USGS Science⌕ Search

SEARCH · USGS Science

Results for “Processes”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 325 records · Page 18Linked to original sources
USGS2023

Density-dependent processes and population dynamics of native sculpin in a mountain river

Understanding the processes governing population dynamics is important for effective conservation and environmental management. Disentangling the relative role of density-dependent versus density-independent processes on population dynamics is often made difficult by the inability to control for abiotic or biotic factors, but long-term datasets are invaluable in this pursuit. We used a 14-year dataset from the Logan River, Utah, to assess long-term trends in abundance and evidence of density-dependent and density-independent effects on population dynamics of Paiute sculpin ( Cottus beldingii ) across six sites. Additionally, we evaluated the feeding ecology of sculpin over 4 years. Sculpin densities generally increased from upstream to downstream, and the annual per capita rate of increase was negatively and significantly correlated with sculpin density at four of six sites. We observed a negative relationship between total gut content and sculpin density but did not observe a negative relationship between relative condition and density. Sculpin displayed a generalist feeding strategy, and interannual differences in diet composition appeared to be influenced by interannual differences in flow, particularly years with higher magnitude flow. The observed spatial patterns in sculpin abundance throughout the watershed matched those of invasive brown trout ( Salmo trutta ), the top piscivore in the Logan River, and likely represent affinities for the suite of ecological conditions associated with downstream sections of the Logan River. Our results suggest that sculpin populations are regulated largely by density-dependent processes and match those from other studies on sculpin population dynamics including a range of species and habitats that differ vastly in abiotic conditions.

Ecology of Freshwater Fish↗
USGS2013

Use of general purpose graphics processing units with MODFLOW

To evaluate the use of general-purpose graphics processing units (GPGPUs) to improve the performance of MODFLOW, an unstructured preconditioned conjugate gradient (UPCG) solver has been developed. The UPCG solver uses a compressed sparse row storage scheme and includes Jacobi, zero fill-in incomplete, and modified-incomplete lower-upper (LU) factorization, and generalized least-squares polynomial preconditioners. The UPCG solver also includes options for sequential and parallel solution on the central processing unit (CPU) using OpenMP. For simulations utilizing the GPGPU, all basic linear algebra operations are performed on the GPGPU; memory copies between the central processing unit CPU and GPCPU occur prior to the first iteration of the UPCG solver and after satisfying head and flow criteria or exceeding a maximum number of iterations. The efficiency of the UPCG solver for GPGPU and CPU solutions is benchmarked using simulations of a synthetic, heterogeneous unconfined aquifer with tens of thousands to millions of active grid cells. Testing indicates GPGPU speedups on the order of 2 to 8, relative to the standard MODFLOW preconditioned conjugate gradient (PCG) solver, can be achieved when (1) memory copies between the CPU and GPGPU are optimized, (2) the percentage of time performing memory copies between the CPU and GPGPU is small relative to the calculation time, (3) high-performance GPGPU cards are utilized, and (4) CPU-GPGPU combinations are used to execute sequential operations that are difficult to parallelize. Furthermore, UPCG solver testing indicates GPGPU speedups exceed parallel CPU speedups achieved using OpenMP on multicore CPUs for preconditioners that can be easily parallelized.

Ground Water↗
USGS2006

Effects of copper on production of periphyton, nitrogen fixation and processing of leaf litter in a Sierra Nevada, California, stream

1 Production of periphyton, nitrogen fixation and processing of leaf litter were examined in an oligotrophic Sierra Nevada stream and the responses of these processes to copper (2.5, 5 and 10 μ g 1 -1 Cu T [total filtrable copper]; approximately 12, 25 and 50 ng 1 -1 Cu 2+ ) were determined. 2 Autotrophic and total production were estimated from 3-week accumulations of biomass on artificial substrates. Mean autotrophic production in the control ranged from 0.22 to 0.58 mg C m -2 h -1 in summer-autumn 1979, but declined to 0.08–0.28 mg C m 2 h -1 after peak discharge in summer 1980, apparently due to phosphorus-limited growth. Total production in the control ranged from 0.30 to 0.82 mg C m -2 h -1 in summer-autumn 1979 and from 0.16 to 0,68 mg C m -2 h -1 in 1980. Mean autotrophic productivity, estimated by l4 C-bicarbonate uptake in daylight, ranged from 0.30 to 2.8 mg C m -2 h -1 . 3 Autotrophic productivity was reduced by 57–81% at 2.5 μ g 1 -1 Cu T , 55–96% at 5 μ g 1 -1 Cu T , and 81–100% at 10 μ g 1 -1 CU T , Heterotrophic productivity (based on dark 35 S-sulphate uptake) was inhibited to a lesser extent (28–63% at 2.5 μ g 1 -1 Cu T , 24–84% at 5 μ g 1 -1 Cu T , and 67–92% at 10 μ g 1 -1 Cu T ), The inhibition of autotrophic and heterotrophic productivity persisted through the year of exposure. Production in stream sections previously exposed to 2.5 and 5 μ g 1 -1 Cu T increased to control levels within 4 weeks after dosing, but remained depressed for more than 7 weeks after exposure to 10 μ g 1 -1 Cu T . 4 The specific rate of photosynthesis (mg C mg chlorophyll a -1 h -1 ) of mature periphyton communities declined at all test concentrations of copper, but the rate for periphyton on newly-colonized surfaces did not change. The species composition of benthic algae shifted during exposure to an assemblage more tolerant of copper. Achrtanthes minutissima and Fragilaria crotonensis were the primary replacement species on newly-colonized surfaces. 5 The nitrogenase activity of blue-green algae was low. with controls ranging from 2.4 to 12 nmol C 2 H 2 m -2 h -1 . Nitrogenase activity was inhibited during the initial weeks of exposure by 5 and 10 μ g 1 -1 Cu T . However, after 9 months of exposure, control and copper-treated sections did not differ. 6 The rate of processing of leaf litter, estimated by microbial respiration and nutrient quality of litter of resident riparian woodland taxa, was inhibited at all test concentrations of copper.

California↗
USGS2008

Agricultural management affects evolutionary processes in a migratory songbird

Hay harvests have detrimental ecological effects on breeding songbirds, as harvesting results in nest failure. Importantly, whether harvesting also affects evolutionary processes is not known. We explored how hay harvest affected social and genetic mating patterns, and thus, the overall opportunity for sexual selection and evolutionary processes for a ground-nesting songbird, the Savannah sparrow (Passerculus sandwichensis). On an unharvested field, 55% of females were in polygynous associations, and social polygyny was associated with greater rates of extra-pair paternity (EPP). In this treatment, synchrony explained variation in EPP rates, as broods by more synchronous females had more EPP than broods by asynchronous females. In contrast, on a harvested field, simultaneous nest failure caused by haying dramatically decreased the overall incidence of EPP by increasing the occurrence of social monogamy and, apparently, the ability of polygynous males to maintain paternity in their own nests. Despite increased social and genetic monogamy, these haying-mediated changes in mating systems resulted in greater than twofold increase in the opportunity for sexual selection. This effect arose, in part, from a 30% increase in the variance associated with within-pair fertilization success, relative to the unharvested field. This effect was caused by a notable increase (+110%) in variance associated with the quality of social mates following simultaneous nest failure. Because up to 40% of regional habitat is harvested by early June, these data may demonstrate a strong population-level effect on mating systems, sexual selection, and consequently, evolutionary processes. ?? 2008 The Authors.

Molecular Ecology↗
USGS2007

Living in the branches: Population dynamics and ecological processes in dendritic networks

Spatial structure regulates and modifies processes at several levels of ecological organization (e.g. individual/genetic, population and community) and is thus a key component of complex systems, where knowledge at a small scale can be insufficient for understanding system behaviour at a larger scale. Recent syntheses outline potential applications of network theory to ecological systems, but do not address the implications of physical structure for network dynamics. There is a specific need to examine how dendritic habitat structure, such as that found in stream, hedgerow and cave networks, influences ecological processes. Although dendritic networks are one type of ecological network, they are distinguished by two fundamental characteristics: (1) both the branches and the nodes serve as habitat, and (2) the specific spatial arrangement and hierarchical organization of these elements interacts with a species' movement behaviour to alter patterns of population distribution and abundance, and community interactions. Here, we summarize existing theory relating to ecological dynamics in dendritic networks, review empirical studies examining the population- and community-level consequences of these networks, and suggest future research integrating spatial pattern and processes in dendritic systems.

Ecology Letters↗
USGS2005

Natural attenuation of volatile organic compounds (VOCs) in the leachate plume of a municipal landfill: Using alkylbenzenes as process probes

More than 70 individual VOCs were identified in the leachate plume of a closed municipal landfill. Concentrations were low when compared with data published for other landfills, and total VOCs accounted for less than 0.1% of the total dissolved organic carbon. The VOC concentrations in the core of the anoxic leachate plume are variable, but in all cases they were found to be near or below detection limits within 200 m of the landfall. In contrast to the VOCs, the distributions of chloride ion, a conservative tracer, and nonvolatile dissolved organic carbon, indicate little dilution over the same distance. Thus, natural attentuation processes are effectively limiting migration of the VOC plume. The distribution of C2-3-benzenes, paired on the basis of their octanol-water partition coefficients and Henry's law constants, were systematically evaluated to assess the relative importance of volatilization, sorption, and biodegradation as attenuation mechanisms. Based on our data, biodegradation appears to be the process primarily responsible for the observed attenuation of VOCs at this site. We believe that the alkylbenzenes are powerful process probes that can and should be exploited in studies of natural attenuation in contaminated ground water systems.

Groundwater↗
USGS2005

Rapid evolution of redox processes in a petroleum hydrocarbon-contaminated aquifer

Ground water chemistry data collected over a six‐year period show that the distribution of contaminants and redox processes in a shallow petroleum hydrocarbon‐contaminated aquifer has changed rapidly over time. Shortly after a gasoline release occurred in 1990, high concentrations of benzene were present near the contaminant source area. In this contaminated zone, dissolved oxygen in ground water was depleted, and by 1994 Fe(lll) reduction and sulfate reduction were the predominant terminal electron accepting processes. Significantly, dissolved methane was below measurable levels in 1994, indicating the absence of significant methanogenesis. By 1996, however, depletion of solid‐phase Fe(lll)‐oxyhydroxides in aquifer sediments and depletion of dissolved sulfate in ground water resulted in the onset of methanogenesis. Between 1996 and 2000, water‐chemistry data indicated that methanogenic metabolism became increasingly prevalent. Molecular analysis of 16S‐rDNA extracted from sediments shows the presence of a more diverse methanogenic community inside as opposed to outside the plume core, and is consistent with water‐chemistry data indicating a shift toward methanogenesis over time. This rapid evolution of redox processes reflects several factors including the large amounts of contaminants, relatively rapid ground water flow (∼0.3 m/day [∼1 foot/day]), and low concentrations of microbially reducible Fe(lll) oxyhydroxides (∼ 1 umol/g) initially present in aquifer sediments. These results illustrate that, under certain hydrologic conditions, redox conditions in petroleum hydrocarbon‐contaminated aquifers can change rapidly in time and space, and that the availability of solid‐phase Fe(lll)‐oxyhydroxides affects this rate of change.

Ground Water↗
USGS2009

How processing digital elevation models can affect simulated water budgets

For regional models, the shallow water table surface is often used as a source/sink boundary condition, as model grid scale precludes simulation of the water table aquifer. This approach is appropriate when the water table surface is relatively stationary. Since water table surface maps are not readily available, the elevation of the water table used in model cells is estimated via a two-step process. First, a regression equation is developed using existing land and water table elevations from wells in the area. This equation is then used to predict the water table surface for each model cell using land surface elevation available from digital elevation models (DEM). Two methods of processing DEM for estimating the land surface for each cell are commonly used (value nearest the cell centroid or mean value in the cell). This article demonstrates how these two methods of DEM processing can affect the simulated water budget. For the example presented, approximately 20% more total flow through the aquifer system is simulated if the centroid value rather than the mean value is used. This is due to the one-third greater average ground water gradients associated with the centroid value than the mean value. The results will vary depending on the particular model area topography and cell size. The use of the mean DEM value in each model cell will result in a more conservative water budget and is more appropriate because the model cell water table value should be representative of the entire cell area, not the centroid of the model cell.

Ground Water↗
USGS2007

Robowell: An automated process for monitoring ground water quality using established sampling protocols

Robowell is an automated process for monitoring selected ground water quality properties and constituents by pumping a well or multilevel sampler. Robowell was developed and tested to provide a cost-effective monitoring system that meets protocols expected for manual sampling. The process uses commercially available electronics, instrumentation, and hardware, so it can be configured to monitor ground water quality using the equipment, purge protocol, and monitoring well design most appropriate for the monitoring site and the contaminants of interest. A Robowell prototype was installed on a sewage treatment plant infiltration bed that overlies a well-studied unconfined sand and gravel aquifer at the Massachusetts Military Reservation, Cape Cod, Massachusetts, during a time when two distinct plumes of constituents were released. The prototype was operated from May 10 to November 13, 1996, and quality-assurance/quality-control measurements demonstrated that the data obtained by the automated method was equivalent to data obtained by manual sampling methods using the same sampling protocols. Water level, specific conductance, pH, water temperature, dissolved oxygen, and dissolved ammonium were monitored by the prototype as the wells were purged according to U.S Geological Survey (USGS) ground water sampling protocols. Remote access to the data record, via phone modem communications, indicated the arrival of each plume over a few days and the subsequent geochemical reactions over the following weeks. Real-time availability of the monitoring record provided the information needed to initiate manual sampling efforts in response to changes in measured ground water quality, which proved the method and characterized the screened portion of the plume in detail through time. The methods and the case study described are presented to document the process for future use.

Ground Water Monitoring and Remediation↗
USGS2011

Maintenance of phenotypic variation: Repeatability, heritability and size-dependent processes in a wild brook trout population

Phenotypic variation in body size can result from within-cohort variation in birth dates, among-individual growth variation and size-selective processes. We explore the relative effects of these processes on the maintenance of wide observed body size variation in stream-dwelling brook trout (Salvelinus fontinalis). Based on the analyses of multiple recaptures of individual fish, it appears that size distributions are largely determined by the maintenance of early size variation. We found no evidence for size-dependent compensatory growth (which would reduce size variation) and found no indication that size-dependent survival substantially influenced body size distributions. Depensatory growth (faster growth by larger individuals) reinforced early size variation, but was relatively strong only during the first sampling interval (age-0, fall). Maternal decisions on the timing and location of spawning could have a major influence on early, and as our results suggest, later (>age-0) size distributions. If this is the case, our estimates of heritability of body size (body length=0.25) will be dominated by processes that generate and maintain early size differences. As a result, evolutionary responses to environmental change that are mediated by body size may be largely expressed via changes in the timing and location of reproduction. Published 2011. This article is a US Government work and is in the public domain in the USA.

Evolutionary Applications↗
USGS2020

A latent process model approach to improve the utility of indicator species

The state of an ecosystem is governed by dynamic biotic and abiotic processes, which can only be partially observed. Costs associated with measuring each component limit the feasibility of comprehensive assessments of target ecosystems. Instead, indicator species are recommended as a surrogate index. While this is an attractive concept, indicator species have rarely proven to be an effective tool for monitoring ecosystems and informing management decisions. One deficiency in the existing theoretical development of indicator species may be overcome with the incorporation of latent (i.e. unobservable) states. Advancements in quantitative ecological models allow for latent‐state models to be tested empirically, facilitating the robust evaluation and practical use of indicator species for ecosystem science and management. Here, we extend the existing conceptual models of indicator species to include a direct relationship between an indicator species, ecosystem change drivers and latent processes and variables. Our approach includes explicit consideration of important estimation uncertainty and narrows the range of values a latent variable may take by relating it to measurable attribute(s) of an indicator species. We demonstrate the utility of this approach by relating a commonly cited indicator species, the red‐backed salamander Plethodon cinereus , to a typical latent process of interest – ecosystem health.

Oikos↗
USGS1996

EDC DAAC: Serving the land processes science community

The primary objective of the Earth Resources Observation System (EROS) Data Center (EDC) Distributed Active Archive Center (DAAC) for land processes data is to promote the interdisciplinary study and understanding of the integrated Earth system by providing remotely sensed and related ancillary data for the study, characterization, and monitoring of natural and anthropogenic conditions and processes existing and operating at or near the land surface. Generating, distributing, and preserving data and products from the National Aeronautics and Space Administration's (NASA) earth observing system (EOS) are primary functions of the DAAC. To that end, the EDC DAAC is using existing data sets in developing capabilities to efficiently and effectively ingest, process, manage, distribute, and archive for future generations land-related data collected by EOS sensors. Capabilities also are being developed to help users search for and acquire data and products, as well as to support their scientific application of those data and products. EDC DAAC programs and capability development activities address DAAC-defined science support requirements that relate to a broad spectrum of services and capabilities needed by science users.

Conference Paper↗
USGS1991

Submarine processes of the middle Atlantic continental rise based on GLORIA imagery

Approximately 6100 km of 3.5-kHz echo-sounding profiles was correlated with a GLORIA side-scan sonar image of the mid-Atlantic United States (34??N, 70??W) lower slope-upper continental rise. The image allows us to map the major erosional and depositional features and to identify major processes that have shaped the area. Interpretation of GLORIA imagery and echo-sounding profiles indicates that mass movement is the predominant process affecting sediment on the United States east coast mid-Atlantic slope and upper rise and that isobath-parallel sediment movement by geostrophic currents is restricted mainly to the lower continental rise. The mass-movement processes evident on the rise probably were most active during the Pleistocene, when sea level was lower and sediment input more active. -from Authors

Geological Society of America Bulletin↗
USGS1980

Sedimentary masses and concepts about tectonic processes at underthrust ocean margins

Tectonic processes associated with subduction of oceanic crust, but unrelated to the collision of thick crustal masses or microplates, are presumed by many geologists to significantly affect the formation and deformation of large sedimentary bodies at underthrust ocean margins. More geologists are familiar with the concept of subduction accretion , which describes the tectonic attachment of rock and sediment masses to the margin's bedrock framework, than with other noncollision processes—for example, sediment subduction, subduction erosion , and subduction kneading . These are equally important processes controlling the geologic evolution of underthrust margins, and any one of them may predominate at a given place.

Geology↗
USGS1993

Acid processing of pre-Tertiary radiolarian cherts and its impact on faunal content and biozonal correlation

The numbers of radiolarians visible in thin sections of chert-rich rocks are commonly an order of magnitude greater than the numbers observed on the surfaces of fragments etched by hydrofluoric acid (HF) and typically orders of magnitude greater than the numbers of individuals found in HF-processed residues. Destruction of radiolarians during both diagenesis and HF processing severely reduces faunal abundance and diversity and affects the taxonomic and biostratigraphic utility of chert residues. The robust forms that survive the processing represent only a small fraction of the death assemblage, and delicate skeletal structures used for species differentiation, commonly preserved in limestone radiolarian faunas, are either poorly preserved or dissolved in many coeval chert residues. First and last occurrences of taxa in chert sequences are likely to be coarse approximations of their true stratigraphic ranges. Precise correlation is difficult between biozonations based solely on index species from cherts and those constructed from limestone faunas. Careful selection of samples in sequence, use of weaker HF solutions, and study of both chert and limestone faunas should yield better biostratigraphic information.

Geology↗
USGS2004

Hydrogeologic processes of large-scale tectonomagmatic complexes in Mongolia-southern Siberia and on Mars

Large-scale tectonomagmatic complexes are common on Earth and Mars. Many of these complexes are created or at least influenced by mantle processes, including a wide array of plume types ranging from superplumes to mantle plumes. Among the most prominent complexes, the Mongolian plateau on Earth and the Tharsis bulge on Mars share remarkable similarities in terms of large domal uplifted areas, great rift canyon systems, and widespread volcanism on their surfaces. Water has also played an important role in the development of the two complexes. In general, atmospheric and surface water play a bigger role in the development of the present-day Mongolian plateau than for the Tharsis bulge, as evidenced by highly developed drainages and thick accumulation of sediments in the basins of the Baikal rift system. On the Tharsis bulge, however, water appears to have remained as ground ice except during periods of elevated magmatic activity. Glacial and periglacial processes are well documented for the Mongolian plateau and are also reported for parts of the Tharsis bulge. Ice-magma interactions, which are represented by the formation of subice volcanoes in parts of the Mongolian plateau region, have been reported for the Valles Marineris region of Mars. The complexes are also characterized by cataclysmic floods, but their triggering mechanism may differ: mainly ice-dam failures for the Mongolian plateau and outburst of groundwater for the Tharsis bulge, probably by magma-ice interactions, although ice-dam failures within the Valles Marineris region cannot be ruled out as a possible contributor. Comparative studies of the Mongolian plateau and Tharsis bulge provide excellent opportunities for understanding surface manifestations of plume-driven processes on terrestrial planets and how they interact with hydro-cryospheres. ?? 2004 Geological Society of America.

Geology↗
USGS2023

Rapid modeling of compound flooding across broad coastal regions and the necessity to include rainfall driven processes: A case study of Hurricane Florence (2018)

In this work, we show that large-scale compound flood models developed for North and South Carolina, USA, can skillfully simulate multiple drivers of coastal flooding as confirmed by measurements collected during Hurricane Florence (2018). Besides the accuracy of representing observed water levels, the importance of individual processes was investigated. We demonstrate that across the area of interest, it is necessary to include marine, pluvial, and fluvial forcing and the processes of wind stress and infiltration to correctly model water levels along the coast and further inland. This work highlights the need to include these processes in modeling coastal compound flooding. By using high-resolution topo-bathymetry that is incorporated via subgrid derived tables in the Super-Fast INundation of CoastS (SFINCS) model, we improved the skill of the model at efficiently simulating flooding across large-scale domains with locally relevant results.

North Carolina, South Carolina↗
USGS2012

Thermally dried ink-jet process for 6,13-bis(triisopropylsilylethynyl)-pentacene for high mobility and high uniformity on a large area substrate

In this study we developed a simple ink-jet process for 6,13-bis(triisopropylsilylethynyl)-pentacene (TIPS-pentacene), which is known as a high-mobility soluble organic semiconductor, to achieve relatively high-mobility and high-uniformity performance for large-area applications. We analyzed the behavior of fluorescent particles in droplets and applied the results to determining a method of controlling the behavior of TIPS-pentacene molecules. The grain morphology of TIPS-pentacene varied depending on the temperature applied to the droplets during drying. We were able to obtain large and uniform grains at 46 degrees C without any "coffee stain". The process was applied to a large-size organic thin-film transistor (OTFT) backplane for an electrophoretic display panel containing 192 x 150 pixels on a 6-in.-sized substrate. The average of mobilities of 36 OTFTs, which were taken from different locations of the backplane, was 0.44 +/- 0.08 cm 2 .V -1 .s -1 , with a small deviation of 20%, over a 6-in.-size area comprising 28,800 OTFTs. This process providing high mobility and high uniformity can be achieved by simply maintaining the whole area of the substrate at a specific temperature (46 degrees C in this case) during drying of the droplets.

Japanese Journal of Applied Physics↗