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Development of vegetation based soil quality indices for mineralized terrane in arid and semi-arid regions

Soil quality indices (SQIs) are often management driven and attempt to describe key relationships between above- and below-ground parameters. In terrestrial systems, indices that were initially developed and modified for agroecosystems have been applied to non-agricultural systems in increasing number. We develop an SQI in arid and semi-arid ecosystems of the Western US impacted by different types of geologic mineralization using the relationship between vegetation community parameters and soil abiotic and biotic properties. We analyze these relations in soils associated with three different mineralization types: podiform chromite, Cu/Mo porphyry, and acid-sulfate gold vein systems at four different sites in California and Nevada. Soil samples were collected from undisturbed soils in both mineralized and nearby unmineralized substrates as well as from waste rock and tailings. Aboveground net primary productivity (ANPP), canopy cover and shrub density were measured for the vegetative communities. Minimum data sets were developed based on correlations between the soil and vegetation parameters, refined using principal components analysis, scored using non-linear functions, and combined into an overall SQI. The indices are comprised of one or two microbial parameters and three to six abiotic parameters, the latter consisting of nutrients and metals. Given the preliminary development of this approach, the parameters and combinations to arrive at an SQI for a given site cannot at this time be correlated or compared with that of another site. This SQI approach provides a means of quantifying disturbed ecosystem recovery resulting from mining, and could be applied to other disturbances in a way that readily distills the information for potential use by land managers. However, severely disturbed areas with little to no aboveground biomass, such as unreclaimed tailings, have likely crossed an ecological threshold that precludes the use of this type of monitoring tool.

California

Status of water-quality conditions in the United States, 2010–20

Degradation of water quality can make water harmful or unusable for humans and ecosystems. Although many studies have assessed the effect of individual constituents or narrow suites of constituents on freshwater systems, no consistent, comprehensive assessment exists over the wide range of water-quality effects on water availability. Using published studies, data, and models completed at regional or national scales in the United States during 2010–20, this chapter moves towards a comprehensive assessment by summarizing how selected anthropogenic and geogenic water-quality constituents affect national-scale water availability for human and ecosystem needs. Several types of human health, agricultural, ecological, and beneficial-use standards or thresholds were used to provide context for categorizing surface-water and groundwater quality. Water availability for human and ecological use is limited by elevated concentrations of geogenic and anthropogenic constituents in surface and groundwater. Elevated concentrations of five geogenic constituents (arsenic, manganese, strontium, radium, and adjusted gross alpha) are common in groundwater and collectively affect the drinking water supply to over 30 million people. Surface water sourced drinking water supplies are impaired in about a third of assessed stream miles, most commonly because of non-mercury metals and salinity. Health-based violations at community water systems may disproportionately affect socially vulnerable communities. Ecological water uses are predominantly limited by nutrients, sediment, temperature, pathogens, salinity, and pesticides. Water availability for human and ecological use is adversely affected by human activities including human contaminant sources (for example, wastewater, agriculture), processes (for example, dredging, groundwater pumping), or permanent landscape modifications (for example, dams, urbanization). Primary contaminant sources vary spatially and include fertilizer and manure, atmospheric deposition, wastewater treatment plants, urban land, and a range of natural sources. Contaminants of emerging concern, contaminants without regulatory thresholds, and mixtures of geogenic and anthropogenic water contaminants also contribute to ecological degradation and human exposure.

conterminous United States

Alternative approaches to dryland reclamation enhance vegetation cover and soil stability at a former uranium mine

Introduction Conventional reclamation methods to recover dryland ecosystems after mineral extraction often have low success. Alternative reclamation techniques may help overcome the many challenges to establishing persistent native vegetation and stable soils. Objectives Compare conventional reclamation approaches that focus primarily on soil stabilization to alternative approaches that may improve native ecosystem restoration at the Kanab North Mine in northern Arizona. Methods In a fully crossed experiment, conventional seed mix (native and non-native species) and seeding methods (drill-seeding) were compared to alternative practices, including a native-only seed mix, connectivity modifiers (ConMods) with hand seeding, and a biocrust inoculation. Restoration metrics like plant establishment, species composition, soil surface cover and stability, biocrust establishment, and near-surface wind-driven sediment were monitored over the first 5 years post-reclamation. Results While all restoration metrics improved with time, compared to traditional methods, ConMods increased total, graminoid, and native plant species cover, and the native-only seed mix increased woody, native, and perennial species cover. Biocrust inoculation increased late-successional biocrust development, but biocrusts only persisted over 5 years in combination with ConMods. Soil stability increased in all treatments, but both ConMods and biocrust inoculation increased stability compared to traditional practices. Conclusion Overall, alternative approaches to reclamation tested here (ConMods, native seed, and biocrust inoculation) were more effective than traditional practices at increasing total plant cover, facilitating biocrust establishment, and promoting soil stability after uranium mine reclamation.

Arizona

Spatial variation in effectiveness and costs of sagebrush restoration treatments across the western United States

Natural resource managers strive to improve restoration efficiency across the vast network of public lands of the United States, seeking the best return on investment through innovation, geographic prioritization, and adaptive management. This challenge is exemplified by ecosystems dominated by sagebrush ( Artemisia spp.), which occur across the western United States and have been degraded by increasing wildfire frequency driven by invasive plant spread, among other factors. However, both costs and effectiveness of sagebrush restoration can vary spatially due to management practices in addition to biotic and abiotic factors, and characterizing this variation could inform broad-scale planning. We leveraged published models of sagebrush recovery and treatment costs to predict and evaluate cost-effectiveness of aerial and drill seeding Artemisia spp. across 429 718 km 2 that overlapped 12 US states. Compared to natural recovery, effectiveness for both methods was generally low, yet effectiveness was often greater, and costs were always greater, for drill than aerial seeding, resulting in slightly higher cost-effectiveness on average for drill seeding. Cost-effectiveness for both treatments increased near major roads and in areas with more repeated burns. Cost-effectiveness also increased with predisturbance cover of sagebrush but decreased with herbaceous cover. However, we also identified areas where aerial seeding was more cost-effective than drill seeding, particularly with greater slope. Our results provide spatially explicit estimates and potential mechanisms of cost-effectiveness for two common seeding methods for sagebrush, which can help prioritize limited resources, guide land use, and improve restoration efficiency and effectiveness across public rangelands of the western United States.

western United States

Estimating habitat availability for Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) to inform reintroduction planning in the middle Snake River basin, USA

Anadromous fishes have been blocked from the middle Snake River basin since the construction of flood control, irrigation, and hydroelectric projects during the 19 th and 20 th centuries, culminating with the construction of Hells Canyon Dam (river kilometer [rkm] 398) in 1967. Seven large watersheds in the blocked area of the basin are under consideration for Pacific salmon reintroduction. The primary objective of this study was to identify and characterize potential reintroduction sites with high-quality rearing and spawning habitat for Chinook salmon ( Oncorhynchus tshawytscha ) and steelhead ( O. mykiss ) upstream of the Hells Canyon Complex in Idaho, Oregon, and Nevada, USA. We created and tested habitat models to predict rearing presence/absence, rearing abundance, and spawning presence/absence using channel morphology, hydrology, and stream temperature variables obtained from regional peer-reviewed datasets. Habitat models were trained with salmonid presence and abundance records collected in the lower Snake River basin (downstream of Hells Canyon Dam), where anadromous fish can currently access, from 1993 to 2011. Model performance was tested with set-aside data comprised of randomly selected reaches and independent environmental DNA data. An index model was created in the middle Snake River basin for each species by combining results from the habitat models. Modeling covariates differed by species and life stage and included different combinations of August stream temperature, summer flow, channel slope, and quadratic terms for temperature and slope. The habitat models predicted high versus low Chinook salmon and steelhead probability and abundance with 66% to 85% accuracy depending on species and life stage. The index models predicted a total of 2,887 km of Chinook salmon habitat and 2,434 km of steelhead habitat in the blocked area. The three basins in the blocked area with the greatest amount of predicted habitat were the Powder River, South Fork Payette River, and North Fork Payette River for Chinook salmon, and the Powder River, South Fork Boise River, and South Fork Payette River for steelhead. The modeling approach presented here is complementary to other planning efforts for Chinook salmon and steelhead reintroduction in the blocked area of the Snake River basin, and similar approaches may be useful for reintroduction planning in other systems.

Idaho, Nevada, Oregon, Utah, Washington, Wyoming

Age and colony variation in Adélie penguin metapopulation vital rates: Insights from a 25-year mark–recapture study

Understanding how vital rates vary with age, life-history stage, and among populations is fundamental for predicting the demographic consequences of environmental change, especially in longer-lived species with complex life histories. These species often exhibit delayed maturity and iteroparity, making nuanced demographic insights critical for assessing their long-term viability. This study investigated age- and colony-related variation in Adélie penguin vital rates including survival, recruitment, and breeding propensity. We used mark–recapture data collected over 25 years (1996–2020) from three Adélie penguin breeding colonies that differed in population sizes and trends but comprised a metapopulation located at capes Royds, Bird, and Crozier on Ross Island, Antarctica. We used multi-state models to estimate survival and detection rates relative to reproductive state and breeding colony and estimated transition probabilities reflecting movements between reproductive states and colonies. Apparent survival varied by reproductive state, colony, and age and averaged 0.80 (SD = 0.02) at Bird, and 0.72 (SD = 0.03) and 0.73 (SD = 0.03) at Crozier and Royds, respectively, for pre-breeders age 2–7 years with strong declines in pre-breeder survival after age 8. We observed less age-related variation in survival of breeders and non-breeders, but we observed differences between colonies with lower survival for breeders (0.72 to 0.80) compared to non-breeders (0.75 to 0.82). The average probability of surviving the first 2 years after fledging ranged from 0.43 (SD = 0.14) at Royds and Crozier (0.43, SD = 0.10) to 0.55 (SD = 0.15) at Bird. Movement between colonies was highest for pre-breeders (0.00%–12.00% depending on age and colony) and lowest for breeders (<0.20%). We observed the lowest age-related recruitment rates at Royds, with recruitment at Crozier almost twice as high, and intermediate at Bird. Breeding propensity was highest at Crozier and lowest at Bird. Colony-specific variation in vital rates likely contributed differently to population trajectories, suggesting that care must be taken to extrapolate vital rate estimates across colonies even within a metapopulation. These findings also highlight the importance of considering age, life-history stage, and geographic variation when assessing population vital rates in species with complex life histories.

Frontiers in Ecology and Environment

Fossil diatoms in Arctic marine surface sediments

Diatoms are one of the main constituents of marine phytoplankton in the Arctic, and thanks to their siliceous skeletons, diatom fossils are relatively well preserved in sediments. Due to their species-specific sensitivity to different ocean conditions, their abundance and assemblages in sediments are routinely used by paleoceanographers to reconstruct the state of the surface ocean in the past (Koç 2007). By using statistical methods, we can obtain valuable knowledge about their ecological preferences (Oksman et al. 2019) and generate quantitative reconstructions of various parameters, such as sea-surface temperature and sea-ice concentration through time (Krawczyk et al. 2021; Sha et al. 2014). The Marine Arctic Diatoms (MARDI) working group (WG) ( pastglobalchanges.org/mardi ) aims to advance knowledge on marine-diatom ecology and diatom-based reconstructions by compiling and harmonizing data from surface-sediment samples across the Arctic.

Pages Magazine

Hydrological control on soil redox condition and carbon loss of coastal wetland under sea-kevel rise

Coastal wetlands are critical carbon sinks with their biogeochemical and ecological functioning shaped by dynamic hydrological conditions that are increasingly influenced by climate change. A key unresolved question is how hydrologic flow, vegetation response, and rising sea levels interact to regulate soil redox condition and carbon loss in coastal wetlands. Using a field-tested hydrological–biogeochemical–ecological modeling framework, we reveal how the interplay between terrestrial groundwater discharge and tidal fluctuations generates complex groundwater flow patterns at the terrestrial–aquatic interface, and how these patterns modulate soil redox conditions, in turn influencing soil organic matter decomposition and carbon loss. Notably, rising sea levels suppress soil CO 2 emissions while reducing lateral dissolved carbon losses, thereby enhancing litter carbon sequestration under anoxic conditions. As vegetation responds to sea-level rise and carbon inputs diminish, litter carbon subsequently declines. These findings underscore a critical hydrological control on carbon cycling, advancing our understanding of coastal ecosystem resilience in a warming world.

Louisiana

Simulated ground motion dataset in the Azores Plateau, Portugal, on rock and soil sites

Building on a previously developed bedrock dataset, this study extends the Azores Plateau ground motion simulations to include soil-amplified records and introduces a comprehensive validation framework. Soil amplification is modeled using one-dimensional soil profiles. A stochastic source-based approach is employed to generate the dataset, incorporating randomization of input-model parameters to account for the aleatory uncertainty in seismic activity. The accuracy of the dataset is verified through a comprehensive validation framework, showing that the randomization effectively captures variance and inter-period correlation observed in records. This work provides a robust dataset for advancing seismic hazard and risk assessment in the Azores Plateau.

central and eastern Azores islands

Irrigated agriculture influences selenium levels in an endangered marsh bird

Selenium bioaccumulation in aquatic food webs poses risks to wildlife, particularly in wetlands receiving irrigation runoff. The Salton Sea, California’s largest lake, is primarily sustained by agricultural drainage. This drainage creates wetland habitat along the lakeshore that many bird species depend on, including the federally endangered Yuma Ridgway’s rail ( Rallus obsoletus yumanensis ). However, these marshes may pose an ecological trap – attracting rails despite high selenium exposure. We captured rails during the 2020–2023 breeding seasons and compared rail selenium levels within three types of marshes (fed with irrigation runoff, Colorado River water, or groundwater). We collected blood, breast feathers, and head feathers of rails in all three water sources for selenium comparisons. We tagged adult rails with GPS transmitters to locate nests and foraging locations where we collected eggshells, unhatched eggs, and prey. We assessed selenium exposure by collecting multiple prey species commonly eaten by rails in all three water sources. Selenium concentrations varied among sampling locations. Selenium concentrations in most sample types were predominately influenced by water source and marsh inflow velocity (sometimes in combination with marsh size). Distance to inflow, however, did not influence selenium concentrations in any sample type. Selenium concentrations were highest in agricultural-fed marshes compared to river-fed and spring-fed marshes. Increased marsh inflow velocities resulted in lower selenium concentrations. Given the risk of an ecological trap, our results suggest that supplementing wetlands with Colorado River water could mitigate selenium bioaccumulation in Yuma Ridgway’s rails.

California

Multi-scale predictors of Northern Long-eared Bat (Myotis septentrionalis) occupancy in the United States

Historically, Myotis septentrionalis (Northern Long eared Bat) was among the most common forest-interior species in North America. Largely due to high mortality from white-nose syndrome, this species has experienced severe population declines across its range. To create an updated species distribution map representing summer occupancy probabilities from 2017 to 2022, we integrated stationary acoustic data with live-capture data from the database of the North American Bat Monitoring Program into a multi-scale, multi-method occupancy modeling framework. Our results provide data-driven predictions with quantified uncertainty for summer occupancy probabilities for Northern Long-eared Bats at 2 spatial scales across the range of the species, while also accounting for inherent observation biases (e.g., imperfect detection).

Journal of North American Bat Research

Remote compositional analyses of space-weathered lunar maria

Visible-to-shortwave infrared (VSWIR) reflectance spectroscopy has revolutionized our understanding of planetary surface compositions. However, space-weathering processes on airless bodies complicate quantitative compositional analyses. Here, we present a framework to isolate the signatures of space weathering in VSWIR spectra of lunar maria by leveraging radiative transfer modeling under the assumptions that (i) a space-weathered target can be expressed as a mixture of fresh and fully space-weathered components and (ii) remaining signatures can be modeled by including agglutinates as an end-member component. We first validate this approach against laboratory spectra of space-weathered Apollo mare soils of known mineral compositions using a probabilistic Markov Chain Monte Carlo implementation of the Hapke radiative transfer model. Second, we illustrate how this approach can be applied to orbital Moon Mineralogy Mapper data. The proposed space-weathering correction workflow for lunar maria could be expanded to other lunar lithologies and applied to existing and future data sets.

Planetary Science Journal

Statewide surficial geologic map of Nebraska underscores Quaternary landscape evolution from the High Plains to the Central Lowland

Surficial geologic mapping in Nebraska has been conducted primarily at the 1:24,000 scale since the mid-1990s, although there have also been limited efforts to map generalized Quaternary and surficial geology within the state and the region. We compiled and evaluated disparate maps (1:24,000–1:1,000,000) and datasets—including geologic, soil and soil parent material, and geomorphic maps as well as LiDAR derivatives—to produce a single 1:500,000 scale surficial geologic map of Nebraska that is the first of its kind. This new map provides a coarse-scale surficial geologic map that will be incorporated into a nationwide U.S. Geological Survey Quaternary geologic map. It also reflects the variation and uniqueness of physical landscapes in the state, where the Great Plains and Central Lowland physiographic provinces meet, further developing a richer interdisciplinary understanding of regional geomorphology in the heart of North America.

Nebraska

Prospectivity modeling of the NASA VIPER landing site at Mons Mouton near the Lunar South Pole

We use a high-resolution digital elevation model and a numerical thermal model to produce a variety of inputs for a water-ice prospectivity model for the Volatiles Investigating Polar Exploration Rover (VIPER) landing site. These input data are maps of topography, surface slope, surface aspect, surface curvature, maximum temperature, depth to ice stability, permanently shadowed regions (PSRs), distance to PSRs, and PSR density. This model predicts where water ice is most likely within the top meter of regolith, assuming plausible relationships between ice concentration and the various inputs. The model is designed to be adjusted in near-real time as data are collected during the VIPER mission. As such, it is a tool for both analyzing data from the mission as well as planning operations. Since the current model, at this point, relies only on orbital remote sensing, the final version will also be a tool to extrapolate the VIPER mission results across the lunar poles.

Planetary Science Journal

Synthesizing a twelve-year sediment trap time series of planktic foraminiferal flux in the Gulf of America (Mexico)

Sediment trap time series provide powerful frameworks for testing hypotheses about planktic foraminiferal assemblage composition, seasonality, and geochemical responses to environmental variability, all of which are central to improving paleoceanographic reconstructions. We present high resolution foraminiferal assemblage data from a long-running sediment trap (2008–2020) in the northern Gulf of America (Mexico). This study summarizes the species composition, seasonality, and size distribution of the fifteen most abundant species of planktic foraminifera, which account for 98% of total flux. Foraminiferal flux peaks in winter and reaches a minimum in summer, following the seasonal pattern of primary production in the northern Gulf. Winter assemblages are dominated by non-spinose taxa, whereas spinose taxa prevail during summer. Across nearly all species, average monthly test size covaries with temperature, independent of seasonal flux trends. Notably, Trilobatus sacculifer and Neogloboquadrina dutertrei show a significant decline in relative abundance and flux during 2017–2020, nearly disappearing from the assemblage.

Journal of Foraminiferal Research

Avian navigation: Comparing the olfactory navigational “map” and the infrasound direction-finding hypotheses to aeronautics

Animal navigation has long been a fascinating but bewildering subject. Humans and animals might well share similar navigational strategies because they developed within the same physical environments. A “map-and-compass” model has been proposed to explain the two-step avian navigational process, but the “map” step has remained elusive. Although scalar values from bicoordinate geomagnetic or atmospheric olfactory gradients have been considered foundational to the avian map, neither has proved convincing engendering decades of controversy. The olfactory map, and an alternative infrasound direction-finding (IDF) hypothesis, are discussed in this review. The olfactory map hypothesis currently requires extensive stable gradients of trace-odor ratios, but such gradients are highly unlikely within a turbulent and rapidly mixed lower atmosphere. The IDF hypothesis, on the other hand, postulates a two-step navigational model analogous to the maritime and aeronautical radio direction-finding technique. This review was also written to encourage further investigation, and direct testing, of the acoustic navigational process. The IDF hypothesis, at present, appears the better explanation of observed avian navigational behavior and accuracy within the atmosphere’s physical environment.

Journal of Comparative Physiology A

National population exposure and evacuation potential in the United States to earthquake-generated tsunami threats

Previous efforts to characterize tsunami threats to people have focused primarily on individual scenarios in specific areas but have not recognized multiple scenarios across an entire country. This study addresses this gap by quantifying population exposure and evacuation potential in the United States to 102 earthquake-related, tsunami-hazard zones, including 92 local scenarios, 8 distant scenarios, and 2 probabilistic products. Geospatial path-distance modeling quantified evacuation potential and the influence of departure delays. We focused on residents to support other national, multi-hazard risk analyses. Millions of residents are in distant-tsunami zones, and hundreds of thousands of residents are in local-tsunami zones. In 41 scenarios, there is at least one resident that may have insufficient time to evacuate before wave arrival. Tens of thousands of residents may have insufficient time to evacuate from local tsunamis that impact the U.S. Pacific Northwest or Puerto Rican coastlines. The largest improvements in evacuation potential may come from reducing departure delays in some areas but may involve vertical-evacuation structures or changing land use in other areas.

International Journal of Disaster Risk Reduction