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Sustaining Environmental Capital Initiative summary report

Federal agencies need credible scientific information to determine the production and value of ecosystem services in an efficient and timely manner. The U.S. Geological Survey addresses this scientific information need through the Sustaining Environmental Capital Initiative project. The project has relied on U.S. Geological Survey expertise related to water, fisheries, advanced modeling, and economics and other social sciences to conduct eight case studies across a range of environment types, including water-based environments, deserts, sagebrush ecosystems, floodplains, and forests. The Sustaining Environmental Capital Initiative also supported the development and expansion of four tools with the intent of adding content and usability for partners’ decision-making needs. The tools are the Natural Value Resource Center, Benefit Transfer Toolkit, Riverine Environmental Flow Decision Support System, and Artificial Intelligence for Ecosystem Services modeling platform.

Open-File Report↗

Reexamining the frequency range of hearing in silver (Hypophthalmichthys molitrix) and bighead (H. nobilis) carp

Silver ( Hypophthalmichthys molitrix ) and bighead ( H . nobilis ) carp (collectively bigheaded carp) are invasive fish that threaten aquatic ecosystems in the upper Midwest United States and the Laurentian Great Lakes. Controlling bigheaded carp is a priority of fisheries managers and one area of focus involves developing acoustic deterrents to prevent upstream migration. For an acoustic deterrent to be effective however, the hearing ability of bigheaded carp must be characterized. A previous study showed that bigheaded carp detected sound up to 3 kHz but this range is narrower than what has been reported for other ostariophysans. Therefore, silver and bighead carp frequency detection was evaluated in response to 100 Hz to 9 kHz using auditory evoked potentials (AEPs). AEPs were recorded from 100 Hz to 5 kHz. The lowest thresholds were at 500 Hz for both species (silver carp threshold: 80.6 ± 3.29 dB re 1 μPa SPL rms , bighead carp threshold: 90.5 ± 5.75 dB re 1 μPa SPL rms ; mean ± SD). These results provide fisheries managers with better insight on effective acoustic stimuli for deterrent systems, however, to fully determine bigheaded carp hearing abilities, these results need to be compared with behavioral assessments.

PLoS ONE↗

A suite of standard post-tagging evaluation metrics can help assess tag retention for field-based fish telemetry research

Telemetry can inform many scientific and research questions if a context exists for integrating individual studies into the larger body of literature. Creating cumulative distributions of post-tagging evaluation metrics would allow individual researchers to relate their telemetry data to other studies. Widespread reporting of standard metrics is a precursor to the calculation of benchmarks for these distributions (e.g., mean, SD, 95% CI). Here we illustrate five types of standard post-tagging evaluation metrics using acoustically tagged Blue Catfish ( Ictalurus furcatus ) released into a Kansas reservoir. These metrics included: (1) percent of tagged fish detected overall, (2) percent of tagged fish detected daily using abacus plot data, (3) average number of (and percent of available) receiver sites visited, (4) date of last movement between receiver sites (and percent of tagged fish moving during that time period), and (5) number (and percent) of fish that egressed through exit gates. These metrics were calculated for one to three time periods: early (<10 d), during (weekly), and at the end of the study (5 months). Over three-quarters of our tagged fish were detected early (85%) and at the end (85%) of the study. Using abacus plot data, all tagged fish (100%) were detected at least one day and 96% were detected for > 5 days early in the study. On average, tagged Blue Catfish visited 9 (50%) and 13 (72%) of 18 within-reservoir receivers early and at the end of the study, respectively. At the end of the study, 73% of all tagged fish were detected moving between receivers. Creating statistical benchmarks for individual metrics can provide useful reference points. In addition, combining multiple metrics can inform ecology and research design. Consequently, individual researchers and the field of telemetry research can benefit from widespread, detailed, and standard reporting of post-tagging detection metrics.

Reviews in Fish Biology and Fisheries↗

Testing archival tag technology in coho salmon

Archive tags with temperature and light-geolocation sensors will be monitored for post-smolt coho salmon in Cook Inlet. Light/location relationships specific to the Gulf of Alaska developed under Project 00478 will be applied in this study of movement and migration paths for coho salmon during maturation in ocean environments in Cook Inlet. Salmon for this study will be reared in captivity (at the Alaska Department of Fish and Game hatchery at Fort Richardson) to 1+ year of age (200-250mm) and released in Cook Inlet as part of the department's Ship Creek sport-fishing hatchery release. FY 01 includes pilot studies of tag retention, behavior, and growth for coho in captivity. Ship Creek coho will be tagged mid-May. A spring release experiment in the first year will be contingent on the successful implementation and retention of these tags. Surveys for early jack recoveries will be done at the Ship Creek weir and among sport fishers. Monitoring for adult tag recoveries will be done in the coho commercial fishery in Cook Inlet and the derby sport fishery on Ship Creek. Archive tagged fish will be used to document coho salmon use of marine habitats, migration routes, contribution to the sport fishery, and hatchery/wild interactions for salmon in Cook Inlet.

Alaska↗

Spatial units to support Lake Erie Cisco Coregonus artedi restoration

At the request of the Lake Erie Committee, spatial units for Lake Erie Cisco were delineated during spring 2024. Spatial units correspond to the reproductive habitat of extirpated (unoccupied spatial units) and extant (occupied spatial units) populations. Spatial units were delineated using a Council of Lake Committees-endorsed method that involves synthesizing data for evaluation by a panel with expertise on the focal organisms and ecosystems. By examining catch, survey, observational, and genetic data, an expert panel determined that no viable Cisco populations remain in Lake Erie. Experts delineated one eastern and one western unoccupied Cisco spatial unit in Lake Erie based on interpretation of historical movement and spawning locations and timing. The expert panel also identified eleven key questions that can be investigated to further inform Lake Erie Cisco restoration. The two unoccupied spatial units will form the basis of a follow-on threats assessment and population viability models that together provide fishery managers science-based planning tools for Lake Erie Cisco restoration.

Lake Erie↗

A preliminary report of ongoing research of the ecology of Black-capped Petrel (Pterodroma hasitata) in Sierra de Bahoruco, Dominican Republic – I: GPS tracking of breeding adults

The Black-capped Petrel (also known regionally as Diablotin) is a gadfly petrel endemic to the Caribbean. Population estimates based on at-sea observations range from 2,000 to 4,000 individuals, with a fragmented breeding population estimated at 500 to 1,000 pairs. At sea, the expansive marine range of the species exposes it to many conservation threats including fisheries activity, offshore energy development, marine pollution including mercury bio-accumulation, and climate change. Such disturbances at sea have been under-studied although they are likely to impact the survival of the species.

Sierra de Bahoruco↗

Conditions for growth and survival of bull trout in Beulah Reservoir, Oregon. Annual report 2001

The Bureau of Reclamation (BOR) constructed Agency Valley Dam on the North Fork of the Malheur River in 1934-35, creating Beulah Reservoir. The project is operated and maintained by the Vale Irrigation District for irrigation and downstream flood control, with no minimum pool or outflow operational criteria. Although the project is not operated for fish and wildlife values, the reservoir supports a rainbow trout Oncorhynchus mykiss fishery and also seasonally harbors an adfluvial population of bull trout Salvelinus confluentus (Oregon Department of Fish and Wildlife [ODFW]; Burns Paiute Tribe). Bull trout were listed by the USFWS as a threatened species throughout the Columbia and Klamath river basins in 1998, and Oregon has listed the North Fork Malheur River population “Of Special Concern”.

Oregon↗

Changes in yellow perch (Perca flavescens) populations of Lake Michigan, 1954-75

In the early and mid-1960s the abundance of yellow perch ( Perca flavescens ) in Lake Michigan declined abruptly. The decline began in the northern part of the lake and spread progressively southward. Circumstantial evidence suggests that the nonnative alewife ( Alosa pseudoharengus ), by interfering with perch reproduction, was the primary cause of the decline. The alewife was first reported in northeastern Lake Michigan in 1949, and had become extremely abundant throughout the lake before an enormous die-off in 1967 reduced its numbers by an estimated 70%. An intensive fishery hastened the decline of perch. In most areas the decline was immediately preceded by a period of conspicuously high commercial production. This high production appears to have been related in part to increased growth rates of perch resulting from much lower density of younger fish. A sport fishery for perch in shallow water collapsed a few years before the species declined in abundance. The most logical explanation is that heavy concentrations of alewives physically displaced the perch from nearshore areas. Although perch populations increased in some areas in the 1970s, a full recovery is unlikely unless alewife numbers are further reduced.

Journal of the Fisheries Research Board of Canada↗

Comparing historical catch rates of American shad in multifilament and monofilament nets: A step toward setting restoration targets for Virginia stocks

Recreational and commercial harvest of American shad Alosa sapidissima in the Virginia waters of the Chesapeake Bay and its tributaries has been prohibited since 1994. The Atlantic States Marine Fisheries Commission Shad and River Herring Management Plan requires that Virginia develop restoration targets for its shad populations, but estimates of their sizes are not available and there is little information about historic population levels. Thus, establishing restoration targets based on population size is problematic. A current spawning stock monitoring program yields catch rate information that can be compared with historic catch rate information recorded in commercial fishery logbooks from the 1950s and the 1980s. However, multifilament gill nets were used in the 1950s and monofilament nets were used in the 1980s (as well as in the current monitoring program). A Latin square design was employed to test the differences in relative fishing power of the two gear types over 2 years of seasonal sampling on the York River, Virginia. Estimates are that the monofilament nets are roughly twice as efficient as the multifilament nets. Reported catch rates in the 1950s and 1980s are roughly equivalent. However, when adjustments are made for the differences in fishing gear, catch rates for the 1950s are twice as high as those during the 1980s. These results provide valuable information for setting restoration targets for Virginia stocks of American shad. ?? Copyright by the American Fisheries Society 2006.

North American Journal of Fisheries Management↗

Final report: Understanding historical and predicting future lake temperatures in North and South Dakota

Lakes, reservoirs, and ponds are central and integral features of the landscape of the North Central US. These water bodies provide aesthetic, cultural, and ecosystem services to surrounding wildlife and human communities. Lakes are warming, resulting in the loss of many native fish. In order to manage economically valuable fisheries and other ecosystem services provided by lakes, it is important for managers to have access to accurate estimates of water temperature to better understand past change and to plan for potential future further warming. These data are invaluable for making decisions such as whether to continue stocking plans as usual in certain lakes or how to set specific harvest limits. This project developed new state-of-the-art methods to model historical thermal habitat for thousands of lakes in the Midwest US.

North Dakota, South Dakota↗

Potential threats facing a globally important population of the magnificent frigatebird Fregata magnificens

Tracking of seabirds has been used to identify foraging hotspots, migratory routes and to assess at-sea threats facing populations. One such threat is the potential negative interaction between seabirds and fisheries through incidental by-catch. In 2012, 60 magnificent frigatebirds Fregata magnificens were found dead, entangled in fishing line, at the globally important breeding site in the British Virgin Islands (BVI). To assess the potential relationship between foraging behaviour and fishing activity, data loggers were deployed on breeding magnificent frigatebirds to record foraging movements. In addition, a survey of local fishers was conducted to assess the scale of incidental by-catch. We recorded 28 complete foraging trips from GPS and GPS-GSM loggers, and 1758 PTT locations. Birds travelled up to 3.3–1067 km from their breeding colony and entered the waters of 10 neighbouring territories. A high percentage of fishers (93% n = 28) reported catching at least one seabird annually, of which the most common were magnificent frigatebirds and brown boobies Sula leucogaster . There are estimated to be at least 1112 vessels in the recreational and artisanal fishing fleets of BVI and its neighbouring islands. Thus, this substantial fishery may have potentially profound effects on seabird populations in the region.

Tropical Zoology↗

Development of new information to inform fish passage decisions at the Yale and Merwin hydro projects on the Lewis River, Washington—Final report, 2018

The reintroduction of extirpated salmonids to historically occupied areas is becoming increasingly common as a conservation and recovery strategy. Often, reintroductions are implemented after the factors that originally led to species extirpation have been reduced, eliminated, or mitigated. For anadromous Oncorhynchus spp. (Pacific salmon) and O. mykiss (steelhead), addressing barriers to migration, which have been a primary factor in the decline and extirpation of many populations, has been an integral component of recovery efforts. Mitigation has included barrier removal, developing fish passage opportunities, and (or) actively trapping and hauling juvenile and adult anadromous salmonids around barriers. With any reintroduction, there are a number of concerns regarding the ecological impact of the reintroduction efforts. Three of the main tenets to consider when assessing reintroductions are (1) the potential benefits if reintroduction is successful, (2) the biological risk through interactions of reintroduced strains with existing populations, and (3) the factors potentially limiting a successful reintroduction. This report focuses on information and data to address the second and third factors as they apply to the upper Lewis River in Washington. The upper Lewis River historically contained wild populations of O. tshawytscha (Chinook salmon), O. kisutch (coho salmon), and steelhead. These populations were extirpated after completion of hydropower facilities on Lake Merwin in 1932, Yale Lake in 1953, and Swift Reservoir in 1958, which prevented fish from migrating to and from ocean environments. However, recent licenses issued by the Federal Energy Regulatory Commission require the installation and operation of an upstream fish passage facility at Lake Merwin and a downstream fish passage facility at Swift Reservoir. The licenses were developed in consultation with the National Marine Fisheries Service and the U.S. Fish and Wildlife Service. The overarching goal of this fish reintroduction project is to establish viable, self-sustaining, naturally reproducing, harvestable populations of spring Chinook salmon, winter steelhead, and coho salmon at levels higher than minimum viable populations. This report uses a combination of field data and existing information to address six key objectives related to the reintroduction in order to inform decisions about passage at the Yale Lake and Lake Merwin hydropower projects. The objectives are (1) a review of information relevant to anadromous fish reintroduction and full fish passage; (2) a habitat assessment of tributaries to Swift Reservoir, Yale Lake, and Lake Merwin; (3) a field study to assess adult potential for spawning success; (4) an assessment of juvenile production and outmigration success; (5) a Lake Merwin predator impact study; and (6) a set of studies assessing interactions between anadromous and resident fish.

Washington↗

Evolutionary and ecological correlates of thiaminase in fishes

Thiamine (vitamin B 1 ) is required by all living organisms in multiple metabolic pathways. It is scarce in natural systems, and deficiency can lead to reproductive failure, neurological issues, and death. One major cause of thiamine deficiency is an overreliance on diet items containing the enzyme thiaminase. Thiaminase activity has been noted in many prey fishes and linked to cohort failure in salmonid predators that eat prey fish with thiaminase activity, yet it is generally unknown whether evolutionary history, fish traits, and/or environmental conditions lead to production of thiaminase. We conducted literature and GenBank BLAST sequence searches to collect thiaminase activity data and sequence homology data in expressed protein sequences for 300 freshwater and marine fishes. We then tested whether presence or absence of thiaminase could be predicted by evolutionary relationships, trophic level, omega-3 fatty acid concentrations, habitat, climate, invasive potential, and body size. There was no evolutionary relationship with thiaminase activity. It first appears in Class Actinoptergyii (bony ray-finned fishes) and is present across the entire Actinoptergyii phylogeny in both primitive and derived fish orders. Instead, ecological factors explained the most variation in thiaminase: fishes were more likely to express thiaminase if they fed closer to the base of the food web, were high in polyunsaturated fatty acids, lived in freshwater, and were from tropical climates. These data provide a foundation for understanding sources of thiaminase leading to thiamine deficiency in fisheries and other organisms, including humans that eat uncooked fish.

Scientific Reports↗

Modeling White Sucker (Catostomus commersonii) populations to assess commercial harvest influence on age structure

Commercial harvest of White Suckers Catostomus commersonii for bait in the American Lobster Homarus americanus industry is minimally regulated in Maine and there are concerns as to the influence of increasing harvest. We built a population model using parameters (i.e. age-specific mortality, age at maturity, and size-specific fecundity) from literature and field studies to investigate the theoretical effects of harvest mortality on age structure. Because stock-recruitment relations are poorly characterized for this species, we explored the influence of both Beverton-Holt and Ricker recruitment processes. Our base model closely resembled the empirical age structures reported from three unfished lakes in Maine, with four percent of fish in the modeled spawning run being age-10 or older. We assessed the additive effects of harvest mortality on age structure using the full range of possible mortalities. As expected, increased harvest mortality in the model resulted in a decline and disappearance of older age-classes such that few fish greater than age-10 remained in the population under a realistic harvest mortality scenario. This age-truncation was qualitatively comparable to data from aggregate age distributions reported from three commercially harvested lakes in Maine. Because the loss of older fish may compromise population viability, this model is a valuable guidance tool for managers to craft regulation of this growing fishery.

Maine↗

A decade of Indigenous knowledge research in the Yukon River basin: Reflection on “Indigenous observations of change in the lower Yukon River basin, Alaska”

Herman-Mercer reflects on her first article" Indigenous Observations of Change in the Lower Yukon River Basin, Alaska." The observations and knowledge presented in this study have become part of an ever-growing catalog of studies representing, and part of a chorus of Indigenous communities across the Arctic and Subarctic conveying, the impacts of climate change in this region. The broad observations of environmental change reported in Indigenous Observations 2011, including impacts to subsistence and safety, are more dire and apparent than ten years ago when this article was published. Instances of diseased salmon continue to be reported by subsistence fishers, and the salmon runs have declined so severely since Indigenous Observations 2011 was published that there have been several years in which the commercial and or the subsistence salmon fishery was closed on the Yukon River, with impacts to household economies, food security, and culture. The then-new dangers associated with travel on river ice continue to be a concern across the Yukon River where the thinner river ice and inconsistent freeze up and break up have become the norm.

Alaska↗

The Columbia River Research Laboratory

The mission of the Columbia River Research Laboratory is to serve the public by providing scientific information to support the stewardship of our Nation's fish and aquatic resources, with emphasis on the Columbia River basin. As a part of the U.S. Geological Survey (USGS) Western Fisheries Research Center, we conduct objective, relevant research and seek partnerships to help fulfill this mission.

Fact Sheet↗

The determination, assessment, and design of "in-stream value" studies for the northern Great Plains region

An extensive literature review was conducted to determine the discharge requirements of various components of a warm water fishery. Where exact hydrologic parameters were not measured directly in individual studies, they were estimated from inferred statements and knowledge of hydrologic variables leading to certain instream conditions. From this information it was possible to determine which components of the stream community would be most seriously affected by reduced discharges. In addition, a number of different methods used in the recommendation of minimum streamflows was reviewed. These methods were evaluated for their reliability and ease of use. It was concluded that a method for recommending minimum discharges should not sacrifice reliability for expediency. A methodology is proposed for the recommendation of minimum discharges for a warm water fishery. This method utilizes field measurements of critical stream areas and biological criteria determined from the used of indicator species. For large rivers, migration and spawning requirements are analyzed using the paddlefish ( Polyodon spathula ) as the indicator species. For smaller rivers, the suggested indicator species is the sauger ( Stizostedion canadense ). Rearing flows are determined on the basis of stream productivity by analyzing macroinvertebrate habits, and on the basis of fish habitat typing. The indicator species for determining adequate fish habitat is the stonecat ( Notorus flavus ). A number of variables were identified which might require a greater amount of in-stream flow than the fishery, per se. These variables included streamflow needs for riparian and other sub-irrigated vegetation, water quality parameters, anchor ice formation, and the relationship between discharge and sediment yield. Information concerning these variables is insufficient at this time to determine whether a variable will "over-ride" the streamflow requirement for the fishery itself. Further research is needed in these areas, and several investigative methods for conducting such research are proposed.

Great Plains↗