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The Zooplankton International Geospatial (ZIG) dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research

Zooplankton transfer substantial energy in aquatic food webs and are used as indicators of environmental change. Syntheses of zooplankton community dynamics globally require datasets that span a wide range of environmental gradients; however, these datasets are limited due to methodological differences across programs, taxonomic inconsistencies, and a lack of standardized metadata. To reconcile these challenges, we created the Zooplankton International Geospatial (ZIG) dataset, which includes original zooplankton, water physical and chemical variables, and lake morphometric data from 311 inland lakes and reservoirs. ZIG includes waterbodies ranging in size from 0.005 to 82,100 km 2 and spanning broad latitudinal (−47.26 to 64.90) and longitudinal ranges (−165.04 to 176.53). Temporal coverage for individual waterbodies ranges between 1 and 60 yr with sampling frequency ranging from annually to weekly. With its extensive coverage and content, we consider ZIG to be a cornerstone for future investigations of global scale lake biodiversity change.

Limnology & Oceanography - Letters

Progress Report: Stratton Ecological Research Site - An Experimental Approach to Assess Effects of Various Grazing Treatments on Vegetation and Wildlife Communities Across Managed Burns and Habitat Controls

Understanding how management practices affect wildlife is fundamental to wise decisions for conservation of public lands. Prescribed fire and grazing timing are two management tools frequently used within publicly owned sagebrush ecosystems. We conducted a variety of surveys in order to assess the impacts of grazing timing strategies (early summer before peak green-up, mid-summer at peak green-up, and late summer after peak green-up) in conjunction with prescribed fire on avian and small mammal populations in a high-elevation sagebrush ecosystem. Avian surveys resulted in a large detection sample size for three bird species: Brewer's sparrow (Spizella breweri), horned lark (Eremophila alpestris), and vesper sparrow (Pooecetes gramineus). Brewer's sparrows had the lowest number of detections within the mid-summer grazing treatment compared to early and late summer grazing treatments, while horned larks and vesper sparrows had higher detection frequencies within the late summer grazing treatment. Summer and fall sage-grouse (Centrocercus urophasianus) pellet counts revealed that the greatest over-winter and over-summer use by sage-grouse occurred within the early summer grazing treatment with minimal use of burn treatment areas across all grazing treatments. Deer-mice (Peromyscus maniculatus) represented approximately 90 percent of small mammals captured and were most prevalent within the mid-summer grazing treatment. Sagebrush cover was greatest within the mid-summer grazing treatment. We monitored 50 and 103 nests in 2007 and 2008, respectively. The apparent success rate for shrub-obligate nesting species was 58 percent in 2007 and 63 percent in 2008. This research will support management of sagebrush ecosystems by providing public land managers with direct comparisons of wildlife response to management regimes.

Open-File Report

Loch Vale watershed long-term ecological research and monitoring program quality assurance report, 2003-09

The Loch Vale watershed project is a long-term research and monitoring program located in Rocky Mountain National Park that addresses watershed-scale ecosystem processes, particularly as they respond to atmospheric deposition and climate variability. Measurements of precipitation depth, precipitation chemistry, discharge, and surface-water quality are made within the watershed and elsewhere in Rocky Mountain National Park. As data collected for the program are used by resource managers, scientists, policy makers, and students, it is important that all data collected in Loch Vale watershed meet high standards of quality. In this report, data quality was evaluated for precipitation, discharge, and surface-water chemistry measurements collected during 2003-09. Equipment upgrades were made at the Loch Vale National Atmospheric Deposition Program monitoring site to improve precipitation measurements and evaluate variability in precipitation depth and chemistry. Additional solar panels and batteries have been installed to improve the power supply, and data completeness, at the NADP site. As a result of equipment malfunction, discharge data for the Loch Outlet were estimated from October 18, 2005, to August 17, 2006. Quality-assurance results indicate that more than 98 percent of all surface-water chemistry measurements were accurate and precise. Records that did not meet quality criteria were removed from the database. Measurements of precipitation depth, precipitation chemistry, discharge, and surface-water quality were all sufficiently complete and consistent to support project data needs.

Colorado

A synergistic future for AI and ecology

Research in both ecology and AI strives for predictive understanding of complex systems, where nonlinearities arise from multidimensional interactions and feedbacks across multiple scales. After a century of independent, asynchronous advances in computational and ecological research, we foresee a critical need for intentional synergy to meet current societal challenges against the backdrop of global change. These challenges include understanding the unpredictability of systems-level phenomena and resilience dynamics on a rapidly changing planet. Here, we spotlight both the promise and the urgency of a convergence research paradigm between ecology and AI. Ecological systems are a challenge to fully and holistically model, even using the most prominent AI technique today: deep neural networks. Moreover, ecological systems have emergent and resilient behaviors that may inspire new, robust AI architectures and methodologies. We share examples of how challenges in ecological systems modeling would benefit from advances in AI techniques that are themselves inspired by the systems they seek to model. Both fields have inspired each other, albeit indirectly, in an evolution toward this convergence. We emphasize the need for more purposeful synergy to accelerate the understanding of ecological resilience whilst building the resilience currently lacking in modern AI systems, which have been shown to fail at times because of poor generalization in different contexts. Persistent epistemic barriers would benefit from attention in both disciplines. The implications of a successful convergence go beyond advancing ecological disciplines or achieving an artificial general intelligence—they are critical for both persisting and thriving in an uncertain future.

Proceedings of the National Academy of Sciences

Planning long-term vegetation studies at landscape scales

Long-term ecological research is receiving more attention now than ever before. Two recent books, Long-term Studies in Ecology: Approaches and Alternatives , edited by Gene Likens (1989), and Long-term Ecological Research: An International Perspective , edited by Paul Risser (1991), prompt the question, “Why are these books so thin?” Except for data from paleoecological, retrospective studies (see below), there are exceptionally few long-term data sets in terrestrial ecology (Strayer et al. 1986; Tilman 1989; this volume). In a sample of 749 papers published in Ecology , Tilman (1989) found that only 1.7% of the studies lasted at least five field seasons. Only one chapter in each of the review books dealt specifically with expanding both the temporal and the spatial scales of ecological research (Berkowitz et al. 1989; Magnuson et al. 1991). Judging by the growing number of landscape-scale long-term studies, however, such as the Long-Term Ecological Research (LTER) Program (Callahan 1991), the U.S. Environmental Protection Agency’s Environmental Monitoring and Assessment Program (EMAP; Palmer et al. 1991), the U.S. Army’s Land Condition-Trend Analysis (LCTA) Program (Diersing et al. 1992), and various agencies’ global change research programs (CEES 1993), there is a growing interest to expand ecological research both temporally and spatially.

Book chapter

The roles of physical habitat in reproduction and survival of pallid sturgeon and shovelnose sturgeon in the Lower Missouri River, progress 2005–06: Chapter D in Factors affecting the reproduction, recruitment, habitat, and population dynamics of pallid sturgeon and shovelnose sturgeon in the Missouri River

This report documents progress on three related components of habitat assessments in the Lower Missouri River during 2005–06. The habitat-use component links this research directly to sturgeon ecology research described in other chapters. The habitat availability and habitat dynamics assessments provide physical context for the ecological research. Results from 2005 to 2006 indicate that the methods developed to assess habitat use, quality, quantity, and dynamics are appropriate and sufficiently accurate to address critical questions about sturgeon habitat on the Lower Missouri River. Preliminary analysis of habitats occupied by adult female shovelnose sturgeon indicates that migrating sturgeon do not select for depth but seem to select for lower than reach-averaged velocities and higher than reach-averaged velocity gradients. Data collected to compile, calibrate, and validate multidimensional hydraulic models in probable spawning reaches appear to be sufficient to support the modeling objectives. Monitoring of selected channel cross sections and long profiles multiple times during the year showed little change at the upstreammost reach over the range of flows measured during 2006, likely because of channel stability associated with an armored bed. Geomorphic changes documented at monitoring cross sections increased with distance downstream. Hydroacoustic substrate-class parameters documented systematic changes with discharge and with hydraulic environment across the channel. Similarly, bed velocity varied predictably with discharge and hydraulic environment, indicating its potential as an indicator of bedload sediment transport. Longitudinal profiles showed substantial downstream movement of dunes over the monitored discharges, as well as substantial within-year variability in dune size. Observations of geomorphic change during the moderate flow range of 2006 support the hypothesis that the magnitude of flow modifications under consideration on the Lower Missouri River will be sufficient to transport sediment and potentially modify spawning habitats.

Lower Missouri River

Translational invasion ecology: Bridging research and practice to address one of the greatest threats to biodiversity

Effective natural resource management and policy is contingent on information generated by research. Conversely, the applicability of research depends on whether it is responsive to the needs and constraints of resource managers and policy makers. However, many scientific fields including invasion ecology suffer from a disconnect between research and practice. Despite strong socio-political imperatives, evidenced by extensive funding dedicated to addressing invasive species, the pairing of invasion ecology with stakeholder needs to support effective management and policy is lacking. As a potential solution, we propose translational invasion ecology (TIE). As an extension of translational ecology, as a framework to increase collaboration among scientists, practitioners, and policy makers to reduce negative impacts of invasive species. As an extension of translational ecology, TIE is an approach that embodies an intentional and inclusive process in which researchers, stakeholders, and decision makers collaborate to develop and implement ecological research via joint consideration of the ecological, sociological, economic, and/or political contexts in order to improve invasive species management. TIE ideally results in improved outcomes as well as shared benefits between researchers and managers. We delineate the steps of our proposed TIE approach and describe successful examples of ongoing TIE projects from the US and internationally. We suggest practical ways to begin incorporating TIE into research and management practices, including supporting boundary-spanning organizations and activities, expanding networks, sharing translational experiences, and measuring outcomes. We find that there is a need for strengthened boundary spanning, as well as funding and recognition for advancing translational approaches. As climate change and globalization exacerbate invasive species impacts, TIE provides a promising approach to generate actionable ecological research while improving outcomes of invasive species management and policy decisions.

Biological Invasions

Resilience is not enough: Toward a more meaningful rangeland adaptation science

Rangeland ecosystems, and their managers, face the growing urgency of climate change impacts. Researchers are therefore seeking integrative social-ecological frameworks that can enhance adaptation by managers to these climate change dynamics through tighter linkages among multiple scientific disciplines and manager contexts. Social-ecological framings, including resilience and vulnerability, are popular in such efforts, but their potential to inform meaningful rangeland adaptation science is limited by traditional disciplinary silos. Here, we provide reflective lessons learned from a multidisciplinary Rangelands, Ranching, and Resilience (R3) project on U.S. western rangelands that addressed 1) biophysical science projections of forage production under future climate scenarios, 2) ranchers’ views of resilience using social science methods, and 3) outreach efforts coordinated through extension professionals. Despite the project's initial intentions, human dimensions and ecological researchers largely worked in parallel sub-teams during the project, rather than weaving their expertise together with managers. The R3 project was multidisciplinary, but it provides a case study on lessons learned to suggest how social and ecological researchers can move towards approaches that transcend individual disciplines. Transdisciplinary science and management in rangelands requires more than just conceptual social-ecological frameworks. Additional methodological concepts need to include: 1) relationship building; 2) shared meaning making; and 3) a commitment to continual conversations and learning, or staying with the trouble, following Haraway (2016). If the goal is to address meaningful rangeland adaptation science rather than just produce academic products, researchers, outreach professionals, and rangeland-based communities should address a series of critical troubling questions. In the process of addressing these, deeper engagement among and beyond disciplines will occur as relationship building, shared meaning, and continual conversations and learning facilitate staying with the trouble.

Rangeland Ecology & Management

Lessons learned from long-term ecosystem research and monitoring in alpine and subalpine basins of the Colorado Rocky Mountains, USA

Long-term ecosystem research and monitoring was begun in the Loch Vale watershed of Rocky Mountain National Park in 1983, after extensive survey work to identify the best location. Then, as now, our scientific objectives were to understand natural biogeochemical cycles and variability, so that we could differentiate ecosystem changes from human-caused disturbances, such as atmospheric deposition of pollutants and climate change. We have learned many lessons, often through our mistakes, that are worth passing on. Clear scientific objectives, even for long-term monitoring, are essential. Standardized methods, including rigorous quality assurance procedures should be adhered to from the beginning of the program. All data, even those collected routinely for background records, should be scrutinized and summarized at least once a year. Freely share basic information such as weather, hydrologic, chemical, and descriptive records with other researchers who can build upon your efforts. Use many tools when asking complex ecological questions, in order to minimize bias toward specific results. Publish frequently; long-term studies do not imply there are no interim conclusions or interesting findings. Interpret findings frequently to policy makers and citizens; increased understanding of the environment and human-caused changes may improve natural resource management, and build support for ecological research. And finally, be persistent. Long-term ecological research can be frustrating and difficult to maintain, yet is often the best way to observe and understand ecological change on a meaningful time scale.

Colorado

Unfamiliar territory: Emerging themes for ecological drought research and management

Novel forms of drought are emerging globally, due to climate change, shifting teleconnection patterns, expanding human water use, and a history of human influence on the environment that increases the probability of transformational ecological impacts. These costly ecological impacts cascade to human communities, and understanding this changing drought landscape is one of today’s grand challenges. By using a modified horizon-scanning approach that integrated scientists, managers, and decision-makers, we identified the emerging issues in ecological drought that represent key challenges to timely and effective responses. Here we review the themes that most urgently need attention, including novel drought conditions, the potential for transformational drought impacts, and the need for anticipatory drought management. This horizon scan and review provides a roadmap to facilitate the research and management innovations that will support forward-looking, co-developed approaches to reduce the risk of drought to our socio-ecological systems during the 21 st century.

One Earth