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At least 307 records · Page 17Linked to original sources
USGS2017

Holy flux: Spatial and temporal variation in massive pulses of emerging insect biomass from western U.S. rivers

The river stonefly, Pteronarcys californica (aka salmonfly), is an iconic insect in rivers of western North America due to its large size and its support of economically important species like wild trout (Nehring et al. 2011). Their emergence generates a large economic subsidy to local communities, as anglers from around the world travel to western rivers to fish the salmonfly “hatch” (e.g., Willoughby 2013). Salmonflies, which have a 4-yr lifespan in the central Rocky Mountains (Nehring et al. 2011), emerge en masse during 1 week in late spring (Sheldon 1999), and more than 20 terrestrial species, including humans, are known to eat adult salmonflies (Muttkowski 1925, Sutton 1985, Rockwell et al. 2009). How they influence populations of insectivores or the broader river-riparian ecosystem is unknown; this itself is an issue because salmonflies are disappearing from some rivers (Nehring et al. 2011).

Ecology↗
USGS2011

Stream-groundwater interactions

Streams and their surrounding catchments exchange water and solutes on a range of physical scales. Exchange with the stream may extend into the interstitial areas of the streambed, the hyporheic zone, the riparian area, or the catchment's groundwater flow system. Even at the smaller scales, the exchanges significantly influence solute transport, nutrient cycling, and the aquatic ecosystem. Over the recent decades, considerable attention has been given to the solute transport aspects of stream–groundwater interactions. Stream–groundwater interactions are now being recognized as practical matters to be considered in environmental issues, such as stream restoration and fish habitat. In this chapter, the emphasis is on introducing (1) the breadth of hydrologic interactions between streams and groundwater and (2) the importance of interpreting these interactions to understanding stream chemistry and ecology.

Book chapter↗
USGS2020

Cytology reveals diverse cell morphotypes and cellin-cell interactions in normal collector sea urchins Tripneustes gratilla

Echinoderms such as sea urchins are important in marine ecosystems, particularly as grazers, and unhealthy sea urchins can have important ecological implications. For instance, unexplained mortalities of Diadema antillarum in the Caribbean were followed by algal overgrowth and subsequent collapse of coral reef ecosystems. Unfortunately, few tools exist to evaluate echinoderm health, making management of mortalities or other health issues problematic. Hematology is often used to assess health in many animal groups, including invertebrates, but is seldom applied to echinoderms. We used a standard gravitometric technique to concentrate fixed coelomocytes from the collector sea urchin Tripneustes gratilla onto microscope slides, permitting staining and enumeration. Using Romanowsky stain and electron microscopy to visualize cell details, we found that urchin cells could be partitioned into different morphotypes. Specifically, we enumerated phagocytes, phagocytes with perinuclear cytoplasmic dots, vibratile cells, colorless spherule cells, red spherule cells, and red spherule cells with pink granules. We also saw cell-in-cell interactions characterized by phagocytes apparently phagocytizing mainly the motile cells including red spherule cells, colorless spherule cells, and vibratile cells disproportionate to underlying populations of circulating cells. Cell-in-cell interactions were seen in 71% of sea urchins, but comprised <1% of circulating cells. Finally, about 40% of sea urchins had circulating phagocytes that were apparently phagocytizing spicules. The coelomic fluid collection and slide preparation methods described here are simple, field portable, and might be a useful complementary tool for assessing health of other marine invertebrates, revealing heretofore unknown physiological phenomena in this animal group.

Hawaii↗
USGS2015

Managing more than the mean: Using quantile regression to identify factors related to large elk groups

Summary Animal group size distributions are often right-skewed, whereby most groups are small, but most individuals occur in larger groups that may also disproportionately affect ecology and policy. In this case, examining covariates associated with upper quantiles of the group size distribution could facilitate better understanding and management of large animal groups. We studied wintering elk groups in Wyoming, where group sizes span several orders of magnitude, and issues of disease, predation and property damage are affected by larger group sizes. We used quantile regression to evaluate relationships between the group size distribution and variables of land use, habitat, elk density and wolf abundance to identify conditions important to larger elk groups. We recorded 1263 groups ranging from 1 to 1952 elk and found that across all quantiles of group size, group sizes were larger in open habitat and on private land, but the largest effect occurred between irrigated and non-irrigated land [e.g. the 90th quantile group size increased by 135 elk (95% CI = 42, 227) on irrigation]. Only upper quantile group sizes were positively related to broad-scale measures of elk density and wolf abundance. For wolf abundance, this effect was greater on elk groups found in open habitats and private land than those in closed habitats or public land. If we had limited our analysis to mean or median group sizes, we would not have detected these effects. Synthesis and applications . Our analysis of elk group size distributions using quantile regression suggests that private land, irrigation, open habitat, elk density and wolf abundance can affect large elk group sizes. Thus, to manage larger groups by removal or dispersal of individuals, we recommend incentivizing hunting on private land (particularly if irrigated) during the regular and late hunting seasons, promoting tolerance of wolves on private land (if elk aggregate in these areas to avoid wolves) and creating more winter range and varied habitats. Relationships to the variables of interest also differed by quantile, highlighting the importance of using quantile regression to examine response variables more completely to uncover relationships important to conservation and management.

Wyoming↗
USGS2022

Asking nicely: Best practices for requesting data

Compiling disparate datasets into publicly available composite databases helps natural resource communities explore ecological trends and effectively manage across spatiotemporal scales. Though some studies have reported on the database construction phase, fewer have evaluated the data acquisition and distribution process. To facilitate future data sharing collaborations, Louisiana State University surveyed data providers and requestors to understand the characteristics of effective data requests and sharing. Data providers were largely U.S. natural resource agency personnel, and they reported that unclear data requests, privacy issues, and rigid timelines and formats were the greatest barriers toward providing data, but that they were motivated by improving science and collaboration. Data requestors identified challenges such as evolving needs, standardization issues, and insufficient resources (time and funding) as barriers to compiling data for these types of efforts. In a time of big data, open access, and collaboration, significant scientific advances can be made with effective requests and inclusion of data sets into larger and more powerful databases.

Ecological Indicators↗
USGS2021

Effects of variable-density thinning on non-native understory plants in coniferous forests of the Pacific Northwest

Old-growth forests serve as critical habitat for many sensitive species, but management practices have diminished their prevalence, and former regions of old-growth are now dominated by second-growth stands lacking the structural heterogeneity, diversity, and species richness that these older forests possess. In western Washington state in the Pacific Northwest of the United States, the Olympic Habitat Development Study was designed to address this issue and hasten the development of specific old-growth features in second-growth stands using variable-density thinning. One concern with such methods, however, is the potential to introduce non-native plants, which can have negative ecological and economic impacts. Here, we examine how variable-density thinning influences desirable forest characteristics, such as increased plant species diversity, versus the less desirable effects of non-native plant species introduction. We test two hypotheses regarding plant invasions. First, thinning would promote establishment of non-native, shade-intolerant species, but their abundance would gradually decline over time. Second, thinning disturbance and increased heterogeneity of canopy cover would initially promote understory richness of all species, although richness would decline over time with canopy closure and increased cover of shrubs and regenerating trees. We found that the number and cover of non-native species initially increased after thinning, peaking at 16 species present in variable-density thinned treatments in year three. By year 17, 11 species remained throughout the seven 6.5 ha treatment plots sampled, and cover was negligible. As predicted, species richness increased following thinning, however, native species richness remained elevated through year 17, contrary to our hypothesis. Furthermore, native species diversity also increased following thinning and remained higher in thinned treatments than controls through year 17. Our results show that variable-density thinning in temperate coniferous forests can enhance native, but not exotic, plant richness and diversity in the long term.

Washington↗
USGS2022

Projected impact of sea-level rise and urbanization on mottled duck (Anas fulvigula) habitat along the Gulf Coast of Louisiana and Texas through 2100

Coastal wetlands along the Gulf of Mexico support a wide diversity of wildlife, are important nurseries for sport and commercial fisheries, provide erosion and flood control, and serve many other ecological functions and services. These marshes have been declining in area and degrading at alarming rates since the 1930s. Effective conservation planning is vital to protect these ecosystems, but decision makers often lack knowledge of expected future conditions to strategically target conservation actions. To address this issue, we focus on a species of conservation concern, the mottled duck (<i>Anas fulvigula</i>), that resides year-round in the coastal marshes of the Gulf of Mexico. We used location data collected from radiomarked hen mottled ducks from 2006 to 2011 to create an ensemble model of habitat selection for 2010. We then projected future habitat states using models of sea-level rise and human development. By combining future predictions with our ensemble model, we predict future habitat for mottled ducks through 2100, in 20-year time steps beginning with 2020. Sea-level rise models predicted reductions in coastal marsh habitats and our ensemble model predict corresponding declines in overall habitat quantity and quality for mottled ducks, with the largest rate of habitat loss predicted within the Chenier Plain of Louisiana, USA at 71%. In some areas, particularly the Texas Mid-Coast, USA, future urbanization and human development is expected to reduce the ability of wetland habitat to migrate inland with rising sea-levels. Our results also highlight areas of coastal marsh particularly vulnerable to sea-level rise; and conversely, identify areas most likely to persist into the future that could be targeted for habitat conservation to help mottled ducks persist on the landscape.

Louisiana, Texas↗
USGS1995

USGS supports ecosystem management in the San Francisco bay and delta

In the past several years, the Department of the Interior has ,l?laced particular emphasis on "ecosystem management" - the integration of scientific knowledge of ecological relationships with resource management practices to sustain ecological, cultural, and economic systems in broad habitat areas; eg., forest, desert, and aquatic habitats. The goal of ecosystem management is to understand the habitat requirements of many species and thereby assess the impact of a variety of human activities on regional biodiversity rather than to manage for individual species. In support of the management of the natural resources of San Francisco Bay and the delta, the USGS is augmenting its ongoing research program to provide additional research, monitoring, and assessment information and to improve the availability of that information. Following a workshop with resource and regulatory agency representatives, hosted by the USGS in early 1994, USGS researchers identified specific areas where existing and new scientific information could contribute to resolving some of the critical bay and delta land and aquatic management issues. The "ecosystems initiative" effort now underway addresses questions in three areas: Freshwater flow, including sediment and contaminant transport. Wetlands. Information and data access. Following is a brief description of activities being supported by this initiative.

Interagency Ecological Program Newsletter↗
USGS1995

The ecology of cormorants: some research needs and recommendations

Concerns about Double-crested Cormorants (Phalacrocorax auritus) have arisen because of their rapid population increase across North America and their economic impact on several aquaculture and commercial fish industries. In spite of the concern for cormorants, little published research is available that addresses either basic population biology questions or management issues. Based on a literature review, I recommend that research be conducted in four areas. First, a large-scale banding and marking program should be initiated so that population models can be used to estimate age- and sex-specific survival and fecundity (as has been done for the Shag [P. aristotelis] in Europe). By marking individual birds, survival and movement rates can be estimated between nesting colonies, which will provide information about potential source versus sink colonies. Second, studies of movements during migration and winter are required. Presently, no data are available on habitat use during migration or on the length-of-stay by individual birds. This has important implications to how cormorants interact with other fish and wildlife species over a broad range. Studies of movements during winter with radio-marked birds should indicate whether the 'problem birds' at aquaculture sites are merely a few specialists. Third, limiting factors, such as contaminants and disease, should receive further investigation, especially in light of recent concerns over the outbreak of Newcastle disease. The relationship between contaminant levels and developmental abnormalities in young cormorants in certain areas of the Great Lakes in Canada and the United States remains equivocal. Fourth, further studies are needed to document the economic impacts of cormorants on Channel Catfish (Ictalurus punctatus) and other cultured fishes and to determine ways to reduce predation by fish-eating birds. Mesocosm experiments should be conducted to evaluate how different fish extraction rates affect final productivity of fish. Controlled experiments with different exclusion and scaring devices are needed. With radio-marked birds, it should be determined what the behavioral responses are to the different scaring devises. Also, providing alternative wetland feeding sites in regions of fish farm depredation might alleviate some of the pressure on farmers. Studies with radio-marked birds could evaluate effects of manipulation of 'natural' wetlands on use by birds during the winter period. Finally, any research directed at the Double-crested Cormorant should also evaluate its interactions with other fisheating waterbirds.

Book chapter↗
USGS2018

State of the network: Long-term, high-frequency flow and water quality data in the San Francisco Estuary, California

The USGS California Water Science Center is heavily involved in the measurement of flow and water quality parameters in the San Francisco Estuary, with support from many partner agencies. The California Department of Water Resources (DWR), through the Interagency Ecological Program (IEP) is one of those agencies. This article describes the resulting efforts and methodologies and provides examples of some of the uses of the data sets for science and management interests. The DWR/IEP-funded flow and water quality network provides high resolution data in both space and time, over a large portion of the San Francisco Estuary. This measurement network has evolved over the preceding decades, and proven invaluable for both management and science interests, with particular relevance to water supply and endangered species issues. Presented below are a summary of the measurement network, some of the methods being utilized, and some interesting conditions that became evident during the recent drought that spanned Water Years (WY) 2013-2016, and the wet WY2017 (water year spans Oct 1-Sept 30).

California↗
USGS2012

Analysis options for estimating status and trends in long-term monitoring

This chapter describes methods for estimating long-term trends in ecological parameters. Other chapters in this volume discuss more advanced methods for analyzing monitoring data, but these methods may be relatively inaccessible to some readers. Therefore, this chapter provides an introduction to trend analysis for managers and biologists while also discussing general issues relevant to trend assessment in any long-term monitoring program. For simplicity, we focus on temporal trends in population size across years. We refer to the survey results for each year as the “annual means” (e.g. mean per transect, per plot, per time period). The methods apply with little or no modification, however, to formal estimates of population size, other temporal units (e.g. a month), to spatial or other dimensions such as elevation or a north–south gradient, and to other quantities such as chemical or geological parameters. The chapter primarily discusses methods for estimating population-wide parameters rather than studying variation in trend within the population, which can be examined using methods presented in other chapters (e.g. Chapters 7, 12, 20). We begin by reviewing key concepts related to trend analysis. We then describe how to evaluate potential bias in trend estimates. An overview of the statistical models used to quantify trends is then presented. We conclude by showing ways to estimate trends using simple methods that can be implemented with spreadsheets.

Book chapter↗
USGS2016

Conservation of native Pacific trout diversity in western North America

Pacific trout Oncorhynchus spp. in western North America are strongly valued in ecological, socioeconomic, and cultural views, and have been the subject of substantial research and conservation efforts. Despite this, the understanding of their evolutionary histories, overall diversity, and challenges to their conservation is incomplete. We review the state of knowledge on these important issues, focusing on Pacific trout in the genus Oncorhynchus. Although most research on salmonid fishes emphasizes Pacific salmon, we focus on Pacific trout because they share a common evolutionary history, and many taxa in western North America have not been formally described, particularly in the southern extent of their ranges. Research in recent decades has led to the revision of many hypotheses concerning the origin and diversification of Pacific trout throughout their range. Although there has been significant success at addressing past threats to Pacific trout, contemporary and future threats represented by nonnative species, land and water use activities, and climate change pose challenges and uncertainties. Ultimately, conservation of Pacific trout depends on how well these issues are understood and addressed, and on solutions that allow these species to coexist with a growing scope of human influences.

Fisheries↗
USGS2016

Aquatic biodiversity in forests: A weak link in ecosystem services resilience

The diversity of aquatic ecosystems is being quickly reduced on many continents, warranting a closer examination of the consequences for ecological integrity and ecosystem services. Here we describe intermediate and final ecosystem services derived from aquatic biodiversity in forests. We include a summary of the factors framing the assembly of aquatic biodiversity in forests in natural systems and how they change with a variety of natural disturbances and human-derived stressors. We consider forested aquatic ecosystems as a multi-state portfolio, with diverse assemblages and life-history strategies occurring at local scales as a consequence of a mosaic of habitat conditions and past disturbances and stressors. Maintaining this multi-state portfolio of assemblages requires a broad perspective of ecosystem structure, various functions, services, and management implications relative to contemporary stressors. Because aquatic biodiversity provides multiple ecosystem services to forests, activities that compromise aquatic ecosystems and biodiversity could be an issue for maintaining forest ecosystem integrity. We illustrate these concepts with examples of aquatic biodiversity and ecosystem services in forests of northwestern North America, also known as Northeast Pacific Rim. Encouraging management planning at broad as well as local spatial scales to recognize multi-state ecosystem management goals has promise for maintaining valuable ecosystem services. Ultimately, integration of information from socio-ecological ecosystems will be needed to maintain ecosystem services derived directly and indirectly from forest aquatic biota.

California, Oregon, Washington↗
USGS2017

Niobium and tantalum

Niobium and tantalum are transition metals that are almost always found together in nature because they have very similar physical and chemical properties. Their properties of hardness, conductivity, and resistance to corrosion largely determine their primary uses today. The leading use of niobium (about 75 percent) is in the production of high-strength steel alloys used in pipelines, transportation infrastructure, and structural applications. Electronic capacitors are the leading use of tantalum for high-end applications, including cell phones, computer hard drives, and such implantable medical devices as pacemakers. Niobium and tantalum are considered critical and strategic metals based on the potential risks to their supply (because current production is restricted to only a few countries) and the significant effects that a restriction in supply would have on the defense, energy, high-tech industrial, and medical sectors. The average abundance of niobium and tantalum in bulk continental crust is relatively low—8.0 parts per million (ppm) niobium and 0.7 ppm tantalum. Their chemical characteristics, such as small ionic size and high electronic field strength, significantly reduce the potential for these elements to substitute for more common elements in rock-forming minerals and make niobium and tantalum essentially immobile in most aqueous solutions. Niobium and tantalum do not occur naturally as pure metals but are concentrated in a variety of relatively rare oxide and hydroxide minerals, as well as in a few rare silicate minerals. Niobium is primarily derived from the complex oxide minerals of the pyrochlore group ((Na,Ca,Ce) 2 (Nb,Ti,Ta) 2 (O,OH,F) 7 ), which are found in some alkaline granite-syenite complexes (that is, igneous rocks containing sodium- or potassium-rich minerals and little or no quartz) and carbonatites (that is, igneous rocks that are more than 50 percent composed of primary carbonate minerals, by volume). Tantalum is derived mostly from the mineral tantalite ((Fe,Mn)(Ta,Nb) 2 O 6 ), which is found as an accessory mineral in rare-metal granites and pegmatites that are also enriched in lithium and cesium (termed lithium-cesium-tantalum (LCT)-type pegmatites). Brazil and Canada are the leading nations that produce niobium mineral concentrates, but Brazil is by far the leading producer, accounting for about 90 percent of production, which comes mostly from weathered material derived from carbonatites. Brazil and Canada also have the largest identified niobium resources; additional resources, although they are less well reported, occur in Angola, Australia, China, Greenland, Malawi, Russia, and South Africa. Australia and Brazil have been the leading producers of tantalum mineral concentrates, although recently Ethiopia and Mozambique have also been significant suppliers of tantalum. Artisanal mining of columbite-tantalite (also called coltan) is practiced in many countries, particularly Burundi, the Democratic Republic of the Congo (Congo [Kinshasa]), Nigeria, Rwanda, and Uganda. Brazil has about 40 percent of the identified tantalum resources; other countries and regions with identified tantalum resources include, in decreasing order of resources, Australia, Asia, Russia and the Middle East, Africa, North America, and Europe. Identified niobium and tantalum resources in the United States are small, low grade, and difficult to recover and process, and are thus not commercially recoverable at current prices. Consequently, the United States meets its current and expected future needs for niobium and tantalum through imports of primary mineral concentrates and alloys and through recovery from foreign and domestic alloy scrap that contain the metals. Environmentally, the main issues related to niobium and tantalum mining are land disruptions, the volume of waste materials and their disposal, and the radioactivity of some tailings and waste materials that contain thorium and uranium. Because of the relative biological inertness of niobium and tantalum, human and ecological health concerns are generally minimal under most natural conditions. Demand for both niobium and tantalum is expected to increase as the world economy continues to recover from the downturn that began in 2008. Increased demand for niobium is linked to increased consumption of microalloyed steel, which is used in the manufacture of cars, buildings, ships, and refinery equipment. Demand for these steels will likely increase with continued economic development in such countries as Brazil, China, and India. In addition, increased global demand for cars, cell phones, computers, superconducting magnets, and other high-tech devices will likely spur increased demand for both niobium and tantalum. The estimated global reserves and resources of niobium and tantalum are large and appear more than sufficient to meet global demand for the foreseeable future, possibly the next 500 years. The sale of “conflict coltan” attributed to rebel forces waging a civil war in Congo (Kinshasa) has been of recent concern and has highlighted the need for a transparent and traceable global supply chain that can exclude illegal columbite-tantalite from the conventional market while discerning legitimate artisanal mine production in central Africa.

Professional Paper↗
USGS2013

A natural resource condition assessment for Sequoia and Kings Canyon National Parks: Appendix 11a: giant sequoias

For natural resource managers in the southern Sierra Nevada, giant sequoia requires very little introduction. It receives great attention as an icon of western forests and as a common namesake with the areas where it occurs. While it is a single component of a very complex system, its attention in this assessment and in general is well deserved. Giant sequoia is one of the few "destination species" that attracts a wide swath of the public by nature of it simply being present. It draws people, who otherwise may not travel, to a natural environment. The result is an expansion of the public’s sense of natural resource stewardship. Because park managers could not achieve their mission without public support, this fostering role of giant sequoia is critical for park natural resources and is important for natural resources in general. Despite its social relevance and physical size, we re-emphasize here that the giant sequoia resource is a relatively small component of the ecosystems of the southern Sierra Nevada. As is the case with all of the resources assessed in the NRCA, we focus on giant sequoia with the understanding that other resources will be considered simultaneously when evaluating management decisions that impact giant sequoia. While we attempt to explicitly address the interaction of giant sequoia with other resources and stressors, we also realize that ultimately managers will integrate much more information than is presented here when making decisions that influence giant sequoia. The autecology and management issues surrounding giant sequoia have been thoroughly reviewed elsewhere (Harvey et al. 1980, Aune 1994, Stephenson 1996). Stephenson (1996), in particular, should be reviewed when considering any management decisions that potentially impact giant sequoia. For those who may not be familiar with giant sequoia ecology, a summary of basic information is provided in a table below. In some parts of this assessment, we reproduce text from Stephenson’s review because it is still relatively current for addressing some of the stressors. Numerous recent studies reported since 1996 have confirmed and expanded the understanding of giant sequoia, especially in areas related to ecophysiology and the effectiveness of restoration treatments. These recent studies are integrated into this assessment. Additionally, much unpublished work has been done that is useful for establishing baselines and evaluating trends. This work is presented in detail in order to expand upon previous work and to inform the final assessments. Instead of providing an introductory description of giant sequoia distribution and the various landowners who manage groves, we refer readers to the more recent descriptions provided by Stephenson (1996) and Willard (2000). Some of the relevant points from these descriptions with respect to giant sequoia within SEKI and Giant Sequoia National Monument (GSNM) include: - Of the native giant sequoia grove area in SEKI and GSNM approximately 38% is within SEKI and 62% is within GSNM. - 35 of the groves that make up the entire population are all or partially managed by SEKI and 33 are managed by GSNM. - As we have done above, reviewers addressing giant sequoia widely recognize its transcendence beyond an ecologically important species to one with considerable added cultural value.

California↗
USGS2020

Smallmouth buffalo (Ictiobus bubalus) growth across a 1200km human use and ecological disturbance gradient in the Upper Mississippi River System

Smallmouth buffalo (Ictiobus bubalus) is a common and widely distributed large-bodied species of the family Catostomidae. It inhabits large rivers and reservoirs of the eastern continental United States (east of the continental Divide) and is most abundant and common in the large rivers of the Midwest and Central Plains, though it does occur as far north and east as the Hudson Bay drainage and as far south and west as Arizona (Edwards and Twoney 1982). Historically, smallmouth buffalo were an important component of commercial fisheries on both the Mississippi and Illinois Rivers. However, following the introduction of common carp (Cyprinus carpio) in the mid-1800s (Carlander 1954), the construction of a system of navigation dams on Upper Mississippi and Illinois River in the 1930s (USGS 1999), and water quality/pollution issues through the 1980s (Weiner 2010), the role of smallmouth buffalo in the overall UMRS fish community and commercial fishery has generally diminished relative to historical standards. Still, smallmouth buffalo remains an important and valued component of the UMRS commercial fishery. The study area is represented by three study reaches on the Illinois River and three study reaches on the Upper Mississippi River (Figure 1). Collectively, these study reaches represent nearly 1200 river km and exist across strong and pronounced ecological and disturbance gradients. For example, habitat composition, water quality, commercial navigation intensity, aquatic plant prominence, and the number and abundance of nonnative fish species vary strongly across the study domain, with northern Mississippi River reaches exhibiting less navigation traffic, better water quality, markedly greater aquatic plant prominence, more diverse habitat composition, and comparably much smaller numbers of nonnative species than the lower Mississippi River study reach and those on the Illinois River (USGS 1999; Johnson and Hagerty [eds] 2008; Irons et al. 2009). Long term monitoring efforts conducted under the auspices of the Upper Mississippi River Restoration program over the past 27 years have provided tremendous insights into shifts and changes of the overall UMRS fish community (Ickes et al. 2005; Garvey et al. 2010; Schramm and Ickes 2016). However, these monitoring efforts observe only the most basic aspects of the UMRS fish community (i.e., catch, length, weight, distribution, and occurrence). To gain a greater understanding of forces driving community level shifts and changes, more directed study is needed on the functional attributes of fish populations (i.e., growth, mortality, recruitment). Collectively, these functional attributes of populations are termed population dynamics and/or vital rates. It is important to note, the population dynamics of fishes in large rivers is generally poorly understood, especially for non-game species (Ickes 2018). The prevailing view is that abiotic factors largely govern inter-annual population dynamics, typically based upon rather short-term observations and correlations with assorted abiotic river attributes that vary on a seasonal or annual basis (for example, Risotto and Turner 1985). However, the role that longer-term abiotic factors play in regulating population abundance, or that biotic factors internal to the population (e.g., spawner-recruit dynamics, growth dynamics) or external to the population (e.g., predator-prey dynamics, sympatric competitors, disease) remain poorly understood. Achieving a greater understanding of these dynamics is important for stock, game, and invasive species management. In 2017, as part of a larger study designed to gain vital population rate information for smallmouth buffalo in the Upper Mississippi and Illinois Rivers (“Smallmouth Buffalo population demographics of the Upper Mississippi River System”; UMRR LTRM 2018SOW project items 2018MMBF1-2018MMBF6) annual growth patterns in smallmouth buffalo were determined and evaluated. This was accomplished by measuring growth histories recorded in annual growth increments on hard bony parts (here otoliths), a method known generically as biochronology, and somewhat analogous to dendrochronology practiced by foresters. These methods allow one to generate time-series of annual growth histories that depend upon age, year class (i.e., cohort), and annual environmental conditions experienced by the population over time (Weisberg, 1993). Biochronology methods were used to develop a 36-year time series of smallmouth buffalo growth in the Upper Mississippi and Illinois Rivers across a 1200 km ecological and human use disturbance gradient. Annual growth intervals were identified and measured from otoliths to determine fish age and growth history. A mixed model that parses the growth increment into age and year effects was fit to these data. Given the pronounced ecological and disturbance gradients inherent to the UMRS and the study domain, an a priori expectation of differing patterns in growth is accepted as a null hypothesis to test. The goal of this study was to model smallmouth buffalo growth as a function of the age of the fish and the growth year in which the growth was gained. The primary modeling objective was to parse growth observed on each annulus into a portion attributable to the age of the fish and the portion attributable to the year in which the growth was gained. In effect, this modeling approach removes the somewhat trivial age effects on growth so that a non-confounded growth year effect can be gained. Results attributable to growth year provide a time series of growth information that is of the same duration as the oldest fish observed and solely reflects environmental influences on growth. These model responses can then be investigated relative to environmental covariate time-series suspected of influencing growth of smallmouth buffalo in the Upper Mississippi and Illinois Rivers (e.g., temperature, discharge, population density, population mortality, forage availability, sympatric competition, habitat composition, navigation intensity, nonnative fish prominence, etc.). Thus, the primary scientific objective was to investigate if and how smallmouth buffalo growth varies in accordance with innate ecological and disturbance gradients across the study domain.

Illinois, Iowa, Minnesota, Missouri, Wisconsin↗
USGS2002

Sociocultural and institutional drivers and constraints to mineral supply; the meaning of scarcity in the 21st century: drivers and constraints to the supply of minerals using regional, national and global perspectives

The sociocultural dimensions of mineral supply at the outset of the 21st century are making the supply process increasingly complex. The dimensions encompass legal, financial, environmental, cultural, and global implications of mining, and are driving unprecedented change in the way minerals supply will be accomplished in the future. Minerals scarcity on a global scale is subordinate to other societal issues about mineral resources and reserves estimated to meet society's demands for decades to centuries in the future. This report reviews historical and present-day sociocultural drivers of change, and reactions of the minerals industry to these drivers. It is reflective primarily of conditions in the United States, but also uses examples from other countries. It expresses viewpoints on sociocultural drivers as seen by constituents of the minerals industry and several other communities of interest including Aboriginal peoples, non-government organizations; labor; mining-dependent communities; mining-affected communities; researchers; and government (federal, state/provincial, and local). It provides overviews of the demand for minerals in the United States, and the status of land available for mining. The report uses a case study of a metals mining project in Wisconsin to illustrate specific sociocultural drivers and constraints to minerals supply, and how these influence the minerals industry. Over the past 150 years, a progression of sociocultural movements under the headings of conservationism, environmentalism, and sustainable development have nurtured societal values that have come to influence the mineral supply process in important ways. These movements reflect a continuing tension between the demand for minerals and other resources, and the simultaneous demand for aesthetic, spiritual, ecological, cultural, and other attributes of the land. The tension is an important element in current international debates about the meaning and future of sustainable development. This report focuses on some of the social challenges to the minerals industry to supply minerals, while at the same time providing environmental protection, economic growth, and sociocultural acceptance. All these issues fall under the rubric of sustainable development. It also describes current industry responses to sustainability, including the Global Mining Initiative (2001a), an attempt to introduce major changes in global industry practices to begin the 21st century. This report complements other documents in the series on physical supply, technological advancement, and economic and policy drivers (Wilburn and others, 2001).

Open-File Report↗
USGS2023

Managing the threat of infectious disease in fisheries and aquaculture using structured decision making

Fisheries and aquaculture provide food and economic security, especially in the developing world, but both face challenges from infectious disease. Here, we consider management of disease issues from a structured decision-making perspective to examine how infectious disease can threaten seafood production and influence management decisions. For both wild fisheries and aquaculture, disease-management objectives generally aim to mitigate the severity and economic burden of outbreaks. General management strategies include manipulating host densities, reducing system connectivity, conserving or improving habitat, and implementing direct treatments or some other biological interventions. To inform decisions, mathematical models can be used to explore disease dynamics and to forecast the potential effectiveness of alternative management actions. Developing and implementing disease-management strategies also involve considering uncertainties and balancing competing stakeholder interests and risk tolerances. We conclude by outlining several steps for applying structured decision making that are broadly useful to decision makers facing issues related to disease.

Frontiers in Ecology and the Environment↗