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Integration of coral reef ecosystem process studies and remote sensing

Worldwide, local-scale anthropogenic stress combined with global climate change is driving shifts in the state of reef benthic communities from coral-rich to micro- or macroalgal-dominated (Knowlton, 1992; Done, 1999). Such phase shifts in reef benthic communities may be either abrupt or gradual, and case studies from diverse ocean basins demonstrate that recovery, while uncertain (Hughes, 1994), typically involves progression through successional stages (Done, 1992). These transitions in benthic community structure involve changes in community metabolism, and accordingly, the holistic evaluation of associated biogeochemical variables is of great intrinsic value (Done, 1992). Effective reef management requires advance prediction of coral reef alteration in the face of anthropogenic stress and change in the global environment (Hatcher, 1997a). In practice, this goal requires techniques that can rapidly discern, at an early stage, sublethal effects that may cause long-term increases in mortality (brown, 1988; Grigg and Dollar, 1990). Such methods would improve our understanding of the differences in the population, community, and ecosystem structure, as well as function, between pristine and degraded reefs. This knowledge base could then support scientifically based management strategies (Done, 1992). Brown (1988) noted the general lack of rigor in the assessment of stress on coral reefs and suggested that more quantitative approaches than currently exist are needed to allow objective understanding of coral reef dynamics. Sensitive techniques for the timely appraisal of pollution effects or generalized endemic stress in coral reefs are sorely lacking (Grigg and Dollar, 1990; Wilkinsin, 1992). Moreover, monitoring methods based on population inventories, sclerochronology, or reproductive biology tend to myopic and may give inconsistent results. Ideally, an improved means of evaluating reef stress would discriminate mortality due to natural causes from morality to anthropogenic causes (Brown, 1988). Models of coral reef ecosystems, parameterized by process measurements and scaled in time-space using remote sensing, have the potential to address pressing research questions that are central to devising valid management strategies (Grigg el al., 1984; Hatcher, 1997b). To attain this goal, ecosystem-level models that integrate studies of physical and chemical forcing with observed biological and geological responses are required. This interdisciplinary approach to understanding reef biogeochemical dynamics can allow investigations that integrate the scales of time and space (Hatcher, 1997a), thereby enabling prediction of coral reef change (Andréfouët and Payri, 2001). In turn, prediction of holistic ecosystem function within various environmental focusing scenarios has substantial promise in mitigating future disturbance. Indeed, management of coral reefs at the ecosystem level has been suggested as the only meaningful approach to preserving coral reefs (Bohnsack and Ault, 1996; Christensen et al., 1996).

Florida↗

Sources of global warming in upper ocean temperature during El Niño

Global average sea surface temperature (SST) from 40°S to 60°N fluctuates ±0.3°C on interannual period scales, with global warming (cooling) during El Niño (La Niña). About 90% of the global warming during El Niño occurs in the tropical global ocean from 20°S to 20°N, half because of large SST anomalies in the tropical Pacific associated with El Niño and the other half because of warm SST anomalies occurring over ∼80% of the tropical global ocean. From examination of National Centers for Environmental Prediction [ Kalnay et al. , 1996] and Comprehensive Ocean-Atmosphere Data Set [ Woodruff et al. , 1993] reanalyses, tropical global warming during El Niño is associated with higher troposphere moisture content and cloud cover, with reduced trade wind intensity occurring during the onset phase of El Niño. During this onset phase the tropical global average diabatic heat storage tendency in the layer above the main pycnocline is 1–3 W m −2 above normal. Its principal source is a reduction in the poleward Ekman heat flux out of the tropical ocean of 2–5 W m −2 . Subsequently, peak tropical global warming during El Niño is dissipated by an increase in the flux of latent heat to the troposphere of 2–5 W m −2 , with reduced shortwave and longwave radiative fluxes in response to increased cloud cover tending to cancel each other. In the extratropical global ocean the reduction in poleward Ekman heat flux out of the tropics during the onset of El Niño tends to be balanced by reduction in the flux of latent heat to the troposphere. Thus global warming and cooling during Earth's internal mode of interannual climate variability arise from fluctuations in the global hydrological balance, not the global radiation balance. Since it occurs in the absence of extraterrestrial and anthropogenic forcing, global warming on decadal, interdecadal, and centennial period scales may also occur in association with Earth's internal modes of climate variability on those scales.

Journal of Geophysical Research C: Oceans↗

Trends and biological effects of environmental contaminants in lamprey

Environmental contamination is of global concern. Lamprey are scientifically, ecologically, culturally, and economically important fishes. Our study represents the first synthesis ever on environmental contamination in lamprey. Objectives of this study include: (1) evaluate lethal and sublethal effects of environmental contaminants on lamprey, thereby providing insight into the potential for environmental contaminants to affect lamprey abundance, (2) highlight the unique characteristics of contaminant accumulation in lamprey, (3) determine whether spatial and temporal trends observed in contaminant concentrations of other top predators of aquatic food webs are reflected in the spatial and temporal trends of contaminant concentrations of lamprey, (4) identify key environmental contaminants affecting consumption advisories for people eating lamprey, and (5) identify important gaps in our knowledge of environmental contamination in lamprey. The geographic scope of this synthesis is worldwide. We conclude that, in general, the environmental contaminant concentrations that have been experienced by lamprey in the wild appear to be nonlethal to lamprey. However, environmental contaminants exert sublethal effects on lamprey. Sea lamprey ( Petromyzon marinus ) and Pacific lamprey ( Entosphenus tridentatus ) are relatively high in total mercury (Hg) concentration compared with other fishes. Compared with other top predators, lamprey are relatively low in polychlorinated biphenyl (PCB) concentration and concentrations of organochlorine pesticides. We also conclude that regulations on the use of PCBs, beginning in the 1970s, were effective in dramatically reducing PCB concentration in lamprey since the 1970s. Emerging contaminants, such as pharmaceuticals, microplastics, and per- and polyfluorinated alkyl substances (PFAS), have yet to be studied in lamprey.

Journal of Great Lakes Research↗

Fire and tree death: Understanding and improving modeling of fire-induced tree mortality

Each year wildland fires kill and injure trees on millions of forested hectares globally, affecting plant and animal biodiversity, carbon storage, hydrologic processes, and ecosystem services. The underlying mechanisms of fire-caused tree mortality remain poorly understood, however, limiting the ability to accurately predict mortality and develop robust modeling applications, especially under novel future climates. Virtually all post-fire tree mortality prediction systems are based on the same underlying empirical model described in Ryan and Reinhardt (1988 Can. J. For. Res. 18 1291–7), which was developed from a limited number of species, stretching model assumptions beyond intended limits. We review the current understanding of the mechanisms of fire-induced tree mortality, provide recommended standardized terminology, describe model applications and limitations, and conclude with key knowledge gaps and future directions for research. We suggest a two-pronged approach to future research: (1) continued improvements and evaluations of empirical models to quantify uncertainty and incorporate new regions and species and (2) acceleration of basic, physiological research on the proximate and ultimate causes of fire-induced tree mortality to incorporate processes of tree death into models. Advances in both empirical and process fire-induced tree modeling will allow creation of hybrid models that could advance understanding of how fire injures and kills trees, while improving prediction accuracy of fire-driven feedbacks on ecosystems and landscapes, particularly under novel future conditions.

Environmental Research Letters↗

Evidence of glacial activity during MIS 4 in the Rocky Mountains, Colorado, USA

The Ziegler Reservoir fossil site near Snowmass Village, Colorado, provides a rare opportunity to examine environmental conditions in the Rocky Mountains during marine isotope stage (MIS) 4 (71–57 ka). Although recognized as a global-scale cold event, MIS 4 is typically absent from Rocky Mountain glacial chronologies because the geologic evidence was covered or destroyed during the subsequent, and more extensive, MIS 2 (Pinedale; 29–14 ka) glaciation. Ziegler Reservoir lies beyond the Pinedale glacial extent, which allowed for the preservation of a long-lived sequence of eolian sediments deposited in a lacustrine environment that spans from late MIS 6 (ca. 140 ka) through early MIS 3 (ca. 55 ka). Sediments dating to MIS 4 exhibit a significant increase in clay-sized particles, suggesting that the source areas, most likely nearby glacio-fluvial deposits, were enriched with fine-grained material at that time. We hypothesize that the elevated clay content was the result of rock flour production by nearby valley glaciers that were active in the Rocky Mountains during MIS 4. The results of our study illustrate how recognizing indirect evidence of glacial activity can result in a more complete record of past climate conditions than what could be achieved by the study of moraines alone.

Colorado↗

Evidence for millennial-scale climate change during marine isotope stages 2 and 3 at Little Lake, Western Oregon, U.S.A.

Pollen and geochemical data from Little Lake, western Oregon, suggest several patterns of millennial-scale environmental change during marine isotope stage (MIS) 2 (14,100-27,600 cal yr B.P.) and the latter part of MIS 3 (27,600-42,500 cal yr B.P.). During MIS 3, a series of transitions between warm- and cold-adapted taxa indicate that temperatures oscillated by ca. 2??-4??C every 1000-3000 yr. Highs and lows in summer insolation during MIS 3 are generally associated with the warmest and coldest intervals. Warm periods at Little Lake correlate with warm sea-surface temperatures in the Santa Barbara Basin. Changes in the strength of the subtropical high and the jet stream may account for synchronous changes at the two sites. During MIS 2, shifts between mesic and xeric subalpine forests suggest changes in precipitation every 1000-3000 yr. Increases in Tsuga heterophylla pollen at 25,000 and 22,000 cal yr B.P. imply brief warmings. Minimum summer insolation and maximum global ice-volumes during MIS 2 correspond to cold and dry conditions. Fluctuations in precipitation at Little Lake do not correlate with changes in the Santa Barbara Basin and may be explained by variations in the strength of the glacial anticyclone and the position of the jet stream. ?? 2001 University of Washington.

Quaternary Research↗

A decade of monitoring micropollutants in urban wet-weather flows: What did we learn?

Urban wet-weather discharges from combined sewer overflows (CSO) and stormwater outlets (SWO) are a potential pathway for micropollutants (trace contaminants) to surface waters, posing a threat to the environment and possible water reuse applications. Despite large efforts to monitor micropollutants in the last decade, the gained information is still limited and scattered. In a metastudy we performed a data-driven analysis of measurements collected at 77 sites (683 events, 297 detected micropollutants) over the last decade to investigate which micropollutants are most relevant in terms of 1) occurrence and 2) potential risk for the aquatic environment, 3) estimate the minimum number of data to be collected in monitoring studies to reliably obtain concentration estimates, and 4) provide recommendations for future monitoring campaigns. We highlight micropollutants to be prioritized due to their high occurrence and critical concentration levels compared to environmental quality standards. These top-listed micropollutants include contaminants from all chemical classes (pesticides, heavy metals, polycyclic aromatic hydrocarbons, personal care products, pharmaceuticals, and industrial and household chemicals). Analysis of over 30,000 event mean concentrations shows a large fraction of measurements (> 50%) were below the limit of quantification, stressing the need for reliable, standard monitoring procedures. High variability was observed among events and sites, with differences between micropollutant classes. The number of events required for a reliable estimate of site mean concentrations (error bandwidth of 1 around the “true" value) depends on the individual micropollutant. The median minimum number of events is 7 for CSO (2 to 31, 80%-interquantile) and 6 for SWO (1 to 25 events, 80%-interquantile). Our analysis indicates the minimum number of sites needed to assess global pollution levels and our data collection and analysis can be used to estimate the required number of sites for an urban catchment. Our data-driven analysis demonstrates how future wet-weather monitoring programs will be more effective if the consequences of high variability inherent in urban wet-weather discharges are considered.

Water Research↗

Ocean acidification in the Gulf of Mexico: Drivers, impacts, and unknowns

Ocean acidification (OA) has resulted in global-scale changes in ocean chemistry, which can disturb marine organisms and ecosystems. Despite its extensively populated coastline, many marine-dependent communities, and valuable economies, the Gulf of Mexico (GOM) remains a relatively understudied region with respect to acidification. In general, the warm waters of the GOM are better buffered from acidification compared to higher latitude seas, yet long-term acidification has been documented in several GOM regions. OA within the GOM is recognized as spatially variable, particularly within the coastal zone where numerous physical and biogeochemical processes contribute to carbonate chemistry dynamics. The historical progression of OA within the entire GOM is difficult to assess because only a few dedicated long-term monitoring sites have recently been established, and full-water column observations are limited. However, environmental drivers on smaller scales that affect GOM acidification were found to include freshwater, nutrient, and carbonate discharge from large rivers; ocean warming, circulation and residence times; and episodic extreme weather events. GOM marine ecosystems provide essential services, including coastline protection and carbon dioxide removal, and habitats for many marine species that are economically and ecologically important. However, organismal and ecosystem responses to OA are not well constrained for the GOM due to a lack of studies examining the specific effects of OA on regionally relevant species under contemporary and projected conditions. Tackling the vast number of remaining scientific unknowns in this region can be best coordinated through regional capacity networks, such as the Gulf of Mexico Coastal Acidification Network (GCAN), working to achieve a system-wide understanding of Gulf OA and its impacts. Here we synthesize the current peer-reviewed literature on GOM acidification across the ocean-estuarine continuum and identify critical knowledge, research, and monitoring gaps that require future attention.

Progress in Oceanography↗

Observations and modeling of seismic background noise

The preparation of this report had two purposes. One was to present a catalog of seismic background noise spectra obtained from a worldwide network of seismograph stations. The other purpose was to refine and document models of seismic background noise that have been in use for several years. The second objective was, in fact, the principal reason that this study was initiated and influenced the procedures used in collecting and processing the data. With a single exception, all of the data used in this study were extracted from the digital data archive at the U.S. Geological Survey's Albuquerque Seismological Laboratory (ASL). This archive dates from 1972 when ASL first began deploying digital seismograph systems and collecting and distributing digital data under the sponsorship of the Defense Advanced Research Projects Agency (DARPA). There have been many changes and additions to the global seismograph networks during the past twenty years, but perhaps none as significant as the current deployment of very broadband seismographs by the U.S. Geological Survey (USGS) and the University of California San Diego (UCSD) under the scientific direction of the IRIS consortium. The new data acquisition systems have extended the bandwidth and resolution of seismic recording, and they utilize high-density recording media that permit the continuous recording of broadband data. The data improvements and continuous recording greatly benefit and simplify surveys of seismic background noise. Although there are many other sources of digital data, the ASL archive data were used almost exclusively because of accessibility and because the data systems and their calibration are well documented for the most part. Fortunately, the ASL archive contains high-quality data from other stations in addition to those deployed by the USGS. Included are data from UCSD IRIS/IDA stations, the Regional Seismic Test Network (RSTN) deployed by Sandia National Laboratories (SNL), and the TERRAscope network deployed by the California Institute of Technology in cooperation with other institutions. A map showing the approximate locations of the stations used in this study is provided in Figure 1. One might hope for a better distribution of stations in the southern hemisphere, especially Africa and South America, in order to look for regional variations in seismic noise (apart from the major differences between continental, coastal and island sites). Unfortunately, anyone looking for subtle regional variations in seismic noise is probably going to be disappointed by the spectral data presented in this report because much of the station data appear to be dominated by local disturbances caused by instrumental, environmental, cultural, or surf noise. Better instruments and better instrument siting, or a well-funded field program, will be needed before a global isoseismal noise map can be produced. However, by assembling a composite of background noise from a large network of stations, many of the local station variables are masked, and it is possible to create generalized spectral plots of Earth noise for hypothetical quiet and noisy station sites.

Open-File Report↗

Status and trends of Caribbean coral reefs: 1970-2012

This it the 9th status report since the Global Coral Reef Monitoring Network (GCRMN) was founded in 1995 was the data arm of the International Coral Reef Initiative (ICRI) to document the ecological condition or corral reefs, strengthen monitoring efforts, and link existing organizations and people working on reefs worldwide. The US Government provided the initial funding to help set up a global network of coral reef workers and has continued to provide core support. Since then, the series of reports have aimed to present the current status of coral reefs of the world or particular regions, the major threats to reefs and their consequences, and any initiative undertaken under the auspices of ICRI or other bodies to arrest or reverse the decline of coral reefs. IUCN assumed responsibility for hosting the global coordination of the GCRMN in 2010 under the scientific direction of Jeremy Jackson with the following objectives: 1. Document quantitatively the global status and trends for corals, macroalgae, sea urchins, and fishes based on available data from individual scientists as well as the peer reviewed scientific literature, monitoring programs, and report. 2. Bring together regional experts in a series of workshops to involve them in data compilation, analysis, and synthesis. 3. Integrate coral reef status and trends with independent environmental, management, and socioeconomic data to better understand the primary factors responsible for coral reef decline, the possible synergies among factors that may further magnify their impacts, and how these stresses may be more effectively alleviated. Work with GCRMN partners to establish simple and practical standardized protocols for future monitoring and assessment. Disseminate information and results to help guide member state policy and actions. The overarching objective is to understand why some reefs are much healthier than others, to identify what kinds of actions have been particularly beneficial or harmful, and to vigorously communicate results in simple and straightforward terms to foster more effective conservation and management. This and subsequent reports will focus on separate biogeographic regions in a stepwise fashion and combine all of the results for a global synthesis in the coming years. We began in the wide Caribbean region because the historical data are so extensive and to refine methods of analysis before moving on to other regions. This report documents quantitative trends for Caribbean reef corals, macroalgae, sea urchins, and fishes based on data from 90 reef locations over the past 43 tears. This is the first report to combine all these disparate kinds of data in a single place to explore how the different major components of coral reef ecosystems interact on a broadly regional oceanic scale. We obtained data from more than 35,000 ecological surveys carried out by 78 principal investigators (PIs) and some 200 colleagues working in 34 countries, states, and territories throughout the wide Caribbean region. We conducted two workshops in Panama and Brisbane, Australia to bring together people who provided the data to assist in data quality control, analysis, and synthesis. The first workshop at the Smithsonian Tropical Research Institute (STRI) in the Republic of Panama 29 April to 5 May, 2012 included scientists from 18 countries and territories to verify and expand the database and to conduct exploratory analyses of status and trends. Preliminary results based on the Panama workshop were presented to the DC Marine Community and Smithsonian Institution Senate of Scientists in May 2012 and at the International Coral Reef Symposium (ICRS) and annual ICRI meeting in Cairns, Australia in July 2012. The second workshop in Brisbane, Australia in December 2012 brought together eight coral reef scientists for more detailed data analysis and organization of results for this report and subsequent publications. Subsequent presentations to solicit comments while the report was being finalized were made in 2013-2014 at the ICRI General meeting in Belize, the biennial meeting of the Association of Island Marine Laboratories in Jamaica, the Panamerican Coral Reef Congress in Merida, Mexico, the annual meeting of he Western Society of Naturalists, and numerous universities in Costa Rica, the USA and Europe. The main body of the report is in two sections. Part I provides an overview of overall status and trends and detailed analyses of the multiple factors responsible for the decline of reef corals throughout the entire wider Caribbean region. The editors are grateful to all the people who have so generously provided data and expertise, but we assume responsibility for the many statements, conclusions and recommendations and final wording of the text. Part II provides a more detailed analysis of the status and trends of coral reef ecosystems in the 32 countries, states, and territories for which we have data. The format includes maps indicating all locations sampled, a detailed table of data sources and sites surveyed, timelines of ecologically important evens, and relevant references. Each of these reports was compiled in consultation with local experts and all those who provided data and advice are listed as authors of each country report.

Report↗

Mercury in soils of the conterminous United States: Patterns and pools

Soils account for the largest global mercury reservoirs, but observations are sparse in many regions. The accumulation and turnover of mercury in soils determines whether they act as an atmospheric source or sink. Here, we present a spatial analysis of soil mercury from a large soil survey (three horizons, ∼4800 sites) across the conterminous United States conducted by the U.S. Geological Survey. Soil mercury pools were calculated for 11 layers, cumulatively representing the top 1 m of soil, and totaling 158 ± 2 Gg (±SD) of mercury (20.3 ± 0.2 mg m −2 ). Mercury areal density was greatest in mixed forest (27.3 ± 0.5 mg m −2 ), cropland (25.3 ± 0.3 mg m −2 ), and deciduous forest (25.6 ± 0.5 mg m −2 ) ecosystems and lowest in barren (13.5 ± 0.3 mg m −2 ) and shrubland (12.6 ± 0.2 mg m −2 ) ecosystems. Assessment of the provenance of soil mercury using bedrock titanium normalization suggests that 62%–95% of soil mercury is unexplained by parental sources.

conterminous United States↗

Mars Color Imager (MARCI) on the Mars Climate Orbiter

The Mars Color Imager, or MARCI, experiment on the Mars Climate Orbiter (MCO) consists of two cameras with unique optics and identical focal plane assemblies (FPAs), Data Acquisition System (DAS) electronics, and power supplies. Each camera is characterized by small physical size and mass (∼6×6×12 cm, including baffle; <500 g), low power requirements (<2.5 W, including power supply losses), and high science performance (1000×1000 pixel, low noise). The Wide Angle (WA) camera will have the capability to map Mars in five visible and two ultraviolet spectral bands at a resolution of better than 8 km/pixel under the worst case downlink data rate. Under better downlink conditions the WA will provide kilometer-scale global maps of atmospheric phenomena such as clouds, hazes, dust storms, and the polar hood. Limb observations will provide additional detail on atmospheric structure at 1/3 scale-height resolution. The Medium Angle (MA) camera is designed to study selected areas of Mars at regional scale. From 400 km altitude its 6° FOV, which covers ∼40 km at 40 m/pixel, will permit all locations on the planet except the poles to be accessible for image acquisitions every two mapping cycles (roughly 52 sols). Eight spectral channels between 425 and 1000 nm provide the ability to discriminate both atmospheric and surface features on the basis of composition. The primary science objectives of MARCI are to (1) observe Martian atmospheric processes at synoptic scales and mesoscales, (2) study details of the interaction of the atmosphere with the surface at a variety of scales in both space and time, and (3) examine surface features characteristic of the evolution of the Martian climate over time. MARCI will directly address two of the three high-level goals of the Mars Surveyor Program: Climate and Resources. Life, the third goal, will be addressed indirectly through the environmental factors associated with the other two goals.

Journal of Geophysical Research E: Planets↗

Climatic variability as a principal driver of primary production in the southernmost subalpine Rocky Mountain lake

Mountain lakes are sensitive indicators of anthropogenically driven global change, with lake sediment records documenting increased primary production during the twentieth century. Atmospheric nutrient deposition and warming have been attributed to changes in other Western mountain lakes, however, the intensity of these drivers varies. We analyzed a sediment core representing a 270-year record from Santa Fe Lake, New Mexico, to constrain the southern margin of Rocky Mountain lakes and quantify patterns of change in lake biogeochemistry, production, and diatoms since 1750. Lake sediments were dated using 210 Pb and analyzed for carbon (C), nitrogen (N), stable isotopes (δ 13 C, δ 15 N), diatoms, and phototrophic pigments. The abundance of cyanobacteria, purple sulfur-reducing bacteria, and diatom pigments were elevated during the stable conditions of the Little Ice Age; these phototrophic groups declined in the late 1800s and reached a minimum by 1950. From 1950 to 2020, sediments recorded an increased abundance of cryptophyte, diatom, and chlorophyte groups. The C and N (percentage dry mass) increased after 1950, whereas δ 15 N and δ 13 C values declined. Changes since the mid-twentieth century are contemporaneous with warming trends in the Southwest and modest deposition of atmospheric N. Our findings highlight the geographic variability of mountain lake responses to changing environmental conditions.

New Mexico↗

Re-Occupancy of Breeding Territories by Ferruginous Hawks in Wyoming: Relationships to Environmental and Anthropogenic Factors

Grassland and shrubland birds are declining globally due in part to anthropogenic habitat modification. Because population performance of these species is also influenced by non-anthropogenic factors, it is important to incorporate all relevant ecological drivers into demographic models. We used design-based sampling and occupancy models to test relationships of environmental factors that influence raptor demographics with re-occupancy of breeding territories by ferruginous hawks ( Buteo regalis ) across Wyoming, USA, 2011–2013. We also tested correlations of territory re-occupancy with oil and gas infrastructure—a leading cause of habitat modification throughout the range of this species of conservation concern. Probability of re-occupancy was not related to any covariates we investigated in 2011, had a strong negative relationship with cover of sagebrush ( Artemisia spp.) in 2012, was slightly higher for territories with artificial platforms than other nest substrates in 2013, and had a positive relationship with abundance of ground squirrels ( Urocitellus spp.) that was strong in 2012 and weak in 2013. Associations with roads were weak and varied by year, road-type, and scale: in 2012, re-occupancy probability had a weak positive correlation with density of roads not associated with oil and gas fields at the territory-scale; however, in 2013 re-occupancy had a very weak negative correlation with density of oil and gas field roads near nest sites (≤500 m). Although our results indicate re-occupancy of breeding territories by ferruginous hawks was compatible with densities of anthropogenic infrastructure in our study area, the lack of relationships between oil and gas well density and territory re-occupancy may have occurred because pre-treatment data were unavailable. We used probabilistic sampling at a broad spatial extent, methods to account for imperfect detection, and conducted extensive prey sampling; nonetheless, future research using before-after-control-impact designs is needed to fully assess impacts of oil and gas development on ferruginous hawks.

Wyoming↗

Monitoring breeding and survival of ring-necked pheasant (Phasianus colchicus) in the Sacramento Valley, Sacramento-San Joaquin River Delta, and Klamath Basin, northern California—Five-year summary, 2013–17

The U.S. Geological Survey Western Ecological Research Center, Pheasants Forever, Mandeville Island Duck Club, and the California Department of Fish and Wildlife collaborated in a reconnaissance study to monitor populations of ring-necked pheasant ( Phasianus colchicus ) using radio-telemetry in the Sacramento Valley, Sacramento-San Joaquin River Delta, and Klamath Basin of northern California. The purpose of this study was to provide agencies and private landowners with a framework of decision-support tools to help manage pheasant populations in California. During winter, spring, and autumn of 2013–17, we radio- or Global Positioning System-marked 227 female pheasant across six study sites. Data collection was focused on investigating nest-site and brood-rearing habitat selection, examining avian predator composition, and estimating population vital rates to improve our understanding of pheasant population dynamics and to identify factors that may contribute to decreases in pheasant populations in California. The cumulative annual adult survival probability across all sites during 2013–17 was 27.6 percent (95-percent confidence interval [CI], 21.9–33.6), and the cumulative nest and brood survival probabilities were 34.5 percent (95-percent CI, 27.0–42.2) and 54.2 percent (95-percent CI, 43.7–63.5), respectively. Evidence from microhabitat surveys completed at nest-sites, brood locations, and random locations suggested that marked female pheasant tended to select increasing vertical cover and residual vegetation cover and tended to avoid areas of increasing bare ground cover regardless of life-history stage. However, females at nest-sites selected increasing grass cover and height, whereas brood-rearing females tended to select increasing forb cover and height. Only perennial grass cover and perennial grass height were shown to have a positive influence on nest survival, which suggests that increasing perennial grass cover in areas occupied by pheasant may increase nest survival. Analysis of environmental factors linked to vital rate information are ongoing and will continue with investigations at increased spatial scales (that is, macro-habitat) to develop integrated population models that can incorporate abundance estimates from crow count data with vital rates from telemetry data. This report includes results from 5 years of data collection and should be interpreted with caution, as these findings are preliminary.

California↗

Toward more realistic projections of soil carbon dynamics by Earth system models

Soil carbon (C) is a critical component of Earth system models (ESMs), and its diverse representations are a major source of the large spread across models in the terrestrial C sink from the third to fifth assessment reports of the Intergovernmental Panel on Climate Change (IPCC). Improving soil C projections is of a high priority for Earth system modeling in the future IPCC and other assessments. To achieve this goal, we suggest that (1) model structures should reflect real-world processes, (2) parameters should be calibrated to match model outputs with observations, and (3) external forcing variables should accurately prescribe the environmental conditions that soils experience. First, most soil C cycle models simulate C input from litter production and C release through decomposition. The latter process has traditionally been represented by first-order decay functions, regulated primarily by temperature, moisture, litter quality, and soil texture. While this formulation well captures macroscopic soil organic C (SOC) dynamics, better understanding is needed of their underlying mechanisms as related to microbial processes, depth-dependent environmental controls, and other processes that strongly affect soil C dynamics. Second, incomplete use of observations in model parameterization is a major cause of bias in soil C projections from ESMs. Optimal parameter calibration with both pool- and flux-based data sets through data assimilation is among the highest priorities for near-term research to reduce biases among ESMs. Third, external variables are represented inconsistently among ESMs, leading to differences in modeled soil C dynamics. We recommend the implementation of traceability analyses to identify how external variables and model parameterizations influence SOC dynamics in different ESMs. Overall, projections of the terrestrial C sink can be substantially improved when reliable data sets are available to select the most representative model structure, constrain parameters, and prescribe forcing fields.

Global Biogeochemical Cycles↗

Investigating permafrost carbon dynamics in Alaska with artificial intelligence

Positive feedbacks between permafrost degradation and the release of soil carbon into the atmosphere impact land–atmosphere interactions, disrupt the global carbon cycle, and accelerate climate change. The widespread distribution of thawing permafrost is causing a cascade of geophysical and biochemical disturbances with global impacts. Currently, few earth system models account for permafrost carbon feedback (PCF) mechanisms. This research study integrates artificial intelligence (AI) tools and information derived from field-scale surveys across the tundra and boreal landscapes in Alaska. We identify and interpret the permafrost carbon cycling links and feedback sensitivities with GeoCryoAI, a hybridized multimodal deep learning (DL) architecture of stacked convolutionally layered, memory-encoded recurrent neural networks (NN). This framework integrates in-situ measurements and flux tower observations for teacher forcing and model training. Preliminary experiments to quantify, validate, and forecast permafrost degradation and carbon efflux across Alaska demonstrate the fidelity of this data-driven architecture. More specifically, GeoCryoAI logs the ecological memory and effectively learns covariate dynamics while demonstrating an aptitude to simulate and forecast PCF dynamics—active layer thickness (ALT), carbon dioxide flux (CO 2 ), and methane flux (CH 4 )—with high precision and minimal loss (i.e. ALT RMSE : 1.327 cm [1969–2022]; CO 2 RMSE : 0.697 µ molCO 2 m −2 s −1 [2003–2021]; CH 4 RMSE : 0.715 nmolCH 4 m −2 s −1 [2011–2022]). ALT variability is a sensitive harbinger of change, a unique signal characterizing the PCF, and our model is the first characterization of these dynamics across space and time.

Alaska↗

The greenhouse gas flux and potential global warming feedbacks of a northern macrotidal and microtidal salt marsh

Conversion of wetlands by drainage for agriculture or other anthropogenic activities could have a negative or positive feedback to global warming (GWF). We suggest that a major predictor of the GWF is salinity of the wetland soil (a proxy for available sulfate), a factor often ignored in other studies. We assess the radiative balance of two northern salt marshes with average soil salinities > 20 ppt, but with high (macro-) and low (micro-) tidal amplitudes. The flux of greenhouse gases from soils at the end of the growing season averaged 485 &plusmn; 253 mg m -2 h -1 , 13 &plusmn; 30 &mu;g m -2 h -1 , and 19 &plusmn; 58 &mu;g m -2 h -1 in the microtidal marsh and 398 &plusmn; 201 mg m -2 h -1 , 2 &plusmn; 26 &mu;g m -2 h -1 , and 35 &plusmn; 77 &mu;g m -2 h -1 in the macrotidal marsh for CO 2 , N 2 O, and CH 4 , respectively. High rates of C sequestration mean that loss of these marshes would have a radiative balance of - 981 CO 2 _eq. m -2 yr -1 in the microtidal and - 567 CO 2 _eq. m -2 yr -1 in the macrotidal marsh.

Environmental Research Letters↗