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At least 361 records · Page 20Linked to original sources
USGS2023

A decade of death and other dynamics: Deepening perspectives on the diversity and distribution of sea stars and wasting

Mass mortality events provide valuable insight into biological extremes and also ecological interactions more generally. The sea star wasting epidemic that began in 2013 catalyzed study of the microbiome, genetics, population dynamics, and community ecology of several high-profile species inhabiting the northeastern Pacific but exposed a dearth of information on the diversity, distributions, and impacts of sea star wasting for many lesser-known sea stars and a need for integration across scales. Here, we combine datasets from single-site to coast-wide studies, across time lines from weeks to decades, for 65 species. We evaluated the impacts of abiotic characteristics hypothetically associated with sea star wasting (sea surface temperature, pelagic primary productivity, upwelling wind forcing, wave exposure, freshwater runoff) and species characteristics (depth distribution, developmental mode, diet, habitat, reproductive period). We find that the 2010s sea star wasting outbreak clearly affected a little over a dozen species, primarily intertidal and shallow subtidal taxa, causing instantaneous wasting prevalence rates of 5%–80%. Despite the collapse of some populations within weeks, environmental and species variation protracted the outbreak, which lasted 2–3 years from onset until declining to chronic background rates of ∼2% sea star wasting prevalence. Recruitment began immediately in many species, and in general, sea star assemblages trended toward recovery; however, recovery was heterogeneous, and a marine heatwave in 2019 raised concerns of a second decline. The abiotic stressors most associated with the 2010s sea star wasting outbreak were elevated sea surface temperature and low wave exposure, as well as freshwater discharge in the north. However, detailed data speaking directly to the biological, ecological, and environmental cause(s) and consequences of the sea star wasting outbreak remain limited in scope, unavoidably retrospective, and perhaps always indeterminate. Redressing this shortfall for the future will require a broad spectrum of monitoring studies not less than the taxonomically broad cross-scale framework we have modeled in this synthesis.

Biological Bulletin↗
USGS2020

Genomes reveal genetic diversity of Piscine orthoreovirus in farmed and free-ranging salmonids from Canada and USA

Piscine orthoreovirus (PRV-1) is a segmented RNA virus which is commonly found in salmonids in the Atlantic and Pacific Oceans. PRV-1 causes the Heart and Skeletal Muscle Inflammation (HSMI) disease in Atlantic salmon and is associated with several other disease conditions. Previous phylogenetic studies of genome segment 1 (S1) identified four main genogroups of PRV-1 (S1 genogroups I – IV). The goal of the present study was to use Bayesian phylogenetic inference to expand our understanding of the spatial, temporal and host patterns of PRV-1 from the waters of the northeast Pacific. To that end, we determined the coding genome sequences of 14 PRV-1 samples that were selected to improve our knowledge of genetic diversity across a broader temporal, geographic and host range, including the first reported genome sequences from the northwest Atlantic (Eastern Canada). Nucleotide and amino acid sequences of the concatenated genomes and their individual segments revealed that established sequences from the northeast Pacific were monophyletic in all analyses. Bayesian inference phylogenetic trees of S1 sequences using BEAST and MrBayes also found that sequences from the northeast Pacific grouped separately from sequences from other areas. One PRV-1 sample (WCAN_BC17_AS_2017) from an escaped Atlantic salmon, collected in British Columbia but derived from Icelandic broodstock, grouped with other S1 sequences from Iceland. Our concatenated genome and S1 analysis demonstrated that PRV-1 from the northeast Pacific is genetically distinct but descended from PRV-1 from the North Atlantic. However, the analyses were inconclusive as to the timing and exact source of introduction into the northeast Pacific, either from eastern North America or European waters of the North Atlantic. There was no evidence that PRV-1 was evolving differently between free-ranging Pacific Salmon and farmed Atlantic Salmon. The northeast Pacific PRV-1 sequences fall within genogroup II based on the classification of Garseth et al. (2013), which also includes North Atlantic sequences from Eastern Canada, Iceland and Norway. The additional full genome sequences herein strengthen our understanding of phylogeographical patterns related to the northeast Pacific, but a more balanced representation of full PRV-1 genomes from across its range, as well additional sequencing of archived samples, are still needed to better understand global relationships including potential transmission links among regions.

Faroe Islands↗
USGS1999

Neogene-quaternary Ostracoda and paleoenvironments, of the Limón basin, Costa Rica, and Bocas del Toro basin, Panama

Tropical marine ostracodes from Neogene and Quaternary sediments of the Central American Caribbean region have been the subject of biostratigraphic, ecological, taxonomic, and evolutionary studies. As part of the Panama Paleontology Project (PPP), Neogene and Quaternary ostracodes are being studied from the Central American region. The overall goal of this research is to evaluate the impact of the emergence of the Central American Isthmus as a land barrier between the Caribbean/tropical Atlantic and the Pacific oceans on marine ostracode biodiversity and the oceanic environments in which extant ostracodes evolved. Due to the ecological specificity of many living tropical ostracode species, they are ideally suited for reconstructing paleoenvironments on the basis of their occurrence in fossil assemblages, which in turn can lead to a better understanding of the tropical climatic and tectonic history of Central America. The principal aims of this chapter are: (a) to document the composition of the ostracode assemblages from the Limón Basin of Costa Rica and the Bocas del Toro Basin of Panama, two areas yielding extensive ma rine ostracode assemblages; (b) to describe the environments of deposition within these basins; and (c) to document the stratigraphic distribution of potentially agediagnostic ostracode species in the Limón and Bocas del Toro basins in order to enhance their use in Central American biostratigraphy. A secondary, but none-the-less important goal is to assemble a database on the distribution of modem ostracode species in the Caribbean and adjacent areas as a basis for comparison with fossil assemblages. Although the ecological, biostratigraphic and paleoenvironmental conclusions presented here will improve as additional material is studied, these fossil and modem ostracode databases constitute the foundation for future evolutionary and geochernical studies of tropical Caribbean and eastern Pacific Ocean ostracodes. Moreover, we present here evidence that major faunal and oceanic changes occurred in the westem Caribbean over the last 4 million years, probably related to changes in ocean circulation due to the emergence of the Isthmus as well as other climatic events.

Bulletins of American Paleontology↗
USGS2020

The effects of phosphatization on the mineral associations and speciation of Pb in ferromanganese crusts

The older layers of thick ferromanganese (FeMn) crusts from the central Pacific Ocean have undergone diagenetic phosphatization, during which carbonate fluorapatite (CFA) filled fractures and pore space and replaced carbonates. The effects of phosphatization on individual trace metal concentrations, speciation, and phase associations in FeMn crusts remain poorly understood yet may be important to metal enrichment mechanisms, paleoceanography, and extractive metallurgy. This study examines the concentrations, speciation, and mineral phase associations of Pb in phosphatized and nonphosphatized layers within three Pacific Ocean crusts using standard chemical and mineralogical techniques, in addition to bulk X-ray absorption spectroscopy (XAS) and microfocused X-ray fluorescence (μ-XRF) mapping. Our findings challenge the conclusions of previous works, which reported that most Pb in phosphatized crusts was associated with the CFA-dominated residual phase after sequential leaching experiments. These results were interpreted as an indication of Pb transfer from the oxide phases to diagenetic CFA during phosphatization. However, our results reveal an inverse correlation of Pb with Ca and P in the μ-XRF mapping of in situ FeMn crust sections and bulk chemistry. Furthermore, XAS measurements reveal that Pb speciation in bulk phosphatized FeMn crust layers is very similar to nonphosphatized layers, indicating only minor, if any, change in speciation during diagenetic phosphatization. Small differences in the EXAFS spectra for one highly phosphatized layer indicate that minor amounts of Pb may have been altered during phosphatization, but the new Pb-bearing phase was not unequivocally identified. Taken together, our results demonstrate that Pb speciation is not significantly affected by phosphatization.

Earth and Space Chemistry↗
USGS2021

Upwelling and the persistence of coral-reef frameworks in the eastern tropical Pacific

In an era of global change, the fate and form of reef habitats will depend on shifting assemblages of organisms and their responses to multiple stressors. Multiphyletic assemblages of calcifying and bioeroding species contribute to a dynamic balance between constructive and erosive processes, and reef-framework growth occurs only when calcium-carbonate deposition exceeds erosion. Each contributing species exhibits a unique combination of environmental sensitivities, trophic needs, and competitive abilities, making the net outcome of their habitat-altering behavior difficult to predict. In this study, standardized blocks of clean, massive Porites were placed at six reef sites in the eastern tropical Pacific, in the strongly and more-weakly upwelling Gulfs of Panamá (GoP) and Chiriquí (GoC), respectively. Sites were chosen to characterize the unique thermal and carbonate-chemistry conditions of each gulf. Satellite products were used to examine differences in sea-surface productivity, and surveys were conducted to quantify the abundance of important grazing taxa. After two years in situ, the Porites blocks were collected and scanned using high-resolution computed tomography to volumetrically quantify both endolithic and epilithic habitat alteration. Scan-volumes were further classified into functional groups according to morphology to quantify external bioerosion by fish and sea urchins, as well as the calcifying and bioeroding activity of crustose coralline algae, scleractinian corals, mollusks, annelids, and barnacles. The GoP, which has higher productivity, cooler temperatures, and periodically lower pH conditions, had higher rates of macroboring, but also higher rates of calcification. These unexpectedly higher rates of calcification in the GoP were a result of high recruitment of suspension-feeding taxa, particularly barnacles and vermiform fauna that have poor reef-forming potential. External bioerosion by grazers was the dominant process influencing these dead coral substrates across both gulfs, contributing to higher rates of net erosion in the GoC and underscoring the important roles that urchins and fish play in not just removing algae on reefs, but also eroding reef habitat. Ultimately these findings reveal that the trophic requirements of habitat-altering taxa are closely tied to reef-framework stability, and that environmental conditions conducive to carbonate precipitation are not necessarily those that will lead to habitat persistence.

Ecological Monographs↗
USGS2022

Spatial extent of seagrasses (Zostera marina and Ruppia maritima) along the central Pacific coast of Baja California, Mexico, 1999–2000

The seagrasses eelgrass ( Zostera marina ) and widgeongrass ( Ruppia maritima ) are prominent features of coastal lagoons along the Pacific coast of Baja California, Mexico, supporting a rich diversity of marine life. Yet little is known about their spatial distribution in this region. This is a concern because of declining trends in the abundance and distribution of seagrass in parts of northern Baja California and southern California. We used 7-band satellite imagery, 4-band digital multispectral videography, and 3-band color aerial photography to map the distribution of eelgrass and widgeongrass in six embayments along the central Pacific coast of Baja California. The total spatial extent of seagrass was estimated to be 42,697 hectares, of which about 70 percent was eelgrass. This seagrass was primarily lower in the intertidal than widgeongrass in all embayments. Eelgrass and widgeongrass composed the greatest proportion (47 percent) of the spatial extent in the two largest embayments, Lagunas Ojo de Liebre and San Ignacio, and these two embayments accounted for 85 percent of all seagrass in the study area. The native cordgrass ( Spartina foliosa ) and pickleweed ( Salicornia spp .) were the predominate vegetation cover type of marshes in the three northern and three southern embayments, respectively. The three southern embayments contained mangrove ( Rhizophora spp.) and the three northern embayments did not, thus marking the northern edge of mangroves along the Pacific coast of North America. This study establishes an embayment-wide baseline for continuing investigations and monitoring future changes in the spatial abundance of seagrasses in central Baja California.

Baja California↗
USGS1999

60 Myr records of major elements and Pb-Nd isotopes from hydrogenous ferromanganese crusts: Reconstruction of seawater paleochemistry

We compare the time series of major element geochemical and Pb- and Nd-isotopic composition obtained for seven hydrogenous ferromanganese crusts from the Atlantic, Indian, and Pacific Oceans which cover the last 60 Myr. Average crust growth rates and age-depth relationships were determined directly for the last about 10 Myr using 10Be/9Be profiles. In the absence of other information these were extrapolated to the base of the crusts assuming constant growth rates and constant initial 10Be/9Be ratios due to the lack of additional information. Co contents have also been used previously to estimate growth rates in Co-rich Pacific and Atlantic seamount crusts (Puteanus and Halbach, 1988). A comparison of 10Be/9Be- and Co-based dating of three Co-rich crusts supports the validity of this approach and confirms the earlier chronologies derived from extrapolated 10Be/9Be-based growth rates back to 60 Ma. Our data show that the flux of Co into Co-poor crusts has been considerably lower. The relationship between growth rate and Co content for the Co-poor crusts developed from these data is in good agreement with a previous study of a wider range of marine deposits (Manheim, 1986). The results suggest that the Co content provides detailed information on the growth history of ferromanganese crusts, particularly prior to 10-12 Ma where the 10Be-based method is not applicable. The distributions of Pb and Nd isotopes in the deep oceans over the last 60 Myr are expected to be controlled by two main factors: (a) variations of oceanic mixing patterns and flow paths of water masses with distinct isotopic signatures related to major paleogeographic changes and (b) variability of supply rates or provenance of detrital material delivered to the ocean, linked to climate change (glaciations) or major tectonic uplift. The major element profiles of crusts in this study show neither systematic features which are common to crusts with similar isotope records nor do they generally show coherent relationships to the isotope records within a single crust. Consequently, any interpretation of time series of major element concentrations of a single crust in terms of paleoceanographic variations must be considered with caution. This is because local processes appear to have dominated over more basin-wide paleoceanographic effects. In this study Co is the only element which shows a relationship to Pb and Nd isotopes in Pacific crusts. A possible link to changes of Pacific deep water properties associated with an enhanced northward advection of Antarctic bottom water from about 14 Ma is consistent with the Pb but not with the Nd isotopic results. The self-consistent profiles of the Pb and Nd isotopes suggest that postdepositional diagenetic processes in hydrogenous crusts, including phosphatization events, have been insignificant for particle reactive elements such as Pb, Be, and Nd. Isotope time series of Pb and Nd show no systematic relationships with major element contents of the crusts, which supports their use as tracers of paleo-seawater isotopic composition.

Geochimica et Cosmochimica Acta↗
USGS1997

The highest global concentrations and increased abundance of oceanic plastic debris in the North Pacific: Evidence from seabirds

Plastic pollution has risen dramatically with an increase in production of plastic resin during the past few decades. Plastic production in the United States increased from 2.9 million tons in I960 to 47.9 million tons in 1985 (Society of the Plastics Industry 1986). This has been paralleled by a significant increase in the concentration of plastic particles in oceanic surface waters of the North Pacific from the 1970s to the late 1980s (Day and Shaw 1987; Day et al. 1990a). Research during the past few decades has indicated two major interactions between marine life and oceanic plastic: entanglement and ingestion (Laist 1987). Studies in the last decade have documented the prevalence of plastic in the diets of many seabird species in the North Pacific and the need for further monitoring of those species and groups that ingest the most plastic (Day et al. 1985).

Book chapter↗
USGS1995

Pasteurella multocida isolated from wild birds of North America: a serotype and DNA fingerprint study of isolates from 1978 to 1993

Serotype and DNA fingerprint methods were used to study Pasteurella multocida isolated from 320 wild birds of North America. Isolates were collected during 1978-93. The HhaI profiles of 314 isolates matched the HhaI profile of somatic reference type 1, strain X-73; somatic type 1 antigen was expressed by 310 isolates, and the serotype of four isolates was undetected. Differentiation of the 314 isolates was observed by digestion of DNA with HpaII. None of the HpaII profiles matched the HpaII profile of X-73 (designated HhaI 001/HpaII 001). Three HpaII profiles were recognized among the somatic type 1 isolates: HpaII 002 (n = 18), HpaII 003 (n = 122), and HpaII 004 (n = 174). Profile HpaII 002 was found among isolates collected during 1979-83. Profile HpaII 003 was identified from isolates collected during 1979-89, with the exception of two isolates in 1992. The HpaII 004 profile was identified from isolates collected during 1983-93. Of the six remaining isolates, four expressed somatic type 4 and had HhaI profiles identical to the somatic type 4 reference strain P-1662 profile (designated HhaI 004); these isolates were differentiated by digestion of DNA with HpaII. One isolate was identified as serotype F:11, and another was serotype A:3,4. In the present study, 314 of 316 (99.4%) isolates from wild birds in the Central, Mississippi, and Pacific flyways during 1978-93, were P. multocida somatic type 1.

Avian Diseases↗
USGS2010

Survival of feral cats, Felis catus (Carnivora: Felidae), on Mauna Kea, Hawai'i, based on tooth cementum lines

Feral cats ( Felis catus ) have spread throughout anthropogenic and insular environments of the world. They now threaten many species of native wildlife with chronic depredation. Knowledge of feral cat population dynamics is necessary to understand their ecological effects and to develop effective control strategies. However, there are few studies worldwide regarding annual or lifetime survival rates in remote systems, and none on Pacific islands. We constructed the age distribution and estimated survival of feral cats in a remote area of Hawai'i Island using cementum lines present in lower canine teeth. Our data suggest annual cementum line formation. A log-linear model estimated annual survival ≥ 1 yr of age to be 0.647. Relatively high survival coupled with high reproductive output allows individual cats to affect native wildlife for many years and cat populations to rebound quickly after control efforts.

Hawaii↗
USGS2003

Wide-angle seismic recording from the 2002 Georgia Basin Geohazards Initiative, northwestern Washington and British Columbia

This report describes the acquisition and processing of shallow-crustal wide-angle seismicreflection and refraction data obtained during a collaborative study in the Georgia Strait, western Washington and southwestern British Columbia. The study, the 2002 Georgia Strait Geohazards Initiative, was conducted in May 2002 by the Pacific Geoscience Centre, the U.S. Geological Survey, and the University of Victoria. The wide-angle recordings were designed to image shallow crustal faults and Cenozoic sedimentary basins crossing the International Border in southern Georgia basin and to add to existing wide-angle recordings there made during the 1998 SHIPS experiment. We recorded, at wide-angle, 800 km of shallow penetration multichannel seismic-reflection profiles acquired by the Canadian Coast Guard Ship (CCGS) Tully using an air gun with a volume of 1.967 liters (120 cu. in.). Prior to this reflection survey, we deployed 48 Refteks onshore to record the airgun signals at wide offsets. Three components of an oriented, 4.5 Hz seismometer were digitally recorded at all stations. Nearly 160,300 individual air gun shots were recorded along 180 short seismic reflection lines. In this report, we illustrate the wide-angle profiles acquired using the CCGS Tully, describe the land recording of the air gun signals, and summarize the processing of the land recorder data into common-receiver gathers. We also describe the format and content of the archival tapes containing the SEGY-formated, common-receiver gathers for the Reftek data. Data quality is variable but the experiment provided useful data from 42 of the 48 stations deployed. Three-fourths of all stations yielded useful first-arrivals to source-receiver offsets beyond 10 km: the average maximum source-receiver offset for first arrivals was 17 km. Six stations yielded no useful data and useful firstarrivals were limited to offsets less than 10 km at five stations. We separately archived our recordings of 86 local and regional earthquakes ranging in magnitude from 0.2 to 4.3 and 16 teleseisms ranging in magnitude 5.5 to 6.5.

British Columbia;Washington↗
USGS2010

Reported Historic Asbestos Mines, Historic Asbestos Prospects, and Other Natural Occurrences of Asbestos in Oregon and Washington

This map and its accompanying dataset provide information for 51 natural occurrences of asbestos in Washington and Oregon, using descriptions found in the geologic literature. Data on location, mineralogy, geology, and relevant literature for each asbestos site are provided. Using the map and digital data in this report, the user can examine the distribution of previously reported asbestos occurrences and their geological characteristics in the Pacific Northwest States of Washington and Oregon. This report is part of an ongoing study by the U.S. Geological Survey to identify and map reported natural asbestos occurrences in the United States, which thus far includes similar maps and datasets of natural asbestos occurrences within the Eastern United States (http://pubs.usgs.gov/of/2005/1189/), the Central United States (http://pubs.usgs.gov/of/2006/1211/), the Rocky Mountain States (http://pubs.usgs.gov/of/2007/1182/), and the Southwestern United States (http://pubs.usgs.gov/of/2008/1095/). These reports are intended to provide State and local government agencies and other stakeholders with geologic information on natural occurrences of asbestos in the United States.

Open-File Report↗
USGS2012

Coastal circulation and sediment dynamics in Pelekane and Kawaihae Bays, Hawaii--measurements of waves, currents, temperature, salinity, turbidity, and geochronology: November 2010--March 2011

Coral reef communities on the Island of Hawaii have been heavily affected by the construction of Kawaihae Harbor in the 1950s and by subsequent changes in land use in the adjacent watershed. Sedimentation and other forms of land-based pollution have led to declines in water quality and coral reef health over the past two decades (Tissot, 1998). Erosion mitigation efforts are underway on land, and there is a need to evaluate the impact of these actions on the adjacent coastal ecosystem. The Kohala Center and Kohala Watershed Partnership was awarded $2.69 million from the National Oceanographic and Atmospheric Administration’s (NOAA) Restoration Center as part of the American Recovery and Reinvestment Act of 2009 to stabilize soil and improve land-use practices in the Pelekane Bay watershed. The grant allowed the Kohala Watershed Partnership to implement various upland watershed management activities to reduce land-based sources of pollution into Pelekane Bay. However, a number of questions must be answered in order to: (1) evaluate the effectiveness of the terrestrial watershed remediation efforts; (2) understand the potential of the local marine ecosystem to recover; and (3) understand the potential threat that existing mud deposits in the bay pose to adjacent, relatively pristine coral reef ecosystems. The goal of this experiment was to help address these questions and establish a framework to evaluate the success of the Kohala Watershed Partnership restoration efforts. This research program will also provide resource managers with information relevant to other watershed restoration efforts currently being planned in neighboring watersheds. This project involved an interdisciplinary team of coral reef biologists from the University of Hawaii Coral Reef Assessment and Monitoring Program, who focused on the impact of sedimentation on the biota of Pelekane Bay, and a team of geologists and oceanographers from the U.S. Geological Survey (USGS), who focused on the circulation and sediment dynamics in Pelekane and Kawaihae Bays. The initial findings from the USGS research program are described in this report. These measurements support the ongoing studies being conducted as part of the USGS Coastal and Marine Geology Program’s Pacific Coral Reef Project to better understand the effect of geologic and oceanographic processes on coral reef systems.

Hawai'i↗
USGS2014

A new Liopropoma sea bass (Serranidae, Epinephelinae, Liopropomini) from deep reefs off Curaçao, southern Caribbean, with comments on depth distributions of western Atlantic liopropomins

Collecting reef-fish specimens using a manned submersible diving to 300 m off Curaçao, southern Caribbean, is resulting in the discovery of numerous new fish species. The new Liopropoma sea bass described here differs from other western Atlantic members of the genus in having VIII, 13 dorsal-fin rays; a moderately indented dorsal-fin margin; a yellow-orange stripe along the entire upper lip; a series of approximately 13 white, chevron-shaped markings on the ventral portion of the trunk; and a reddish-black blotch on the tip of the lower caudal-fin lobe. The new species, with predominantly yellow body and fins, closely resembles the other two “golden basses” found together with it at Curaçao: L. aberrans and L. olneyi . It also shares morphological features with the other western Atlantic liopropomin genus, Bathyanthias . Preliminary phylogenetic data suggest that western Atlantic liopropomins, including Bathyanthias , are monophyletic with respect to Indo-Pacific Liopropoma , and that Bathyanthias is nested within Liopropoma , indicating a need for further study of the generic limits of Liopropoma . The phylogenetic data also suggest that western Atlantic liopropomins comprise three monophyletic clades that have overlapping depth distributions but different depth maxima (3–135 m, 30–150 m, 133–411 m). The new species has the deepest depth range (182–241 m) of any known western Atlantic Liopropoma species. Both allopatric and depth-mediated ecological speciation may have contributed to the evolution of western Atlantic Liopropomini.

Caribbean Sea↗
USGS1981

Food of the Pacific white-sided dolphin, Lagenorhynchus obliquidens, Dall's porpoise, Phocoenoides dalli, and northern fur seal, Callorhinus ursinus, off California and Washington

Our knowledge of the feeding habits of the Pacific white-sided dolphin, Lagenorhynchus obliquidens , and the Dall's porpoise, Phocoenoides dalli , is based on examination of the stomach contents of stranded animals, animals accidentally taken in commercial fishing gear, those taken in the western Pacific commercial fishery, and animals that died during capture attempts. Of these only a few were normally feeding animals taken at sea, whose stomach contents were thoroughly examined. Fished and squids previously identified from stomachs of dolphins and porpoises by various investigators are listed in Table 1. This paper documents the stomach contents of 44 Pacific white-sided dolphin and 9 Dall's porpoise collected at sea off California and Washington. All animals were collected by the authors during pelagic fur seal studies with the exception of three dolphins which were collected by a staff biologist during whale research voyages off California. Comparisons of stomach contents are made between the Pacific white-sided dolphins, Dall's porpoise, and northern fur seal, Callorhinus ursinus , collected near the same locations and usually on the same day. Mention of the dolphin, porpoise , and seal in this paper refers to the above-named species unless noted otherwise.

California, Washington↗
USGS2007

Overview of ground-water recharge study sites

Multiyear studies were done to examine meteorologic and hydrogeologic controls on ephemeral streamflow and focused ground-water recharge at eight sites across the arid and semiarid southwestern United States. Campaigns of intensive data collection were conducted in the Great Basin, Mojave Desert, Sonoran Desert, Rio Grande Rift, and Colorado Plateau physiographic areas. During the study period (1997 to 2002), the southwestern region went from wetter than normal conditions associated with a strong El Niño climatic pattern (1997–1998) to drier than normal conditions associated with a La Niña climatic pattern marked by unprecedented warmth in the western tropical Pacific and Indian Oceans (1998–2002). The strong El Niño conditions roughly doubled precipitation at the Great Basin, Mojave Desert, and Colorado Plateau study sites. Precipitation at all sites trended generally lower, producing moderate- to severe-drought conditions by the end of the study. Streamflow in regional rivers indicated diminishing ground-water recharge conditions, with annual-flow volumes declining to 10–46 percent of their respective long-term averages by 2002. Local streamflows showed higher variability, reflecting smaller scales of integration (in time and space) of the study-site watersheds. By the end of the study, extended periods (9–15 months) of zero or negligible flow were observed at half the sites. Summer monsoonal rains generated the majority of streamflow and associated recharge in the Sonoran Desert sites and the more southerly Rio Grande Rift site, whereas winter storms and spring snowmelt dominated the northern and westernmost sites. Proximity to moisture sources (primarily the Pacific Ocean and Gulf of California) and meteorologic fluctuations, in concert with orography, largely control the generation of focused ground-water recharge from ephemeral streamflow, although other factors (geology, soil, and vegetation) also are important. Watershed area correlated weakly with focused infiltration volumes, the latter providing an upper bound on associated ground-water recharge. Estimates of annual focused infiltration for the research sites ranged from about 10 5 to 10 7 cubic meters from contributing areas that ranged from 26 to 2,260 square kilometers.

Professional Paper↗
USGS2015

Explained and unexplained tissue loss in corals from the Tropical Eastern Pacific

Coral reefs rival rainforest in biodiversity, but are declining in part because of disease. Tissue loss lesions, a manifestation of disease, are present in dominant Pocillopora along the Pacific coast of Mexico. We characterized tissue loss in 7 species of Pocillopora from 9 locations (44 sites) spanning southern to northern Mexico. Corals were identified to species, and tissue loss lesions were photographed and classified as those explainable by predation and those that were unexplained. A focal predation study was done concurrently at 3 locations to confirm origin of explained lesions. Of 1054 cases of tissue loss in 7 species of corals, 84% were associated with predation (fish, snails, or seastar) and the remainder were unexplained. Types of tissue loss were not related to coral density; however there was significant geographic heterogeneity in type of lesion; one site in particular (Cabo Pulmo) had the highest prevalence of predator-induced tissue loss (mainly pufferfish predation). Crown-of-thorns starfish, pufferfish, and snails were the most common predators and preferred P. verrucosa, P. meandrina, and P. capitata , respectively. Of the 9 locations, 4 had unexplained tissue loss with prevalence ranging from 1 to 3% with no species predilection. Unexplained tissue loss was similar to white syndrome (WS) in morphology, indicating additional study is necessary to clarify the cause(s) of the lesions and the potential impacts to dominant corals along the Pacific coast of Mexico.

Diseases of Aquatic Organisms↗