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At least 37 records · Page 2Linked to original sources
USGS2011

Exxon Valdez oil spill restoration project final report: Prince William Sound Herring disease program (HDP), restoration project 070819

Surveys of pathogens in Pacific herring from 2007 – 2010 indicated that Ichthyophonus , viral hemorrhagic septicemia virus, and erythrocytic necrosis virus are endemic in Prince William Sound and throughout the NE Pacific. Laboratory studies with VHSV indicated that multiple herring stocks are equally susceptible to the resulting disease, Pacific herring shed copious levels of VHSV (as high at 5x10 8 plaque-forming units/day) shortly after exposure, chronic and persistent infections can occur in Pacific herring, susceptibility of Pacific herring to VHS extends to the larval life stages but not the embryonic stages, and the prior exposure history of Pacific herring to VHSV can be determined post hoc. Laboratory studies involving Ichthyophonus indicated that schizonts can be inactivated with chlorine and iodine solutions, the parasite can survive for extended periods in saltwater but not freshwater, a low potential exists for cross contamination between in vitro explant cultures, infectious schizonts are released from the skin surface of infected herring, schizonts are not uniformly distributed throughout the skeletal muscle of infected Pacific herring, multiple types of Ichthyophonus exist with different genotypes and phenotypic traits, and temperature is an important factor influencing the infectivity of Ichthyophonus . Additional field and laboratory studies indicated that Ichthyophonus negatively influences the swimming performance of infected hosts and the negative impacts effects are exacerbated by increasing temperatures, American shad are an important reservoir of Ichthyophonus in the NE Pacific, Pacific herring are not susceptible to infectious hematopoietic necrosis (IHN), and Pacific herring will accept surgically implanted acoustic tags with negligible impacts on survival.

Alaska, Washington↗
USGS2008

Integrated Fe- and S-isotope study of seafloor hydrothermal vents at East Pacific Rise 9-10°N

In this study, we report on coupled Fe- and S-isotope systematics of hydrothermal fluids and sulfide deposits from the East Pacific Rise at 9–10°N to better constrain processes affecting Fe-isotope fractionation in hydrothermal environments. We aim to address three fundamental questions: (1) Is there significant Fe-isotope fractionation during sulfide precipitation? (2) Is there significant variability of Fe-isotope composition of the hydrothermal fluids reflecting sulfide precipitation in subsurface environments? (3) Are there any systematics between Fe- and S-isotopes in sulfide minerals? The results show that chalcopyrite, precipitating in the interior wall of a hydrothermal chimney displays a limited range of δ 56 Fe values and δ 34 S values, between − 0.11 to − 0.33‰ and 2.2 to 2.6‰ respectively. The δ 56 Fe values are, on average, slightly higher by 0.14‰ relative to coeval vent fluid composition while δ 34 S values suggest significant S-isotope fractionation (− 0.6 ± 0.2‰) during chalcopyrite precipitation. In contrast, systematically lower δ 56 Fe and δ 34 S values relative to hydrothermal fluids, by up to 0.91‰ and 2.0‰ respectively, are observed in pyrite and marcasite precipitating in the interior of active chimneys. These results suggest isotope disequilibrium in both Fe- and S-isotopes due to S-isotopic exchange between hydrothermal H 2 S and seawater SO 4 2− followed by rapid formation of pyrite from FeS precursors, thus preserving the effects of a strong kinetic Fe-isotope fractionation during FeS precipitation. In contrast, δ 56 Fe and δ 34 S values of pyrite from inactive massive sulfides, which show evidence of extensive late-stage reworking, are essentially similar to the hydrothermal fluids. Multiple stages of remineralization of ancient chimney deposits at the seafloor appear to produce minimal Fe-isotope fractionation. Similar affects are indicated during subsurface sulfide precipitation as demonstrated by the lack of systematic differences between δ 56 Fe values in both high-temperature, Fe-rich black smokers and lower-temperature, Fe-depleted vents.

Chemical Geology↗
USGS2005

The seasonal cycle of diabatic heat storage in the Pacific Ocean

This study quantifies uncertainties in closing the seasonal cycle of diabatic heat storage (DHS) over the Pacific Ocean from 20??S to 60??N through the synthesis of World Ocean Circulation Experiment (WOCE) reanalysis products from 1993 to 1999. These products are DHS from Scripps Institution of Oceanography (SIO); near-surface geostrophic and Ekman currents from Earth and Space Research (ESR); and air-sea heat fluxes from Comprehensive Ocean-Atmosphere Data Set (COADS), National Centers for Environmental Prediction (NCEP), and European Center for Mid-Range Weather Forecasts (ECMWF). With these products, we compute residual heat budget components by differencing long-term monthly means from the long-term annual mean. This allows the seasonal cycle of the DHS tendency to be modeled. Everywhere latent heat flux residuals dominate sensible heat flux residuals, shortwave heat flux residuals dominate longwave heat flux residuals, and residual Ekman heat advection dominates residual geostrophic heat advection, with residual dissipation significant only in the Kuroshio-Oyashio current extension. The root-mean-square (RMS) of the differences between observed and model residual DHS tendencies (averaged over 10??latitude-by-20??longitude boxes) is <20 W m-2 in the interior ocean and <100 W m-2 in the Kuroshio-Oyashio current extension. This reveals that the residual DHS tendency is driven everywhere by some mix of residual latent heat flux, shortwave heat flux, and Ekman heat advection. Suppressing bias errors in residual air-sea turbulent heat fluxes and Ekman heat advection through minimization of the RMS differences reduces the latter to <10 W m-2 over the interior ocean and <25 W m -2 in the Kuroshio-Oyashio current extension. This reveals air-sea temperature and specific humidity differences from in situ surface marine weather observations to be a principal source of bias error, overestimated over most of ocean but underestimated near the Intertropical Convergence Zone. ?? 2005 Elsevier Ltd. All rights reserved.

Progress in Oceanography↗
USGS2004

Oligocene and earliest Miocene diatom biostratigraphy of ODP leg 199 site 1220, equatorial Pacific

Completion of studies on material collected during Ocean Drilling Program Leg 199 at Site 1220 in the equatorial Pacific allows calibration of the ranges of >35 stratigraphically important diatoms to paleomagnetic stratigraphy for the Oligocene and earliest Miocene (~33.5–21.5 Ma). The taxonomy of these taxa is reviewed, and age estimates of their first and last occurrences are compiled. The diatom zonation for the Oligocene and earliest Miocene of the equatorial Pacific is revised and correlated with paleomagnetic stratigraphy. This biostratigraphy is likely to be applicable throughout the low-latitude regions of the world's oceans.

Proceedings of the Ocean Drilling Program: Scienti↗
USGS1999

Controlled field and laboratory studies on VHS and Ichtyophonus in Pacific herring: Section II in Investigations of disease factors affecting declines of Pacific herring populations in Prince William Sound

From 1995 through 1998 the controlled disease studies covered a wide range of topics including virus survival in seawater, development of natural immunity, effects of oil exposure on immunity, effect of synthetic immunosuppressants, epizootiology of VHSV in net pens, antibody production and the natural history of VHS in Pacific herring. Both VHSV and I. hoferi were was observed in fish that reached two-years-old while in captivity. Prior to 2 years old, fish that shown to be. serious pathogens of juvenile hening. A natural age-related resistance to VHS virus plaque assay and resistance to reinfection with the known minimum lethal dose of virus. survived an initial infection by VHSV developed an acquired immunity detectable by in vitro Three years of consecutive monthly sampling of wild 0-year herring in Puget Sound revealed a VHSV carrier rate below 1%, but that this level of virus shedding was adequate to initiate an epizootic under confined conditions, and probably resulted in infection of free-ranging fish also. Over 50% of the virus was recoverable from seawater after 2 hours, was still detectable after six hours, and survived up to 100 h when ovarian fluid was present in the water. Studies in PWS demonstrated that closed pounds play a role in transmission of VHSV to impounded fish steadily increased with confinement time and viral tissue titers were at very high susceptible fish, resulting in the rapid spread of virus within the pens. Prevalence of VHSV from levels in fish being released after 8 days in captivity. Viable virus was also recovered from the water inside and outside the net pens at levels adequate to initiate an epizootic in susceptible fish. of herring and that vitro culture was the most sensitive method for detecting it. Studies on Ichthyophonus hoferi demonstrated that the organism is a potential serious pathogen No evidence for increased susceptibility, mortality or loss of disease resistance was observed in wild or laboratory-reared herring exposed to oil or synthetic corticosteroids, either prior to or following exposure to VHSV.

Report↗
USGS2017

Temporal genetic population structure and interannual variation in migration behavior of Pacific Lamprey Entosphenus tridentatus

Studies using neutral loci suggest that Pacific lamprey, Entosphenus tridentatus , lack strong spatial genetic population structure. However, it is unknown whether temporal genetic population structure exists. We tested whether adult Pacific lamprey: (1) show temporal genetic population structure; and (2) migrate different distances between years. We non-lethally sampled lamprey for DNA in 2009 and 2010 and used eight microsatellite loci to test for genetic population structure. We used telemetry to record the migration behaviors of these fish. Lamprey were assignable to three moderately differentiated genetic clusters ( F ST = 0.16–0.24 for all pairwise comparisons): one cluster was composed of individuals from 2009, and the other two contained individuals from 2010. The F ST value between years was 0.13 and between genetic clusters within 2010 was 0.20. A total of 372 (72.5%) fish were detected multiple times during their migrations. Most fish (69.9%) remained in the mainstem Willamette River; the remaining 30.1% migrated into tributaries. Eighty-two lamprey exhibited multiple back-and-forth movements among tributaries and the mainstem, which may indicate searching behaviors. All migration distances were significantly greater in 2010, when the amplitude of river discharge was greater. Our data suggest genetic structuring between and within years that may reflect different cohorts.

Oregon↗
USGS2001

Critical habitat for ovigerous Dungeness crabs

The Dungeness crab, Cancer magister , supports an important fishery in the northeastern Pacific Ocean, yet there is limited knowledge of ovigerous female brooding locations and brooding behavior. Our earlier research suggests that ovigerous crabs aggregate at the same brooding locations for many years. Within these locations, ovigerous females occur in high densities, with the majority of the aggregation buried within the sediment. These locations often have similar water depths and sediment types and appear to be critical for this life history stage. Our study was designed to examine the bathymetric distribution of Dungeness crabs in bays with and without sea otters at eight locations within the Glacier Bay area by conducting transects with a video-equipped manned submersible. Two of the bays investigated contained large aggregations of ovigerous females. At both sites the substrate was composed primarily of sand. However, only a small percentage of the 33 km of transects were classified as sand. These data suggest that sand substrate may be a limiting resource. Since crab brooding aggregations represent a large portion of the crab population within a small area, and because they are a critical component of Dungeness life history, areas with these characteristics need to be investigated, mapped, and protected from development or exploitation. The areas requiring protection from the impact of anthropogenic wastes, fishing, and logging activities could be quite small, thus limiting conflict with alternative users.

Conference Paper↗
USGS2007

Survival and tag retention of Pacific lamprey larvae and macrophthalmia marked with coded wire tags

We examined the survival, tag retention, and growth of Pacific lamprey Lampetra tridentata larvae and macrophthalmia marked with standard-length decimal coded wire tags and exposed to two levels of handling stress. The survival of marked individuals did not differ from that of unmarked individuals at either life stage for the duration of the experiment (56 d). Tag retention was 100% for all treatment combinations except larvae that were handled frequently (93 ?? 3%). The majority of tag loss occurred within 28 d of marking, and no tag loss was observed between 42 and 56 d after marking. The individuals that lost tags were among the smallest marked, and a logistic regression model indicated a relationship between larva length and the probability of tag retention. Size of larvae (length and mass) and macrophthalmia (mass) decreased over the duration of the experiment; however, changes in size were systematic among treatment combinations, indicating that factors other than tagging or handling affected growth. These data indicate that coded wire tags may be useful for field-based studies of Pacific lamprey larvae and macrophthalmia.

North American Journal of Fisheries Management↗
USGS2022

Elevations of mangrove forests of Pohnpei, Micronesia

Mangrove surface elevation is the crux of mangrove vulnerability to sea level rise. Local topography influences critical periods of tidal inundation that govern distributions of mangrove species and dictates future distributions. This study surveyed ground surface elevations of the extensive mangroves of Pohnpei, Federated States of Micronesia, integrating four survey technologies to solve issues of canopy blocking satellite reception, dense aerial roots limiting line-of-sight, and remoteness from surveyed datums. The island-wide average elevation of the mangrove seaward edge was −0.57 ± 0.13 m relative to MSL, while the landward average elevation was 0.33 ± 0.12 m relative to MSL. The overall mangrove elevation range was thus estimated to be 0.90 m. Mangrove species Bruguiera gymnorrhiza , Rhizophora apiculata and Sonneratia alba had large, overlapping elevation ranges, while Rhizophora stylosa occurred low in the tide frame. These species are likely to be less vulnerable to rising sea level given their greater range of elevation occurrence and presumably flooding tolerance, and hence have the highest adaptive capacity to rising sea level. Some landward edge species had very narrow elevation ranges, increasing their vulnerability to sea-level rise, with adjacent potential upland migration areas limited due to steep topography and human development. Pohnpei mangroves occupied 74% of the mean tidal range, similar to surveys elsewhere in the Pacific. This study demonstrates how more extensive understanding of the elevation distributions of intertidal species can contribute to sea-level rise vulnerability assessments, to allow prioritised climate change adaptation. However, more work is needed in standardizing approaches for global comparisons.

Estuarine, Coastal and Shelf Science↗
USGS1984

Observations on Cretaceous abyssal hills in the northeast Pacific

An abyssal hills area of 50 × 60 km in the northeast Pacific was studied using bottom transponder navigation, closely spaced survey lines, and long-traverse oblique photography. The block-faulted north—south hills are bounded by scarps, commonly with 40° slopes. On these steep scarps sedimentation is inhibited and pillow basalts often crop out. An ash layer of high acoustic reflectivity at about 7 m subbottom depth blankets the area. This ash occurs in multiple beds altered to phillipsite and is highly consolidated. A 24 m.y. age for the ash is based on ichthyolith dates from samples in the overlying sediments. Acoustically transparent Neogene sediments above the ash are thickest in trough bottoms and are absent or thin on steep slopes. These Neogene sediments are composed of pale-brown pelagic clays of illite, quartz, smectite, chlorite and kaolinite. Dark-brown pelagic clays, rich in smectite and amorphous iron oxides, underlie the Neogene surficial sediments. Manganese nodules cover the bottom in varying percentages. The nodules are most abundant near basement outcrops and where the subbottom ash layer is absent.

Marine Geology↗
USGS2014

Gross and microscopic pathology of hard and soft corals in New Caledonia

We surveyed the reefs of Grande Terre, New Caledonia, for coral diseases in 2010 and 2013. Lesions encountered in hard and soft corals were systematically described at the gross and microscopic level. We sampled paired and normal tissues from 101 and 65 colonies in 2010 and 2013, respectively, comprising 51 species of corals from 27 genera. Tissue loss was the most common gross lesion sampled (40%) followed by discoloration (28%), growth anomalies (13%), bleaching (10%), and flatworm infestation (1%). When grouped by gross lesions, the diversity of microscopic lesions as measured by Shannon&ndash;Wiener index was highest for tissue loss, followed by discoloration, bleaching, and growth anomaly. Our findings document an extension of the range of certain diseases such as Porites trematodiasis and endolithic hypermycosis (dark spots) to the Western Pacific as well as the presence of a putative cnidarian endosymbiont. We also expand the range of species infected by cell-associated microbial aggregates, and confirm the trend that these aggregates predominate in dominant genera of corals in the Indo-Pacific. This study highlights the importance of including histopathology as an integral component of baseline coral disease surveys, because a given gross lesion might be associated with multiple potential causative agents.

Grande Terre, New Caledonia↗
USGS2017

Are coastal managers ready for climate change? A case study from estuaries along the Pacific coast of the United States

A key challenge for coastal resource managers is to plan and implement climate change adaptation strategies inlight of uncertainties and competing management priorities. In 2014, we held six workshops across estuaries along the Pacific coast of North America with over 150 participants to evaluate resource managers' perceived level of understanding of climate change science, where they obtain information, how they use this knowledge, and their preparedness for incorporating climate change into their management decisions. We found that most resource managers understood the types of climate change impacts likely to occur in their estuaries, but often lacked the scientific information to make decisions and plan effectively. Managers stated that time, money, and staff resources were the largest obstacles in their efforts. Managers identified that they learned most of their information from peers, scientific journals, and the Internet and indicated that sea-level rise was their greatest concern. There was, however, variation in managers' levels of readiness and perceived knowledge within and among workshop locations. The workshops revealed that some regions don't have the information they need or the planning capacity to effectively integrate climate change into their management, with eight out of fifteen site comparisons showing a significant difference between their level of preparedness (F 5,26 = 6.852; p = 0.0003), and their willingness to formally plan (F 5,26 = 12.84; p = 0.000002). We found that Urban estuaries were significantly different from Mixed Use and Rural estuaries, in having access to information and feeling more prepared to conduct climate change planning and implementation (F 2,29 = 17.34; p = 0.00001). To facilitate climate change preparedness more comprehensive integration of science into management decisions is essential.

Ocean and Coastal Management↗
USGS1978

U.S. Geological Survey offshore program of resource and geo-environmental studies and topical investigations, Pacific-Arctic region

The Geological Survey's marine geology investigations in the Pacific-Arctic area are presented in this report in the context of the underlying socio-economic problem of expanding the domestic production of oil and gas and other mineral and hard- and soft-rock resources while maintaining acceptable standards in the marine environment. The primary mission of the Survey 's Pacific-Arctic Branch of Marine Geology is to provide scientifically interpreted information about the (1) resource potential, (2) geo-environmental setting, and (3) overall geologic characteristics of the continental margins (that is, the continental shelf, slope and rise) and adjacent deeper water and shallower coastal areas off California, Oregon, Washington, Alaska and Hawaii and also, where it is of interest to the U.S. Government, more remote deep-sea areas of the Pacific-Arctic realm.

Open-File Report↗