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At least 397 records · Page 22Linked to original sources

USGS2019

Encylopedia of Caves

For many people, a visit to a cave is a wondrous event directing our minds to ponder the mysteries presented by these unique places and inspiring questions: How old is the cave? What was the role of water in forming the cave and where did the water come from? How is the cave connected to the surface environment? These are intriguing questions to ask, and karst scientists use isotope geochemistry to help solve these mysteries. Isotopes are atoms of the same chemical element that have the same number of protons but vary in their number of neutrons. As a result of their atomic mass difference, isotopes of a single element may exhibit slightly different chemical behavior. Radioisotopes are unstable and the nucleus of a parent isotope will spontaneously break apart (decay), releasing energy and changing into another element (daughter product) by loss or gain of protons, neutrons, or electrons. Stable isotopes, as implied by the name, are stable and do not spontaneously decay. These two types of isotopes are used widely by scientists to understand ancient and modern karst systems. Generally, radioisotopes are used for absolute dating karst water, cave sediments, cave formations (speleothems), and other material preserved in caves (such as bones). Stable isotopes can provide information about relative ages of cave water and speleothems. An absolute age provides a numeric date—such as 100,000 years old—whereas a relative age provides information that something is older or younger than something else—such as cave art is younger than a speleothem found in the same cave. Stable isotopes are used to study ancient karst systems because isotopic signals of past climate (paleoclimate) and environmental conditions (paleoenvironment) are preserved in speleothems and sediments. Stable isotopes are also used to understand modern systems, primarily through studies that distinguish sources of karst water, cave air, or contaminants, mixing of those sources, and biologic or chemical reactions that process compounds, such as breakdown of contaminants or organic matter. The variation in mass among isotopes is small, and isotope abundances are measured as a ratio of a common isotope to its less common isotopic counterparts (stable isotopes) or the abundance of a parent compared to daughter isotope (radioisotopes). As an example, hydrogen (H) has three naturally occurring isotopes. Most H comprises one proton (1H), but the rarer stable isotope (called deuterium) comprises one proton and one neutron (2H), and the radioisotope (called tritium) comprises one proton and two neutrons (3H). Because scientists use the minute differences in isotopes to test hypotheses, a scientist must understand the accuracy, precision, and error of the available methods, the assumptions about the chemical conditions of interest, and the limitations of the isotopic method being used. Many isotopic studies employ multiple isotopic tracers to better leverage the strengths and offset the limitations of using a single isotope. This article focuses on isotopes used to study the geology and hydrology of caves, but much additional isotopic work has been used to characterize the biology of caves.

Book chapter↗

USGS2000

Contaminant effect endpoints in terrestrial vertebrates at and above the individual level

Use of biochemical, physiological, anatomical, reproductive and behavioral characteristics of wild terrestrial vertebrates to assess contaminant exposure and effects has become commonplace over the past 3 decades. At the level of the individual organism, response patterns have been associated with and sometimes causally linked to contaminant exposure. However, such responses at the organismal level are rarely associated with or causally linked to effects at the population level. Although the ultimate goal of ecotoxicology is the protection of populations, communities, and ecosystems, most of the existing science and regulatory legislation focus on the level of the individual. Consequently, much of this overview concentrates on contaminant effects at the organismal level, with some extrapolation to higher-level effects. In this chapter, we review the state of the science for the evaluation of biotic end-points used to assess contaminant exposure and effects at or above the level of the individual. In addition, we describe extant contaminant concentration thresholds, guidelines, or standards (toxicant criteria) in environmental matrices (e.g., water, soil, sediment, foods) that have been developed to protect wild terrestrial vertebrates. Suggestions are provided to develop and embellish the use and value of such endpoints and criteria for extrapolation of effects to higher levels of biological organization. Increasing focus on populations, communities, and ecosystems is needed to develop biologically meaningful regulatory guidelines that will protect natural resources.

Book chapter↗

USGS2019

Introduction: Defining and interpreting ecological disturbances

Within the field of ecology, disturbance can be defined as a physical force, agent, or process, either abiotic or biotic, causing a perturbation or stress, to an ecological component or system, relative to a specified reference state and/or system. Disturbance drive ecosystems, and our understanding of how disturbances interact with biological diversity and scales of space, time, and ecological complexity, have matured over a century of advancement in ecology since early ideas of perturbations and community organization were first formalized. Throughout this book, we approach a set of unifying framing questions for disturbance ecology, including: How can disturbances be categorized in meaningful ways? How do we address scale in disturbance ecology? How does geographic context influence ecological consequences of disturbance, in the near and longer terms? In this introductory chapter, we provide an overview of disturbance ecology and the related topics of diversity and scale that are fundamental to understanding the dynamics of perturbed ecosystems. Subsequently, we outline recent advances in disturbance ecology, which have facilitated greater understanding about dynamic systems and context dependencies. These, in turn, have provided richer insights into the complex manner in which ecosystems change under stress. We survey analytical and methodological advances that are expanding the data flows available to inform disturbance ecology as well as the statistical tools available to investigate disturbance dynamics and ecosystem structure and function. Finally, we lay out four core themes threaded through the remainder of the book: (1) fundamental mechanisms related to ecological theory drive complex system behaviors, including the existence of thresholds; (2) dynamics of ecological disturbance are context-dependent and can be unpredictable; (3) antecedent conditions and the legacies of past disturbances influence contemporary ecosystem dynamics; and (4) natural and anthropogenic disturbances interact in complex ways. Summaries are provided for each of the book’s remaining chapters, highlighting how that material relates to these four core themes. In sum, in this introductory chapter we seek to set a foundation for concepts to ground the remainder of the book. By highlighting constraints in past research and identifying research frontiers, we hope to provide a path forward for advancements in disturbance ecology.

Book chapter↗

USGS2020

Dispersal of hatchling Ouachita map turtles (Graptemys ouachitensis) from natural nests on the lower Wisconsin River, Wisconsin, USA

Despite its importance to individual fitness and population dynamics, the dispersal behaviors of most neonate freshwater turtles after nest emergence are poorly known. We studied the initial dispersal tendencies of neonate Ouachita map turtles ( Graptemys ouachitensis ) exiting natural nests during 2015–2017 along the Wisconsin River, Wisconsin. Overall, dispersal was nonrandom, and hatchlings largely oriented toward the nearest substantial vegetative cover, a woodland north of the nesting area. However, variation sometimes occurred in routes taken among hatchlings within a clutch. Directional changes within an individual's dispersal track, including route reversals, were also observed. As our work appears to be the first to use standalone trail cameras as a primary data-gathering tool for a hatchling dispersal study, it highlights the potential benefits and limitations of this technique for similar research.

Wisconsin↗

USGS2022

New frontiers in bird migration research

Bird migrations are impressive behavioral phenomena, representing complex spatiotemporal strategies to balance costs of living while maximizing fitness. The field of bird migration research has made great strides over the past decades, yet fundamental gaps remain. Technologies have sparked a transformation in the study of bird migration research by revealing remarkable insights into the underlying behavioral, cognitive, physiological and evolutionary mechanisms of these diverse journeys. Here, we aim to encourage broad discussions and promote future studies by highlighting research fields that are characterized by major knowledge gaps or conflicting evidence, namely the fields of navigation, social learning, individual development, energetics and conservation. We approach each topic by summarizing the current state of knowledge and provide a future outlook of ideas and state-of-the-art methods to further advance the field. Integrating knowledge across these disciplines will allow us to understand the adaptive abilities of different species and to develop effective conservation strategies in a rapidly changing world.

Current Biology↗

USGS2007

Evidence for exploitative competition: Comparative foraging behavior and roosting ecology of short-tailed fruit bats (Phyllostomidae)

Chestnut short-tailed bats, Carollia castanea, and Seba's short-tailed bats, C. perspicillata (Phyllostomidae), were radio-tracked (N = 1593 positions) in lowland rain forest at Tiputini Biodiversity Station, Orellana Province, Ecuador. For 11 C. castanea, mean home range was 6.8 ?? 2.2 ha, mean core-use area was 1.7 ?? 0.8 ha, and mean long axis across home range was 438 ?? 106 m. For three C. perspicillata, mean home range was 5.5 ?? 1.7 ha, mean core-use area was 1.3 ?? 0.6 ha, and mean long axis was 493 ?? 172 m. Groups of less than five C. castanea occupied day-roosts in earthen cavities that undercut banks the Tiputini River. Carollia perspicillata used tree hollows and buildings as day-roosts. Interspecific and intraspecific overlap among short-tailed bats occurred in core-use areas associated with clumps of fruiting Piper hispidum (peppers) and Cecropia sciadophylla. Piper hispidum seeds were present in 80 percent of the fecal samples from C. castanea and 56 percent of samples from C. perspicillata. Carollia perspicillata handled pepper fruits significantly faster than C. castanea; however, C. castanea commenced foraging before C. perspicillata emerged from day-roosts. Evidence for exploitative competition between C. castanea and C. perspicillata is suggested by our observations that 95 percent of ripe P. hispidum fruits available at sunset disappear before sunrise (N = 74 marked fruits). Piper hispidum plants produced zero to 12 ripe infructescences per plant each night during peak production. Few ripe infructescences of P. hispidum were available during the dry season; however, ripe infructescences of C. sciadophylla, remained abundant. ?? 2007 The Author(s) Journal compilation ?? 2007 by The Association for Tropical Biology and Conservation.

Biotropica↗

USGS1994

Grizzly bear use of army cutworm moths in the Yellowstone Ecosystem

The ecology of alpine aggregations of army cutworm moths ( Euxoa auxiliaris ) and the feeding behavior of grizzly bears ( Ursus arctos horribilis ) at these areas were studied in the Yellowstone ecosystem from 1988 to 1991. Army cutworm moths migrate to mountain regions each summer to feed at night on the nectar of alpine and subalpine flowers, and during the day they seek shelter under various rock formations. Grizzly bears were observed feeding almost exclusively on moths up to 3 months each summer at the 10 moth-aggregation areas we identified. Fifty-one different grizzly bears were observed feeding at 4 of these areas during a single day in August 1991. Army cutworm moths are a preferred source of nutrition for many grizzly bears in the Yellowstone ecosystem and represent a high quality food that is available during hyperphagia.

Idaho, Montana, Wyoming↗

USGS2008

Thiamine Deficiency Complex Workshop final report: November 6-7, 2008, Ann Arbor, MI

Fry mortality which was first observed in the late 1960s in Great Lakes salmonines and in Baltic Sea salmon in 1974 has now been linked to thiamine deficiency (historically referred to as Early Mortality Syndrome, or EMS and M74, respectively). Over the past 14 years significant strides have been made in our understanding of this perplexing problem. It is now known that thiamine deficiency causes embryonic mortality in these salmonids. Both overt mortality and secondary effects of thiamine deficiency are observed in juvenile and adult animals. Collectively the morbidity and mortality (fry and adult mortality, secondary metabolic and behavior affects in juveniles and adult fish) are referred to as Thiamine Deficiency Complex (TDC). A workshop was held in Ann Arbor, MI on 6-7 November 2008 that brought together 38 federal, state, provincial, tribal and university scientists to share information, present data and discuss the latest observations on thiamine status of aquatic animals with thiamine deficiency and the causative agent, thiaminase. Twenty presentations (13 oral and 7 posters) detailed current knowledge. In Lake Huron, low alewife Alosa pseudoharengus abundance has persisted and egg thiamine concentrations in salmonines continue to increase, along with evidence of natural reproduction in lake trout Salvelinus namaycush. Lake Michigan Chinook salmon Oncorhynchus tshawytscha appear to have a lower thiamine requirement than other salmonids in the lake. Lake Ontario American eel Anguilla rostrata foraging on alewife have approximately one third the muscle thiamine compared to eels not feeding on alewife, suggesting that eels may be suffering from thiamine deficiency. Secondary effects of low thiamine exist in Great Lakes salmonines and should not be ignored. Thiaminase activity in dreissenid mussels is extremely high but a connection to TDC has not been made. Thiaminase in net plankton was found more consistently in lakes Michigan and Ontario than other lakes evaluated. The biological role of thiaminase I, associated with thiamine deficiency, remains to be determined whereas thiaminase II has been reported to be part of a salvage pathway leading to thiamine synthesis. The use of gene array technology and 3-dimensional histology is adding new understanding to the affects of thiamine deficiency. Research is needed to determine the thiamine status of species feeding on dreissenids, the environmental sources of thiaminase and the biological role of thiaminase I.

Research Status Report↗

USGS2011

User's manual for the National Water-Quality Assessment Program Invertebrate Data Analysis System (IDAS) software, version 5

The Invertebrate Data Analysis System (IDAS) software was developed to provide an accurate, consistent, and efficient mechanism for analyzing invertebrate data collected as part of the U.S. Geological Survey National Water-Quality Assessment (NAWQA) Program. The IDAS software is a stand-alone program for personal computers that run Microsoft Windows(Registered). It allows users to read data downloaded from the NAWQA Program Biological Transactional Database (Bio-TDB) or to import data from other sources either as Microsoft Excel(Registered) or Microsoft Access(Registered) files. The program consists of five modules: Edit Data, Data Preparation, Calculate Community Metrics, Calculate Diversities and Similarities, and Data Export. The Edit Data module allows the user to subset data on the basis of taxonomy or sample type, extract a random subsample of data, combine or delete data, summarize distributions, resolve ambiguous taxa (see glossary) and conditional/provisional taxa, import non-NAWQA data, and maintain and create files of invertebrate attributes that are used in the calculation of invertebrate metrics. The Data Preparation module allows the user to select the type(s) of sample(s) to process, calculate densities, delete taxa on the basis of laboratory processing notes, delete pupae or terrestrial adults, combine lifestages or keep them separate, select a lowest taxonomic level for analysis, delete rare taxa on the basis of the number of sites where a taxon occurs and (or) the abundance of a taxon in a sample, and resolve taxonomic ambiguities by one of four methods. The Calculate Community Metrics module allows the user to calculate 184 community metrics, including metrics based on organism tolerances, functional feeding groups, and behavior. The Calculate Diversities and Similarities module allows the user to calculate nine diversity and eight similarity indices. The Data Export module allows the user to export data to other software packages (CANOCO, Primer, PC-ORD, MVSP) and produce tables of community data that can be imported into spreadsheet, database, graphics, statistics, and word-processing programs. The IDAS program facilitates the documentation of analyses by keeping a log of the data that are processed, the files that are generated, and the program settings used to process the data. Though the IDAS program was developed to process NAWQA Program invertebrate data downloaded from Bio-TDB, the Edit Data module includes tools that can be used to convert non-NAWQA data into Bio-TDB format. Consequently, the data manipulation, analysis, and export procedures provided by the IDAS program can be used to process data generated outside of the NAWQA Program.

Techniques and Methods↗

USGS2003

Pop-up archival transmitting (PAT) tags: A method to investigate the migration and behavior of Pacific halibut ( Hippoglossus stenolepis ) in the Gulf of Alaska

Pop-up archival transmitting (PAT) tags provide a fisheries-independent method of collecting environmental preference data (depth and ambient water temperature) and migration distance. In this study, we evaluate the use of pop-up archival transmitting tags as a method to investigate demersal fish. We report the results from eight pop-up archival transmitting tagged Pacific halibut Hippoglossus stenolepis (from 107 to 165 cm FL) that were released in and around Resurrection Bay, Alaska. Commercial fishermen recovered three tags, while five tags transmitted data to Argos satellites. Horizontal migration was not consistent among fish as four Pacific halibut remained in the vicinity of release while the other four traveled up to 358 km from the release site. Vertical movement was not consistent among fish or over time; however, they spent most of their time at depths of 150 to 350 m. The minimum and maximum depths reached by any of the Pacific halibut were 2 m and 502 m, respectively. The fish preferred water temperatures of approximately 6°C, but experienced temperatures between 4.3 and 12.2°C. Light attenuation with depth prevented geolocation software and light sensing hardware from accurately estimating geoposition for the majority of days. The methods, adapted from investigations on large pelagic fish, proved to be effective for studying Pacific halibut in the northern Gulf of Alaska. PAT tags allowed us to obtain high accuracy locations of the fish at the end of the tag deployments as well as preliminary data to identify approximate seasonal locations and to characterize their depth and temperature characteristics. By using PAT tags, we will be able to ensure tag returns during the winter season (which is closed to fishing) and gain valuable biological information even if fish migrate large distances or to unexpected locations.

Alaska Fishery Research Bulletin↗

USGS2025

DNA metabarcoding and video camera collars yield different inferences about the summer diet of an arctic ungulate

The diets of wild ungulates are a foundational component of their ecology, influencing their behavior, body condition, and demography. With changing environmental conditions, there is a significant need to identify important forage items for ungulates, but this has often proved challenging. Declines in several barren-ground caribou herds across the North American Arctic have raised concerns about the influence of climate change on caribou forage conditions. Shifts in plant phenology, biomass, quality, and composition may be influencing caribou diets and subsequently affecting their body condition and demographic rates. Although forage is a primary driver of barren-ground caribou behavior and population dynamics, there is limited recent information about the specific foods they consume, and uncertainty about appropriate methods for identifying those foods. Investigators are increasingly using fecal DNA metabarcoding and video camera collars to assess ungulate diets, but comparative studies of these approaches are lacking. To examine the summer diets of barren-ground caribou, we used both fecal metabarcoding and video camera collars to identify forage used by the Porcupine caribou herd, which spans the Alaska–Yukon border. In 2021, we sampled the diets of adult females by collecting fecal samples and observing collar videos during 4 sampling occasions. We found that caribou consumed very specific forage items, and those items varied markedly across the growing season. Caribou predominantly consumed graminoids and lichens during early summer, and shrubs and forbs later in the season. Metabarcoding and video data provided significantly different estimates of diet for all taxonomic levels we evaluated, and inferences from the two approaches were often disparate. Metabarcoding failed to detect some items frequently consumed in videos, such as lichens, and indicated high use of other items rarely consumed, such as mosses. We found that video data provided greater taxonomic diversity and resolution for vascular plants and lichens, and more closely aligned with past research and biological expectations than data from fecal metabarcoding. Additional research is needed to be able to use these methods to identify the biomass of different forage items consumed.

Alaska, Yukon↗

USGS2025

Characterization of the long-distance dispersal kernel of white-tailed deer and evaluating its impact on chronic wasting disease spread in Wisconsin

Chronic wasting disease (CWD) is a fatal neurodegenerative disease infecting cervids. It is highly contagious and caused by misfolded prions that propagate via templated conformational conversion of the cervid’s normal prion protein. Prevalence of CWD in free-ranging deer in North America is mostly low, but in some regions local prevalence has reached 80%. CWD prions can be transmitted via direct contact with infected individuals or indirectly through the environment. Infected individuals shed prions through feces, urine, saliva or carcasses, and prions have long environmental persistence. Long-distance dispersal of infected deer poses a significant risk for CWD spread. We propose an integrodifference equation (IDE) model to capture CWD dynamics and the consequences of long-distance dispersal behavior in white-tailed deer (WTD, Odocoileus virginianus ). A diffusion-settling model characterizes long-distance dispersal kernels, accommodating hypothetical dispersal behaviors through time-dependent settling rate functions. Three new closed-form dispersal kernels are approximated using Laplace’s method and parameterized with GPS location data collected from WTD in Wisconsin, USA. Settling rates reflecting ongoing sensitivity to stimuli which prompt deer to disperse from their natal home range give the most supported long-distance dispersal kernel. Impact of long-distance dispersal on CWD spread is quantified using the IDE model. At high population densities, long-distance dispersal can magnify CWD spread by a factor of four. At lower population densities single infected individuals cannot initiate an outbreak, but CWD may still spread due to the accumulation of environmental hazard from prions behind the wave of invasion, possibly presenting substantial management challenges.

Wisconsin↗

USGS2002

The central arctic caribou herd

From the mid-1970s through the mid-1980s, use of calving and summer habitats by Central Arctic herd caribou ( Rangifer tarandus granti ) declined near petroleum development infrastructure on Alaska's arctic coastal plain (Cameron et al. 1979; Cameron and Whitten 1980, Smith and Cameron 1983. Whitten and Cameron 1983a, 1985: Dau and Cameron 1986). With surface development continuing to expand westward from the Prudhoe Bay petroleum development area (Fig. 4.1), concerns arose that the resultant cumulative losses of habitat would eventually reduce productivity of the caribou herd. Specifically, reduced access of adult females to preferred foraging areas might adversely affect growth and fattening (Elison et al. 1986. Clough et al. 1987), in turn depressing calf production (Dauphiné 1976, Thomas 1982, Reimers 1983, White 1983, Eloranta and Nieminen 1986. Lenvik et al. 1988, Thomas and Kiliaan 1991) and survival (Haukioja and Salovaara 1978, Rognmo et al. 1983, Skogland 1984, Eloranta and Nieminen 1986, Adamczewski et al. 1987). Those concerns, though justified in theory, lacked empirical support. With industrial development in arctic Alaska virtually unprecedented, there was little basis for predicting the extent and duration of habitat loss, much less the secondary short- and long-term effects on the well-being of a particular caribou herd. Furthermore, despite a general acceptance that body condition and fecundity of the females are functionally related for reindeer and caribou, it seemed unlikely that any single model would apply to all subspecies of Rangifer , and perhaps not even within a subspecies in different geographic regions. We therefore lacked a complete understanding of the behavioral responses of arctic caribou to industrial development, the manner in which access to habitats might be affected, and how changes in habitat use might translate into measurable effects on fecundity and herd growth rate. Our study addressed the following objectives: 1) estimate variation in the size and productivity of the Central Arctic herd; 2) estimate changes in the distribution and movements of Central Arctic herd caribou in relation to the oil field development; 3) estimate the relationships between body condition and reproductive performance of female Central Arctic herd caribou, and 4) compare the body condition, reproductive success, and offspring survival of females under disturbance-free conditions (i.e., east of the Sagavanirktok River) with the status of those exposed to petroleum-related development (i.e., west of the Sagavanirktok River).

Alaska, Northwest Territories, Yukon Territory↗

USGS2013

Effects of sex pheromones and sexual maturation on locomotor activity in female sea lamprey (Petromyzon marinus)

Synchronization of male and female locomotor rhythmicity can play a vital role in ensuring reproductive success. Several physiological and environmental factors alter these locomotor rhythms. As sea lamprey, Petromyzon marinus, progress through their life cycle, their locomotor activity rhythm changes multiple times. The goal of this study was to elucidate the activity patterns of adult female sea lamprey during the sexual maturation process and discern the interactions of these patterns with exposure to male pheromones. During these stages, preovulated and ovulated adult females are exposed to sex pheromone compounds, which are released by spermiated males and attract ovulated females to the nest for spawning. The locomotor behavior of adult females was monitored in a natural stream with a passive integrated tag responder system as they matured, and they were exposed to a sex pheromone treatment (spermiated male washings) or a control (prespermiated male washings). Results showed that, dependent on the hour of day, male sex pheromone compounds reduce total activity (p < 0.05) and cause increases in activity during several daytime hours in preovulated and ovulated females. These results are one of the first examples of how sex pheromones modulate a locomotor rhythm in a vertebrate, and they suggest that the interaction between maturity stage and sex pheromone exposure contributes to the differential locomotor rhythms found in adult female sea lamprey. This phenomenon may contribute to the reproductive synchrony of mature adults, thus increasing reproductive success in this species.

Journal of Biological Rhythms↗

USGS2014

Distribution and habitat associations of juvenile Common Snook in the lower Rio Grande, Texas

Common Snook Centropomus undecimalis were once abundant off the Texas coast, but these populations are now characterized by low abundance and erratic recruitment. Most research concerning Common Snook in North America has been conducted in Florida and very little is known about the specific biology and habitat needs of Common Snook in Texas. The primary objective of this study was to describe the habitat use patterns of juvenile Common Snook and their role in the fish assemblage in the lower portion of the Rio Grande, Texas. Secondarily, we documented the relationship between age and juvenile reproductive development. Fish were collected during January–March 2006 from the lower 51.5 km of the Rio Grande using a bottom trawl and boat-mounted electrofisher. Measurements of water quality and other habitat traits were recorded at each sampling site. We captured 225 Common Snook exclusively in freshwater habitats above river kilometer 12.9. The distribution of juvenile Common Snook was not random, but influenced primarily by turbidity and dissolved oxygen. Sex differentiation and gonadal development based on histological examination of gonads established that age-1 and age-2 Common Snook were juvenile, prepubertal males. There was no difference between the age groups in their overall distribution in the river. However, age-2 Common Snook were associated with deeper areas with faster currents, higher conductivity, and steeper banks. Overall, Common Snook in the lower Rio Grande show substantial differences in habitat use than their counterparts in other parts of the range of the species, but it is unclear whether this is due to differences in habitat availability, behavioral plasticity, or some combination thereof.

Texas↗

USGS2021

Forecasting community reassembly using climate-linked spatio-temporal ecosystem models

Ecosystems are increasingly impacted by human activities, altering linkages among physical and biological components. Spatial community reassembly occurs when these human impacts modify the spatial overlap between system components, and there is need for practical tools to forecast spatial community reassembly at landscape scales using monitoring data. To illustrate a new approach, we extend a generalization of empirical orthogonal function (EOF) analysis, which involves a spatio‐temporal ecosystem model that approximates coupled physical, biological and human dynamics. We then demonstrate its application to five trophic levels for the eastern Bering Sea by fitting to multiple, spatially unbalanced datasets measuring physical characteristics (temperature measurements and climate‐linked forecasts), primary producers (spring and fall size‐fractionated chlorophyll‐a), secondary producers (copepods), juveniles (age‐0 walleye pollock), adult consumers (five commercially important fishes), human activities (seasonal fishing effort) and mobile predators (seabirds). We identify the spatial niche for each ecosystem component, as well as dominant modes of variability that are highly correlated with a known bottom–up driver of dynamics. We then measure spatial overlap between interacting variables (using Schoener's‐D) and identify that age‐0 pollock have decreased spatial overlap with copepods and increased overlap with adult pollock during warm years, and also that adult pollock have increased overlap with arrowtooth flounder and decreased overlap with catcher–processor fishing effort during these warm years. Given the warming conditions that are projected for the coming decade, the model forecasts increased prey and competitor overlap involving adult pollock (between age‐0 pollock, adult pollock and arrowtooth flounder) and decreased overlap with the copepod forage base and with the catcher–processor fishery during future warming. We recommend that joint species distribution models be extended to incorporate ‘ecological teleconnections' (correlations between distant locations arising from known mechanisms) arising from behavioral adaptation by mobile animals as well as passive advection of nutrients and planktonic juvenile stages.

Ecography↗

USGS1997

Chemical weathering of a soil chronosequence on granitoid alluvium: II. Mineralogic and isotopic constraints on the behavior of strontium

The use of strontium isotopes to evaluate mineral weathering and identify sources of base cations in catchment waters requires an understanding of the behavior of Sr in the soil environment as a function of time. Our approach is to model the temporal evolution of 87 Sr/ 86 Sr of the cation exchange pool in a soil chronosequence developed on alluvium derived from central Sierra Nevada granitoids during the past 3 Ma. With increasing soil age, 87 Sr/ 86 Sr of ammonium-acetate extractable Sr initially decreases from values typical of K-feldspar to those of plagioclase and hornblende and then remains constant, even though plagioclase and hornblende are absent from the soils after approximately 1 Ma of weathering. The temporal variation of 87 Sr/ 86 Sr of exchangeable Sr is modeled by progressively equilibrating Sr derived from mineral weathering and atmospheric deposition with Sr on exchange sites as waters infiltrate a soil column. Observed decreases in quartz-normalized modal abundances of plagioclase, hornblende, and K-feldspar with time, and the distinct 87 Sr/ 86 Sr values of these minerals can be used to calculate Sr flux from weathering reactions. Hydrobiotites in the soils have nearly constant modal abundances, chemistry, and 87 Sr/ 86 Sr over the chronosequence and provide negligible Sr input to weathering solutions. The model requires time and soil horizon-dependent changes in the amount of exchangeable Sr and the efficiency of Sr exchange, as well as a biologic cycling term. The model predicts that exchangeable Sr initially has 87 Sr/ 86 Sr identical to that of K-feldspar, and thus could be dominated by Sr leached from K-feldspar following deposition of the alluvium. The maximum value of 87 Sr/ 86 Sr observed in dilute stream waters associated with granitoids of the Yosemite region is likewise similar to that of the K-feldspars, suggesting that K-feldspar and not biotite may be the dominant source of radiogenic Sr in the streams. This study reveals that, when attempting to use Strontium isotopes to identify sources of base cations in catchment waters and biomass, both preferential leaching of Sr from minerals during incipient soil development and changing Sr exchange efficiency must be considered along with chemical contributions due to mineral dissolution.

Geochimica et Cosmochimica Acta↗

USGS2020

Sibship reconstruction with SNPs illuminates the scope of a cryptic invasion of Asian Swamp Eels (Monopterus albus) in Georgia, USA

Cryptic invasive species are particularly problematic to study, manage, and control because of the difficulty detecting these species within their invaded habitats. Such is the case of the Asian Swamp Eel ( Monopterus albus ; ASE) where it is established in vegetated marshes along the Chattahoochee River, Georgia. Adult eels have been nearly impossible to detect or quantify with traditional sampling, although leaf-litter trapping of juvenile ASEs has been somewhat successful. In this study, we leveraged a collection of juveniles from the 2015 cohort and used single-nucleotide polymorphisms to reconstruct sibship among these juveniles in COLONY. Sibship reconstruction allowed us to learn about adult breeding behaviors and provided the first quantified estimates of breeder abundance. Pedigree reconstruction revealed that adults of both sexes were polygamous and likely traveled up to 0.5 km among marsh habitats during a single breeding season. Estimates of the number of breeding adults contributing to offspring ( N s ) and the effective number of breeders ( N b ) indicated an approximate minimum bound of 100 breeding adults in the marshes in 2015. Our study updated the invasion status of a cryptic population formerly riddled with uncertainty, highlighting that low captures of adult eels in the study area have been the result of low detectability, not low abundance. Given that low detectability would likely hinder removal efforts, our results suggest that future efforts could focus on suppression of ASE abundance when they are most vulnerable to capture and containing the spatial extent of the invasion.

Georgia↗