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Introduction to ‘Antarctic climate evolution: View from the margin’

This special issue on “Antarctic Climate Evolution—view from the margin” presents results from modelling studies and reports on geoscience data aimed at improving our understanding of the behaviour of the Antarctic ice sheet and the climate of the region. This research field is of interest because of the sensitivity of the polar regions to global warming, and because of the influence of the Antarctic ice sheet on global sea level and climate through most if not all of the Cenozoic Era. The Antarctic ice sheet both responds to and forces changes on global climate and sea level. We need to be aware of the scale and frequency of these changes if we are to understand past patterns of environmental change elsewhere on earth. It was only three decades ago that we discovered from strata drilled in shelf basins on the Antarctic margin that the Antarctic ice sheet had a history that predated the Quaternary ice ages by over 20 million years ( Hayes et al., 1975 ). Later that year the first interpretation of Antarctic glacial history through the Cenozoic Era from oxygen isotopes, recorded in foraminifera from deep-sea sediment cores, was published ( Shackleton and Kennett, 1975 ). Revisions with a more extensive database have modified the story a little ( Miller et al., 1987 , Zachos et al., 2001 ), and there have been recent attempts to resolve the temperature–ice volume ambiguity ( Lear et al., 2000 ). However, reports on strata drilled on the Antarctic margin have unambiguously shown the character of this huge ice sheet, which was oscillating in the Oligocene ( Barrett et al., 1987 , Barrett, 1999 ) with a period and magnitude comparable with the Northern Hemisphere ice sheets of the Quaternary ( Naish et al., 2001a , Naish et al., 2001b ). In this issue we present further research on the history of the Antarctic ice sheet from Oligocene to recent times, most of them from the Antarctic margin, but with some on the nature of the deep-sea isotope record, and others using recently developed modeling techniques to investigate the influence of atmosphere, ocean and biosphere on past Antarctic climate. This special issue is the third in three years on the theme of Antarctic Climate Evolution. The first followed a workshop in Erice, Sicily, in 2001 to report on results from ANTOSTRAT, a SCAR-sponsored project for gathering and analysing circum-Antarctic seismic data for planning and promoting offshore drilling for climate history. The introduction to that issue (Florindo et al., 2003) provides a review of the recent history of circum-Antarctic drilling by the Ocean Drilling Program (Legs 113, 114, 119, 120, 177, 178, 188 and 189) and the Cape Roberts Project. For a more comprehensive review of earlier drilling in the Ross Sea region (Deep Sea Drilling Project Leg 28, Dry Valley Drilling Project, McMurdo Sound Sediment and Tectonic Studies, Cenozoic Investigations in the western Ross Sea) see Hambrey and Barrett (1993). The first of these issues (Florindo et al., 2003) featured a global plate reconstruction of the Southern Hemisphere through Cenozoic time with emphasis on evolution of Cenozoic seaways (Lawver and Gahagan, 2003) along with a study of the inception and early evolution of the EAIS using a new coupled global climate (GCM)–dynamic ice sheet model (DeConto and Pollard, 2003b), as well as data from recent drilling around the margin covering time period from Cretaceous to the present. A second special issue on the same theme (Florindo et al., 2005) also featured a mix of modelling and data papers with a focus on the Eocene–Oligocene boundary and the initiation of ice sheet growth, including a pioneering attempt to evaluate the relative influence of fluvial versus glacial processes in shaping the landscape of the Prydz Bay sector of Antarctica (Jamieson et al., 2005). The remainder of the issue comprised further papers on seismic stratigraphy and reports from drilling around the margin. The papers to be found in this special issue, like the previous two, maintain the mix of modelling- and data-oriented papers that reflect the range of this research.

Palaeogeography, Palaeoclimatology, Palaeoecology↗

Evolution of the conceptual model of unsaturated zone hydrology at Yucca Mountain, Nevada

Yucca Mountain is an arid site proposed for consideration as the United States’ first underground high-level radioactive waste repository. Low rainfall (approximately 170 mm/yr) and a thick unsaturated zone (500–1000 m) are important physical attributes of the site because the quantity of water likely to reach the waste and the paths and rates of movement of the water to the saturated zone under future climates would be major factors in controlling the concentrations and times of arrival of radionuclides at the surrounding accessible environment. The framework for understanding the hydrologic processes that occur at this site and that control how quickly water will penetrate through the unsaturated zone to the water table has evolved during the past 15 yr. Early conceptual models assumed that very small volumes of water infiltrated into the bedrock (0.5–4.5 mm/yr, or 2–3 percent of rainfall), that much of the infiltrated water flowed laterally within the upper nonwelded units because of capillary barrier effects, and that the remaining water flowed down faults with a small amount flowing through the matrix of the lower welded, fractured rocks. It was believed that the matrix had to be saturated for fractures to flow. However, accumulating evidence indicated that infiltration rates were higher than initially estimated, such as infiltration modeling based on neutron borehole data, bomb-pulse isotopes deep in the mountain, perched water analyses and thermal analyses. Mechanisms supporting lateral diversion did not apply at these higher fluxes, and the flux calculated in the lower welded unit exceeded the conductivity of the matrix, implying vertical flow of water in the high permeability fractures of the potential repository host rock, and disequilibrium between matrix and fracture water potentials. The development of numerical modeling methods and parameter values evolved concurrently with the conceptual model in order to account for the observed field data, particularly fracture flow deep in the unsaturated zone. This paper presents the history of the evolution of conceptual models of hydrology and numerical models of unsaturated zone flow at Yucca Mountain, Nevada (Flint, A.L., Flint, L.E., Kwicklis, E.M., Bodvarsson, G.S., Fabryka-Martin, J.M., 2001. Hydrology of Yucca Mountain. Reviews of Geophysics in press). This retrospective is the basis for recommendations for optimizing the efficiency with which a viable and robust conceptual model can be developed for a complex site.

Nevada↗

Chandeleur Islands to Breton Island bathymetric and topographic datasets and operational sediment budget development: Methodology and analysis report

This study is part of the Coastal Protection and Restoration Authority (CPRA) Louisiana Barrier Island Comprehensive Monitoring (BICM) program. The goal of the BICM program is to provide long-term data on the barrier islands of Louisiana for monitoring change and assisting in coastal management. The BICM program uses historical data and acquires new data to map and monitor shoreline position, sediment properties, topography, bathymetry, and habitat. Since 2006, the U.S. Geological Survey (USGS) has collected geophysical and sedimentologic data across the Breton National Wildlife Refuge (BNWR) through the BICM program and collaborative USGS projects such as the Barrier Island Evolution Research project (under CPRA contract number 2000339324, BICM2–Chandeleurs TopoBathy DEM), which builds upon the previous BICM physical assessment of the BNWR outlined in a separate report. This project uses topographic and bathymetric data from three periods (1917–1922, 2006–2007, and 2013–2015) to develop digital elevation models (DEMs), measure elevation change, and calculate sediment budgets for the barrier island system. The sediment budget analysis, derived from the volumetric change between the three periods, is necessary for understanding sediment transport dynamics along barrier islands and providing information for effective coastal management. This report describes the methods used to acquire, process, and produce these products.

Louisiana↗

Testing the potential role of brine reflux in the formation of sedimentary exhalative (Sedex) ore deposits

Sedimentary exhalative (sedex) ore deposits are the world’s largest Zn-Pb deposits. While the geologic processes that formed these deposits are generally well understood, the fundamental hydrologic processes that drove these massive hydrothermal systems remain an area of debate. We use numerical modeling to test an emerging hypothesis, supported by recent ore genesis research and sedex basin analysis, that brine reflux flow systems produced and drove the fluids that formed sedex deposits. A previous numerical model of brine reflux, developed to study dolomitization, is adapted to a sedimentary basin with geologic features essential for sedex formation. We simulate the flow of evaporated brines through the basin and the evolution of salinity, temperature, and flow rates, and find that modeled values for these parameters for brines discharging to the seafloor exceed previously established physiochemical thresholds for ore formation (>170 g/L, >80°C, and total discharge volumes >107 m3 per meter perpendicular to the 2D model section). Sensitivity testing of this modest-sized basin highlights the large effect that aspects of the hydrogeologic framework can have on mineralizing potential of the reflux brines. Finally, modeling alternating periods of active and inactive evaporation produces pulsed brine reflux systems capable of producing multiple deposits of different age as observed in many sedex basins. The modeling thus supports the hypothesis that seawater evaporation on the basin margin significantly inboard of sedex deposits may be responsible for their formation. Sensitivity testing suggests that numerical models with more detailed, basin-specific geologic frameworks might be useful for assessing the mineral potential of sedimentary basins.

Ore Geology Reviews↗

A rain splash transport equation assimilating field and laboratory measurements

Process-based models of hillslope evolution require transport equations relating sediment flux to its major controls. An equation for rain splash transport in the absence of overland flow was constructed by modifying an approach developed by Reeve (1982) and parameterizing it with measurements from single-drop laboratory experiments and simulated rainfall on a grassland in East Africa. The equation relates rain splash to hillslope gradient, the median raindrop diameter of a storm, and ground cover density; the effect of soil texture on detachability can be incorporated from other published results. The spatial and temporal applicability of such an equation for rain splash transport in the absence of overland flow on uncultivated hillslopes can be estimated from hydrological calculations. The predicted transport is lower than landscape-averaged geologic erosion rates from Kenya but is large enough to modify short, slowly eroding natural hillslopes as well as microtopographic interrill surfaces between which overland flow transports the mobilized sediment. Copyright 2010 by the American Geophysical Union. Copyright 2010 by the American Geophysical Union.

Journal of Geophysical Research F: Earth Surface↗

Perspectives on the future of ecology, evolution, and biodiversity from the Council on Microbial Sciences of the American Society for Microbiology

The field of microbial ecology, evolution, and biodiversity (EEB) is at the leading edge of understanding how microbes shape our biosphere and influence the well-being of humankind. To that end, EEB is developing new tools to analyze the massive, complex, transdisciplinary datasets that result from such studies. The American Society for Microbiology’s Council on Microbial Sciences hosted a virtual retreat in 2023 to identify the trajectory of EEB both within the Society and microbiology at large. Retreat presentations and discussions collectively emphasized the interconnectedness of microbes and their outsized global influence on environmental and host health. The retreat repeatedly emphasized that the future of science is through transdisciplinary collaborations that promote integration of diverse datasets and advanced technologies, while also genuinely fostering inclusivity, global collaborations, and public engagement. The American Society for Microbiology and EEB stand poised to lead a paradigm shift that will result in a new era of collaboration, innovation, and societal relevance for microbiology.

mSphere↗

2014-2015 Partnership accomplishments report on joint activities: National Gap Analysis Program and LANDFIRE

The intended target audience for this document initially is management and project technical specialist and scientists involved in the Gap Analysis Program (GAP) and the Landscape Fire and Resource Management Planning Tools - (LANDFIRE) program to help communicate coordination activities to all involved parties. This document is also intended to give background information in other parts of the USGS and beyond, although some details given are relatively oriented to management of the respective programs. Because the Gap Analysis Program (GAP) and the Landscape Fire and Resource Management Planning Tools - LANDFIRE programs both rely on characterizations of land cover using similar scales and resolutions, the programs have been coordinating their work to improve scientific consistency and efficiency of production. Initial discussions and informal sharing of ideas and work began in 2008. Although this collaboration was fruitful, there was no formal process for reporting results, plans, or outstanding issues, nor was there any formally-defined coordinated management team that spanned the two programs. In 2012, leadership from the two programs agreed to strengthen the coordination of their respective work efforts. In 2013 the GAP and LANDFIRE programs developed an umbrella plan of objectives and components related to three mutual focus areas for the GAP and LANDFIRE collaboration for the years 2013 and 2014 (GAP/LANDFIRE 2013). The evolution of this partnership resulted in the drafting of an inter-program Memorandum of Understanding (MOU) in 2014. This MOU identified three coordination topics relevant to the two programs participating at this point in the MOU history: Vegetation mapping Disturbance classes Formal quality assessment

Report↗

The morphology and evolution of the Stromboli 2002-2003 lava flow field--An example of a basaltic flow field emplaced on a steep slope

The use of a hand-held thermal camera during the 2002–2003 Stromboli effusive eruption proved essential in tracking the development of flow field structures and in measuring related eruption parameters, such as the number of active vents and flow lengths. The steep underlying slope on which the flow field was emplaced resulted in a characteristic flow field morphology. This comprised a proximal shield, where flow stacking and inflation caused piling up of lava on the relatively flat ground of the vent zone, that fed a medial–distal lava flow field. This zone was characterized by the formation of lava tubes and tumuli forming a complex network of tumuli and flows linked by tubes. Most of the flow field was emplaced on extremely steep slopes and this had two effects. It caused flows to slide, as well as flow, and flow fronts to fail frequently, persistent flow front crumbling resulted in the production of an extensive debris field. Channel-fed flows were also characterized by development of excavated debris levees in this zone (Calvari et al. 2005). Collapse of lava flow fronts and inflation of the upper proximal lava shield made volume calculation very difficult. Comparison of the final field volume with that expecta by integrating the lava effusion rates through time suggests a loss of ~70% erupted lava by flow front crumbling and accumulation as debris flows below sea level. Derived relationships between effusion rate, flow length, and number of active vents showed systematic and correlated variations with time where spreading of volume between numerous flows caused an otherwise good correlation between effusion rate, flow length to break down. Observations collected during this eruption are useful in helping to understand lava flow processes on steep slopes, as well as in interpreting old lava–debris sequences found in other steep-sided volcanoes subject to effusive activity.

Stromboli, Sicily, Tyrrhenian Sea↗

A new tool for studying waterfowl immune and metabolic responses: Molecular level analysis using kinome profiling

Here, we describe the design of an Anas‐ specific kinome peptide array that can be used to study the immunometabolic responses of mallard and American black duck to pathogens, contaminants, and environmental stress. The peptide arrays contain 2,642 unique phosphorylate‐able peptide sequences representing 1,900 proteins. These proteins cover a wide array of metabolic and immunological processes, and 758 Gene Ontology Biological processes are statistically significantly represented on the duck peptide array of those 164 contain the term “metabolic” and 25 “immune.” In addition, we conducted a comparison of mallard to American black duck at a genetic and proteomic level. Our results show a significant genomic and proteomic overlap between these two duck species, so that we have designed a cross‐reactive peptide array capable of studying both species. This is the first reported development of a wildlife species‐specific kinome peptide array.

Ecology and Evolution↗

Geologic map and digital database of the Redlands 7.5' quadrangle, San Bernardino and Riverside Counties, California

This geologic database of the Redlands 7.5' quadrangle was prepared by the Southern California Areal Mapping Project (SCAMP), a regional geologic-mapping project sponsored jointly by the U.S. Geological Survey and the California Geological Survey. The database was developed as a contribution to the National Cooperative Geologic Mapping Program's National Geologic Map Database, and is intended to provide a general geologic setting of the Redlands quadrangle. The database and map provide information about earth materials and geologic structures, including faults and folds that have developed in the quadrangle due to complexities in the San Andreas Fault system. The Redlands 7.5' quadrangle contains earth materials and structures that provide insight into the late Cenozoic geologic evolution of the southern California Inland Empire region. Important stratigraphic and structural elements include (1) the modern trace of the San Andreas and San Jacinto faults and (2) late Tertiary and Quaternary sedimentary materials and geologic structures that formed during the last million years or so and that record complex geologic interactions within the San Andreas Fault system. These materials and the structures that deform them provide the geologic framework for investigations of earthquake hazards and ground-water recharge and subsurface flow. Geologic information contained in the Redlands database is general-purpose data that is applicable to land-related investigations in the earth and biological sciences. The term "general-purpose" means that all geologic-feature classes have minimal information content adequate to characterize their general geologic characteristics and to interpret their general geologic history. However, no single feature class has enough information to definitively characterize its properties and origin. For this reason the database cannot be used for site-specific geologic evaluations, although it can be used to plan and guide investigations at the site-specific level. This summary pamphlet discusses major categories of surficial materials in the Redlands quadrangle, and provides a conceptual framework and basis for how geologicmap units containing such materials are recognized and correlated.

California↗

Flow paths in the Edwards aquifer, northern Medina and northeastern Uvalde Counties, Texas, based on hydrologic identification and geochemical characterization and simulation

The U.S. Geological Survey, in cooperation with the San Antonio Water System, conducted a 4-year study during 2001– 04 to identify major ground-water flow paths in the Edwards aquifer in northern Medina and northeastern Uvalde Counties, Texas. The study involved use of geologic structure, surfacewater and ground-water data, and geochemistry to identify ground-water flow paths. Relay ramps and associated faulting in northern Medina County appear to channel ground-water flow along four distinct flow paths that move water toward the southwest. The northwestern Medina flow path is bounded on the north by the Woodard Cave fault and on the south by the Parkers Creek fault. Water moves downdip toward the southwest until the flow encounters a cross fault along Seco Creek. This barrier to flow might force part or most of the flow to the south. Departure hydrographs for two wells and discharge departure for a streamflow-gaging station provide evidence for flow in the northwestern Medina flow path. The north-central Medina flow path (northern part) is bounded by the Parkers Creek fault on the north and the Medina Lake fault on the south. The adjacent north-central Medina flow path (southern part) is bounded on the north by the Medina Lake fault and on the south by the Diversion Lake fault. The north-central Medina flow path is separated into a northern and southern part because of water-level differences. Ground water in both parts of the northcentral Medina flow path moves downgradient (and down relay ramp) from eastern Medina County toward the southwest. The north-central Medina flow path is hypothesized to turn south in the vicinity of Seco Creek as it begins to be influenced by structural features. Departure hydrographs for four wells and Medina Lake and discharge departure for a streamflow-gaging station provide evidence for flow in the north-central Medina flow path. The south-central Medina flow path is bounded on the north by the Seco Creek and Diversion Lake faults and on the south by the Haby Crossing fault. Because of bounding faults oriented northeast-southwest and adjacent flow paths directed south by other geologic structures, the south-central Medina flow path follows the configuration of the adjacent flow paths—oriented initially southwest and then south. Immediately after turning south, the south-central Medina flow path turns sharply east. Departure hydrographs for four wells and discharge departure for a streamflow-gaging station provide evidence for flow in the south-central Medina flow path. Statistical correlations between water-level departures for 11 continuously monitored wells provide additional evidence for the hypothesized flow paths. Of the 55 combinations of departure dataset pairs, the stronger correlations (those greater than .6) are all among wells in the same flow path, with one exception. Simulations of compositional differences in water chemistry along a hypothesized flow path in the Edwards aquifer and between ground-water and surface-water systems near Medina Lake were developed using the geochemical model PHREEQC. Ground-water chemistry for samples from five wells in the Edwards aquifer in the northwestern Medina flow path were used to evaluate the evolution of ground-water chemistry in the northwestern Medina flow path. Seven simulations were done for samples from pairs of these wells collected during 2001–03; three of the seven yielded plausible models. Ground-water samples from 13 wells were used to evaluate the evolution of ground-water chemistry in the north-central Medina flow path (northern and southern parts). Five of the wells in the most upgradient part of the flow path were completed in the Trinity aquifer; the remaining eight were completed in the Edwards aquifer. Nineteen simulations were done for samples from well pairs collected during 1995–2003; eight of the 19 yielded plausible models. Ground-water samples from seven wells were used to evaluate the evolution of ground-water chemistry in the south-central Medina flow path. One well was the Trinity aquifer end-member well upgradient from all flow paths, and another was a Trinity aquifer well in the most upgradient part of the flow path; all other wells were completed in the Edwards aquifer. Nine simulations were done for samples from well pairs collected during 1996–2003; seven of the nine yielded plausible models. The plausible models demonstrate that the four hypothesized flow paths can be partially supported geochemically.

Texas↗

Digital-image processing and image analysis of glacier ice

This document provides a methodology for extracting grain statistics from 8-bit color and grayscale images of thin sections of glacier ice—a subset of physical properties measurements typically performed on ice cores. This type of analysis is most commonly used to characterize the evolution of ice-crystal size, shape, and intercrystalline spatial relations within a large body of ice sampled by deep ice-coring projects from which paleoclimate records will be developed. However, such information is equally useful for investigating the stress state and physical responses of ice to stresses within a glacier. The methods of analysis presented here go hand-in-hand with the analysis of ice fabrics (aggregate crystal orientations) and, when combined with fabric analysis, provide a powerful method for investigating the dynamic recrystallization and deformation behaviors of bodies of ice in motion. The procedures described in this document compose a step-by-step handbook for a specific image acquisition and data reduction system built in support of U.S. Geological Survey ice analysis projects, but the general methodology can be used with any combination of image processing and analysis software. The specific approaches in this document use the FoveaPro 4 plug-in toolset to Adobe Photoshop CS5 Extended but it can be carried out equally well, though somewhat less conveniently, with software such as the image processing toolbox in MATLAB, Image-Pro Plus, or ImageJ.

Techniques and Methods↗

The Hurricane-flood-landslide continuum-forecasting Hurricane effects at landfall

The integration of remote-sensing and in-situ observations, and assimilation of these observations into high-resolution mesoscale models was described. It was observed that the greatest loss of life and property is the direct result of the storm because of the high winds and heavy rain. The research were conducted to develop a warning system that included satellite observations to track dangerous level of precipitation and hurricane. The focus of the continuum project was to improve the ability to predict the evolution of the Earth system.

Conference Paper↗

Early Miocene volcanic rocks and associated tectonics, Lava Hills and southern Bristol Mountains, California

Volcanic rocks of latest Oligocene to early Miocene age form an east-west belt across part of the central eastern Mojave Desert from the Whipple Mountains on the east to the Rosamond Hills on the west. We term this the central belt because it is separated from northern and southern belts by swaths with no volcanic rocks. Limited geochronologic data indicate that much of the belt is latest Oligocene and early Miocene in age, about 24 to 19 Ma, a finding that is consistent with these rocks being overlain by the 18.8 Ma Peach Spring Tuff in many places. We describe Miocene geology in a central area of the belt, in the Lava Hills, southern Bristol Mountains, and southern Old Dad Mountains. Sedimentary basins formed coeval with early andesite to rhyolite volcanism, progressing from fluvial and lacustrine tuffaceous sandstone to volcanic lavas, tuffs, and breccias, indicating that early basins formed proximal to volcanic edifices. Higher strata are fluvial and lacustrine with lavas punctuating the sequence. Although basins may partly have been formed within topographic lows bounded by volcanic domes, plateaus, and stratovolcanoes, consistent stratigraphic sections over wide areas indicate that tectonic basin evolution affected broad areas. The volcanic section is capped by local basalt flows and the regional Peach Spring Tuff. Limited data on normal faults support interpretations of early extensional basin development caused by northeast-southwest oriented stretching. Later extension caused stratal rotations, tilting early deposits down to the southwest. This tilted and subsequently beveled basin architecture was overlain by the youngest volcanic deposits, primarily rhyolite and basalt. The Peach Spring Tuff, 18.8 Ma, lies within this upper unit. Similar stratigraphic and structural relations are exposed in the nearby Marble Mountains and Van Winkle Mountain sections, reinforcing that a broad area underwent similar volcanism and tectonism. In our study area the upper unit is only very gently tilted except near dextral strike-slip faults of the eastern California shear zone. These late Miocene to Recent faults are represented as four main fault zones spaced about 5 km apart, representing distributed shear north of the Bristol Lake basin.

California↗

Relating systematic compositional variability to the textural occurrence of solid bitumen in shales

This study presents Raman spectroscopic data paired with scanning electron microscopy (SEM) images to assess solid bitumen composition as a function of solid bitumen texture and association with minerals. A series of hydrous pyrolysis experiments (1–103 days, 300–370 °C) using a low maturity (0.25% solid bitumen reflectance, BR o ), high total organic carbon [(TOC), 14.0 wt%] New Albany Shale sample as the starting material yielded pyrolysis residues designed to evaluate the evolution of solid bitumen aromaticity with increasing temperature and heating duration. Solid bitumen was analyzed by Raman spectroscopy wherein point data were collected from accumulations that ranged in size and degree of association with the mineral matrix. Raman spectroscopy results show that with increasing temperature and experimental duration, solid bitumen aromaticity increases and compositional variability decreases. With regards to texture and composition, coarser-grained solid bitumen (>1.3 μm from nearest mineral grain) has consistently higher, but less variable aromaticity than thinner, wispy solid bitumen which is more intimately associated with the mineral matrix. Collocated scanning electron microscope images were used to provide qualitative assessments of porosity hosted by the organic matter. These paired data sets suggest that solid bitumen porosity development and molecular composition are linked, and these parameters are related to the textural relationships of the organic matter within the whole rock. These results are discussed with perspective towards understanding how rock fabric and texture can influence organic matter evolution during thermal maturation of organic-rich marine shales and inform our broader understanding of these important energy resources.

International Journal of Coal Geology↗

Modeling the impacts of sand placement strategies on barrier island evolution in a semi-enclosed bay system

This study assesses the impacts of five proposed restoration actions at Little Dauphin Island, a low-lying relic spit in a semi-enclosed bay system on the Alabama coast. A Delft3D model is developed to simulate annual scale (five-year) sediment transport and resulting bed level changes. The model is validated with observed water level and wave data, as well as sediment tracers that were deployed offshore of the island. An XBeach model is developed to simulate storm-driven morphologic change and is validated for hurricanes Ivan (2004), Katrina (2005)and Sally (2020). Together, the models are used to assess differences in the island's morphological response under a no-action (status quo) scenario representing a continuous island, tidal inlet realignment, a sand motor nourishment, beach and dune restoration and a dredged offshore borrow area. The no-action scenario revealed that the island breached at multiple locations including the location of the proposed inlet realignment during each storm. The realigned channel did not prevent breaching on the island, but reduced the magnitude of sand transported through the breaches. The sand motor provided some sheltering to leeward shorelines during storms but did not prevent breaching from occurring elsewhere. Fairweather waves and currents were not strong enough to transport sand outside of the vicinity of the feature to feed adjacent shorelines as intended. The beach and dune restoration reduced storm-driven overtopping along the nourished shoreline. For habitat purposes, strategically placed bayous provided low elevation points that allowed overwash depending on the direction of cross-barrier water level gradients.

Alabama↗

Ocean-atmosphere dynamics during Hurricane Ida and Nor'Ida: An application of the coupled ocean-;atmosphere–wave–sediment transport (COAWST) modeling system

The coupled ocean–atmosphere–wave–sediment transport (COAWST) modeling system was used to investigate atmosphere–ocean–wave interactions in November 2009 during Hurricane Ida and its subsequent evolution to Nor'Ida, which was one of the most costly storm systems of the past two decades. One interesting aspect of this event is that it included two unique atmospheric extreme conditions, a hurricane and a nor'easter storm, which developed in regions with different oceanographic characteristics. Our modeled results were compared with several data sources, including GOES satellite infrared data, JASON-1 and JASON-2 altimeter data, CODAR measurements, and wave and tidal information from the National Data Buoy Center (NDBC) and the National Tidal Database. By performing a series of numerical runs, we were able to isolate the effect of the interaction terms between the atmosphere (modeled with Weather Research and Forecasting, the WRF model), the ocean (modeled with Regional Ocean Modeling System (ROMS)), and the wave propagation and generation model (modeled with Simulating Waves Nearshore (SWAN)). Special attention was given to the role of the ocean surface roughness. Three different ocean roughness closure models were analyzed: DGHQ (which is based on wave age), TY2001 (which is based on wave steepness), and OOST (which considers both the effects of wave age and steepness). Including the ocean roughness in the atmospheric module improved the wind intensity estimation and therefore also the wind waves, surface currents, and storm surge amplitude. For example, during the passage of Hurricane Ida through the Gulf of Mexico, the wind speeds were reduced due to wave-induced ocean roughness, resulting in better agreement with the measured winds. During Nor'Ida, including the wave-induced surface roughness changed the form and dimension of the main low pressure cell, affecting the intensity and direction of the winds. The combined wave age- and wave steepness-based parameterization (OOST) provided the best results for wind and wave growth prediction. However, the best agreement between the measured (CODAR) and computed surface currents and storm surge values was obtained with the wave steepness-based roughness parameterization (TY2001), although the differences obtained with respect to DGHQ were not significant. The influence of sea surface temperature (SST) fields on the atmospheric boundary layer dynamics was examined; in particular, we evaluated how the SST affects wind wave generation, surface currents and storm surges. The integrated hydrograph and integrated wave height, parameters that are highly correlated with the storm damage potential, were found to be highly sensitive to the ocean surface roughness parameterization.

Ocean Modelling↗

Assessing biological effects from highway-runoff constituents

Increased emphasis on evaluation of nonpoint-source pollution has intensified the need for techniques that can be used to discern the toxicological effects of complex chemical mixtures. In response, the use of biological assessment techniques is receiving increased regulatory emphasis. When applied with documented habitat assessment and chemical analysis, these techniques can increase our understanding of the influence of environmental contaminants on the biological integrity and ecological function of aquatic communities. The contaminants of greatest potential concern in highway runoff are those that arise from highway construction, maintenance, and use. The major contaminants of interest are deicers; nutrients; metals; petroleum-related organic compounds, such as polycyclic aromatic hydrocarbons (PAHs), benzene, toluene, ethylbenzene, and xylene (BTEX), and methyl tert -butyl ether (MTBE); sediment washed off the road surface; and agricultural chemicals used in highway maintenance. Hundreds, if not thousands, of biological endpoints (measurable responses of living organisms) may be either directly or associatively affected by contaminant exposure. Measurable effects can occur throughout ecosystem processes across the wide range of biological complexity, ranging from responses at the biochemical level to the community level. The challenge to the environmental scientist is to develop an understanding of the relationship of effects at various levels of biological organization in order to determine whether a causal relationship exists between chemical exposure and substantial ecological impairment. This report provides a brief history of the evolution of biological assessment techniques, a description of the major classes of contaminants that are of particular interest in highway runoff, an overview of representative biological assessment techniques, and a discussion of data-quality considerations. Published reports with a focus on the effects of highway runoff on the local ecosystem were reviewed to provide information on (1) the suitability of the existing data for a quantitative national synthesis, (2) the methods available to study the effects of highway runoff on local ecosystems, and (3) the potential for adverse effects on the roadside environment and receiving waters. Although many biological studies have been done, the use of different methods and a general lack of sufficient documentation precludes a quantitative national synthesis on the basis of the existing data. The Federal Highway Administration, the U.S. Environmental Protection Agency, the U.S. Geological Survey, the Intergovernmental Task Force on Monitoring Water Quality, and the National Resources Conservation Service all have developed and documented methods for assessing the effects of contaminants on ecosystems in receiving waters. These published methods can be used to formulate a set of protocols to provide consistent information from highway-runoff studies. Review of the literature indicates (qualitatively) that highway runoff (even from highways with high traffic volume) may not usually be acutely toxic. Tissue analysis and community assessments, however, indicate effects from highway- runoff sediments near discharge points (even from sites near highways with relatively low traffic volumes). At many sites, elevated concentrations of highway-runoff constituents were measured in tissues of species associated with aquatic sediments. Community assessments also indicate decreases in the diversity and productivity of aquatic ecosystems at some sites receiving highway runoff. These results are not definitive, however, and depend on many site-specific criteria that were not sufficiently documented in most of the studies reviewed.

Open-File Report↗