USGS ScienceSearch

SEARCH · USGS Science

Results for “Lipids”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 379 records · Page 21Linked to original sources

Diet composition and provisioning rates of nestlings determine reproductive success in a subtropical seabird

Understanding how both quality and quantity of prey affect the population dynamics of marine predators is a crucial step toward predicting the effects of environmental perturbations on population-level processes. The Junk Food Hypothesis, which posits that energetic content of prey species may influence reproductive capacity of marine top predators regardless of prey availability, has been proposed as a mechanism by which changes in prey populations could affect predator populations in high latitude systems; however, support for this hypothesis has been inconsistent across studies, and further data are needed to elucidate variation in the relative importance of prey quantity and quality, both among predator species and across ecological systems. We tested the relative importance of prey quantity and quality to nestling survival in the eastern brown pelican Pelecanus occidentalis carolinensis across 9 breeding colonies in the northern Gulf of Mexico that varied in underlying availability of a key prey resource, the Gulf menhaden Brevoortia patronus . Both feeding frequency and meal mass were significantly correlated to energy provisioning rates and nestling survival, while energy density of meals had little effect on either metric. Compared to previous results from cold-water systems, we found lower and less variable energy densities (4.4 kJ g -1 , vs. 5.2 to 6.5 kJ g -1 in other studies) and lipid content (9% dry mass, vs. 16 to 23% in other studies) of common prey items. While Gulf menhaden was the most common prey species at all colonies, the proportion of menhaden fed to nestlings varied and was not strongly correlated to fledging success. We conclude that quantity rather than quality of prey, particularly small schooling fish, is the main driver of brown pelican reproductive success in this system, and that environmental perturbations affecting biomass, distribution, and abundance of forage fish could substantially affect brown pelican reproductive success.

Gulf of Mexico

Extreme reduction in nutritional value of a key forage fish during the Pacific marine heatwave of 2014–2016

Pacific sand lance Ammodytes personatus are a key forage fish in the North Pacific for many species of salmon, groundfish, seabirds, and marine mammals and have historically been important to predators in relatively warm years. However, extreme declines in the nutritional value of sand lance in Prince William Sound, Alaska, USA, during 2012-2016 indicate that energy transfer from lower trophic levels to predators via sand lance may have been disrupted during the North Pacific marine heatwave in 2015 and 2016. Nutritional value (length, energy density, and whole-body energy) was measured in age-0 and age-1 sand lance collected during July in cool (2012-2013) and increasingly warm (2014-2016) years. The value of age-0 fish was relatively stable, with only minor differences among years for length and whole-body energy. By contrast, the value of age-1 fish significantly declined in 2015, and by 2016 they were 38% shorter and 13% lower in energy density compared to cooler years. This contributed to significant declines in whole-body energy of 44% in 2015 and 89% in 2016 compared to cooler years (2012-2014). The 2015 sand lance cohort experienced little growth or lipid accumulation from July 2015 at age-0 to July 2016 at age-1. This effective disruption of energy flow through pelagic food webs probably contributed to population declines and/or breeding failures observed among several predators in the Gulf of Alaska and suggests that tipping points were reached during the heatwave.

Marine Ecology Progress Series

Evaluation of potential protective factors against metabolic syndrome in bottlenose dolphins:feeding and activity patterns of dolphins in Sarasota Bay, Florida

Free-ranging bottlenose dolphins (Tursiops truncatus) living in Sarasota Bay, Florida appear to have a lower risk of developing insulin resistance and metabolic syndrome compared to a group of dolphins managed under human care. Similar to humans, differences in diet and activity cycles between these groups may explain why Sarasota dolphins have lower insulin, glucose, and lipids. To identify potential protective factors against metabolic syndrome, existing and new data were incorporated to describe feeding and activity patterns of the Sarasota Bay wild dolphin community. Sarasota dolphins eat a wide variety of live fish and spend 10–20% of daylight hours foraging and feeding. Feeding occurs throughout the day, with the dolphins eating small proportions of their total daily intake in brief bouts. The natural pattern of wild dolphins is to feed as necessary and possible at any time of the day or night. Wild dolphins rarely eat dead fish or consume large amounts of prey in concentrated time periods. Wild dolphins are active throughout the day and night; they may engage in bouts of each key activity category at any time during daytime. Dive patterns of radio-tagged dolphins varied only slightly with time of day. Travel rates may be slightly lower at night, suggesting a diurnal rhythm, albeit not one involving complete, extended rest. In comparison, the managed dolphins are older; often fed a smaller variety of frozen-thawed fish types; fed fish species not in their natural diet; feedings and engaged activities are often during the day; and they are fed larger but fewer meals. In summary, potential protective factors against metabolic syndrome in dolphins may include young age, activity, and small meals fed throughout the day and night, and specific fish nutrients. These protective factors against insulin resistance and type 2 diabetes are similar to those reported in humans. Further studies may benefit humans and dolphins.

Florida

Prevalence of pelagic diatoms and harmful algae in tellinid bivalve diets during record low sea ice in the Pacific Arctic determined by DNA metabarcoding

Understanding changes at the base of the marine food web in the rapidly transforming Arctic is essential for predicting and evaluating ecosystem dynamics. The northern Bering Sea experienced record low sea ice in 2018, followed by the second lowest in 2019, highlighting the urgency of the issue for this region. In this study, we investigated the diet of the clam Macoma calcarea in the Pacific Arctic using DNA metabarcoding, employing 18S and rbcL markers to identify dietary components. Our findings revealed a strong dependence on pelagic diatoms, particularly Chaetoceros sp., with a near absence of ice algae in the clam diet. This pattern reflects the lack of lipid-rich ice algal production during these low sea ice events. Additionally, our analysis detected algae capable of producing harmful toxins, notably Alexandrium dinoflagellates, in the clam diet, underscoring the need for increased monitoring due to potential ecosystem and human health risks. This study demonstrates the utility of DNA metabarcoding in unraveling the complex dynamics of Arctic marine food webs and pelagic-benthic coupling, providing a glimpse of future conditions in a rapidly changing environment.

Bering Sea, Chukchi Sea

Hepatic gene expression profiling of American kestrels (Falco sparverius) exposed in ovo to three alternative brominated flame retardants

A number of brominated flame retardants (BFRs) have been reported to interfere with the thyroid signaling pathway and cause oxidative stress in birds, yet the underlying shifts in gene expression associated with these effects remain poorly understood. In this study, we measured hepatic transcriptional responses of 31 genes in American kestrel ( Falco sparverius ) hatchlings following in ovo exposure to one of three high-volume alternative BFRs: 1,2-bis(2,4,6-tribromophenoxy) ethane (BTPBE), bis(2-ethylhexyl)-2,3,4,5-tetrabromophthalate (TBPH), or 2-ethylhexyl-2,3,4,5-tetrabromobenzoate (EHTBB). Hatchling kestrels exhibited shifts in the expression of genes related to oxidative stress ( CYP, GSTA, SOD, and GPX1 ), thyroid hormone metabolism and transport ( DIO1, DIO2 , and TTR ), lipid and protein metabolism (PPAR, HMGCR, FAB1, and LPL), and cytokine-mediated inflammation ( TLR3, IL18, IRF7, STAT3, RACK1, and CEBPB ). Male and female hatchlings differed in which genes were differentially expressed, as well as the direction of the effect (up- vs. downregulation). These results build upon our previous findings of increased oxidative stress and disrupted thyroid signaling pathway in the same hatchlings. Furthermore, our results indicate that inflammatory responses appear to occur in female hatchlings exposed to BTBPE and EHTBB in ovo. Gene expression analysis revealed multiple affected pathways, adding to the growing evidence that sublethal physiological effects are complex and are a concern for birds exposed to BTBPE, EHTBB, or TBPH in ovo.

Biology

Methane oxidation and molecular characterization of methanotrophs from a former mercury mine impoundment

The Herman Pit, once a mercury mine, is an impoundment located in an active geothermal area. Its acidic waters are permeated by hundreds of gas seeps. One seep was sampled and found to be composed of mostly CO 2 with some CH 4 present. The δ 13 CH 4 value suggested a complex origin for the methane: i.e. , a thermogenic component plus a biological methanogenic portion. The relatively 12 C-enriched CO 2 suggested a reworking of the ebullitive methane by methanotrophic bacteria. Therefore, we tested bottom sediments for their ability to consume methane by conducting aerobic incubations of slurried materials. Methane was removed from the headspace of live slurries, and subsequent additions of methane resulted in faster removal rates. This activity could be transferred to an artificial, acidic medium, indicating the presence of acidophilic or acid-tolerant methanotrophs, the latter reinforced by the observation of maximum activity at pH = 4.5 with incubated slurries. A successful extraction of sterol and hopanoid lipids characteristic of methanotrophs was achieved, and their abundances greatly increased with increased sediment methane consumption. DNA extracted from methane-oxidizing enrichment cultures was amplified and sequenced for pmoA genes that aligned with methanotrophic members of the Gammaproteobacteria . An enrichment culture was established that grew in an acidic (pH 4.5) medium via methane oxidation.

California

Costimulatory receptors in a teleost fish: Typical CD28, elusive CTLA4

T cell activation requires both specific recognition of the peptide-MHC complex by the TCR and additional signals delivered by costimulatory receptors. We have identified rainbow trout sequences similar to CD28 (rbtCD28) and CTLA4 (rbtCTLA4). rbtCD28 and rbtCTLA4 are composed of an extracellular Ig-superfamily V domain, a transmembrane region, and a cytoplasmic tail. The presence of a conserved ligand binding site within the V domain of both molecules suggests that these receptors likely recognize the fish homologues of the B7 family. The mRNA expression pattern of rbtCD28 and rbtCTLA4 in naive trout is reminiscent to that reported in humans and mice, because rbtCTLA4 expression within trout leukocytes was quickly up-regulated following PHA stimulation and virus infection. The cytoplasmic tail of rbtCD28 possesses a typical motif that is conserved in mammalian costimulatory receptors for signaling purposes. A chimeric receptor made of the extracellular domain of human CD28 fused to the cytoplasmic tail of rbtCD28 promoted TCR-induced IL-2 production in a human T cell line, indicating that rbtCD28 is indeed a positive costimulator. The cytoplasmic tail of rbtCTLA4 lacked obvious signaling motifs and accordingly failed to signal when fused to the huCD28 extracellular domain. Interestingly, rbtCTLA4 and rbtCD28 are not positioned on the same chromosome and thus do not belong to a unique costimulatory cluster as in mammals. Finally, our results raise questions about the origin and evolution of positive and negative costimulation in vertebrate immune systems. T cell activation is initiated through complex cell-to-cell interactions. TCRs expressed on the surface of T cells first recognize antigenic peptides presented by MHC molecules on the surface of APCs. TCRs and other surface receptors and ligands stabilize the contact between T cells and APCs, which triggers signal transduction pathways resulting in T cell activation. According to the two-signal model ( 1 , 2 ), T cell activation by Ag requires both specific recognition of the peptide by the TCR (signal 1) and additional signals delivered by other costimulatory receptors (signal 2). Among the known costimulatory receptors, CD28 and CTLA4 (also known as CD152), which are expressed on T cells and bind their corresponding ligands B7-1/B7-2 (CD80/CD86) on APCs, represent a well-studied system in mammals ( 3 ). CD28 is a glycosylated homodimeric protein expressed on the surface of double-positive thymocytes, mature CD4 + T cells, CD11b − CD8 + T cells, and γδ CD3 + T cells ( 4 , 5 ). CD28 is expressed at higher levels on activated T cells than on resting cells ( 6 ). In mammals, CD28 binds to B7-1 and B7-2, which are expressed on the surface of APCs, and delivers a critical costimulatory signal to T lymphocytes. In the absence of CD28 ligation, TCR binding either induces apoptosis or anergy in T cells ( 5 ). Engagement of CD28 alone cannot activate T cells, even if synergetic effects are provided via stimulation by T cell mitogens or anti-CD3 treatment ( 7 ). A tyrosine-based motif in cytoplasmic tail of CD28 functions as a binding site for the p85 PI3K subunit when it is phosphorylated ( 8 , 9 ). Other CD28 intracytoplasmic motifs, which associates with IL-2-inducible tyrosine kinase, lymphocyte-specific tyrosine kinase, and the adaptor growth-factor receptor bound protein-2 are responsible for signal transduction ( 10 , 11 , 12 ). The binding of growth-factor receptor bound protein-2 to CD28 also activates the GTPase RAS ( 13 ). CD28 signaling is also thought to contribute to the mobilization of lipid rafts to the immunological synapse ( 14 ), the region of contact between T cell and APC, which lowers the overall threshold of TCR engagement required for effective cytokine production and proliferation ( 15 ). In contrast, CTLA4 is a powerful negative regulator of T cell activation and was first cloned via differential screening of a cytotoxic T cell cDNA library ( 16 ). CD28 and CTLA4 belong to the same family and share high sequence similarity to each other ( 16 , 17 ). Both receptors interact with B7-1 and/or B7-2 but induce different signals: CD28 amplifies signaling triggered by the TCR-CD3 complex, whereas CTLA4 generates negative signals that inhibit T cell activation ( 18 ). CTLA4 has higher affinity for B7-1 and B7-2 compared with CD28, and its expression is also induced by TCR engagement ( 19 ). The mechanisms of CTLA4-mediated suppression likely involve both competition with CD28 for B7-1/B7-2 binding and potent inhibitory signals delivered by CTLA4 ( 20 ). The inhibitory signaling mechanisms triggered by CTLA4 are not clear. The CTLA4 cytoplasmic tail lacks typical ITIM motifs and shares with CD28 a p85 binding site ( 21 ). Thus, the extent of an immune response is likely controlled through the finely tuned expression of costimulatory receptors from the CD28/CTLA4 family on the surface of activated T cells ( 22 , 23 ). Very little is known about T cell responses and activation in bony fish. TCR-αβ cDNAs ( 24 , 25 , 26 , 27 ) and polymorphic class IA and class IIA/B MHC molecules ( 28 , 29 , 30 ) have been reported in several species, suggesting that the fish TCR recognizes antigenic peptides presented by MHC molecules similar to that of mammals. T cell-mediated responses in fish are supported by several lines of evidence. Allograft rejection provided the first experimental indications suggesting that bony fish possess a functional T cell-mediated immune response ( 31 , 32 ). In vitro assays for allospecific cytotoxicity have also been established using clonal and nonclonal catfish cell lines ( 33 , 34 ) or clonal rainbow trout ( 35 ). Autologous cell-mediated specific lysis of virus-infected syngenic target cells has also been reported in cloned goldfish ( 36 , 37 ). Finally, both public and private T cell-specific expansions have been observed in rainbow trout during secondary immune responses to viral hemorrhagic septicemia virus (VHSV), 3 a fish rhabdovirus, using TCR-β CDR3-length spectratyping ( 38 ). TCR-MHC-peptide interactions induce signaling events through CD3 in mammals and most likely in lower vertebrates because a complete set of CD3 genes, including TCR ζ, CD3 ε, and CD3 γδ, has been found in Pufferfish and Xenopus ( 39 , 40 ). CD8α has been identified in rainbow trout ( 41 ); however, the cytoplasmic tail lacks the consensus p56 lck motif, suggesting that TCR/CD3/CD8-mediated signaling events may be different in teleosts. In this study, we have identified and initially characterized two members of the CD28 family in rainbow trout, rbtCD28 and rbtCTLA4. Their sequence features and expression patterns suggest that they are the likely homologues of mammalian CD28 and CTLA4. The potential costimulatory capacities of these fish receptors were investigated using a human T cell line expressing chimeric receptors composed of the extracellular domain of human CD28 (hCD28) fused to the cytoplasmic tail of rbtCD28 or rbtCTLA4. The chimeric hCD28-rbtCD28 receptor mediated enhanced TCR-induced IL-2 production, suggesting a costimulatory function for rbtCD28. In contrast, the divergent cytoplasmic tail from rbtCTLA4 did not mediate similar signaling activities. This study therefore provides the first characterization of costimulatory receptors in lower vertebrates.

Journal of Immunology

Rearing performance of juvenile brown trout Salmo trutta fed a bioprocessed soybean meal diet with differing velocity regimes

This 121-day experiment evaluated the rearing performance of brown trout Salmo trutta fed one of two isonitrogenous and isocaloric diets (46% protein, 16% lipid) and reared at velocities of either 2.8 or 16.1 cm/s. Fishmeal was the primary protein source for the reference diet, which was compared to a bioprocessed soybean meal ingredient that replaced approximately 67% of the fishmeal in the experimental diet. At the end of the experiment, there were no significant differences in gain, percent gain, feed conversion rates, nor specific growth rates between the dietary treatments. There were also no significant differences in intestinal morphology, splenosomatic, hepatosomatic, and viscerosomatic indices related to diet composition. However, gain, percent gain, feed fed, and specific growth rate were all significantly greater in brown trout reared at the higher velocity. No significant differences in any of the other variables measured were observed between the velocity treatments. There were no significant interactions between diet and velocity in any of the variables. Based on the results of this study, bioprocessed soybean meal can replace at least 67% of the fish meal in brown trout diets, regardless of the rearing velocities used in this study. Higher rearing velocities are recommended to maximize juvenile brown trout growth rates.

Open Journal of Animal Sciences

Molecular and isotopic tracers used to examine sources of organic matter and its incorporation into the food webs of San Francisco Bay

Multiple indicators (Chl a , C : N ratios, [ δ 13 C]POC, and two classes of lipid biomarker compounds- sterols and phospholipid ester-linked fatty acids) were used to evaluate spatial and temporal variations in the origin of particulate organic matter (POM) in the San Francisco Bay (SFB) estuary. Comparisons were made between the northern and southern subestuaries of SFB, as well as along the salinity gradient of northern SFB. Two sample types were collected-seston, which was used to characterize the bulk POM, and tissues of the suspension-feeding bivalve Potamocorbula amurensis -in order to evaluate the assimilable portion of the POM. Samples were collected around biological and physical events (phytoplankton blooms and freshwater inflow) thought to be the primary mechanisms controlling temporal variability in organic matter sources. Seston samples indicate that phytoplankton sources of POM are important throughout the entire SFB system, with additional inputs of organic matter from bacterial and terrestrial vascular plant sources delivered to the northern region. Analysis of biomarker compounds in P. amurensis tissues indicates that phytoplankton supply a large fraction of the assimilable carbon to clams throughout SFB, although isotopic analysis of clam tissues suggests that the origin of this reactive carbon varies spatially and that freshwater algae are an important source of reactive organic matter to clams living in northern SFB.

California

Correcting a systematic bias in an ocean drilling project site 882 alkenone sea surface temperature record

Reconstructions of sea surface temperature (SST) in the geologic record are fundamental to our understanding of Earth's climate history and the evaluation of Earth's climate sensitivity to greenhouse gas forcing. SSTs are reconstructed with a variety of methods, including alkenone biomarker lipids produced by certain coccolithophore algae. One such alkenone SST reconstruction from the subpolar northwest Pacific Ocean Drilling Program (ODP) Site 882 (50.21° N, 167.35° E, 3244 m water depth) has played a large role in shaping the paleoclimate science community's view of global climate warmth during the Late Pliocene (3.6–2.6 million years ago) and the subsequent cooling that characterized the intensification of Northern Hemisphere Glaciation (Haug, 1995; Haug et al., 2005; Martínez-Garcia et al., 2010). First, we have found that the values reported in the PANGAEA archive for this ODP Site 882 alkenone dataset were inaccurately reported as U K' 37 values when they are instead U K 37 ( https://doi.org/10.1594/PANGAEA.315092 , Haug and Sarnthein, 2005). This error in the archived data table resulted in the incorporation of inaccurate absolute SST estimates by several studies that applied U K' 37 calibrations to this ODP Site 882 dataset (e.g., Brennan et al., 2022; Clark et al., 2024, 2025; Tierney et al., 2019, 2025b). Second, using other published data from ODP Site 882 (Studer et al., 2012) and nearby Site 883 (51.11° N, 167.46° E, 2384 m water depth; Herbert et al., 2016; Novak et al., 2024), we show that the original Haug (1995) alkenone SST record at ODP Site 882 systematically reports an amplified range of absolute SST values compared to the more recently generated data. This observation is consistent with the known concentration-dependent biases of the gas chromatography chemical ionization mass spectrometry (GC-CI-MS) analytical method used by the original ODP Site 882 study (Chaler et al., 2000, 2003; Haug, 1995; Hefter, 2008; Rosell-Mele et al., 1995). These concentration-dependent analytical biases complicate applying a uniform correction to the entire Haug (1995) dataset. However, we are able to leverage the published datasets to propose a correction and quantification of uncertainty for a subset of the Haug (1995) dataset measured at similar on-column analyte abundance. For these samples, we find an average analytical uncertainty equivalent to ±2.05 °C , which is greater than and in addition to the typical ±1.4 °C 1 σ prediction uncertainty of the U K' 37 sea surface temperature proxy. We then discuss the implications of the corrected dataset for our understanding of late Neogene and Quaternary climate in the Kuroshio Extension region.

Climate of the Past

A Lake Charr pangenome reveals highly conserved Ohnologs as drivers of phenotypic diversity

Whole-genome duplication (WGD) is hypothesized to spur evolutionary diversification by producing genome-wide duplicate gene sets (Ohnologs) that are initially functionally redundant but can diverge markedly as the effects of relaxed selection accumulate over time. However, the underlying mechanisms remain unclear, in part because genomic studies often reconstruct Ohnolog evolution over millions of years, during which subsequent mutations can obscure deep-time signals. Investigating the relationship between Ohnolog evolution and diversification on a contemporary timescale offers clearer insights. We explore this relationship in Lake Charr ( Salvelinus namaycush ), where ∼10% of genes are retained highly conserved polyploid duplicates following the Salmonid-Specific Fourth Round WGD. Using 31 chromosome-level assemblies of Lake Charr from morphologically and ecologically diverse populations, joined into a pangenome graph, we characterized 189,555 structural variants (SVs) that were significantly less likely to affect genes retained as sequence-conserved Ohnolog pairs, nuancing the hypothesis that gene redundancy, relaxed selection, and functional diversification are intertwined. However, we found that SVs affecting such conserved Ohnologs may be potent drivers of adaptive evolution. Notably, we identified a putative 938-Kb interchromosomal translocation containing 25 genes with highly conserved Ohnologs in a paralogous (but untranslocated) genomic block. This putative translocation appears to have facilitated Ohnolog divergence in ankrd11 and hp , genes putatively linked to craniofacial and lipid metabolic diversity in sympatric Lake Superior morphs. This research reveals that conserved Ohnologs previously presumed to be redundant remain a reservoir for adaptive change.

BioRxiv

Positively selected genes in the hoary bat (Lasiurus cinereus) lineage: Prominence of thymus expression, immune and metabolic function, and regions of ancient synteny

Background Bats of the genus Lasiurus occur throughout the Americas and have diversified into at least 20 species among three subgenera. The hoary bat ( Lasiurus cinereus ) is highly migratory and ranges farther across North America than any other wild mammal. Despite the ecological importance of this species as a major insect predator, and the particular susceptibility of lasiurine bats to wind turbine strikes, our understanding of hoary bat ecology, physiology, and behavior remains poor. Methods To better understand adaptive evolution in this lineage, we used whole-genome sequencing to identify protein-coding sequence and explore signatures of positive selection. Gene models were predicted with Maker and compared to seven well-annotated and phylogenetically representative species. Evolutionary rate analysis was performed with PAML. Results Of 9,447 single-copy orthologous groups that met evaluation criteria, 150 genes had a significant excess of nonsynonymous substitutions along the L. cinereus branch ( P < 0.001 after manual review of alignments). Selected genes as a group had biased expression, most strongly in thymus tissue. We identified 23 selected genes with reported immune functions as well as a divergent paralog of Steep1 within suborder Yangochiroptera. Seventeen genes had roles in lipid and glucose metabolic pathways, partially overlapping with 15 mitochondrion-associated genes; these adaptations may reflect the metabolic challenges of hibernation, long-distance migration, and seasonal variation in prey abundance. The genomic distribution of positively selected genes differed significantly from background expectation by discrete Kolmogorov–Smirnov test ( P < 0.001). Remarkably, the top three physical clusters all coincided with islands of conserved synteny predating Mammalia, the largest of which shares synteny with the human cat-eye critical region (CECR) on 22q11. This observation coupled with the expansion of a novel Tbx1 -like gene family may indicate evolutionary innovation during pharyngeal arch development: both the CECR and Tbx1 cause dosage-dependent congenital abnormalities in thymus, heart, and head, and craniodysmorphy is associated with human orthologs of other positively selected genes as well.

PeerJ

Trace elements, organochlorines, polycyclic aromatic hydrocarbons, dioxins, and furans in lesser scaup wintering on the Indiana Harbor Canal

During the winter of 1993a??94, male lesser scaup (Aythya affinis) were collected on the heavily polluted Indiana Harbor Canal (IHC), East Chicago, IN, USA, and examined for tissue contaminant levels. Lesser scaup collected on the IHC had higher concentrations of cadmium (Cd), mercury (Hg), selenium (Se), polychlorinated biphenyls (PCBs), selected organchlorine pesticides, polychlorinated dibenzodioxins, polychlorinated dibenzofurans, polycyclic aromatic hydrocarbons, and aliphatic hydrocarbons than reference birds. Of the scaup collected on the IHC, 44% had Cd concentrations in the liver considered above background for freshwater waterfowl (>3 I?g/g dry wt.), 50% had Se concentrations in the liver above a level possibly harmful to the health of young and adult birds (>33 I?g/g dry wt.), and 88% of the scaup carcasses exceeded the PCB human consumption guidelines for edible poultry in the USA (>3.0 I?g/g lipid wt.). The ratio of pristane:n-heptadecane concentrations in 47% of lesser scaup collected on IHC was elevated above 1.0, which is indicative of chronic exposure to petroleum hydrocarbons. Copyright A? 2009 Elsevier B.V.

Environmental Pollution

Tissue residues of dieldrin in relation to mortality in birds and mammals

An experiment was performed with Coturnix to learn what residue levels were indicative of death from dieldrin poisoning. Birds were fed diets containing 250, 50, 10, and 2 ppm dieldrin for periods up to 158 days. The dieldrin was 95% pure HEOD, which is 1,2,3,4,10,10-hexachloro-6, 7.epoxy. l,4,4a,5,6,7,8,8a-octahydro-l,4-endo,exo-5,8- dimethanonaphthalene. When half of a group was dead, the other half was sacrificed for comparison of residues in dead and survivors. Dosage levels controlled time to death, but did not control residue levels in the dead. Residues in liver and carcass proved to be misleading and complicated by changes in lipid content. Brain residues correlated well with death although residues in dead and survivors overlapped. Brain residues of animals killed by dieldrin in the field and in other experiments are listed. Data agree in general for several species of birds and mammals. There is evidence, however, for species differences in average lethal brain residues. It is concluded that brain residues of 4 or 5 ppm (wet weight) or higher indicate that the animal was in the known danger zone and may have died from dieldrin. Brain residues averaged lower in wild than in experimental animals. Possible explanations include species differences, more stress and exertion in the wild, and overrepresentation in the field series of individuals that will die with low but lethal brain residues. The latter is supported by the fact that the first Coturnix to die in each sex and treatment group had the lowest brain residue of its group. Birds receiving 2 ppm dieldrin, and some receiving 10 ppm, were able to maintain low brain residues throughout the experiment. However, birds of the 10 ppm group could withstand little stress and mobilization of toxicant, for a few micrograms in the brain were lethal and bodies contained hundreds or thousands of micrograms.

Book chapter

Effects of pesticides on Canada Geese

This paper summarizes published and unpublished sources relating to exposure of Canada geese (Branta canadensis) to pesticides, emphasizing documented episodes of poisoning by organochlorine (OC), organophosphorus (OP), and carbamate compounds. Canada geese accumulate the lipid-soluble OC compounds, although they have a lower potential for biomagnification of these pesticides than animals at higher trophic levels in food webs. Low residues of p,p'-DDT and its metabolite p,p'-DDE were frequently found in tissues and eggs of Canada geese, but they had no apparent adverse effects on reproductive success or eggshell thickness. Likewise, in an orchard system in central Washington state, the OC rodenticide endrin accumulated in tissues and eggs of Canada geese without apparent adverse effect. In contrast, ingestion of seeds treated with the OC heptachlor caused mortality, lowered reproductive success, and caused a local population decline of geese in Oregon and Washington. In recent years, the most persistent OC's have been banned by law and replaced with less persistent carbamate and OP compounds that do not readily accumulate in animal tissues. However, many of these compounds are acutely toxic and have caused numerous die-offs of Canada geese. Among OP compounds, diazinon was responsible for most reported die-offs (41 incidents involving >535 geese), whereas parathion applied alone or jointly with methyl parathion accounted for most reported mortalities (8 incidents involving >3,000 geese). Three other OP's, a carbamate (carbofuran), zinc phosphide, and strychnine also caused goose die-offs. Mortality from anticholinesterase (antiChE) compounds occurs relatively soon after exposure and death can usually be diagnosed by evaluation of brain cholinesterase (thE) activity. Because geese are primarily grazers, the main route of exposure to antiChE's is apparently ingestion of contaminated grasses and forbs; dermal absorption and inhalation are other routes. Despite the widespread die-offs of Canada geese from antiChE insecticides, there is no evidence of adverse effects on population levels. It is not known how sublethal antiChE exposure relates to long-term survival and reproductive success of birds.

Book chapter

Sources, fate, and effects of PAHs in shallow water environments: a review with special reference to small watercraft

Polycyclic aromatic hydrocarbons (PAHs) are aromatic hydrocarbons with two to seven fused carbon (benzene) rings that can have substituted groups attached. Shallow coastal, estuarine, lake, and river environments receive PAHs from treated wastewater, stormwater runoff, petroleum spills and natural seeps, recreational and commercial boats, natural fires, volcanoes, and atmospheric deposition of combustion products. Abiotic degradation of PAHs is caused by photooxidation, photolysis in water, and chemical oxidation. Many aquatic microbes, plants, and animals can metabolize and excrete ingested PAHs; accumulation is associated with poor metabolic capabilities, high lipid content, and activity patterns or distributions that coincide with high concentrations of PAHs. Resistance to biological transformation increases with increasing number of carbon rings. Four- to seven-ring PAHs are the most difficult to metabolize and the most likely to accumulate in sediments. Disturbance by boating activity of sediments, shorelines, and the surface microlayer of water causes water column re-entry of recently deposited or concentrated PAHs. Residence time for PAHs in undisturbed sediment exceeds several decades. Toxicity of PAHs causes lethal and sublethal effects in plants and animals, whereas some substituted PAHs and metabolites of some PAHs cause mutations, developmental malformations, tumors, and cancer. Environmental concentrations of PAHs in water are usually several orders of magnitude below levels that are acutely toxic, but concentrations can be much higher in sediment. The best evidence for a link between environmental PAHs and induction of cancerous neoplasms is for demersal fish in areas with high concentrations of PAHs in the sediment.

Book chapter

Chlorinated hydrocarbon and mercury residues in woodcock in the United States, 1970-71

During Late 1970 and early 1971, 229 woodcock (Philohela minor) were collected from 23 Eastern and Midwestern States. Analyses for chlorinated hydrocarbons and mercury in these migratory birds showed generally low levels which are not considered dangerous to human consumers. In this survey, Louisiana woodcock had lower residues of heptachlor epoxide and DDE than those tested in a 1965 survey. PCB levels, however, may have increased. Mirex levels were greatest in Mississipi and Louisiana woodcock. Pooling of birds and averaging of individually analyzed birds did not provide equivalent estimates of equivalent residues; pool values tended to be larger and more variable. Levels of six chlorinated hydrocarbons and mercury were negatively correlated with the latitude of the collection site. However, this relationship seemed weakest for PCB's. Among eight chemical residues, PCB levels were most often correlated with levels of the other seven. Levels of chlorinated hydrocarbons in wings were correlated with levels in breast muscle and in carcass; however, mean levels of certain residues differed significantly among wing, muscle, and carcass even when compared on a lipid basis.

Pesticides Monitoring Journal

Organochlorine residues in woodcock wings, 11 states--1970-71

A survey of organochlorine residues in woodcock wings was undertaken to determine whether these wings are suitable for showing regional differences in residues and to obtain a baseline in 1970-71 for later comparisons. Woodcock wings were obtained from the annual hunter's wing survey. Samples came from eight States (Louisiana, Maine, Michigan, New Hampshire, New Jersey, New York, Pennsylvania, and Wisconsin) and one tri-State area (North Carolina, South Carolina, and Georgia). Wings from the tri-State area contained significantly higher (P<0.01) concentrations of DDT (including DDT, DDD, and DDE) than those from other States. Concentrations of polychlorinated biphenyls (PCB's) also were significantly higher (P<0.05) in samples from these three States. Wings from Louisiana and the tri-State area had significantly higher (P<0.01) concentrations of dieldrin than wings from the other States, and those from Louisiana had significantly higher (P < 0.01) concentrations of mirex than those from other States. (Residues are on lipid base) The compounds detected and the ranges of residue means for all sampling areas were as follows: Total DDT (5.89--65.15 ppm); DDT (0.34 m--14.93 ppm); DDE (4.66--47.47 ppm); DDD (0.11--3.44 ppm); mirex (0.76--16.93 ppm); dieldrin (0.09--3.06 ppm); and PCB's (4.27--8.63 ppm). Woodcock wings appear to be suitable for determining regional differences in organochlorine residues in this species.

Pesticides Monitoring Journal