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2016 Lake Michigan Lake Trout Working Group Report

This report provides a review on the progression of lake trout rehabilitation towards meeting the Salmonine Fish Community Objectives (FCOs) for Lake Michigan (Eshenroder et. al. 1995) and the interim goal and evaluation objectives articulated in A Fisheries Management Implementation Strategy for the Rehabilitation of Lake Trout in Lake Michigan (Dexter et al. 2011); we also include data describing lake trout stocking and mortality to portray the present state of progress towards lake trout rehabilitation.

Report↗

Lateral and vertical channel movement and potential for bed-material movement on the Madison River downstream from Earthquake Lake, Montana

The 1959 Hebgen Lake earthquake caused a massive landslide (Madison Slide) that dammed the Madison River and formed Earthquake Lake. The U.S. Army Corps of Engineers excavated a spillway through the Madison Slide to permit outflow from Earthquake Lake. In June 1970, high streamflows on the Madison River severely eroded the spillway channel and damaged the roadway embankment along U.S. Highway 287 downstream from the Madison Slide. Investigations undertaken following the 1970 flood events concluded that substantial erosion through and downstream from the spillway could be expected for streamflows greater than 3,500 cubic feet per second (ft 3 /s). Accordingly, the owners of Hebgen Dam, upstream from Earthquake Lake, have tried to manage releases from Hebgen Lake to prevent streamflows from exceeding 3,500 ft 3 /s measured at the U.S. Geological Survey (USGS) gaging station 0638800 Madison River at Kirby Ranch, near Cameron, Montana. Management of flow releases from Hebgen Lake to avoid exceeding the threshold streamflow at USGS gaging station 06038800 is difficult, and has been questioned for two reasons. First, no road damage was reported downstream from the Earthquake Lake outlet in 1993, 1996, and 1997 when streamflows exceeded the 3,500-ft 3 /s threshold. Second, the 3,500-ft 3 /s threshold generally precludes releases of higher flows that could be beneficial to the blue-ribbon trout fishery downstream in the Madison River. In response to concerns about minimizing streamflow downstream from Earthquake Lake and the possible armoring of the spillway, the USGS, in cooperation with the Madison River Fisheries Technical Advisory Committee (MADTAC; Bureau of Land Management; Montana Department of Environmental Quality; Montana Fish, Wildlife and Parks; PPL-Montana; U.S. Department of Agriculture Forest Service - Gallatin National Forest; and U.S. Fish and Wildlife Service), conducted a study to determine movement of the Madison River channel downstream from Earthquake Lake and to investigate the potential for bed material movement along the same reach. The purpose of this report is to present information about the lateral and vertical movement of the Madison River from 1970 to 2006 for a 1-mile reach downstream from Earthquake Lake and for Raynolds Pass Bridge, and to provide an analysis of the potential for bed-material movement so that MADTAC can evaluate the applicability of the previously determined threshold streamflow for initiation of damaging erosion. As part of this study channel cross sections originally surveyed by the USGS in 1971 were resurveyed in 2006. Incremental channel-movement distances were determined by comparing the stream centerlines from 14 aerial photographs taken between 1970 and 2006. Depths of channel incision and aggregation were determined by comparing the 2006 and 1971 cross-section and water-surface data. Particle sizes of bed and bank materials were measured in 2006 and 2008 using the pebble-count method and sieve analyses. A one-dimensional hydraulic-flow model (HEC-RAS) was used to calculate mean boundary-shear stresses for various streamflows; these calculated boundary-shear stresses were compared to calculated critical-shear stresses for the bed materials to determine the potential for bed-material movement. A comparison of lateral channel movement distances with annual peak streamflows shows that streamflows higher than the 3,500-ft 3 /s threshold were followed by lateral channel movement except from 1991 to 1992 and possibly from 1996 to 1997. However, it was not possible to discern whether the channel moved gradually or suddenly, or in response to one peak flow, to several peak flows, or to sustained flows. The channel moved between 2002 and 2005 even when streamflows were less than the threshold streamflow of 3,500 ft 3 /s. Comparisons of cross sections and aerial photographs show that the channel has moved laterally and incised and aggraded to varying degrees. The channel has developed meander bends and has incised as much as 5–12 feet (ft) through the upstream part of the Madison Slide (cross sections 1400–800). Near cross section 800, the stream has eroded into the steep right bank between the stream and the road where fill was mechanically placed after 1970. Channel movement also was noted downstream from the Madison Slide. Near Raynolds Pass Bridge, about 3 miles (mi) downstream from Earthquake Lake, elevations across the channel have changed by -1.4 ft to +1.9 ft, but these changes were local in nature and could represent a few rocks or depressions in the bed. Overall, it does not appear that the materials eroded from the Madison Slide are causing aggradation in the subreach near the Raynolds Pass Bridge. Comparisons of critical shear stresses to mean boundary-shear stresses indicate that the D50 particle sizes (median size) along the right side of the bed between cross sections 400 and 500 and along the right side of the bed between cross sections 1300 and 1400 could move at the threshold streamflow. In contrast, most of the D84 particle sizes at those two locations probably will not move at the threshold streamflow. This lack of movement for the larger particles at the threshold streamflow could lead to further armoring of the bed as the D50 and smaller-sized particles are removed from the bed and transported downstream. The Shields parameter values from 0.04 to 0.08 that were used to calculate critical shear stresses could be conservative for a high-gradient stream such as the Madison. A higher, less conservative, Shields parameter would result in higher critical shear stresses, meaning that higher streamflows would be required to move material than those reported herein. In addition, because materials in the channel thalweg are exposed to higher boundary-shear stresses than the materials along the sides of the channel, larger, more erosion-resistant materials likely exist in the deeper parts of the channel where high-flow depths and velocities prevented sediment sampling. Movement of these materials might require higher critical shear stresses than estimated in this report. Characterization of sediment sizes in the center of the stream and observation of bed-material movement for a range of streamflows could provide information to help refine the Shields parameter and critical-shear stress estimates for bed materials in the Madison River downstream from Earthquake Lake. Furthermore, resurveying cross sections and water-surface elevations more frequently (either annually or after high streamflows) could better define the relation between streamflow and lateral and vertical channel movement.

Montana↗

Daytime distribution of Pontoporeia affinis off bottom in Lake Michigan

The vertical migration of the amphipod Pontoporeia affinis in Lake Michigan has been well documented by Wells, Marzolf, and McNaught and Hasler. Wells and Marzolf observed Pontoporeia off bottom only at night. McNaught and Hasler, however, found Pontoporeia above the bottom shortly after noon in a 24-hr study on 12 June 1965, and some individuals were taken just below the thermocline in all daylight hours in a similar study on 19-20 August. This paper presents evidence that Pontoporeia regularly were present above bottom during the day from April-August 1964. The data for this report were collected during a study of seasonal and depth distribution of larval bloaters (Coregonus hoyi) in Lake Michigan. Sampling was conducted from the U.S. Bureau of Commercial Fisheries RV Cisco off Saugatuck, Michigan, at intervals of about 10 days from 9 April to 14 August 1964. A few samples were taken on 22 August and 15 October.

Limnology and Oceanography↗

Angler satisfaction in South Dakota

Many industries use satisfaction measures to evaluate performance. The South Dakota Department of Game, Fish and Parks identified satisfaction as one of their performance measures for evaluating fishing in South Dakota. In fisheries management, the perspectives’ of license buyers are valuable to determine if management activities are providing the benefits anticipated by biologists. Surveys of South Dakota anglers are conducted to better understand licensees in order to promote satisfying angling experiences. Internet surveys were distributed to all license buyers providing email addresses in 2011 and 2012. Angler satisfaction was analyzed by angler type (demographics and fishing characteristics) to further clarify performance measures. Most anglers (> 70%) were satisfied with their angling experiences. Nonresidents expressed higher levels of satisfaction with fishing in South Dakota in 2011 and 2012 than residents. Anglers’ rating of fishing quality was more strongly correlated with satisfaction than their reported number of fish harvested, which suggests that strategies to influence angler perceptions and expectations can also be employed to influence satisfaction (in addition to techniques influencing fish populations). This research further integrates sociological data into South Dakota fisheries management processes.

South Dakota↗

Effects of a 2006 High-Flow Release from Tiber Dam on Channel Morphology at Selected Sites on the Marias River, Montana

In June 2006, an opportunistic high-flow release was made from Tiber Dam on the Marias River in Mont., to investigate possible alternatives for partially restoring the river's natural flow pattern and variability. At two sites along the river, we measured channel geometry before and after the high-flow release to evaluate channel change and alteration of physical habitat. Streamflow downstream from Tiber Dam has been stabilized by reduction of high flows and augmentation of low flows. This has produced flood-control benefits as well as some possible adverse environmental effects downstream from the dam. The 2006 high-flow release resulted in a downstream hydrograph with high flows of above-average magnitude in the post-dam flow regime of the Marias River. Timing of the peak and the declining limb of the release hydrograph were very similar to a historical, unregulated hydrograph of the Marias River. Furthermore, the high flow produced many of the qualitative elements of ecologically important physical processes that can be diminished or lost due to flow stabilization downstream from a dam. Typically dry back channels were occupied by flowing water. Islands were inundated, resulting in vegetation removal and sediment accretion that produced new disturbance patches of bare, moist substrate. Cut banks were eroded, and large woody debris was added to the river and redistributed. Flood-plain surfaces were inundated, producing substantial increases in wetted perimeter and spatially distinctive patterns of deposition associated with natural levee formation. The scale of the 2006 high flow - in terms of peak magnitude and the lateral extent of bottomland influenced by inundation or lateral channel movement - was roughly an order of magnitude smaller than the scale of an infrequent high flow in the pre-dam regime. Overall extent and composition of riparian vegetation will continue to change under a scaled-down, post-dam flow regime. For example, the importance of the non-native Russian-olive (Elaeagnus angustifolia) will likely increase. Reestablishing a more natural pattern of flows, however, should promote the increase of native cottonwood and willow (Salix spp.) in the new-albeit smaller-post-dam riparian ecosystem. A more natural flow regime will also likely provide improved habitat for native fish in the Marias River. Response of fish communities to such flows is the subject of current fisheries studies being conducted in cooperation with Bureau of Reclamation.

Open-File Report↗

Trends in fishery management of the Great Lakes

Some hope is returning for recovery of the fish stocks of the Great Lakes, which have been outstanding examples of abuse although they are the world's largest and most valuable freshwater fishery resource. The lakes and the fish in them have been under complete jurisdiction of sovereign nations and their subdivisions almost since the settlement of north-central North America, but ironically this control has not prevented their decadence. For the first time in the long history of the Great Lakes fishery, management measures have been taken to meliorate conditions that contributed to earlier difficulties.

Special Publication↗

Testing pop-up satellite tags as a tool for identifying critical habitat for Pacific halibut ( Hippoglossus stenolepis ) in the Gulf of Alaska

To maintain healthy commercial and sport fisheries for Pacific halibut ( Hippoglossus stenolepis ), critical habitat must be defined by determining life history patterns on a daily and seasonal basis. Pop-up satellite archival transmitting (PSAT) tags provide a fisheries-independent method of collecting environmental preference data (depth and ambient water temperature) as well as daily geolocation estimates based on ambient light conditions. In this study, 14 adult halibut (107-165 cm FL) were tagged and released with PSAT tags in and around Resurrection Bay, Alaska. Commercial fishermen recovered two tags, while five tags transmitted data to ARGOS satellites. Horizontal migration was not consistent among fish as three halibut remained in the vicinity of release while four traveled up to 358 km from the release site. Vertical migration was not consistent among fish and over time, but they spent most their time between 150-350 m. The minimum and maximum depths reached by any of the halibut were 2m and 502m, respectively. The fish preferred water temperatures of roughly 6 °C while experiencing ambient temperatures between 4.3 °C and 12.2 °C. Light attenuation with depth prevented existing geolocation software and light sensing hardware from accurately estimating geoposition, however, information from temperature, depth, ocean bathymetry, and pop-off locations provided inference on fish movement in the study area. PSAT tags were a viable tool for determining daily and seasonal behavior and identifying critical halibut habitat, which will aid fisheries managers in future decisions regarding commercial and sport fishing regulations.

Alaska↗

Environmental setting of benchmark streams in agricultural areas of eastern Wisconsin

This report describes the environmental setting of 20 benchmark streams in agricultural areas of eastern Wisconsin that are part of the Western Lake Michigan Drainages, National Water-Quality Assessment Program. Benchmark streams are defined as those that show minimal adverse effects from human activity, and they were selected on the basis of field reconnaissance and the following criteria: (1) available invertebrate or fisheries data that indicated good to excellent water quality, (2) instream habitat restoration for fisheries enhancement, and (3) land management to protect riparian vegetation. Information gathered from these benchmark sites can be used as a standard of reference to compare the health of other streams in agricultural areas on the basis of aquatic-biota communities, habitat, and water-quality characteristics. The information included in this report serves as background information that will be useful for a series of studies at these benchmark-stream sites in the Western Lake Michigan Drainages study unit as part of the National Water-Quality Assessment Program. Four relatively homogeneous units (RHU's) in agricultural areas that differed in bedrock and surficial geology were selected for study. RHU 1 (clayey surficial deposits over carbonate bedrock) and RHU 3 (sandy-till surficial deposits over carbonate bedrock) are in adjacent agricultural areas in the Southeastern Wisconsin Till Plains ecoregion. RHU 20 (sandy/sand and gravel surficial deposits over igneous and metamorphic bedrock) and RHU 26 (sandy/sand and gravel surficial deposits over sandstone bedrock) are in adjacent areas of agriculture and mixed forests in the North Central Hardwood Forests ecoregion. Differences in land use/land cover, and riparian vegetation and instream habitat characteristics are presented. Summaries of field measurements of water temperature, pH, specific conductance and concentrations of dissolved oxygen, total organic plus ammonia nitrogen, dissolved ammonium, nitrate plus nitrte as nitrogen, total phosphorus, dissolved orthophosphate, and atrazine are listed. Concentrations of dissolved oxygen for the sampled streams ranged from 6 A to 14.3 and met the standards set by the Wisconsin Department of Natural Resources (WDNR) for supporting fish and aquatic life. Specific conductance ranged from 98 to 753 u,Scm with values highest in RHU's 1 and 3, where streams are underlain by carbonate bedrock. Median pH did not vary greatly among the four RHU's and ranged from 6.7 to 8.8 also meeting the WDNR standards. Concentrations of total organic plus ammonia nitrogen, dissolved ammonium, total phosphorus, and dissolved orthophosphate show little variation between streams and are generally low, compared to concentrations measured in agriculturally-affected streams in the same RHU's during the same sampling period. Concentrations of the most commonly used pesticide in the study unit, atrazine, were low in all streams, and most concentrations were below trn 0.1 u,g/L detection limit. Riparian vegetation for the benchmark streams were characterized by lowland species of the native plant communities described by John T. Curtis in the "Vegetation of Wisconsin." Based on the environmental setting and water-quality information collected to date, these streams appear to show minimal adverse effects from human activity.

Wisconsin↗

Tag return models allowing for harvest and catch and release: Evidence of environmental and management impacts on striped bass fishing and natural mortality rates

Catch-and-release fisheries have become very important in the management of overexploited recreational fish stocks. Tag return studies, where the tag is removed regardless of fish disposition, have been used to assess the effectiveness of restoration efforts for these fisheries. We extend the instantaneous rate formulation of tag return models to allow for catch and release as well as harvest. The key point of our methods is that, given an estimate of the tag reporting rate, the fishing mortality rate (F) is separated into two components: the mortality on harvested fish and the "mortality" on tags (because the lags are removed) of fish released alive. The total fishing mortality rate for untagged fish is the sum of the Fs due to harvest and hooking mortality suffered by fish released alive. Natural mortality rates can also be estimated. Both age-independent models and age-dependent models are constructed, and the age-dependent models are illustrated by application to data from a study of striped bass Morone saxatilis in Chesapeake Bay from 1991 to 2003 by the Maryland Department of Natural Resources. By fitting models of the natural mortality rate with limited age and year dependence, we demonstrate an overall decrease in natural mortality rates as fish age and provide evidence of an increase in natural mortality beginning in the late 1990s, when an outbreak of the disease mycobacteriosis is thought to have begun. Our results indicate that fishing mortality is age dependent; selectivity increases up to age 6, when fish appear to be fully recruited to the fishery. There is also evidence of an increase in fishing mortality since 1995, when regulations were relaxed. ?? Copyright by the American Fisheries Society 2007.

North American Journal of Fisheries Management↗

Nutrients, phytoplankton, zooplankton, and macrobenthos

Lower trophic levels support the prey fish on which most sport fish depend. Therefore, understanding the production potential of lower trophic levels is integral to the management of Lake Ontario’s fishery resources. Lower trophic-level productivity differs among offshore and nearshore waters. In the offshore, there is concern about the ability of the lake to support Alewife (Table 1) production due to a perceived decline in productivity of phytoplankton and zooplankton whereas, in the nearshore, there is a concern about excessive attached algal production (e.g., Cladophora) associated with higher nutrient concentrations—the oligotrophication of the offshore and the eutrophication of the nearshore (Mills et al. 2003; Holeck et al. 2008; Dove 2009; Koops et al. 2015; Stewart et al. 2016). Even though the collapse of the Alewife population in Lake Huron in 2003 (and the associated decline in the Chinook Salmon fishery) may have been precipitated by a cold winter (Dunlop and Riley 2013), Alewife had not returned to high abundances in Lake Huron as of 2014 (Roseman et al. 2015). Failure of the Alewife population to recover from collapse has been attributed to declines in lower trophic-level production (Barbiero et al. 2011; Bunnell et al. 2014; but see He et al. 2015). In Lake Michigan, concerns of a similar Alewife collapse led to a decrease in the number of Chinook Salmon stocked. If lower trophic-level production declines in Lake Ontario, a similar management action could be considered. On the other hand, in Lake Erie, which supplies most of the water in Lake Ontario, eutrophication is increasing and so are harmful algal blooms. Thus, there is also a concern that nutrient levels and algal blooms could increase in Lake Ontario, especially in the nearshore. Solutions to the two processes of concern—eutrophication in the nearshore and oligotrophication in the offshore—may be mutually exclusive. In either circumstance, fisheries management needs information on the productivity of lower trophic levels in Lake Ontario. In this chapter, we review the status of lower trophic levels in Lake Ontario with special attention to the current (2008-2013) and previous (2003-2007) reporting periods. During the two reporting periods, three whole-lake surveys of lower trophic levels were conducted: the Lower Trophic Level Assessment (LOLA) in 2003 and 2008 (Makarewicz and Howell 2012; Munawar et al. 2015b) and the Cooperative Science and Management Initiative (CSMI) in 2013. Analyses of the CSMI data are ongoing. In addition to the three one-year sources of information on lower trophic levels, several multi-year sources of information are available, including data from the surveillance program conducted since 1965 by Environment Canada (EC) (Dove 2009), monitoring conducted since 1980 by the U.S. Environmental Protection Agency’s (EPA) Great Lakes National Program Office (GLNPO) (Barbiero et al. 2014; Reavie et al. 2014), sampling for a Bioindex Program at two stations, one offshore and one in the Eastern Basin, assessments of Mysis diluviana (formerly Mysis relicta) conducted since 1980 by Fisheries and Oceans Canada (Johannsson et al. 1998, 2011) and the Ontario Ministry of Natural Resources and Forestry (OMNRF), and monitoring conducted since 1995 by the Biomonitoring Program (BMP) on the New York side of the lake (Holeck et al. 2015b). The BMP is a collaboration of the New York State Department of Environmental Conservation (DEC), U.S. Fish and Wildlife Service, U.S. Geological Survey (USGS), and Cornell University.

Special Publication↗

Encounter rates and catch-and-release mortality of steelhead in the Snake River basin

Objective The potential influence (i.e., impact rate) of catch-and-release fisheries on wild steelhead Oncorhynchus mykiss is poorly understood and is a function of the abundance of wild fish, how many fish are encountered by anglers (i.e., encounter rate), and the mortality of fish that are caught and released. In Idaho, estimates of wild steelhead encounter rates have been derived using the number of wild and hatchery steelhead passing Lower Granite Dam, the number of hatchery steelhead harvested, and the number of hatchery steelhead caught and released. The method includes assumptions that hatchery and wild steelhead have equal encounter rates and catch-and-release mortality is 5% for wild steelhead. Here, we investigated wild and hatchery steelhead encounter rates by anglers, estimated catch-and-release mortality, and concatenated both aspects to examine how existing recreational steelhead fisheries influence wild steelhead mortality. Methods We sampled, tagged, and released 1,251 spawn-year 2020 (SY2020) and 1,956 spawn-year 2021 (SY2021) adult steelhead at Lower Granite Dam with T-bar anchor tags and passive integrated transponder (PIT) tags to estimate steelhead encounter rates and catch-and-release mortality. Differences in survival of caught steelhead and those not reported as caught were evaluated using detections at various locations (e.g., PIT arrays, weirs). Result Estimated encounter rates were 43.7% (95% credible interval; 28.2%, 100.0%) for wild fish and 46.7% (29.6%, 100.0%) for adipose-clipped fish in SY2020. In SY2021, encounter rates were 47.2% (32.4%, 100.0%) for wild fish and 52.3% (37.1%, 100.0%) for adipose-clipped fish. Based on detections of caught fish and those not reported as caught, catch-and-release mortality of wild steelhead was estimated to be 1.6% (0.0%, 5.2%). Wild steelhead impact rates were 0.7% (0.0%, 2.7%) in SY2020 and 0.7% (0.0%, 2.8%) in SY2021. Conclusion Estimated rates of impact on wild steelhead were consistent and low across years despite major differences in the structure of the fisheries. Our results suggest assuming that encounter rates are equal between hatchery and wild steelhead, and that steelhead catch-and-release mortality is 5%, will likely lead to a conservative estimate of the wild steelhead impact occurring from catch-and-release fisheries.

Idaho, Oregon, Washington↗

Feeding behavior and temperature and light tolerance of Mysis relicta in the laboratory

Live specimens of Mysis relicta from Lake Michigan were held for one year in the laboratory to determine feeding behavior and tolerance to light and temperature. Mysids fed by moving with rapid, horizontal jerking motions toward food as it settled toward the bottom and by swimming slowly, upside down, to gather particles floating on the surface. Scavenging was common. Mysids tolerated considerably higher temperatures than previously reported. Temperature increases (from 5 C) of 1 C per day and 1 C per minute resulted in TL m values of 20.5 C and 20.4 C, respectively. Mortality increased rapidly at temperatures above 13 C. The upper lethal limit for mysids acclimated to 5 C was about 22 C. Survival under continuous, high light intensity (32 foot-candles) was considerably higher than previously reported. Low water temperature (5 C) may have increased light tolerance.

Transactions of the American Fisheries Society↗

Reproductive health of yellow perch, Perca flavescens, in Chesapeake Bay Tributaries

Yellow perch live in creeks, rivers, ponds, lakes, and estuaries across the central and eastern United States and Canada. In Chesapeake Bay, they tolerate salinities up to one-third that of seawater. The adults reside in the brackish waters of the bay’s tributaries and migrate upstream to spawn. Yellow perch are eagerly sought by recreational fishermen for their excellent taste and, because their late winter spawning runs are the earliest of the year, they are regarded as a harbinger of spring. Yellow perch also support a small but valuable, tightly regulated commercial fishery in the part of Chesapeake Bay that lies in Maryland.

Maryl↗

Biological and ecological science for Wisconsin—A Great Lakes and Rivers State

Wisconsin and natural resources go hand-in-hand. Tourism, which generates $ 19 billion annually and sustains about 200,000 jobs, depends on an abundance of lakes, rivers, shorelines, and woodlands for fishing, hunting, boating, and other outdoor recreation. Rivers and floodplains in the Upper Mississippi Basin, including the Mississippi River, are part of a five-State corridor that generates more than $ 300 billion annually and sustains millions of manufacturing, tourism, transportation, and agricultural jobs. Wisconsin also is a Great Lakes State with more than 800 miles of shoreline, and the fisheries of lakes Superior and Michigan deliver $ 185 million annually and provide thousands of jobs.

Wisconsin↗

Crims Island-Restoration and monitoring of juvenile salmon rearing habitat in the Columbia River Estuary, Oregon, 2004-10

Under the 2004 Biological Opinion for operation of the Federal Columbia River Power System released by the National Marine Fisheries Service, the U.S. Army Corps of Engineers (USACE), the Bonneville Power Administration (BPA), and the Bureau of Reclamation (Reclamation) were directed to restore more than 4,047 hectares (10,000 acres) of tidal marsh in the Columbia River estuary by 2010. Restoration of Crims Island near Longview, Washington, restored 38.1 hectares of marsh and swamp in the tidal freshwater portion of the lower Columbia River. The goal of the restoration was to improve habitat for juveniles of Endangered Species Act (ESA)-listed salmon stocks and ESA-listed Columbian white-tailed deer. The U.S. Geological Survey (USGS) monitored and evaluated the fisheries and aquatic resources at Crims Island in 2004 prior to restoration (pre-restoration), which began in August 2004, and then post-restoration from 2006 to 2009. This report summarizes pre- and post-restoration monitoring data used by the USGS to evaluate project success. We evaluated project success by examining the interaction between juvenile salmon and a suite of broader ecological measures including sediments, plants, and invertebrates and their response to large-scale habitat alteration. The restoration action at Crims Island from August 2004 to September 2005 was to excavate a 0.6-meter layer of soil and dig channels in the interior of the island to remove reed canary grass and increase habitat area and tidal exchange. The excavation created 34.4 hectares of tidal emergent marsh where none previously existed and 3.7 hectares of intertidal and subtidal channels. Cattle that had grazed the island for more than 50 years were relocated. Soil excavated from the site was deposited in upland areas next to the tidal marsh to establish an upland forest. Excavation deepened and widened an existing T-shaped channel to increase tidal flow to the interior of the island. The western arm of the existing 'T-channel' was extended westward and connected to Bradbury Slough to create a second outlet to the main river. New intertidal channels were constructed from the existing 'T-channel' and tidal mudflats became inundated at high tide to increase rearing habitat for juvenile salmonids. The restoration action resulted in a 95-percent increase in available juvenile salmon rearing habitat. We collected juvenile salmon and other fishes at Crims Island and a nearby reference site using beach seines and fyke nets annually from March through August during all years. Benthic invertebrates were collected with sediment corers and drift invertebrates were collected with neuston nets. Juvenile salmon stomach contents were sampled using lavage. Vegetation and sediments characteristics were surveyed and we conducted a topographic/bathymetric survey using a RTK (real time kinematic) GPS (global positioning system). The fish assemblage at Crims Island, composed primarily of threespine stickleback (Gasterosteus aculeatus), non-native banded killifish (Fundulus diaphanus), peamouth chub (Mylocheilus caurinus), subyearling Chinook salmon (Oncorhynchus tshawytscha) (hereinafter referred to as subyearlings), and small numbers of juvenile chum salmon (Oncorhynchus keta), did not differ appreciably pre- and post-restoration. Subyearlings were the primary salmonid collected and were seasonally abundant from April through May during all years. The abundance of juvenile salmon declined seasonally as water temperature exceeded 20 degrees C in the Reference site by mid-June; however, subyearlings persisted at the Mainstem site and in subtidal channels of the Restoration site through the summer in water temperatures exceeding 22 degrees C. Residence times of subyearlings in Crims Island backwaters generally were short consisting of one or two tidal cycles. Median residence time was longer in the Restoration site than in the Reference site pre- and post-restoration. Small (mean = 55.7 millimeters) subyea

Scientific Investigations Report↗

Influence of throat configuration and fish density on escapement of channel catfish from hoop nets

In recent years, several state agencies have adopted the use of baited, tandemset hoop nets to assess lentic channel catfish Ictalurus punctatus populations. Some level of escapement from the net is expected because an opening exists in each throat of the net, although factors influencing rates of escapement from hoop nets have not been quantified. We conducted experiments to quantify rates of escapement and to determine the influence of throat configuration and fish density within the net on escapement rates. An initial experiment to determine the rate of escapement from each net compartment utilized individually tagged channel catfish placed within the entrance (between the two throats) and cod (within the second throat) compartments of a single hoop net for overnight sets. From this experiment, the mean rate (±SE) of channel catfish escaping was 4.2% (±1.5) from the cod (cod throat was additionally restricted from the traditionally manufactured product), and 74% (±4.2) from the entrance compartments. In a subsequent experiment, channel catfish were placed only in the cod compartment with different throat configurations (restricted or unrestricted) and at two densities (low [6 fish per net] and high [60 fish per net]) for overnight sets to determine the influence of fish density and throat configuration on escapement rates. Escapement rates between throat configurations were doubled at low fish density (13.3 ± 5.4% restricted versus 26.7 ± 5.6% unrestricted) and tripled at high fish density (14.3 ± 4.9% restricted versus 51.9 ± 5.0% unrestricted). These results suggest that retention efficiency is high from cod compartments with restricted throat entrances. However, managers and researchers need to be aware that modification to the cod throats (restrictions) is needed for hoop nets ordered from manufacturers. Managers need to be consistent in their use and reporting of cod end throat configurations when using this gear.

American Fisheries Society Symposium↗

Quality of Wisconsin stormwater, 1989-94

Water-quality data were compiled from four urban stormwater monitoring projects conducted in Wisconsin between 1989 and 1994. These projects included monitoring in both storm-sewer pipes and urban streams. A total of 147 constitu ents were analyzed for in stormwater sampled from 10 storm-sewer pipes and four urban streams. Land uses represented by the storm-sewer watersheds included residential, commercial, industrial, and mixed. For about one-half the con stituents, at least 10 percent of the event mean con centrations exceeded the laboratory's minimum reporting limit. Detection frequencies were greater than 75 percent for many of the heavy metals and polycyclic aromatic hydrocarbons in both the storm sewer and stream samples, whereas detec tion frequencies were about 20 percent or greater for many of the pesticides in both types of sam ples. Stormwater concentrations for conventional constituents, such as suspended solids, chloride, total phosphorus, and fecal coliform bacteria were greater than minimum reporting limits almost 100 percent of the time. Concentrations of many of the constituents were high enough to say that stormwater in the storm sewers and urban streams might be contrib uting to the degradation of the streams. In this report, constituents defined as potential contami nants are those for which the laboratory minimum report limit was exceeded for at least 10 percent of the sampled storm events, and for which at least one event mean concentration exceeded an estab lished water-quality standard. Storm-sewer sam ples had event mean concentrations of lead, copper, zinc, cadmium, and silver that frequently exceeded Wisconsin's acute toxicity criteria for cold water fisheries. Wisconsin's human cancer criteria was exceeded almost 100 percent of the time for polycyclic aromatic hydrocarbons in stormwater samples from storm sewers and streams. Maximum concentrations of diazinon found in storm sewers exceeded recommended levels of diazinon. Storm-sewer samples also exceeded Wisconsin's ground-water enforcement standards for pesticides, PCB's, phthalates, and chloride. Defined by criteria in this report, poten tial contaminants included five metals (lead, zinc, copper, silver, and cadmium), nine polycyclic aro matic hydrocarbons, Bis(2-ethylhexyl)phthalate, four pesticides (DDT, atrazine, alachlor, and 2,4 D), suspended solids, chlorides, total phosphorus, BOD 5-day, and bacteria. Wisconsin stormwater quality was similar to stormwater quality monitored in other states. Nearly one-half of median concentrations of con stituents in Wisconsin stormwater were within 30 percent of the medians from other states. The clos est agreement was seen for biochemical oxygen demand, total phosphorus, and total recoverable zinc. Similarities in stormwater quality for the storm sewer and urban streams indicated the storm sewers were a major source of water to the streams during storm events. Concentrations of potential contaminants in urban streams increased dramati cally during storm events as compared to baseflow concentrations.

Wisconsin↗