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Forest management under uncertainty for multiple bird population objectives

We advocate adaptive programs of decision making and monitoring for the management of forest birds when responses by populations to management, and particularly management trade-offs among populations, are uncertain. Models are necessary components of adaptive management. Under this approach, uncertainty about the behavior of a managed system is explicitly captured in a set of alternative models. The models generate testable predictions about the response of populations to management, and monitoring data provide the basis for assessing these predictions and informing future management decisions. To illustrate these principles, we examine forest management at the Piedmont National Wildlife Refuge, where management attention is focused on the recovery of the Red-cockaded Woodpecker (Picoides borealis) population. However, managers are also sensitive to the habitat needs of many non-target organisms, including Wood Thrushes (Hylocichla mustelina) and other forest interior Neotropical migratory birds. By simulating several management policies on a set of-alternative forest and bird models, we found a decision policy that maximized a composite response by woodpeckers and Wood Thrushes despite our complete uncertainty regarding system behavior. Furthermore, we used monitoring data to update our measure of belief in each alternative model following one cycle of forest management. This reduction of uncertainty translates into a reallocation of model influence on the choice of optimal decision action at the next decision opportunity.

Book chapter

Simultaneous use of mark-recapture and radiotelemetry to estimate survival, movement, and capture rates

Biologists often estimate separate survival and movement rates from radio-telemetry and mark-recapture data from the same study population. We describe a method for combining these data types in a single model to obtain joint, potentially less biased estimates of survival and movement that use all available data. We furnish an example using wood thrushes ( Hylocichla mustelina ) captured at the Piedmont National Wildlife Refuge in central Georgia in 1996. The model structure allows estimation of survival and capture probabilities, as well as estimation of movements away from and into the study area. In addition, the model structure provides many possibilities for hypothesis testing. Using the combined model structure, we estimated that wood thrush weekly survival was 0.989 ± 0.007 ( ± SE). Survival rates of banded and radio-marked individuals were not different ( α [ S radioed , S banded ] =log[ S radioed / S banded ]=0.0239 ± 0.0435). Fidelity rates (weekly probability of remaining in a stratum) did not differ between geographic strata ( Ψ = 0.911 ± 0.020; α [ Ψ 11 , Ψ 22 ]=0.0161 ± 0.047), and recapture rates ( p = 0.097 ± 0.016) banded and radio-marked individuals were not different ( α [ P radioed , P banded ]=0.145 ± 0.655). Combining these data types in a common model resulted in more precise estimates of movement and recapture rates than separate estimation, but ability to detect stratum or mark-specific differences in parameters was week. We conducted simulation trials to investigate the effects of varying study designs on parameter accuracy and statistical power to detect important differences. Parameter accuracy was high (relative bias [RBIAS] <2 %) and confidence interval coverage close to nominal, except for survival estimates of banded birds for the 'off study area' stratum, which were negatively biased (RBIAS -7 to -15%) when sample sizes were small (5-10 banded or radioed animals 'released' per time interval). To provide adequate data for useful inference from this model, study designs should seek a minimum of 25 animals of each marking type observed (marked or observed via telemetry) in each time period and geographic stratum.

Journal of Wildlife Management

Lipid and water depletion in migrating passerines following passage over the Gulf of Mexico

Lipid depletion is currently believed to be the primary factor limiting flight duration of migrating birds in North America, while the influence of water loss is thought to be small. Three migrating species of passerines, wood thrush ( Hylocichla mustelina ), Swainson's thrush ( Catharus ustulatus ), and summer tanager ( Piranga rubra ) were captured during the 1993 spring migration just after crossing the Gulf of Mexico and examined for lipid and water depletion. The redwinged blackbird ( Agelaius phoeniceus ), a winter resident, was examined for comparison. Although some migrants had low levels of fat, most were not seriously fat-depleted and had much higher lipid levels than red-winged blackbirds. Migrants appeared dehydrated, usually having less than 60% body water and significantly less water than the blackbirds. Recaptured wood thrushes had significantly higher mass than when initially captured. Many of these birds were replenishing significant amounts of water, while the acquisition of lipid mass was dependent on the amount of time the birds spent on the study site. Migrants were significantly fatter but had significantly less water mass when captured during unfavorable weather than under favorable conditions. It appears that both dehydration and lipid depletion are major physiological constraints on migrating passerines.

Louisiana

Overwinter survival of neotropical migratory birds in early-successional and mature tropical forests

Many Neotropical migratory species inhabit both mature and earty-successional forests on their wintering grounds, yet comparisons of survival rates between habitats are lacking. Consequently, the factors affecting habitat suitability for Neotropical migrants and the potential effects of tropical deforestation on migrants are not well understood. We estimated overwinter survival and capture probabilities of Wood Thrush ( Hylochichla mustelina ), Ovenbird ( Seiurus aurocapillus ), Hooded Warbler ( Wilsonia citrina ), and Kentucky Warbler ( Oporornis formosus ) inhabiting two common tropical habitat types, mature and early-successional forest. Our results suggest that large differences (for example, ratio of survival rates (γ) ≤ 0.85) in overwinter survival between these habitats do not exist for any of these species. Age ratios did not differ between habitats, but males were more common in forest habitats and females more common in successional habitats for Hooded Warblers and Kentucky Warblers. Future research on overwinter survival should address the need for age- and sex-specific survival estimates before we can draw strong conclusions regarding winter habitat suitability. Our estimates of overwinter survival extrapolated to annual survival rates that were generally lower than previous estimates of annual survival of migratory birds. Capture probability differed between habitats for Kentucky Warblers, but our results provide strong evidence against large differences in capture probability between habitats for Wood Thrush, Hooded Warblers, and Ovenbirds. We found no temporal or among-site differences in survival or capture probability for any of the four species. Additional research is needed to examine the effects of winter habitat use on survival during migration and between-winter survival.

Conservation Biology

Survey protocols drive heterogeneity in occupancy estimates that cannot be standardized using post hoc analyses

Site occupancy models are widely used to estimate species distributions from presence–nondetection data, yet for mobile animals, the true proportion of sites occupied varies in time. Thus, true occupancy and estimates generated from different protocols are affected by temporal characteristics of survey design. Here we tested whether we could standardize occupancy estimates across different sampling protocols with a post hoc statistical test. Using an individual-based movement model of Wood Thrush ( Hylocichla mustelina ), we simulated point count surveys across 3000 populations under 90 spatially and temporally variable sampling protocols. For each simulation, we fit a standard occupancy model, then used minute-level detections to truncate surveys and generate occupancy estimates across increasing survey lengths. We fit asymptotic models to these series to estimate intercepts (instantaneous occupancy) and asymptotes (longer-term occupancy) and evaluated how well they approximated true instantaneous, daily and seasonal occupancy. We were unable to recover instantaneous or seasonal occupancy from any approach. Both standard occupancy models and asymptotic regression (the top-performing asymptotic model) most closely approximated daily occupancy; although asymptotic regression produced slightly less biased estimates, it showed substantially greater variability, resulting in greater overall error. Our results show that post hoc analytical approaches cannot, at present, reliably standardize occupancy estimates across heterogeneous survey designs. Instead, ensuring biologically informative and comparable estimates will depend on standardized survey protocols. Practical implication : Monitoring programs using presence–nondetection data should prioritize consistent survey protocols when estimating occupancy for mobile species, with a focus on daily occupancy as the most attainable and useful metric. Although the highest accuracy and precision were achieved under the most intensive survey protocols, for point counts of Wood Thrush and similar species, four consecutive 15–20 min surveys provide near-optimal precision and can be completed in a single visit, making them well suited for estimating relative occupancy under logistical constraints. Three 20-min surveys spaced ~24 h apart closely approximate daily occupancy while maintaining reasonable precision. Developing similar protocols for other species and survey methods will be critical to ensuring comparable occupancy estimates across space and time.

Ecological Solutions and Evidence

Evaluating the ability of regional models to predict local avian abundance

Spatial modeling over broad scales can potentially direct conservation efforts to areas with high species-specific abundances. We examined the performance of regional models for predicting bird abundance at spatial scales typically addressed in conservation planning. Specifically, we used point count data on wood thrush (Hylocichla mustelina) and blue-winged warbler (Vermivora cyanoptera) from 2 time periods (1995-1998 and 2006-2007) to evaluate the ability of regional models derived via Bayesian hierarchical techniques to predict bird abundance. We developed models for each species within Bird Conservation Region (BCR) 23 in the upper midwestern United States at 800-ha, 8,000-ha, and approximately 80,000-ha scales. We obtained count data from the Breeding Bird Survey and land cover data from the National Land Cover Dataset (1992). We evaluated predictions from the best models, as defined by an information-theoretic criterion, using point count data collected within an ecological subregion of BCR 23 at 131 count stations in the 1990s and again in 2006-2007. Competing (Deviance Information Criteria <5) blue-winged warbler models accounted for 67% of the variability and suggested positive associations with forest edge and proportion of forest at the 8,000-ha scale, and negative associations with forest patch area (800 ha) and wetness (800 ha and 80,000 ha). The regional model performed best for blue-winged warbler predicted abundances from point counts conducted in Iowa during 1995-1996 ( r s = 0.57; P = 0.14), the survey period that most closely aligned with the time period of data used for regional model construction. Wood thrush models exhibited positive correlations with point count data for all survey areas and years combined ( r s = 0.58, P &le; 0.001). In comparison, blue-winged warbler models performed worse as time increased between the point count surveys and vintage of the model building data ( r s = 0.03, P = 0.92 for Iowa and r s = 0.13, P = 0.51 for all areas, 2006-2007), likely related to the ephemeral nature of their preferred early successional habitat. Species abundance and sensitivity to changing habitat conditions seems to be an important factor in determining the predictive ability of regional models. Hierarchical models can be a useful tool for concentrating efforts at the scale of management units and should be one of many tools used by land managers, but we caution that the utility of such models may decrease over time for species preferring relatively ephemeral habitats if model inputs are not updated accordingly.

Journal of Wildlife Management

Occurrence of quiescence in free-ranging migratory songbirds

Quiescence is a period of inactivity that occurs before the onset of migratory activity in nocturnally migrating birds. This behavior has been observed in captive birds in migratory disposition, but its occurrence in free-ranging migratory birds has been documented only anecdotally, and causal factors and function(s), if any, are unknown. In this study, we documented and characterized quiescence in three migratory songbird species (red-eyed vireo [ Vireo olivaceus ], Swainson’s thrush [ Catharus ustulatus ], and wood thrush [ Hylocichla mustelina ]) by measuring movement and proportion of time spent inactive prior to departure from a stopover site during fall migration. Individuals of each species displayed a period of inactivity prior to departure which varied from less than 30 min to over 90 min with red-eyed vireos engaged in the longest, most pronounced quiescence. We also examined how quiescence was related to intrinsic and extrinsic factors known to influence the departure of migrating birds, and found some evidence for an effect of age and departure time but no effect of a migrant’s energetic condition, departure direction, atmospheric conditions around departure, or day of year on quiescence. Our novel application of an automated radiotelemetry system yielded a large amount of data to characterize quiescence in free-ranging migratory birds, and we provide guidance for future studies to tease apart the various causal factors and function(s) of this migratory behavior.

Behavioral Ecology and Sociobiology

Using automated radio telemetry to quantify activity patterns of songbirds during stopover

During migration, birds require stopover habitat to rest and refuel before resuming flight. While long-distance migratory flights represent a large energy investment, stopover accounts for roughly two-thirds of a bird's total energy expenditure during migration. Therefore, birds should minimize energy expenditure while also minimizing time and predation risk during stopover. To understand activity during migration, we recorded activity patterns (i.e. fine-scale movements associated with a range of behaviors) of 3 species, Red-eyed Vireo ( Vireo olivaceus ), Swainson's Thrush ( Catharus ustulatus ), and Wood Thrush ( Hylocichla mustelina ), at a stopover site along the northern coast of the Gulf of Mexico during autumn migration using automated radio telemetry. We found Red-eyed Vireos to be the most active and Swainson's Thrushes the least active. For each species, we used boosted regression trees to investigate associations between activity and factors known to influence bird behavior during stopover. While species differed, day of year and temperature were important predictors of activity for all species. Vireos were active early in the season, under light winds and warmer temperatures, and on evenings when winds were more favorable. Thrushes were more active as the season progressed and when temperatures were cooler. Thrush activity also differed between years, although thrushes increased activity later in the season during all years. Our results illustrate automated radio telemetry as a unique and valuable tool for understanding fine-scale behaviors of birds during stopover.

Alabama

Atlantic Flyway review: Region V: Laurel, Prince Georges County, MD (390-0765)

Nets were operated at this suburban backyard station before and after work during the week, and all day on as many weekends as possible, from 23 August to 30 November. A trip to Spain interrupted banding in mid-September and accounted for the drop in both species and individuals banded. This also explains the 66% drop in Gray Catbirds, which was by far my most common species last year. As in past years, no netting was done within 15 m of the bird feeders, and no traps were baited until the nets were removed in December. White-throated Sparrows (9) and Carolina Chickadees (7) accounted for half of my returns. The oldest returns were a 6-year-old White-throated Sparrow and a 7-year-old Carolina Chickadee. The only species banded in unusually large numbers were American Robin and Black-throated Blue Warbler. A Red-shouldered Hawk and a Golden-winged Warbler raised the species total for this station to 112. Three birds remained here long enough to increase their weight by more than 30%: an HY female Black-and-white Warbler arrived on 29 August with a weight of 11.2 g and was last captured on 5 September with a weight of 17.1 g. It took an HY Ovenbird 24 days to increase from 20.8 g to the 28.2 g that it weighed when last caught on 13 October. A Swainson's Thrush, on the other hand, went from 36.5 g to 48.1 g between 10 and 14 October. Other heavy-weights were Hairy Woodpecker, 74.4 g; Blue Jay, 103.2 g; Gray Catbird, 46.4 g; Wood Thrush, 64.1 g; and White-eyed Vireo, 15.0 g.

Maryland

Landscape capability models as a tool to predict fine-scale forest bird occupancy and abundance

Context Species-specific models of landscape capability (LC) can inform landscape conservation design. Landscape capability is “the ability of the landscape to provide the environment […] and the local resources […] needed for survival and reproduction […] in sufficient quantity, quality and accessibility to meet the life history requirements of individuals and local populations.” Landscape capability incorporates species’ life histories, ecologies, and distributions to model habitat for current and future landscapes and climates as a proactive strategy for conservation planning. Objectives We tested the ability of a set of LC models to explain variation in point occupancy and abundance for seven bird species representative of spruce-fir, mixed conifer-hardwood, and riparian and wooded wetland macrohabitats. Methods We compiled point count data sets used for biological inventory, species monitoring, and field studies across the northeastern United States to create an independent validation data set. Our validation explicitly accounted for underestimation in validation data using joint distance and time removal sampling. Results Blackpoll warbler ( Setophaga striata ), wood thrush ( Hylocichla mustelina ), and Louisiana ( Parkesia motacilla ) and northern waterthrush ( P. noveboracensis ) models were validated as predicting variation in abundance, although this varied from not biologically meaningful (1%) to strongly meaningful (59%). We verified all seven species models [including ovenbird ( Seiurus aurocapilla ), blackburnian ( Setophaga fusca ) and cerulean warbler ( Setophaga cerulea )], as all were positively related to occupancy data. Conclusions LC models represent a useful tool for conservation planning owing to their predictive ability over a regional extent. As improved remote-sensed data become available, LC layers are updated, which will improve predictions.

Landscape Ecology

Impact of forest type and management strategy on avian densities in the Mississippi Alluvial Valley, USA

Avian territory densities were determined from 20 Breeding Bird Censuses in mature (>30 years) bottomland hardwood stand: and 18 Breeding Bird Censuses in young (6-9 years old) cottonwood (Populas deltoides) plantations in the Mississippi Alluvial Valley. Avian species richness, diversity, and territory density were greater (p < 0.01) in bottomland hardwood stands than in intensively-managed cottonwood stands but these parameters were not impacted by selective timber harvest within bottomland hardwood stands nor by method of regeneration within cottonwood plantations (p > 0.05). Even so, detrended correspondence analysis based on avian territory densities readily segregated forest types and silvicultural treatments. Timber harvest within bottomland hardwood stands resulted in a shift in bird communities toward those found in cottonwood stands by increasing the densities of early-successional species such as Indigo Bunting (Passerina cyanea), Yellow-breasted Chat (Icteria virens), and Common Yellowthroat (Geothlypis trichas). Conversely, regenerating cottonwood stands from root sprouts, rather than planting stem cuttings, resulted in a shift in bird communities toward those found in bottomland hardwood stands by increasing densities of species such as White-eyed Vireo (Vireo griseus) and Wood Thrush (Hylocichla mustelina). Tree species diversity, angular canopy cover, and midstory density were positively associated with bird species assemblages in bottomland hardwood stands, whereas vegetation density at ground level was positively associated with bird communities in cottonwood plantations. Conversion of agricultural fields to short-rotation cottonwood plantations results in increased breeding bird populations by adding up to 140 additional territories 40 ha-1. Even so, relative conservation values, derive, from indicator species analysis and Partners in Flight concern scores, suggest that mature bottomland hardwood forests are twice as 'valuable' for bird conservation as are cottonwood plantations.

Forest Ecology and Management

Parasitism at the landscape scale: Cowbirds prefer forests

Landscape-scale examination of parasitism patterns of Brown-headed Cowbirds ( Molothrus ater ) revealed heterogeneous parasitism rates across the mosaic of a forest and associated old-field communities. In a two year study in Dutchess County, New York, we found a significantly higher parasitism rate in the forest-interior community ( n = 301 nests; 17 species) than on the species in the adjacent and nearby old field and edge ( n = 328 nests; 15 species; 32.3% versus 6.5%; p < 0.0001). Cowbirds invaded a mature 1300-ha forest stand even when their traditional host species were available in adjacent old-field and edge habitats. The forest and old-field study areas were located in a 38,000-ha township with 55% forest cover and contained numerous agriculture, dairy, and horse farms that provided favorable habitat for cowbirds. Within-forest examination of parasitism patterns revealed four aspects of cowbird parasitism that contrasted with patterns described in other regions: (1) parasitism was concentrated significantly more often on ground- and low-nesting (nests ≤ 1 m) forest species than on medium- and high-nesting species (nests> 1 m; 35.01% versus 29.93%; p = 0.0393); (2) parasitism was not significantly greater on Neotropical migrant species than on short-distance migrants and residents; (3) the parasitism rate was not higher in nests close to edges; and (4) the parasitism level was low on certain forest species (such as Wood Thrush) that have experienced high parasitism levels in the Midwest. From a management perspective these data suggest that cowbirds exhibit regional differences in host and habitat use; the target host community of a particular cowbird population is unpredictable at the landscape scale; and a landscape scale should be used in designing cowbird studies to accurately assess local population dynamics.

New York

Use of lice to identify cowbird hosts

The host specificity of avian lice ( Phthiraptera ) may be utilized by biologists to investigate the brood parasitism patterns of Brown-headed Cowbirds ( Molothrus ater ). As nestlings, brood parasites have a unique opportunity to encounter lice that are typically host specific. Lice are permanent hemimetabolic ectoparasites, a group found strictly on the body of the host, and they are transferred almost exclusively by bodily contact between hosts during care of young and at copulation. We investigated whether cowbird nestlings become infested with avian lice from their host parents and carry these lice away when they fledge, in effect bearing ectoparasite indicators of the species that raised them. The technique of examining the lice on cowbird fledglings to identify their foster parents would be much less costly than hiring a team of experts to determine parasitism patterns in the conventional way by finding hundreds of songbird nests. We examined 244 cowbird fledglings and found that they carried a rich fauna of lice representing 11 species and six genera, almost the entire spectrum of louse genera known to occur on passerines. We also examined 320 songbirds from 30 species, all known hosts of the Brown-headed Cowbird. As a group the host birds bore a diversity of louse species comparable to that on the fledgling cowbirds: 13 species of lice from seven genera. In contrast, most individual passerine host species yielded only 1 or 2 louse species, significantly fewer than the cowbird fledglings (p < 0.0001). Of 44 fledgling cowbirds carrying lice, 11 were linked to their probable avian foster parents via louse indicators, and these are the Wood Thrush and Red-winged Blackbird. Eighteen additional fledglings were linked to one of two possible foster parents. We concluded that cowbird fledglings do carry away host lice and this survey technique provides a partial assessment of local community parasitism patterns. The incomplete state of passerine louse taxonomy requires anyone using this technique to de-louse both cowbird fledglings and local host species in order to have a reference collection of lice. Lice from cowbird fledglings can be identified by a skilled taxonomist and linked to particular host species, and the principal difficulty is the scarcity of skilled avian louse taxonomists. We also found an unusually rich louse fauna on 219 adult cowbirds, which supports the interpretation that lack of opportunity due to physical isolation has been the fundamental factor in the host specificity of lice observed in certain avian orders.

The Auk

A GIS modeling method applied to predicting forest songbird habitat

We have developed an approach for using “presence” data to construct habitat models. Presence data are those that indicate locations where the target organism is observed to occur, but that cannot be used to define locations where the organism does not occur. Surveys of highly mobile vertebrates often yield these kinds of data. Models developed through our approach yield predictions of the amount and the spatial distribution of good-quality habitat for the target species. This approach was developed primarily for use in a GIS context; thus, the models are spatially explicit and have the potential to be applied over large areas. Our method consists of two primary steps. In the first step, we identify an optimal range of values for each habitat variable to be used as a predictor in the model. To find these ranges, we employ the concept of maximizing the difference between cumulative distribution functions of (1) the values of a habitat variable at the observed presence locations of the target organism, and (2) the values of that habitat variable for all locations across a study area. In the second step, multivariate models of good habitat are constructed by combining these ranges of values, using the Boolean operators “and” and “or.” We use an approach similar to forward stepwise regression to select the best overall model. We demonstrate the use of this method by developing species-specific habitat models for nine forest-breeding songbirds (e.g., Cerulean Warbler, Scarlet Tanager, Wood Thrush) studied in southern Ohio. These models are based on species’ microhabitat preferences for moisture and vegetation characteristics that can be predicted primarily through the use of abiotic variables. We use slope, land surface morphology, land surface curvature, water flow accumulation downhill, and an integrated moisture index, in conjunction with a land-cover classification that identifies forest/nonforest, to develop these models. The performance of these models was evaluated with an independent data set. Our tests showed that the models performed better than random at identifying where the birds occurred and provided useful information for predicting the amount and spatial distribution of good habitat for the birds we studied. In addition, we generally found positive correlations between the amount of habitat, as predicted by the models, and the number of territories within a given area. This added component provides the possibility, ultimately, of being able to estimate population sizes. Our models represent useful tools for resource managers who are interested in assessing the impacts of alternative management plans that could alter or remove habitat for these birds.

Ecological Applications

Building hierarchical models of avian distributions for the State of Georgia

To predict the distributions of breeding birds in the state of Georgia, USA, we built hierarchical models consisting of 4 levels of nested mapping units of decreasing area: 90,000 ha, 3,600 ha, 144 ha, and 5.76 ha. We used the Partners in Flight database of point counts to generate presence and absence data at locations across the state of Georgia for 9 avian species: Acadian flycatcher (Empidonax virescens), brownheaded nuthatch (Sitta pusilla), Carolina wren (Thryothorus ludovicianus), indigo bunting (Passerina cyanea), northern cardinal (Cardinalis cardinalis), prairie warbler (Dendroica discolor), yellow-billed cuckoo (Coccyxus americanus), white-eyed vireo (Vireo griseus), and wood thrush (Hylocichla mustelina). At each location, we estimated hierarchical-level-specific habitat measurements using the Georgia GAP Analysis18 class land cover and other Geographic Information System sources. We created candidate, species-specific occupancy models based on previously reported relationships, and fit these using Markov chain Monte Carlo procedures implemented in OpenBugs. We then created a confidence model set for each species based on Akaike's Information Criterion. We found hierarchical habitat relationships for all species. Three-fold cross-validation estimates of model accuracy indicated an average overall correct classification rate of 60.5%. Comparisons with existing Georgia GAP Analysis models indicated that our models were more accurate overall. Our results provide guidance to wildlife scientists and managers seeking predict avian occurrence as a function of local and landscape-level habitat attributes.

Journal of Wildlife Management

Comparison of condition indices in migratory passerines at a stopover site in coastal Louisiana

We evaluated the utility of four nondestructive condition indices—body mass, body mass scaled by wing chord length, fat scoring, and total body electrical conductivity method (TOBEC)—as predictors of lipid levels in migrating Wood Thrushes ( Hylocichla mustelina ), Swainson's Thrushes ( Catharus ustulatus ), and Summer Tanagers ( Piranga rubra ). The Red-winged Blackbird ( Agelaius phoeniceus ), a winter resident, was examined for comparative purposes. In addition, we examined differences among species in relationships of total body lipids and condition indices. Body mass was the best index of lipid levels, explaining 36%-82% of the variation in total body lipids in all four species. The relative contributions of the other indices to the prediction of lipid mass varied among species although TOBEC was selected for inclusion in each regression equation. For two species, equations including TOBEC measurements had lower errors in lipid prediction than equations only using the other nondestructive indices. Errors in lipid prediction were large for all the regression equations based on condition indices. In many cases it will be necessary to develop species-specific equations to predict lipid levels with condition indices.

Louisiana

Empirical Bayes estimation of proportions with application to cowbird parasitism rates

Bayesian models provide a structure for studying collections of parameters such are considered in the investigation of communities, ecosystems, and landscapes. This structure allows for improved estimation of individual parameters by considering them in the context of a group of related parameters. Individual estimates are differntially adjusted toward in overall mean, with the magnitude of their adjustment based on their precision. Consequently, Bayesian estimation allows for a more reliable ranking of parameters and, in particular, a more credible identification of extreme values from a collection of estimates. In Bayesian models, individual parameters are regarded as values sampled from a specified probability distribution, called a prior. The requirements that the prior be known is often regarded as an unattractive feature of Bayesian analysis and may be the reason Bayesian analyses are not frequently applied in ecological studies. Empirical Bayes methods provide an alternative approach that incorporates the structural advantages of Bayesian models while requirng a less stringent specification of prior knowledge. Empirical Bayes methods require only that the prior be in a certain family of distributions, indexed by hyperparameters that can be estimated from the available data. This structur is of interest per se, in addition to its value in allowing for improved estimation of individual parameters; for example, hypothese regarding the existence of distinct subgroups in a collection of paramet ers can be considered under the empirical Bayes framework by allowing the hyperparameters to vary among subgroups. We describe the empirical Bayes approach in application to estimation of proportions, using data obtained in a community—wide study Brown—headed Cowbird paratism rates for illustration. Empirical Bayes estimates identify those species for which there is the greatest evidence of extreme parasitism rates. Subgroup analysis of our data on cowbird parasitism rates indicates that parasitisms rates for neotropical migrants as a group are no greater than those of resident/short—distance migrant in this forest community. Our data and analyses demonstrate that the parasitism rates for certain neotropical migrant species (Wood Thrush and Rose—breasted Grosbeak) are remarkably low while those for others (Ovenbird and Red—eyed Vireo) are remarkably high.

Ecology

Estimation of population trajectories from count data

Monitoring of changes in animal population size is rarely possible through complete censuses; frequently, the only feasible means of monitoring changes in population size is to use counts of animals obtained by skilled observers as indices to abundance. Analysis of changes in population size can be severely biased if factors related to the acquisition of data are not adequately controlled for. In particular we identify two types of observer effects: these correspond to baseline differences in observer competence, and to changes through time in the ability of individual observers. We present a family of models for count data in which the first of these observer effects is treated as a nuisance parameter. Conditioning on totals of negative binomial counts yields a Dirichlet compound multinomial vector for each observer. Quasi-likelihood is used to estimate parameters related to population trajectory and other parameters of interest; model selection is carried out on the basis of Akaike's information criterion. An example is presented using data on Wood thrush from the North American Breeding Bird Survey.

Biometrics