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At least 361 records · Page 20Linked to original sources

USGS2016

Automated tracking of lava lake level using thermal images at Kīlauea Volcano, Hawai’i

Tracking the level of the lava lake in Halema‘uma‘u Crater, at the summit of Kīlauea Volcano, Hawai’i, is an essential part of monitoring the ongoing eruption and forecasting potentially hazardous changes in activity. We describe a simple automated image processing routine that analyzes continuously-acquired thermal images of the lava lake and measures lava level. The method uses three image segmentation approaches, based on edge detection, short-term change analysis, and composite temperature thresholding, to identify and track the lake margin in the images. These relative measurements from the images are periodically calibrated with laser rangefinder measurements to produce real-time estimates of lake elevation. Continuous, automated tracking of the lava level has been an important tool used by the U.S. Geological Survey’s Hawaiian Volcano Observatory since 2012 in real-time operational monitoring of the volcano and its hazard potential.

Hawaii↗

USGS2025

Monitoring lava lake fluctuations and crater refilling with continuous laser rangefinders

The U.S. Geological Survey’s Hawaiian Volcano Observatory (HVO) has developed a new method to continuously monitor lava lake elevations. Since 2018, HVO has stationed a laser rangefinder on Kīlauea’s caldera rim. The instrument automatically measures lava lake elevation each second, with centimeter accuracy. A stream of elevation data flows to HVO’s database and public website, contributing a valuable channel to HVO’s volcano monitoring network. The data display is intuitive for users, providing essential information with a new level of clarity. HVO has used this method to track Kīlauea’s changing lava lake elevations over a series of eruptions, and the time series data show several volcanic processes: crater refilling, gas pistoning, lava lake surface behavior, and endogenous crater floor uplift. This technique is versatile, nimble, and easy to use. Continuous laser rangefinders may also prove useful for tracking lava lakes elsewhere, and for monitoring other hazards such as growing lava domes and debris flows.

Hawaii↗

USGS2026

Seeing is believing: Livestream video monitoring of Hawaiian eruptions

Livestream video has become a crucial tool for volcano monitoring in recent years, building upon the use of webcam snapshots that have been common for the past two decades. In Hawaii, livestream video was first tested in 2018, and today, livestream video is a vital tool for the Hawaiian Volcano Observatory and partner agencies (National Park Service and Hawaiʻi County Civil Defense) as well as the public. Its role in volcano monitoring has been highlighted by the 2024–present summit eruption of Kīlauea—where three livestream video feeds provide a continuous and easily accessible view of the activity for the public. Here, we describe the methodology and equipment used for the livestream cameras in Hawaii and discuss the benefits and challenges of livestream video monitoring. We show how the nature of livestream video has fundamentally changed volcano monitoring, providing an “up-close” view to the world that was previously limited to observatory field staff. The livestream video feeds, coupled with the historical summit lava fountains, have provided an unprecedented level of engagement with the public, both local and worldwide.

Hawaii↗

USGS2014

Visual pigments, oil droplets, lens, and cornea characterization in the whooping crane (Grus americana)

Vision has been investigated in many species of birds, but few studies have considered the visual systems of large birds and the particular implications of large eyes and long-life spans on visual system capabilities. To address these issues we investigated the visual system of the whooping crane Grus americana (Gruiformes, Gruidae), which is one of only two North American crane species. It is a large, long-lived bird in which UV sensitivity might be reduced by chromatic aberration and entrance of UV radiation into the eye could be detrimental to retinal tissues. To investigate the whooping crane visual system we used microspectrophotometry to determine the absorbance spectra of retinal oil droplets and to investigate whether the ocular media (i.e. the lens and cornea) absorb UV radiation. In vitro expression and reconstitution was used to determine the absorbance spectra of rod and cone visual pigments. The rod visual pigments had wavelengths of peak absorbance (λ max ) at 500 nm, whereas the cone visual pigment λ max values were determined to be 404 nm (SWS1), 450 nm (SWS2), 499 nm (RH2) and 561 nm (LWS), similar to other characterized bird visual pigment absorbance values. The oil droplet cut-off wavelength (λ cut ) values similarly fell within ranges recorded in other avian species: 576 nm (R-type), 522 nm (Y-type), 506 nm (P-type) and 448 nm (C-type). We confirm that G. americana has a violet-sensitive visual system; however, as a consequence of the λ max of the SWS1 visual pigment (404 nm), it might also have some UV sensitivity.

Journal of Experimental Biology↗

USGS1993

Survival in pond water of four reoviruses isolated from aquatic animals

The viabilities of golden shiner virus (GSV), chum salmon virus (CSV), oyster reovirus 13P2 (13P2). and catfish reovirus (CRV) were compared following viruses incubation in pond water samples held at 4°. 20°, 25°, and 30°C for one month. At the three higher temperatures tested, viral infectivity was lost by day 15 for GSV, day 20 for CSV, and day 10 for CRV and 13P2. At 4°C. no infectious GSV was detected at day 15, while the other viruses showed little or no loss of infectivity during the 30-day incubation period. The survival of these viruses in natural waters appears to be sufficient to sustain fish-to-fish transmission.

Journal of Applied Aquaculture↗

USGS1980

The provenance of rutile.

Most coarse detrital rutile is derived from high-grade metamorphic rocks. Contrary to a conventional assumption, independent rutile grains are particularly rare in igneous rocks except alkalic rocks. The use of rutile in the ZTR (zircon-tourmaline-rutile) index of mineralogic maturity is only partially valid, owing to its restricted provenance.

Journal of Sedimentary Petrology↗

USGS1984

Submarine sand dunes and sedimentary environments in Oceanographer Canyon.

Observations from research submersibles in the northern part of Oceanographer Canyon reveal the presence of an extensive field of large sand dunes on the canyon floor. The dunes are medium to coarse sand, are oriented across the axis, and the largest of them are as high as 3 m and have wavelengths up to 15 m. Their asymmetry, grain size, and height suggest that they are formed by axial currents flowing up- and downcanyon and that the largest dunes require flows of at least 70 cm/sec. Shelf sand, low in silt and clay content, is transported by currents down and along the canyon walls onto the canyon floor. As the sand enters the canyon, it is mixed with immobile gravel deposits on the canyon rim; lower on the walls, the sand is mixed with silt and clay burrowed by organisms from the semiconsolidated sandy silt that underlies the canyon walls and floor. Upon reaching the canyon floor, the sand is sculpted into bed forms by currents, and the fines are winnowed out and transported out of the canyon. At present, the shelf and canyon walls are being eroded by bottom currents and burrowing organisms, whereas the canyon floor is covered by mobile sand that moves both up and down the axis in this part of the canyon.

Journal of Sedimentary Petrology↗

USGS1956

Heavy-mineral suites in unconsolidated Paleocene and younger sands, western Tennessee

Heavy-mineral suites from unconsolidated sands of Wilcox and Claiborne age (Eocene) in the subsurface of western Tennessee were tabulated and compared with heavy-mineral suites obtained from outcropping sands known to be of Midway (Paleocene) and Wilcox age and younger. In the subsurface at Memphis, both pink and colorless garnet are relatively abundant in the Claiborne but rare in the Wilcox. Garnet, however, is very rare in both the Claiborne and the Wilcox in the subsurface 35 miles northeast of Memphis. The mineral is very rare also in the terrace sands of western Tennessee and in samples of the Pliocene(?) and Pleistocene deposits of the Tennessee River in eastern and western Tennessee. It is possible, therefore, that the relative abundance of the mineral garnet is related to the quantity of sediment received from differing source areas in Wilcox and Claiborne times, but that, owing to the shifting of the axis of the embayment, no one source area furnished all the sediment for any formation. Heavy-mineral suites from Pliocene(?) and Pleistocene terrace deposits of the Tennessee River in both eastern and western Tennessee, and heavy-mineral suites from Pliocene(?) deposits of the Mississippi River are much alike, and the only isotropic mineral noted in these sediments was a very rare green mineral. Heavy-mineral suites from Recent deposits of the Mississippi River at Memphis and reported heavy-mineral suites from Cambrian sandstones of Wisconsin and Minnesota differ greatly from heavy-mineral suites of Pliocene(?) terrace deposits of the Tennessee and Mississippi Rivers and include much pink and colorless garnet. The possibility, therefore, is suggested that the Pliocene(?) terrace deposits of the Mississippi River in western Tennessee were derived largely from the basin of the Tennessee River.

Tennessee↗

USGS1997

Rare earth elements in weathering profiles and sediments of Minnesota: Implications for provenance studies

The relative abundance of rare earth elements in sediments has been suggested as a tool for determining their source rocks. This correlation requires that weathering, erosion, and sedimentation do not alter the REE abundances, or do so in a predictable manner. We find that the rare earth elements are mobilized and fractionated by weathering, and that sediments derived from the weathered materials can display modifications of the original pattern of rare earth elements of some due to grain-size sorting of the weathered material. However, the REE distribution pattern of the provenance terrane can be recognized in the sediments.

Journal of Sedimentary Research↗

USGS1989

Enhanced detection of infectious hematopoietic necrosis virus by pretreatment of cell monolayers with polyethylene glycol

To improve quantification of very low levels of infectious hematopoietic necrosis virus (IHNV) in samples of tissue, ovarian fluid, or natural water supplies, we tested the ability of polyethylene glycol (PEG) to enhance the sensitivity and speed of the plaque assay system. We compared 4, 7, and 10% solutions of PEG of molecular weight 6,000, 8,000, or 20,000 applied at selected volumes and for various durations. When cell monolayers of epithelioma papulosum cyprini (EPC), fathead minnow (FHM), chinook salmon embryo (CHSE-214), and bluegill fry (BF2) were pretreated with 7% PEG-20,000, they produced 4-17-fold increases in plaque assay titers of IHNV. The plaque assay titers of viral hemorrhagic septicemia virus, chum salmon reovirus, and chinook salmon paramyxovirus were also enhanced by exposure of CHSE-214 cells to PEG, but the titers of infectious pancreatic necrosis virus and Oncorhynchus masou virus were not substantially changed. Plaques formed by IHNV on PEG-treated EPC cells incubated at 15°C had a larger mean diameter at 6 d than those on control cells at 8 d; this suggests the assay could be shortened by use of PEG. Pretreatment of EPC cell monolayers with PEG enabled detection of IHNV in some samples that appeared negative with untreated cells. For example, when ovarian fluid samples from chinook salmon Oncorhynchus tshawytscha were inoculated onto untreated monolayers of EPC cells, IHNV was detected in only 11 of 51 samples; 17 of the samples were positive when PEG-treated EPC cells were used. PDF

Journal of Aquatic Animal Health↗

USGS1990

Multiplication of infectious hematopoietic necrosis virus in rainbow trout following immersion infection: whole-body assay and immunohistochemistry

The sites of replication of infectious hematopoietic necrosis virus (IHNV) in infected tissues were detected in fingerling rainbow trout Oncorhynchus mykiss by in situ histologic techniques following immersion infection. Virus antigens in tissues were detected by a neutralizing mouse monoclonal antibody and a one-step anti-mouse biotin-streptavidin conjugated to horseradish peroxidase. The efficiency of infection and virulence of the virus determined by mortality rates showed high virulence of the selected IHNV isolates, and viral replication in individual fish showed that virus content of the fish increased rapidly from the second day to the seventh day postinfection. The earliest viral lesions following infection were detected in the epidermis of the pectoral fins, opercula, and ventral surface of the body. Virus lesions became evident in kidneys on the third day. By the fifth day, when there was a significant increase in virus titer, foci of viral replication were detected in gill tissue and in the anterior internal tissues below the epidermis. Subsequently, extensive virus replication and tissue destruction were observed in the spleen, dorsal adipose tissues, ventricle, and pseudobranch. Replication in the liver, the muscularis layers of the digestive tract, and the general body musculature followed later. These infection experiments indicated that the epidermis and gills of fish constitute important sites of early IHNV replication.

Journal of Aquatic Animal Health↗

USGS1992

Physiological and hematological changes in Chum Salmon artificially infected with Erythrocytic Necrosis virus

Chum salmon Oncorhynchus keta were injected with erythrocytic necrosis virus (ENV) to study the physiological and hematological consequences of ENV infection. Infected and control fish were held in pathogen-free seawater and sampled for 5 weeks. Physiological tests included measures of plasma cortisol, glucose, protein, and osmolality; blood lactic acid; and liver glycogen. In general, ENV-infected fish had lower plasma glucose and blood lactic acid, and higher liver glycogen concentrations than did control fish. Hematological tests included red and white blood cell (RBC and WBC) counts, hematocrit, measurement of blood hemoglobin concentration, and a determination of erythrocyte fragility. Infected fish had lower RBC counts, hematocrits, and hemoglobin concentrations; higher WBC counts; and less fragile erythrocytes than did control fish. The hematology data indicated that erythrocytes of infected fish had higher mean corpuscular volume, depressed mean corpuscular hemoglobin concentration, and slightly lower mean corpuscular hemoglobin. Erythrocytic inclusions were observed in the cytoplasm of RBCs from infected fish. The infection progressed steadily through week 4, after which the fish appeared to begin recovering. In a second study, fish were infected with ENV for 3 weeks, and recovery from a stress challenge test was measured. Plasma glucose concentrations and osmclality were higher in infected fish, whereas plasma cortisol and blood lactate were only slightly elevated. These studies indicate that chum salmon withstood the effects of ENV infection without in-eversible physiological consequences. However, when subjected to a stress challenge test, infected fish recovered more slowly than control fish and had increased osmoregulatory difficulties.

Journal of Aquatic Animal Health↗

USGS1992

In vitro infection of salmonid epidermal tissues by infectious hematopoietic necrosis virus and viral hemorrhagic septicemia virus

The ability of two rhabdoviruses, infectious hematopoietic necrosis virus (IHNV) and viral hemorrhagic septicemia virus (VHSV), to infect fish skin was investigated by in vitro infection of excised tissues. Virus replication was determined by plaque assay of homogenized tissue extracts, and the virus antigen was detected by immunohistology of tissue sections. Gill, fin, and ventral abdominal skin tissues of rainbow trout Oncorhynchus mykiss that had been infected in vitro with a virulent strain of IHNV (193–110) produced substantial increases in virus titer within 24 h. Titers continued to increase up until day 3 of incubation; by this time, virus had increased 1,000-fold or more. This increase in IHNV titer occurred in epidermal tissues of fingerlings and of older fish. In another experiment, IHNV replicated in excised rainbow trout tissues whether the fish had been subject to prior infection with a virulent strain of IHNV (Western Regional Aquaculture Consortium isolate) or whether the fish had been infected previously with an attenuated strain of the virus (Nan Scott Lake, with 100 passes in culture). A virulent strain of VHSV (23/75) replicated effectively in excised gill tissues and epidermal tissues of rainbow trout and chinook salmon O. tshawytscha ; however, the avirulent North American strain of VHSV (Makah) replicated poorly or not at all.

Journal of Aquatic Animal Health↗

USGS1993

Effects of repetitive formalin treatments on channel catfish juveniles

Channel catfish Icialurus punctatus ranging from 70 to 148 mm in total length were treated with formalin at a concentration of 25 μL/L for 4 h daily on four successive days each week over a 28-week period beginning in mid-September. Coefficients of condition (weight-tolength ratios) and histological examinations of gill tissues were used to evaluate health of fish exposed to formalin. Gill tissues of both formalin-treated and untreated fish showed effects typical of intensive culture, including hypertrophy, hyperplasia, and excess mucous secretion; no differences were found in gill morphometry between the two groups. Channel catfish periodically treated with formalin had a significantly higher coefficient of condition (P < 0.05) after 28 weeks and no indication of adverse effects attributable to formalin.

Journal of Aquatic Animal Health↗

USGS1998

Isolation of Acholeplasma laidlawii from centrarchids in a Central Florida Lake

In 1991, the poor physical condition of largemouth bass Micropterus salmoides from Lake Harris, Florida, was associated with the decline of the lake's fishery. The swim bladders of emaciated bass had mild inflammation and ecchymotic hemorrhages. A mycoplasma-like organism isolated from swim bladders was initially believed to be the causative agent. The organism was later identified as Acholeplasma laidlawii by using a fluorescent antibody procedure and was demonstrated to be nonpathogenic. Parenteral injection of the organism into healthy largemouth bass fingerlings produced no signs of disease or difference in growth rate compared with control fish during a 16-month period. Field studies resulted in isolation of A. laidlawii from black crappies Pomoxis nigromaculatus , bluegills Lepomis macrochirus , and redear sunfish L. microlophus , but not from noncentrarchids in Lake Harris or from any fish species in a control fishery (Lake Holly, Florida). The absence of organisms in all emaciated bass, our inability to reproduce the disease, and isolation of the organism from seemingly healthy fish suggest this organism was not pathogenic.

Journal of Aquatic Animal Health↗

USGS1998

Vaccination of rainbow trout against infectious hematopoietic necrosis (IHN) by using attenuated mutants selected by neutralizing monoclonal antibodies

A neutralizing monoclonal antibody against infectious hematopoietic necrosis virus (IHNV) was used to select neutralization-resistant mutants from isolates of virus obtained from adult steelhead Oncorhynchus mykiss returning to the Round Butte Hatchery (RB mutants) on the Deschutes River in Oregon, USA, and from rainbow trout (nonanadromous O. mykiss) at a commercial hatchery in the Hagerman Valley of Idaho, USA (193-110 mutants). Two of the mutants, RB-1 and 193-110-4, were significantly (P < 0.001) attenuated compared with parental strains. Vaccination of rainbow trout by waterborne exposure to the mutants conferred solid protection against challenge with wild-type virus. In some trials, fish vaccinated with the RB-1 mutant at 50% tissue culture infectious doses (TCID50) of 1 X 104-1 x 105 TCID50/mL or with the 193-110-4 mutant at 1 x 102-1 x 103 TCID50/mL, held for 14 d, then challenged with the homologous wild-type strain at 1 x 105 TCID50/mL showed relative percent survival of 95-100% (P < 0.005). There was no significant difference (P > 0.05) in protection among fish exposed to the RB-1 vaccine strain at a dose of 1 x 105 TCID50/mL for periods of either 1, 12, or 24 h, held for 14 d, and then challenged with the wild-type RB isolate, although the 1-h exposure seemed to be somewhat less effective. Fish were vaccinated with the RB-1 strain at 1 x 103-1 x 105 TCID50/mL for 24 h then challenged after 1, 7, 14, or 21 d with the wild-type RB isolate. No significant (P > 0.1) protection was observed at 1 d postvaccination, but the relative percent survival increased progressively at each subsequent challenge period, becoming statistically significant by day 7 (P < 0.001) and beyond. These results suggested that resistance to challenge with wild-type virus resulted from development of IHNV-specific immunity and not from viral interference or interferon induction, and they reinforce the potential of an attenuated vaccine to control this important disease.

Journal of Aquatic Animal Health↗

USGS2001

Epidemiology of viral hemorrhagic septicemia (VHS) among juvenile Pacific herring and Pacific sandlances in Puget Sound, Washington

Viral hemorrhagic septicemia (VHS) and the associated virus (VHSV) were identified in newly metamorphosed Pacific herring Clupea pallasi and Pacific sand lances Ammodytes hexapterus captured from Puget Sound, Washington, between 1995 and 1998. During that 4-year period, virus was detected in less than 1% of free-ranging, age-0 Pacific herring; however, when groups of these fish were confined in the laboratory, they experienced severe mortality, occasionally exceeding 50%, with the prevalence of VHSV reaching 100% by 14 d postcapture. At 7–21 d postcapture, VHSV titers peaked in excess of 108 plaque-forming units/g of tissue; by 30 d postcapture, however, the virus could no longer be isolated. Fish surviving beyond 30 d eliminated the virus from their tissues, but some remained lethargic and continued to show signs of hemorrhage around the mouth, skin, and fins until about 6 weeks postcapture. No cutaneous ulcers were observed during either the acute or the recovery phases of infection. Eighteen-month-old Pacific herring captured from the same area were also negative for VHSV but developed active infections after confinement for 7 d. Unlike younger fish, only 8.4% of these older fish died of VHS, and 7.7% of survivors were positive for VHSV at 7–10 d postcapture, which suggests that a higher proportion of the older fish had developed resistance to VHSV from prior exposure to it. Three months after fatalities ceased in the laboratory-held fish, the surviving fish were challenged with 5 3 103 plaque-forming units/mL of VHSV for 1 h. No mortality was observed during the next 30 d, and virus was recoverable at very low titers in fewer than 5% of the challenged fish, indicating the development of an active immunity to VHSV. Laboratory cohabitation of infected wild Pacific herring with laboratory-reared, specific-pathogen-free Pacific herring resulted in transmission of VHSV to the nonimmune fish, with the resulting course of disease resembling that seen in wild Pacific herring confined in the laboratory. The possible effects of VHS on stocks of Pacific herring are discussed.

Journal of Aquatic Animal Health↗

USGS2002

Optimization of nested polymerase chain reaction assays for identification of Aeromonas salmonicida, Yersinia ruckeri and Flavobacterium psychrophilum

Nested polymerase chain reaction (PCR) assays were developed using first-round primers complementary to highly conserved regions within the bacterial 16S ribosomal RNA (rRNA) gene (universal eubacterial primers) and second-round primers specific for sequences within the 16S rRNA genes of Aeromonas salmonicida , Yersinia ruckeri , and Flavobacterium psychrophilum . Following optimization of the MgCl 2 concentration and primer annealing temperature, PCR employing the universal eubacterial primers was used to amplify a 1,500-base-pair (bp) product visible in agarose gels stained with ethidium bromide. The calculated detection limit of this single-round assay was less than 1.4 × 10 4 colony-forming units (CFU) per reaction for all bacterial species tested. Single-round PCR using primer sets specific for A. salmonicida , Y. ruckeri , and F. psychrophilum amplified bands of 271, 575, and 1,100 bp, respectively, with detection limits of less than 1.4 × 10 4 , 1.4 × 10 5 , and 1.4 × 10 5 CFU per reaction. Using the universal eubacterial primers in the first round and the species-specific primer sets in the second round of nested PCR assays improved the detection ability by approximately four orders of magnitude to fewer than 14 CFU per sample for each of the three bacterial species. Such nested assays could be adapted to a wide variety of bacterial fish pathogens for which 16S sequences are available.

Journal of Aquatic Animal Health↗