vs. rhizobial). Specifically, we expected tropical rhizobial symbioses to display strongly facultative SNF as an explanation of their success in low-latitude forests. In this study we used 15 N isotope dilution field experiments in New York, Oregon, and Hawaii to determine SNF strategies in six N-fixing tree symbioses. Nitrogen fertilization with +10 and +15 g N m −2 year −1 for 4–5 years alleviated N limitation in all taxa, paving the way to determine SNF strategies. Contrary to our hypothesis, all six of the symbioses we studied sustained SNF even at high N. Robinia pseudoacacia (temperate rhizobial) fixed 91% of its N (%N dfa ) in controls, compared to 64% and 59% in the +10 and +15 g N m −2 year −1 treatments. For Alnus rubra (temperate actinorhizal), %N dfa was 95%, 70%, and 60%. For the tropical species, %N dfa was 86%, 80%, and 82% for Gliricidia sepium (rhizobial); 79%, 69%, and 67% for Casuarina equisetifolia (actinorhizal); 91%, 42%, and 67% for Acacia koa (rhizobial); and 60%, 51%, and 19% for Morella faya (actinorhizal). Fertilization with phosphorus did not stimulate tree growth or SNF. These results suggest that the latitudinal abundance distribution of N-fixing trees is not caused by a shift in SNF strategy. They also help explain the excess N in many forests where N fixers are common.

Hawai'i, New York, Oregon↗

USGS2017

Late Quaternary environmental dynamics in the Atacama Desert reconstructed from rodent midden pollen records

In the past two decades, much has been learned about the late Quaternary climate history of the Atacama Desert with some details still unclear about the seasonality, timing and extent of wet and dry phases. Modern climate studies reveal that, far from exhibiting a unique pattern, seasonal precipitation originates from many sources and mechanisms. For the last 16 ka, we attempt to sort out these complexities in pollen records from four fossil rodent midden series spanning 22°–25°S in northern Chile. Widespread wet conditions prevailed during the late Pleistocene and early Holocene, particularly between 13 and 9 ka, evidenced by <400 m lowering of pollen zones (plant communities) compared to today. Regional differences in the timing and magnitude of this displacement may be related to the prevailing source (tropical/extra‐tropical) or mode (NNW/SE) of tropical precipitation through time. Wet conditions persisted well into the early Holocene, lasting ∼1–1.5 ka longer than previously suggested. The pollen record suggests extreme drying ∼8 ka, possibly associated with a northward shift of the Inter Tropical Convergence Zone, tracking minimum insolation values at subtropical latitudes during the austral summer. The establishment of conditions similar to today happened ∼4 ka.

Journal of Quaternary Science↗

USGS1995

Sediment resuspension mechanisms in Old Tampa Bay, Florida

The mechanisms that resuspend bottom sediments in Old Tampa Bay, a shallow, microtidal, subtropical estuary in west-central Florida, were determined by analysing data collected during several periods from 1988 to 1990. Hydrodynamic and suspended-solids concentration data were collected at a relatively deep (4 m) site where a permanent platform was built and at a relatively shallow (1·5 m) site where a submersible instrument package was deployed. Bottom sediments were non-cohesive silts and fine sands. The primary sediment resuspension mechanism at both sites was wind waves, which were generated by strong and sustained winds associated with winter storms and tropical storms. At the platform, waves were depth-transitional, and estimated bottom shear stresses were most sensitive to wave period and water depth. Concentrations of suspended solids at this site corresponded well with wave motion, and non-linear wave-current interaction was small. At the shallow-water site, concentrations of suspended solids were elevated during periods of strong north-easterly winds and large bottom orbital velocities. At both sites, wind direction was an important factor in determining the occurrence and magnitude of sediment resuspension. Resuspended sediments settled within several hours as storm intensity diminished. Winds and waves generated by thunderstorms were more transient than those generated by winter storms and tropical storms. Based on the data collected during this study, thunderstorms are less likely to resuspend bottom sediment than winter storms and tropical storms. Maximum tidal currents at the study sites are usually less than 15 cm s −1 and did not increase observed concentrations of suspended solids.

Florida↗

USGS1997

The relationships of seabird assemblages to physical habitat features in Pacific equatorial waters during spring 1984-1991

The association of seabird species groups with physical habitat was investigated in the eastern tropical Pacific Ocean, far from any breeding colonies. This avoided birds that commute between colony and feeding habitat, behaviour that confuses associations with specific water types and current systems. Seabirds were counted on duplicate tracks in the eastern tropical Pacific each spring from 1984-1991. On each cruise, seabird habitat was measured on the basis of six factors and focused on three species groups: (A) black-winged petrel and white-winged petrel, (B) Juan Fernandez petrel, wedge-tailed shearwater, and sooty tern, and (C) Leach's storm-petrel and wedge-rumped storm-petrel. Group A was associated with the South Equatorial Current, particularly in cooler waters (median of 26.4??C); both petrel species followed this assemblage association with current. Group B was associated with areas characterized by deep thermoclines (median of 60 m) and low salinities (median of 34.33). Within Group B, two of the three species' responses were consistent with the group pattern; Juan Fernandez petrel differed by occurring more often where thermocline slopes were steep (median of 9.8 deg C m-1). Group C was not associated with any physical habitat variable. This was due to species in the group being associated with different habitats: Leach's storm-petrel with the tropical and equatorial surface water masses and wedge-rumped storm-petrel with waters having shallower thermocline depths (median of 22 m). Overall, two of the three assemblages appeared to be associated with physical habitat during spring with consistency among the species in the group. An association with thermocline depth may indicate that productivity was an important predictor of assemblage presence.

Conference Paper↗

USGS2023

Functional gene composition and metabolic potential of deep-sea coral-associated microbial communities

Over the past decade, an abundance of 16S rRNA gene surveys have provided microbiologists with data regarding the prokaryotes present in a coral-associated microbial community. Functional gene studies that provide information regarding what those microbes might do are fewer, particularly for non-tropical corals. Using the GeoChip 5.0S microarray, we present a functional gene study of microbiomes from five species of cold-water corals collected from depths of 296–1567 m. These species included two octocorals, Acanthogorgia aspera and Acanthogorgia spissa , and three stony corals: Desmophyllum dianthus , Desmophyllum pertusum (formerly Lophelia pertusa ), and Enallopsammia profunda . A total of 24,281 gene sequences (representing different microbial taxa) encoding for 383 functional gene families and representing 9 metabolic gene categories were identified. Gene categories included metabolism of carbon, nitrogen, phosphorus, and sulfur, as well as virulence, organic remediation, metal homeostasis, secondary metabolism and phylogeny. We found that microbiomes from Acanthogorgia spp. were the most functionally distinct but also least diverse compared against those from stony corals. Desmophyllum spp. microbiomes were more similar to each other than to E. profunda . Of 383 total gene families detected in this study, less than 20% were significantly different among these deep-water coral species. Similarly, out of 59 metabolic sub-categories for which we were able to make a direct comparison to microbiomes of tropical corals, only 7 were notably different: anaerobic ammonium oxidation (anammox), chitin degradation, and dimethylsulfoniopropionate (DMSP) degradation, all of which had higher representations in deep-water corals; and chromium homeostasis/resistance, copper homeostasis/resistance, antibiotic resistance, and methanogenesis, all of which had higher representation in tropical corals. This implies a broad-scale convergence of the microbial functional genes present within the coral holobiont, independent of coral species, depth, symbiont status, and morphology.

Coral Reefs↗

USGS1991

Pliocene shallow water paleoceanography of the North Atlantic ocean based on marine ostracodes

Middle Pliocene marine ostracodes from coastal and shelf deposits of North and Central America and Iceland were studied to reconstruct paleotemperatures of shelf waters bordering portions of the Western Boundary Current System (including the Gulf Loop Current, Florida Current, Gulf Stream and North Atlantic Drift). Factor analytic transfer functions provided Pliocene August and February bottom-water temperatures of eight regions from the tropics to the subfrigid. The results indicate: (1) meridional temperature gradients in the western North Atlantic were less steep during the Pliocene than either today or during Late Pleistocene Isotope Stage 5e; (2) tropical and subtropical shelf waters during the Middle Pliocene were as warm as, or slightly cooler than today; (3) slightly cooler water was on the outer shelf off the southeastern and mid-Atlantic coast of the U.S., possibly due to summer upwelling of Gulf Stream water; (4) the shelf north of Cape Hatteras, North Carolina may have been influenced by warm water incursions from the western edge of the Gulf Stream, especially in summer; (5) the northeast branch of the North Atlantic Drift brought warm water to northern Iceland between 4 and 3 Ma; evidence from the Iceland record indicates that cold East Greenland Current water did not affect coastal Iceland between 4 and 3 Ma; (6) Middle Pliocene North Atlantic circulation may have been intensified, transporting more heat from the tropics to the Arctic than it does today.

Quaternary Science Reviews↗

USGS2021

Does geomorphology determine vulnerability of mangrove coasts to sea-level rise?

The greatest climate-based threat to coastlines worldwide is sea-level rise. We tested the hypothesis that tropical coasts fringed by mangroves and receiving high inputs of terrigenous sediment are less vulnerable to sea-level rise than biogenic systems dependent upon peat formation for vertical land development. An analysis of published data spanning a range of geomorphic settings showed that mineral accretion was a poor predictor of vulnerability to rising sea level. We additionally compared two oceanic island systems representing two extremes along this sediment gradient to further examine controls on elevation dynamics in minerogenic versus biogenic mangrove systems. Minerogenic systems characterized by intermediate to high rates of mineral sedimentation (Pacific high islands in Micronesia) were not better buffered against sea-level rise because of high subsidence rates. Peat-forming systems (Caribbean low islands in Belize) kept pace with relative sea-level rise (combined ocean and land movements) because of subsurface expansion driven by root matter accumulation. The data were not consistent with the paradigm that tropical coastlines characterized by peat-forming mangroves are generally more vulnerable to sea-level rise compared to minerogenic systems; however, they are not necessarily equally sensitive to the same external and internal forces controlling soil elevations. Our findings demonstrate that reliance on surface accretion data alone can lead to an inaccurate evaluation of coastal vulnerability and why all surface and subsurface land movements must be considered in relation to local sea-level trends to assess risk of submergence. Recognition of such differences is essential to proper management of tropical coastlines to ensure their resilience in the face of future sea-level rise.

Book chapter↗

USGS2013

The conservation status of the world’s reptiles

Effective and targeted conservation action requires detailed information about species, their distribution, systematics and ecology as well as the distribution of threat processes which affect them. Knowledge of reptilian diversity remains surprisingly disparate, and innovative means of gaining rapid insight into the status of reptiles are needed in order to highlight urgent conservation cases and inform environmental policy with appropriate biodiversity information in a timely manner. We present the first ever global analysis of extinction risk in reptiles, based on a random representative sample of 1500 species (16% of all currently known species). To our knowledge, our results provide the first analysis of the global conservation status and distribution patterns of reptiles and the threats affecting them, highlighting conservation priorities and knowledge gaps which need to be addressed urgently to ensure the continued survival of the world’s reptiles. Nearly one in five reptilian species are threatened with extinction, with another one in five species classed as Data Deficient. The proportion of threatened reptile species is highest in freshwater environments, tropical regions and on oceanic islands, while data deficiency was highest in tropical areas, such as Central Africa and Southeast Asia, and among fossorial reptiles. Our results emphasise the need for research attention to be focussed on tropical areas which are experiencing the most dramatic rates of habitat loss, on fossorial reptiles for which there is a chronic lack of data, and on certain taxa such as snakes for which extinction risk may currently be underestimated due to lack of population information. Conservation actions specifically need to mitigate the effects of human-induced habitat loss and harvesting, which are the predominant threats to reptiles.

Biological Conservation↗

USGS2026

VegET evapotranspiration for Africa: Continental-scale simulation, multi-product evaluation, and drought assessment

Study region Continental Africa, encompassing diverse climatic zones—tropical, arid, and temperate—and spanning major transboundary river basins such as the Nile, Niger, Congo, Volta, and Zambezi River Basins. The region exhibits pronounced hydroclimatic gradients and heterogeneous land use systems ranging from rainfed croplands and rangelands to dense tropical forests and irrigated schemes. Study focus Actual evapotranspiration (ETa) is a central component of the terrestrial water balance, governing the redistribution of water and energy between the land surface and the atmosphere. Accurate estimation of ETa at continental scale is critical for hydrological monitoring, water resource management, and climate adaptation, as well as for quantifying water, energy, and carbon fluxes that underpin sustainable development. In this study, we applied the agro-hydrologic VegET v2 model to simulate a new, high-resolution, continental-scale ETa dataset for Africa (2000–2021). The model results were benchmarked against four widely used remote sensing-based products—MODIS16 v6.1, SSEBop v6.1, WaPOR v3, and GLEAM v4.1a—across major climate zones, land use types, and River Basins, providing a comprehensive multi-product evaluation of evapotranspiration dynamics across the continent. New hydrological insights for the region Validation against eddy covariance flux tower observations at eight representative sites confirmed that VegET v2 accurately reproduces the seasonal dynamics of observed ETa, achieving a correlation (r) of 0.8 and an RMSE of 25 mm month⁻¹ —accuracy that is comparable to or higher than accuracies of satellite-based products MODIS16, SSEBop, and GLEAM. This study represents one of the first Africa-wide hydrological simulations of ETa, extending the VegET model beyond basin-scale applications. Intercomparisons reveal that VegET aligns closely with MODIS16, SSEBop, and GLEAM in humid and tropical regions (r = 0.80–0.90; RMSE < 20 mm month⁻¹), while greater discrepancies appear in arid and semi-arid zones, where WaPOR tends to overestimate ETa (RMSE ≥ 28 mm month⁻¹). Despite these differences, VegET effectively captures spatial and temporal ETa variability across rainfed croplands, forests, and savannas, supporting its utility in regional water balance assessments, water accounting, and drought monitoring. A key application of VegET v2 is the Evapotranspiration Deficit Index (ETDI), derived by integrating VegET-based ETa with potential evapotranspiration (PET) to quantify water stress. ETDI successfully captured major drought episodes across Africa, including persistent Sahelian and southern African dry spells, the 2020–2021 winter drought in the Maghreb, and the 2018–2019 austral summer drought in southern Africa, while identifying positive anomalies over central Africa indicative of recurrent wetness. These results underscore VegET’s capability as a hydrologically consistent, operational tool for continental ETa monitoring and drought assessment, offering support for basin-scale water balance studies, food security planning, and climate resilience across Africa’s diverse hydrological environments.

Journal of Hydrology: Regional Studies↗

USGS2017

Diurnal feeding behavior of the American Eel Anguilla rostrata

Despite potential to structure ecosystem food webs through top-down effects, the trophic interactions of the American Eel Anguilla rostrata remain largely understudied. All previous research on the trophic ecology of American Eel in inland aquatic ecosystems has been conducted in temperate continental regions of the species' range. These studies have led to a paradigm that American Eel is a nocturnally active benthic predator , which most commonly consumes benthic invertebrates. Tropical island streams and rivers have habitats and communities that are distinct from temperate counterparts, but comprise a large portion of the adult habitat in the American Eel's range. We documented a previously undescribed diurnal feeding behavior by American Eel in a Caribbean river and demonstrate that this behavior, and a shift toward more frequent daytime feeding, is linked to periodic mass migrations of postlarvae of amphidromous fish taxa, including the Sicydiine goby Sicydium spp. Our findings indicate that periodic mass migrations of amphidromous postlarvae could function as a potentially important food source for American Eel in tropical regions of its distribution, despite the intermittence of availability. Furthermore, this suggests that the American Eel plays an important role in the structure of tropical lotic food webs through top-down effects that are potentially augmented by instream barriers.

Food Webs↗

USGS2017

Storms, channel changes, and a sediment budget for an urban-suburban stream, Difficult Run, Virginia, USA

Determining erosion and deposition rates in urban-suburban settings and how these processes are affected by large storms is important to understanding geomorphic processes in these landscapes. Sediment yields in the suburban and urban Upper Difficult Run are among the highest ever recorded in the Chesapeake Bay watershed, ranging from 161 to 376 Mg/km 2 /y. Erosion and deposition of streambanks, channel bed, and bars and deposition of floodplains were monitored between 1 March 2010 and 18 January 2013 in Upper Difficult Run, Virginia, USA. We documented the effects of two large storms, Tropical Storm Lee (September 2011), a 100-year event, and Super Storm Sandy (October 2012) a 5-year event, on channel erosion and deposition. Variability in erosion and deposition rates for all geomorphic features, temporally and spatially, are important conclusions of this study. Tropical Storm Lee was an erosive event, where erosion occurred on 82% of all streambanks and where 88% of streambanks that were aggrading before Tropical Storm Lee became erosional. Statistical analysis indicated that drainage area explains linear changes (cm/y) in eroding streambanks and that channel top width explains cross-sectional area changes (cm 2 /y) in eroding streambanks and floodplain deposition (mm/y). A quasi-sediment budget constructed for the study period using the streambanks, channel bed, channel bars, and floodplain measurements underestimated the measured suspended-sediment load by 61% (2130 Mg/y). Underestimation of the sediment load may be caused by measurement errors and to contributions from upland sediment sources, which were not measured but estimated at 36% of the gross input of sediment. Eroding streambanks contributed 42% of the gross input of sediment and accounted for 70% of the measured suspended-sediment load. Similar to other urban watersheds, the large percentage of impervious area in Difficult Run and direct runoff of precipitation leads to increased streamflow and streambank erosion. This study emphasizes the importance of streambanks in urban-suburban sediment budgets but also suggests that other sediment sources, such as upland sources, which were not measured in this study, can be an important source of sediment.

Virginia↗

USGS2004

Ancient wet aeolian environments on Earth: Clues to presence of fossil/live microorganisms on Mars

Ancient wet aeolian (wet-sabkha) environments on Earth, represented in the Entrada and Navajo sandstones of Utah, contain pipe structures considered to be the product of gas/water release under pressure. The sediments originally had considerable porosity allowing the ingress of living plant structures, microorganisms, clay minerals, and fine-grained primary minerals of silt and sand size from the surface downward in the sedimentary column. Host rock material is of a similar size and porosity and presumably the downward migration of fine-grained material would have been possible prior to lithogenesis and final cementation. Recent field emission scanning electron microscopy (FESEM) and EDS (energy-dispersive spectrometry) examination of sands from fluidized pipes in the Early Jurassic Navajo Sandstone reveal the presence of fossil forms resembling fungal filaments, some bearing hyphopodium-like structures similar to those produced by modern tropical leaf parasites. The tropical origin of the fungi is consistent with the paleogeography of the sandstone, which was deposited in a tropical arid environment. These fossil fungi are silicized, with minor amounts of CaCO3 and Fe, and in some cases a Si/Al ratio similar to smectite. They exist as pseudomorphs, totally depleted in nitrogen, adhering to the surfaces of fine-grained sands, principally quartz and orthoclase. Similar wet aeolian paleoenvironments are suspected for Mars, especially following catastrophic sediment-charged floods of enormous magnitudes that are believed to have contributed to rapid formation of large water bodies in the northern plains, ranging from lakes to oceans. These events are suspected to have contributed to a high frequency of constructional landforms (also known as pseudocraters) related to trapped volatiles and water-enriched sediment underneath a thick blanket of materials that were subsequently released to the martian surface, forming piping structures at the near surface and constructional landforms at the surface. This constructional process on Mars may help unravel the complex history of some of the piping structures observed on Earth; on Earth, evidence for the constructional landforms has been all but erased and the near-surface piping structures exposed through millions of years of differential erosion and topographic inversion now occur as high-standing promontories. If the features on both Earth and Mars formed by similar processes, especially involving water and other volatiles, and since the piping structures of Earth provided suitable environments for life to thrive in, the martian features in the northern plains should be considered as prime targets for physico/mineral/chemical/microbiological analyses once the astrobiological exploration of the red planet begins in earnest. ?? 2004 Elsevier Inc. All rights reserved.

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