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At least 307 records · Page 17Linked to original sources
USGS2023

Modeling the effects of interior headland restoration on estuarine sediment transport processes in a marine-dominant estuary

The effects of interior headland restoration on estuarine sediment transport processes were assessed through process-based numerical modeling. Three proposed interior headland restoration scenarios in the Grand Bay estuary (Mississippi/Alabama) were modeled using Delft3D to understand impacts on suspended sediment concentrations, bed level morphology, and sediment fluxes under present-day conditions and a sea level rise (SLR) of 0.5 m, representing a high projection of SLR by the year 2050. Model results showed localized differences in bed levels near the restored features after a year of simulated morphologic change. The restored headland features acted as a sediment source to the immediate surroundings while also providing some non-significant sheltering effect of backshore shoals and marsh shorelines. Sediment fluxes were sensitive to wind directions and the presence of the restored headlands. However, regardless of wind direction, mean sea level, or restoration action, the greatest sediment fluxes were always export fluxes from the estuary, which were further increased with increased sea level. Suspended sediment concentrations were highly influenced by SLR in a non-linear manner. Sediment concentrations both increased and decreased depending on depth under SLR. Furthermore, SLR allowed for the suspension and deposition of sediments on the marsh platform. Overall, the influence of SLR was more impactful to changing sediment dynamics than the influence of the restoration features.

Alabama↗
USGS2023

One byte at a time: Gathering best practices, guidelines, and resources for data standards to support ocean exploration and characterization

Initiated through Presidential direction and now codified, the National Ocean Mapping, Exploration, and Characterization (NOMEC) Council comprises leaders from U.S. federal agencies with a shared goal of mapping all waters of the United States and exploring and characterizing priority areas. The NOMEC Council’s two Interagency Working Groups, Ocean and Coastal Mapping (IWG-OCM) and Ocean Exploration and Characterization (IWG-OEC), both achieved major milestones recently with the 2023 release of the Draft Standard Ocean Mapping Protocols (SOMP) and the 2022 publication of the National Priorities for Ocean Exploration and Characterization. Building on this groundwork, the IWG-OEC is now looking to define and share best practices, guidelines, and resources for ocean exploration and characterization with the long-term goal of increasing community wide standardization to help achieve consistent common practices. First, the IWG-OEC plans to compile federal agency resources and share them in a newly developed online resource repository. The next phase is for the IWG-OEC to create opportunities for non-federal sectors to provide input on developing and populating this repository with additional content (existing standards and protocols, best practice and guidelines documents, etc.). After experts representing multiple sectors are identified, a series of results-oriented workshops are planned to provide input on all aspects of the data, products, and services from exploration and characterization. Finally, the IWG-OEC plans to widely share the online repository of best practices and standard operating procedures. A systematic, transparent, and collaborative process to share standards and protocols can help to enhance the interoperability of data and inform new lines of inquiry, discovery, research, and innovation.

Frontiers in Marine Science↗
USGS2023

Stony coral tissue loss disease accelerated shifts in coral composition and declines in reef accretion potential in the Florida Keys

Outbreaks of coral disease have been a dominant force shaping western Atlantic coral-reef assemblages since the late 1970s. Stony coral tissue loss disease (SCTLD) is nonetheless having an unprecedented impact in the region. Whereas numerous studies over the last decade have worked to characterize this novel pathogen and its impacts on coral populations, few have quantified its functional effects on reef ecosystems. Of particular importance is how SCTLD may be impacting the essential reef-accretion process and the myriad ecosystem services it supports. Here, we evaluated the impact of SCTLD on reef-accretion potential by estimating carbonate budgets and taxon-level carbonate production at 43 sites throughout the Florida Keys from 2016−2022. Average regional reef-accretion potential declined from an already low, but positive rate of 0.30 ± 0.16 mm y -1 (mean ± standard error) in 2016 before the disease was first observed, to a state of accretionary stasis (0.08 ± 0.12 mm y -1 ) by 2022. This 70% relative decline in reef-accretion potential was driven by the loss of reef-building corals, with significant decreases in carbonate production by massive taxa including Colpophyllia natans , Montastraea cavernosa , Pseudodiploria strigosa , Orbicella spp., and Siderastrea siderea , and increasing contributions from less susceptible, weedy taxa including Millepora spp., Agaricia spp., and Porites astreoides . In general, changes in taxon-level carbonate production following the SCTLD outbreak mirror long-term shifts in reef assemblages in response to previous stressors. One striking exception, however, is S. siderea , which had become increasingly dominant in recent decades, but declined significantly in response to SCTLD. Overall, by further decimating the already depauperate reef-building coral populations in the Florida Keys, SCTLD has caused a functionally significant shift in the composition of Florida’s coral-reef assemblages and accelerated the loss of regional reef-building capacity. The dire impacts of the disease in south Florida may serve as an early warning that the persistence of the invaluable ecological and socioeconomic functions coral reefs provide will be increasingly threatened throughout the western Atlantic in the aftermath of SCTLD.

Florida↗
USGS2024

Stable isotopes reveal intertidal fish and crabs use bivalve farms as foraging habitat in Puget Sound, Washington

Bivalves such as oysters and clams have been farmed in intertidal zones across the Puget Sound region of the Salish Sea for thousands of years. The variety of gear types used on bivalve farms creates complex vertical structure and attachment points for aquatic epiphytes and invertebrates which increases habitat structural complexity, but may alter eelgrass cover in areas where bivalve farms and eelgrass meadows overlap. Eelgrass meadows are highly productive and ecologically foundational nearshore habitats that provide valuable ecosystem services including the provision of nursery, refuge, and foraging habitat. Aquaculture has been a key feature of the environment in the Puget Sound for millennia, however, little is known about how well aquaculture practices are integrated into the system, and what services they provide to mobile species assemblages relative to unfarmed eelgrass meadows. We used stable isotope mixing models to estimate, for several species of nearshore fish and crab in two areas of North Puget Sound, Washington, the percent diet originating from either a natural bottom habitat (eelgrass meadows), farm habitat (oyster farms), or pelagic planktonic sources. Our results indicate that several species of nearshore fish such as surf perch and staghorn sculpin derive a significant proportion of their diets from farm areas, while crabs derive most of their diets from eelgrass habitat, and stickleback derive a significant proportion of their diets from planktonic sources. The results indicate that foraging habitat uses are species specific, and that several species that spatially overlap bivalve farms obtained a large percentage of their diets from adjacent bivalve farm habitat.

Washington↗
USGS2024

Variability in coastal habitat available for Longfin Smelt Spirinchus thaleichthys in the northeastern Pacific Ocean

An understanding of oceanographic conditions and processes important to marine animal ecology is fundamental to the development of effective management and conservation actions. Longfin Smelt ( Spirinchus thaleichthys ) is a pelagic forage fish found in coastal and estuarine waters along the Pacific coast of North America from Alaska to central California. Substantial population declines in California’s San Francisco Estuary, where Longfin Smelt are protected under California’s Endangered Species Act, have prompted extensive study of estuarine factors associated with the decline. However, coastal factors that affect up to two-thirds of the Longfin Smelt life cycle are poorly understood and may be important drivers of population dynamics. We compiled coastal observations from numerous sources to estimate the range-wide coastal marine distribution of Longfin Smelt and assess habitat factors affecting distribution in the northeast Pacific Ocean. Based on maximum entropy species distribution models, Longfin Smelt distribution was correlated with depth, distance from the nearest estuary, sea surface temperature, and sea surface chlorophyll. Longfin Smelt were found in shallow, higher productivity coastal waters closer to estuaries, with depth and temperature the most consistent factors influencing distribution. Habitat suitability was highly variable at the southern extent of the range, particularly off the California coast, and was largely driven by habitat contractions associated with warm-water conditions. Study results provide insights into the habitat and range-wide distribution of an at-risk estuarine-reliant forage fish and are the first step toward identifying processes that affect the marine portion of the Longfin Smelt life cycle.

Frontiers in Marine Science↗
USGS2024

Nutrient and carbonate chemistry patterns associated with Karenia brevis blooms in three West Florida Shelf estuaries 2020-2023

Ocean acidification (OA) driven by eutrophication, riverine discharge, and other threats from local population growth that affect the inorganic carbonate system is already affecting the eastern Gulf of Mexico. Long-term declines in pH of ~ -0.001 pH units yr -1 have been observed in many southwest Florida estuaries over the past few decades. Coastal and estuarine waters of southwest Florida experience high biomass harmful algal blooms (HABs) of the dinoflagellate Karenia brevis nearly every year; and these blooms have the potential to impact and be impacted by seasonal to interannual patterns of carbonate chemistry. Sampling was conducted seasonally along three estuarine transects (Tampa Bay, Charlotte Harbor, Caloosahatchee River) between May 2020 and May 2023 to obtain baseline measurements of carbonate chemistry prior to, during, and following K. brevis blooms. Conductivity, temperature and depth data and discrete water samples for K. brevis cell abundance, nutrients, and carbonate chemistry (total alkalinity, dissolved inorganic carbonate (DIC), p CO 2, and pH T were evaluated to identify seasonal patterns and linkages among carbonate system variables, nutrients, and K. brevis blooms. Karenia brevis blooms were observed during six samplings, and highest p CO 2 and lowest pH T was observed either during or after blooms in all three estuaries. Highest average pH and lowest p CO 2 were observed in Tampa Bay. In all three estuaries, average DIC and pH T were higher and p CO 2 was lower during dry seasons than wet seasons. There was strong influence of net community calcification (NCC) and net community production (NCP) on the carbonate system; and NCC : NCP ratios in Tampa Bay, Charlotte Harbor, and the Caloosahatchee River were 0.83, 0.93, and 1.02, respectively. Linear relationships between salinity and dissolved ammonium, phosphate, and nitrate indicate strong influence of freshwater inflow from river input and discharge events on nutrient concentrations. This study is a first step towards connecting observations of high biomass blooms like those caused by K. brevis and alterations of carbonate chemistry in Southwest Florida. Our study demonstrates the need for integrated monitoring to improve understanding of interactions among the carbonate system, HABs, water quality, and acidification over local to regional spatial scales and event to decadal time scales.

Florida↗
USGS2024

Artificial structure selection by economically important reef fishes at North Carolina artificial reefs

Artificial reefs can play an important role in marine fisheries management by supplementing or enhancing natural habitats. Despite their increased use in recent years, the choice of structures used at artificial reefs remains largely haphazard due to the lack of information on reef structure performance. Few studies have examined the use of different artificial reef structures by individual fish. From 2021-2022, we acoustically tagged 72 black sea bass ( Centropristis striata ), 34 gag ( Mycteroperca mircrolepis ), 27 greater amberjack ( Seriola dumerili ), nine almaco jack ( S. rivoliana ), and eight red snapper ( Lutjanus campechanus ) on four artificial reef complexes near Cape Lookout, North Carolina, U.S. Available artificial reef structures consisted of materials of various sizes and heights made of concrete and metal. We tracked tagged fish using a fine-scale positioning system for ~100 days. Black sea bass exhibited high site fidelity to the artificial structure where we caught them, rarely moving away from that structure. The limited movement resulted in low transition probabilities; we conclude that black sea bass do not select for particular artificial structures. Gag and red snapper moved greater distances away from artificial structures and routinely moved between them. Greater amberjack and almaco jack moved the most within the complexes displaying circling behavior around individual structures and were the only species that regularly moved off the artificial reef complexes. Greater amberjack movements away from artificial sites were most commonly directed to surrounding shipwrecks. Whereas gag, red snapper, almaco jack, and greater amberjack used all available structures, they consistently selected for high relief structures, such as vessels, more than other structures. These results will be useful to managers charged with decisions on what types of structures to place at artificial reef complexes to supplement or enhance habitat for economically important fishes.

North Carolina↗
USGS2025

Prevalence of pelagic diatoms and harmful algae in tellinid bivalve diets during record low sea ice in the Pacific Arctic determined by DNA metabarcoding

Understanding changes at the base of the marine food web in the rapidly transforming Arctic is essential for predicting and evaluating ecosystem dynamics. The northern Bering Sea experienced record low sea ice in 2018, followed by the second lowest in 2019, highlighting the urgency of the issue for this region. In this study, we investigated the diet of the clam Macoma calcarea in the Pacific Arctic using DNA metabarcoding, employing 18S and rbcL markers to identify dietary components. Our findings revealed a strong dependence on pelagic diatoms, particularly Chaetoceros sp., with a near absence of ice algae in the clam diet. This pattern reflects the lack of lipid-rich ice algal production during these low sea ice events. Additionally, our analysis detected algae capable of producing harmful toxins, notably Alexandrium dinoflagellates, in the clam diet, underscoring the need for increased monitoring due to potential ecosystem and human health risks. This study demonstrates the utility of DNA metabarcoding in unraveling the complex dynamics of Arctic marine food webs and pelagic-benthic coupling, providing a glimpse of future conditions in a rapidly changing environment.

Bering Sea, Chukchi Sea↗
USGS2025

Assessing the effect of coral reef restoration location on coastal flood hazard along the San Juan Coastline, Puerto Rico

Coastal resilience has become a pressing global issue due to the growing vulnerability of coastlines to the effects of climate change. Nature-based solutions have emerged as a promising approach to coastal protection to not only enhance coastal resilience, but also restore critical ecosystems. Coral reef restoration has the potential to provide ecosystem services benefits; however, there are still key uncertainties in linking restoration design to reductions in coastal flood hazard under current and future climate conditions. In this study, we applied one-dimensional and two-dimensional numerical coastal engineering models, calibrated and validated using field data, to evaluate the effectiveness of coral restoration scenarios on coastal waves, water levels, and flooding along the coast of San Juan, Puerto Rico, U.S.A. Model results indicate a small reduction in maximum water levels under the proposed restoration scenarios. This underscores the importance of these endeavors, not only for ecological preservation but also for preventing further reef deterioration. Such preservation is essential for mitigating the increased coastal risks anticipated in the future. Results from this study provide information to guide policymakers and coastal managers in making informed decisions on viable restoration project design options. By systematically evaluating how restoration location impacts coastal flood hazards, communities can develop and implement proactive strategies to mitigate flood-related risk. In addition, by restoring coral reefs, communities can contribute to environmental preservation while ensuring sustainable development and protection of coastal environments.

Puerto Rico, San Juan coastline↗
USGS2025

Land-based nutrient flux to a fringing reef: Insights from Ofu Island, American Samoa

Submarine groundwater discharge (SGD) is a critical driver of nutrient transport in coral reef ecosystems, shaping water quality, primary productivity, and overall reef health. This study quantifies SGD fluxes and associated nutrient dynamics in two reef flat pools within the Ofu Unit of the National Park of American Samoa: Papaloloa and Fatuana. A multi-method approach integrating unoccupied aerial system-based thermal infrared (UAS-TIR) surveys, radon-based SGD measurements, multichannel electrical resistivity tomography (ERT), and discrete water sampling was used to assess SGD rates and nutrient contributions. UAS-TIR imagery revealed cooler sea surface temperatures in both pools, indicative of SGD, with the higher fluxes observed in Papaloloa. Radon measurements revealed a strong inverse correlation between SGD rates and tidal stage, with a more immediate SGD response at Papaloloa due to its highly permeable calcareous sand and gravel substrate. In contrast, a 2–3-hour lag in SGD response at Fatuana suggests discharge from a more inland aquifer that has lower diffusivity. Nutrient concentrations correlated with temperature and salinity, confirming SGD as the dominant nutrient transport mechanism, whereas isotopic analyses indicated inputs from both groundwater and potential anthropogenic sources. Despite lower SGD flux at Fatuana, higher algal cover suggests additional factors influencing algal proliferation, including substrate availability and hydrodynamic conditions. Excess nutrient inputs from SGD may contribute to algal overgrowth, which threatens Ofu’s thermally tolerant corals by increasing competition for space and light. These findings underscore the complexity of SGD-mediated nutrient dynamics in reef environments and emphasize the need for integrated hydrological and ecological assessments to support effective reef conservation and management strategies.

American Samoa, Ofu Island, Olosega Island↗
USGS2025

Mapping global coral vulnerability to stony coral tissue loss disease: Implications for biosecurity and conservation

Stony Coral Tissue Loss Disease (SCTLD) has devastated Caribbean coral reefs since 2014, but its potential for global impact remains uncertain. We developed predictive models to assess the worldwide vulnerability of coral reefs to SCTLD under different origin and spread hypotheses. Using random forest regression models incorporating coral taxonomy and zooxanthellae clade associations from 52 taxa, we projected SCTLD susceptibility and mortality patterns globally using six indices: Mean susceptibility per genus per location, Summed susceptibilities across genera per location, Summed susceptibilities across genera per realm, Mean mortality per genus per location, Summed mortalities across genera per location, and Summed mortalities across genera per realm. Models demonstrated strong predictive performance (R² = 0.57 for susceptibility; R² = 0.73 for mortality) and revealed that about 7% of coral genera per location are potentially susceptible to SCTLD. While mean susceptibility and mortality per genus were highest in the Tropical Atlantic, the summed susceptibility and mortality across genera were much higher in the biodiverse Central Indo-Pacific. Natural barriers could limit SCTLD’s spread, including the mid-Atlantic gap and the low diversity of the Tropical Eastern Pacific, supporting the contained disease hypothesis. However, the widespread distribution of susceptible genera across coral reef realms indicates significant vulnerability should SCTLD circumvent these barriers through human-mediated transport, particularly via ballast water or the aquarium trade. If SCTLD is an invasive pathogen originating in the Pacific, as shipping patterns for the aquarium trade suggest, mortality in its native range would likely be lower than our projections. These findings point to targeted intervention strategies, including enhanced monitoring at key locations, assessment of biosecurity needs in high-risk areas, and prioritized conservation efforts in vulnerable high-diversity regions to prevent SCTLD from spreading globally.

Frontiers in Marine Science↗
USGS2025

Submarine groundwater discharge creates cold‐water refugia that can mitigate exposure of heat stress in nearshore corals

Coral reef mortality around the world is accelerating due to human activities and rising sea temperatures that cause bleaching, which is expected to become more frequent. Our ability to predict which corals will be most resilient, however, remains limited due to insufficient information characterizing nearshore temperature and habitat conditions. In this study, we examine how submarine groundwater discharge (SGD) reduces nearshore water temperatures and exposure of corals to heat stress, complementing the understanding that SGD can adversely affect coral when it contains elevated nutrient concentrations. Data from fixed nearshore sensors and vertical depth profiles along ~100 km of the western shoreline of the Island of Hawai’i from 2003 to 2014 demonstrate that submarine groundwater discharge (SGD) can reduce nearshore water temperatures by 1 °C–5°C and create estuarine-like conditions with salinities as low as 20 PSU, where the prevalent coral species, Pocillopora meandrina, Porites lobata , and Montipora capitata , thrive. Time-series temperature records reveal that exposure to high ambient ocean temperatures, which are known to initiate bleaching events, are reduced up to 5%–46% of the time. Coral health surveys indicated coral bleaching in response to moderately high annual temperatures in 2010 and 2011, with more colonies affected farther from cold, SGD-fed waters. Synthesis of these results, along with coral response data following the more extreme marine heat wave of 2014–2015, demonstrates lower coral loss and greater coral recovery near groundwater seeps, particularly those with higher flux and influence on reducing nearshore water temperatures. Our results demonstrate that SGD may therefore provide a beneficial ecosystem service and enhance coral reef resilience, particularly where human-related nutrient additions to groundwater can be mitigated. The implications of our findings are relevant across tropical coasts where groundwater inputs can be substantial, such as the Caribbean and Indo-Pacific, and contribute to improving our understanding of coral sensitivity to gradients in temperature and nutrient stress. Improved management of groundwater resources could thus be vital to local–regional strategies for mitigating future heat stress.

Hawaii↗
USGS2025

Apicomplexan and non-metazoan microeukaryotes in the thermosensitive reef-building coral Acropora hyacinthus shift in abundance throughout an extreme coral bleaching event

Coral reefs play vital roles in global marine systems and are currently facing increased threats of bleaching. Coral bleaching is heavily influenced by the host-associated microeukaryote community – most notably the dinoflagellate family Symbiodiniaceae. The apicomplexan family Corallicolidae, is the second most abundant member of the microeukaryote community, yet their role in coral health is largely unknown. To explore the role that this apicomplexan and the greater non-metazoan microeukaryotic community play in coral health, samples of a thermally sensitive scleractinian coral, Acropora hyacinthus , were collected over the course of a severe coral bleaching event and its aftermath. Through 18S rRNA gene sequencing analysis, we found that taxa within the family Corallicolidae were relatively enriched in corals during, and immediately after, the severe bleaching event as compared to before or one year after. Although utilizing 18S rRNA gene sequencing methods is not the standard for Symbiodiniaceae community profiling, we were able to observe symbiont shuffling among the Symbiodiniaceae communities, as the dominant algal symbiont shifted from the genus Cladocopium to the genus Symbiodinium following the bleaching event. Furthermore, the non-metazoan microeukaryote community displayed a general shift towards a state of dysbiosis; evidenced by substantial changes in both microeukaryote community composition and dispersion. These results offer insight into the dynamics of apicomplexans throughout the course of an increasingly common global coral reef stressor.

Mo’orea↗
USGS2025

Biologging to identify nesting and non-nesting emergences for four species of imperiled sea turtles

Quantifying sea turtle nesting behavior is essential for recovery planning and evaluating management actions. Traditional monitoring approaches, based on nest counts from beach surveys, can misclassify non-nesting emergences, obscure true fecundity, and underestimate clutch frequency, metrics that directly influence population models and regulatory decisions. Here, we demonstrate that high-resolution acceleration data loggers (ADLs) can reliably discriminate nesting from non-nesting emergences across four imperiled species of sea turtles at sites in the Gulf of America, southeast USA, and Caribbean. From 60 recovered ADL deployments on green ( Chelonia mydas ; N = 10), hawksbill ( Eretmochelys imbricata ; N = 7), Kemp’s ridley ( Lepidochelys kempii ; N = 21), and loggerhead sea turtles ( Caretta caretta ; N = 22) lasting on average 17.5 ± 8.7 days (range 2–43 days), we identified 54 nesting events and 76 non-nesting emergences, with >97% accuracy when compared to direct observations. These data provide the first observer-validated, species-specific behavioral signatures of nesting phases and reveal correlations between egg-laying duration and clutch size. All non-nesting emergences occurred within 72 hours of subsequent nesting, allowing managers to anticipate nest deposition windows. By refining inter-nesting intervals and fecundity estimates, ADLs offer a practical path to reduce error in clutch frequency estimates. The integration of ADL-derived algorithms with satellite-transmitting tags would enable the remote, real-time monitoring of nesting activity, creating a system for the remote monitoring of inter-nesting intervals and nest fecundity that are crucial to quantify the impacts of climate change and other threats to sea turtle nesting habitat.

Alabama, Florida, North Carolina, Texas↗
USGS2026

Widespread reproductive deficits in Chesapeake Bay ospreys

Introduction: Ospreys ( Pandion haliaetus ) are well-known sentinels of aquatic ecosystem health and are indicators of both environmental contaminants and fish stocks. The Chesapeake Bay supports one of the largest osprey breeding populations in the world, but recent studies have documented declining reproductive performance and increasing food stress in some portions of the estuary. Methods: We monitored osprey nests (N = 571) throughout the Chesapeake Bay during the 2024 breeding season and compared breeding metrics between high-salinity (>10 parts per thousand [ppt]) and low-salinity (<5 ppt) study areas. We also compared contemporary breeding performance within four high-salinity sites to historical data collected during the 1980s. Results: Salinity was strongly associated with breeding performance and the likelihood that pairs achieved productivity levels required for population maintenance. All high-salinity study areas functioned as demographic sinks, whereas low-salinity areas functioned as demographic sources. Breeding metrics including the proportion of pairs breeding, clutch size, nesting failure, brood reduction, and nestling loss all suggested greater food stress within high-salinity areas. Temporal comparisons documented substantial declines in reproductive performance between the 1980s and 2024 within high-salinity study sites. High-salinity sites during the 1980s exhibited breeding performance comparable to low-salinity sites in 2024. Discussion: Although several factors may influence osprey productivity within the Chesapeake Bay, we suggest that reduced availability of Atlantic menhaden ( Brevoortia tyrannus ) is a primary driver of poor reproductive performance within high-salinity waters.

Maryland, Virginia↗
USGS2026

Fatal leptospirosis in southern sea otters from Central California: Pathologic findings and detection of Leptospira interrogans

Leptospira interrogans serovar Pomona infections cause periodic outbreaks in California sea lions (CSLs; Zalophus californianus ) and sporadic deaths in phocids. However, the frequency of infection and associated health impacts remain uncharacterized in sympatric threatened southern sea otters (SSOs; Enhydra lutris nereis ), which serve as important sentinels of coastal health. Given the broad impacts of L. interrogans on other marine mammals, our objective was to screen selected SSOs for infection, determine whether leptospirosis contributes to SSO mortality, and describe leptospiral-associated lesions. A retrospective review (2005–2025) identified 19 candidate cases that underwent detailed review, including Leptospira immunohistochemistry (IHC), serology, and polymerase chain reaction (PCR), with a special focus on renal and hepatic lesions. Kidney samples were PCR-positive for 74% (14/19) of suspected cases. For eight of these, DNA sequence-based serogroup typing detected L. interrogans serogroup Pomona. Seven of the 14 PCR-positive leptospirosis cases were classified as fatal based on positive renal IHC and moderate to severe tubulointerstitial nephritis. All fatal cases had anti- L. interrogans serovar Pomona antibody titers ≥1:25,600. The remaining seven PCR-positive cases were considered nonfatal leptospirosis due to minimal and/or unrelated renal lesions and negative IHC. Nonfatal Leptospira -infected cases ranged from seronegative to low positive (1:400) for serovar Pomona. Antibody titers for Leptospira PCR-negative cases were negative. In fatal cases, gross renal changes were often inapparent or characterized by miliary white cortical foci. Renal histologic lesions included tubulointerstitial nephritis, acute tubular necrosis, and suppurative tubulitis with intratubular bacteria, along with positive IHC staining for leptospiral antigen in the lesions. Gross hepatic changes were also inapparent in fatal cases, and histologic lesions were rare, characterized in one animal by hepatocellular dissociation and in two sea otters by limited leptospiral antigen detection by IHC. Most Leptospira -infected sea otters (71%, 10/14) stranded during higher rainfall months in California, suggesting possible land-to-sea transmission from terrestrial hosts. Given these findings, and because L. interrogans serovar Pomona infections have been confirmed in sympatric CSLs and terrestrial mammals from adjacent watersheds, a focused investigation of potential marine and terrestrial disease transmission dynamics could provide new information to reduce SSO mortalities.

California↗
USGS2026

Repeated coral bleaching events have eroded reef accretion potential in the Florida Keys

Coral bleaching is now the primary driver of coral-reef degradation globally, threatening the persistence of coral-reef functions and the invaluable ecosystem services they support. The Florida Keys have been impacted by four severe, regional-scale coral-bleaching events, which occurred in 1997–1998, 2005, 2014–2015, and 2023. Our aim in this study was to quantify the effects of those thermal-stress events on the persistence of coral-reef structures. We leveraged long-term coral-reef monitoring data to quantify the impacts of coral bleaching on coral cover, carbonate production, and reef-accretion potential throughout the Florida Keys from 1996–2024. Our study indicates that coral bleaching drove significant declines of reef-building corals, which successively diminished regional-scale reef-accretion potential (from 1.65 ± 0.33 mm y -1 in 1996) and culminated with a regional-scale transition to net reef erosion (-0.12 ± 0.08 mm y -1 ) following the 2023 event. Coral bleaching was the primary driver of declining reef-building capacity, with the cumulative impacts of the four coral-bleaching events accounting for >75% of total declines since 1996. The 1997–1998 event alone drove ~50% of overall declines, largely due to losses of the shallow-water ecosystem engineer, Acropora palmata . More moderate impacts of thermal stress on regional reef-accretion potential in 2005 (6%) and 2014–2015 (9%) could lend some support to the hypothesis that the remaining corals were more thermally tolerant; however, the unprecedented thermal stress event in 2023 caused widespread coral-bleaching and bleaching-related mortality, and caused an additional 12% of the total decline in reef-accretion potential. Stony-coral tissue loss disease accounted for an additional 6% of the decline, with the remaining 19% unexplained. Coral bleaching has already dramatically reshaped the structure and function of coral reefs in the Florida Keys over the last three decades. With the high likelihood that thermal stress will accelerate moving forward, the persistence of Florida’s essential coral-reef functions and services is uncertain.

Florida↗