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At least 307 records · Page 17Linked to original sources
USGS2018

Integrated observations and informatics improve understanding of changing marine ecosystems

Marine ecosystems have numerous benefits for human societies around the world and many policy initiatives now seek to maintain the health of these ecosystems. To enable wise decisions, up to date and accurate information on marine species and the state of the environment they live in is required. Moreover, this information needs to be openly accessible to build indicators and conduct timely assessments that decision makers can use. The questions and problems being addressed demand global-scale investigations, transdisciplinary science, and mechanisms to integrate and distribute data that otherwise would appear to be disparate. Essential Ocean Variables (EOVs) and marine Essential Biodiversity Variables (EBVs), conceptualized by the Global Ocean Observing System (GOOS) and the Marine Biodiversity Observation Network (MBON), respectively, guide observation of the ocean. Additionally, significant progress has been made to coordinate efforts between existing programs, such as the GOOS, MBON, and Ocean Biogeographic Information System collaboration agreement. Globally and nationally relevant indicators and assessments require increased sharing of data and analytical methods, sustained long-term and large-scale observations, and resources to dedicated to these tasks. We propose a vision and key tenets as a guiding framework for building a global integrated system for understanding marine biological diversity and processes to address policy and resource management needs. This framework includes: using EOVs and EBVs and implementing the guiding principles of Findable, Accessible, Interoperable, Reusable (FAIR) data and action ecology. In doing so, we can encourage relevant, rapid, and integrative scientific advancement that can be implemented by decision makers to maintain marine ecosystem health.

Frontiers in Marine Science↗
USGS2008

Understanding the ecology of disease in Great Lakes fish populations

Disease may be an important factor affecting wild fish population dynamics in the Great Lakes, but a lack of information on the ecology of fish disease currently precludes the prediction of risks to fish populations. Here we propose a conceptual framework for conducting ecologically-oriented fish health research that addresses the inter-relationships among fish health, fish populations, and ecosystem dysfunction in the Great Lakes. The conceptual framework describes potential ways in which disease processes and the population-level impacts of disease may relate to ecosystem function, and suggests that functional ecosystems are more likely to be resilient with respect to disease events than dysfunctional ecosystems. We suggest that ecosystem- or population-level research on the ecology of fish disease is necessary to understand the relationships between ecosystem function and fish health, and to improve prediction of population-level effects of diseases on wild fish populations in the Great Lakes. Examples of how the framework can be used to generate research questions are provided using three disease models of current interest in the Great Lakes: thiamine deficiency complex, botulism, and bacterial kidney disease.

Great Lakes↗
USGS2026

Using quantitative polymerase chain reaction to assess phytoplankton and indicate eutrophication in freshwater rivers: A multiyear nationwide study across the United States

Phytoplankton are essential primary producers in fresh surface water that are critical to the health of ecosystems. However, phytoplankton overgrowth due to eutrophication threatens ecological, economic, and public health. Therefore, assessing phytoplankton is fundamental for understanding the productivity, health, and trophic status of freshwater ecosystems. Light microscopy and chlorophyll a assessment are common approaches for studying phytoplankton. They are easy to use, cost-effective, and reliable but have significant limitations. Microscopy has a low throughput and is time-consuming and labor-intensive. Chlorophyll a assessment does not reveal phytoplankton community composition and structure. For comparison, quantitative polymerase chain reaction (qPCR) is widely applied in quantifying microorganisms, offering multiple advantages, including high throughput, sensitivity, accuracy, and robustness. However, a research gap remains regarding the feasibility of using qPCR to assess phytoplankton and indicate trophic status of freshwater bodies. We conducted a nationwide, multiyear study in the United States to compare the performance of qPCR, microscopy, and chlorophyll a assessment in assessing phytoplankton and trophic statuses of multiple freshwater rivers. From early summer to late fall in 2017, 2018, and 2019, we assessed phytoplankton, chlorophyll a , pheophytin a , and the overall Trophic Level Index ( TLI Overall ) at the sampling sites in 12 large freshwater rivers in three regions (western, midcontinent, and eastern) across the United States. The seasonal summed abundance of four major phytoplankton taxa [Bacillariophyta (diatoms), Cyanobacteria (blue-green algae), Chlorophyta (green algae), and Dinoflagellates (Dinophyta)] ranged from 6.88 log 10 (GCN·L –1 ) (the Connecticut River, 2017) to 9.29 log 10 (GCN·L –1 ) (the Kansas River, 2019) (GCN: gene or genome copy number). qPCR- and microscopy-based phytoplankton abundance of eight phytoplankton taxa had a significant positive allometric or log-linear correlation (adjusted R 2 = 0.836, p -value < 0.001, n = 815). In addition, qPCR-based phytoplankton abundance had positive allometric or log-linear correlations with chlorophyll a (adjusted R 2 = 0.5437, p -value < 0.001, n = 164), pheophytin a (adjusted R 2 = 0.3378, p -value < 0.001, n = 164), and TLI Overall (adjusted R 2 = 0.4789, p -value < 0.001, n = 164). Therefore, qPCR is a promising alternative to microscopy and chlorophyll a for studying phytoplankton and trophic status in freshwater rivers. Moreover, phytoplankton abundance had limited temporal variation within each sampling season and over the three sampling seasons in 2017, 2018, and 2019 but showed clear spatial variation. The midcontinent sites had significantly higher phytoplankton abundance, chlorophyll a concentrations, pheophytin a concentrations, and TLI Overall values than those in the eastern and western rivers, reflecting the higher trophic statuses of the midcontinent rivers. This work also provides the thresholds of qPCR-based phytoplankton abundance for delineating trophic statuses in freshwater rivers. Overall, this work demonstrates that qPCR is a promising tool for studying phytoplankton and characterizing the trophic status of freshwater rivers.

Book chapter↗
USGS2013

2011 floods of the central United States

The Central United States experienced record-setting flooding during 2011, with floods that extended from headwater streams in the Rocky Mountains, to transboundary rivers in the upper Midwest and Northern Plains, to the deep and wide sand-bedded lower Mississippi River. The U.S. Geological Survey (USGS), as part of its mission, collected extensive information during and in the aftermath of the 2011 floods to support scientific analysis of the origins and consequences of extreme floods. The information collected for the 2011 floods, combined with decades of past data, enables scientists and engineers from the USGS to provide syntheses and scientific analyses to inform emergency managers, planners, and policy makers about life-safety, economic, and environmental-health issues surrounding flood hazards for the 2011 floods and future floods like it. USGS data, information, and scientific analyses provide context and understanding of the effect of floods on complex societal issues such as ecosystem and human health, flood-plain management, climate-change adaptation, economic security, and the associated policies enacted for mitigation. Among the largest societal questions is "How do we balance agricultural, economic, life-safety, and environmental needs in and along our rivers?" To address this issue, many scientific questions have to be answered including the following: * How do the 2011 weather and flood conditions compare to the past weather and flood conditions and what can we reasonably expect in the future for flood magnitudes? * What is the “natural” hydrology of these watersheds and how have they been changed? * How do rivers change during floods and what effects do they have on the natural and built environment: conversely, what effects do the natural and built environments have on rivers and floods? * Do floods contribute to the transport and fate of contaminants that affect human and ecosystem health? In an effort to help address these and other questions, USGS Professional Paper 1798 consists of independent but complementary chapters dealing with various scientific aspects of the 2011 floods in the Central United States.

Professional Paper↗
USGS2017

USGS microbiome research

Microbiomes are the communities of microorganisms (for example, bacteria, viruses, and fungi) that live on, in, and around people, plants, animals, soil, water, and the atmosphere. Microbiomes are active in the functioning of diverse ecosystems, for instance, by influencing water quality, nutrient acquisition and stress tolerance in plants, and stability of soil and aquatic environments. Microbiome research conducted by the U.S. Geological Survey spans many of our mission areas. Key research areas include water quality, understanding climate effects on soil and permafrost, ecosystem and wildlife health, invasive species, contaminated environments to improve bioremediation, and enhancing energy production. Microbiome research will fundamentally strengthen the ability to address the global challenges of maintaining clean water, ensuring adequate food supply, meeting energy needs, and preserving human and ecosystem health.

Fact Sheet↗
USGS2004

Preventing, controlling, and managing alien species introduction for the health of aquatic and marine ecosystems

The introduction and spread of invasive species is an emerging global problem. As economic and ecological impacts continue to grow, there will be an increasing need to develop innovative solutions and global partnerships to combat the increasing rate of invasions and their accompanying impacts. Threats to sustainable fisheries in North America associated with alien species come from many global directions and sources and can be deliberate or the unintended consequence of other actions. Decisions about the role of sustainable fisheries in protecting and restoring the health of aquatic ecosystems become even more complex when economic and social factors are considered along with environmental impacts, because many intentionally introduced species also have associated economic and community costs and benefits. Actions designed to prevent or control alien species in an aquatic ecosystem are often complicated by these nonenvironmental factors as well as public perception and opinion. Aquatic ecosystems are disturbed to varying degrees by alien species, including disease organisms. Prevention is the first and best line of defense. Determining likely pathways and effective countermeasures is more cost-effective than either eradication or control. Our ability to quickly identify new species and their associated risk to ecosystems is critical in designing and implementing effective control and management actions. Lack of infrastructure and necessary resources, clear-cut authority for regulation and action, and scientific information about the biology of alien species and effective control techniques are often limiting factors that prevent the needed action to protect aquatic ecosystems.

American Fisheries Society Symposium↗
USGS2010

The Border Environmental Health Initiative: Investigating the transboundary Santa Cruz watershed

In 2004 the U.S. Geological Survey (USGS) launched the Border Environmental Health Initiative (BEHI), a major project encompassing the entire U.S.-Mexico border region. In 2009, a study of the Santa Cruz River Watershed (SCW), located in the border region of Arizona and Sonora, Mexico, was initiated as part of the BEHI. In this borderland region of the desert Southwest, human health and the ecosystems on which humans rely depend critically on limited water resources. Surface water is scarce during much of the year, and groundwater is the primary source for industrial, agricultural, and domestic use. In order to identify risks to water resources in the SCW, and the potential consequences to riparian ecosystems and ultimately human health, the USGS is using an interdisciplinary and integrative approach that incorporates the expertise of geographers, hydrologists, biologists, and geologists to track organic and inorganic contaminants and their effects from sources to sinks in sediment, water, plants, and animals. Existing groundwater and surface-water models are being used and modified to assess contaminant and sediment transport.

Arizona, Sonora↗
USGS2007

Systematic mapping of bedrock and habitats along the Florida Reef tract — Central Key Largo to Halfmoon Shoal (Gulf of Mexico)

The fragile coral reefs of the Florida Keys form the largest living coral reef ecosystem in the continental United States. Lining the shallow outer shelf approximately 5 to 7 km seaward of the keys, the reefs have national aesthetic and resource value. As recently as the 1970s, the coral reefs were the heart of a vibrant ecosystem. Since then, the health of all ecosystem components has declined markedly due to a variety of environmental stressors . Corals are succumbing to bleaching and diseases. Species that are the building blocks of solid reef framework are increasingly being replaced by species that do not construct reef framework. Algal proliferation is increasing competition for space and hard surfaces needed by coral larvae for settlement. Decline of the coral reef ecosystem has significant negative implications for economic vitality of the region, ranging from viability of the tourism industry attracted by the aesthetics to commercial fisheries drawn by the resources. At risk of loss are biologic habitats and reef resources, including interconnected habitats for endangered species in shoreline mangroves, productive nearshore marine and wetland nurseries, and economic offshore fisheries. In 1997, the U.S. Geological Survey's Coastal and Marine Geology Program undertook a comprehensive 7-year-long mission to consolidate, synthesize, and map new (1997) and existing geologic and biologic information into a digitized regional database and one-volume reference source on the geologic history of the Florida Keys reef tract (this report). The project was conducted in cooperation with the National Oceanic and Atmospheric Administration's National Marine Sanctuary Program. The purpose was to examine the natural evolution and demise of several coral reef ecosystems over the past 325,000 years, with an eye toward gaining a better understanding of the cause of the reef decline observed today. Scientific data and datasets presented in this report are intended for use by others in ongoing efforts to delineate which components of reef decline in the Florida Keys may be natural and which may be a result of human activities. Beyond scientific baseline datasets, this report also incorporates environmental, social, and historical aspects of the Florida Keys, including the impact of exploratory oil wells on benthic habitats off Florida.

Florida↗
USGS2010

Fort Collins Science Center-Fiscal year 2009 science accomplishments

Public land and natural resource managers in the United States are confronted with increasingly complex decisions that have important ramifications for both ecological and human systems. The scientists and technical professionals at the U.S. Geological Survey Fort Collins Science Center?many of whom are at the forefront of their fields?possess a unique blend of ecological, socioeconomic, and technological expertise. Because of this diverse talent, Fort Collins Science Center staff are able to apply a systems approach to investigating complicated ecological problems in a way that helps answer critical management questions. In addition, the Fort Collins Science Center has a long record of working closely with the academic community through cooperative agreements and other collaborations. The Fort Collins Science Center is deeply engaged with other U.S. Geological Survey science centers and partners throughout the Department of the Interior. As a regular practice, we incorporate the expertise of these partners in providing a full complement of ?the right people? to effectively tackle the multifaceted research problems of today's resource-management world. In Fiscal Year 2009, the Fort Collins Science Center's scientific and technical professionals continued research vital to Department of the Interior's science and management needs. Fort Collins Science Center work also supported the science needs of other Federal and State agencies as well as non-government organizations. Specifically, Fort Collins Science Center research and technical assistance focused on client and partner needs and goals in the areas of biological information management and delivery, enterprise information, fisheries and aquatic systems, invasive species, status and trends of biological resources (including human dimensions), terrestrial ecosystems, and wildlife resources. In the process, Fort Collins Science Center science addressed natural-science information needs identified in the U.S. Geological Survey Science Strategy (http://www.usgs.gov/science_strategy), including understanding and predicting change in ecosystems, climate variability and change, energy development and land management, the role of the environment and wildlife in human health, freshwater ecosystems, data integration, and evolving technologies. Several science projects were expanded in Fiscal Year 2009 to meet these evolving needs.

Open-File Report↗
USGS2024

The Ecosystem Approach in the 21st century: Guiding science and management – A synthesis

Maintaining the integrity and health of aquatic ecosystems is critical to sustaining the many valued services that they provide society. Unfortunately, achieving this goal has proven challenging in most of the world's large ecosystems owing to rampant environmental change caused by human-driven stress, including accelerating climate change, pollution of waterways, habitat modification and destruction, and the continued spread of non-native species (He and Silliman, 2019; Jenny et al., 2020; Smith et al., 2015; Steffen et al., 2007). These stressors, which can also include purposeful management actions (e.g. nutrient and fisheries management), are presenting a grave challenge globally to efforts aimed at securing a sustainable future for nature, society, and the economy.

Aquatic Ecosystem Health & Management↗
USGS2011

Lipid catabolism of invertebrate predator indicates widespread wetland ecosystem degradation

Animals frequently undergo periods when they accumulate lipid reserves for subsequent energetically expensive activities, such as migration or breeding. During such periods, daily lipid-reserve dynamics (DLD) of sentinel species can quantify how landscape modifications affect function, health, and resilience of ecosystems. Aythya affinis (Eyton 1838; lesser scaup; diving duck) are macroinvertebrate predators; they migrate through an agriculturally dominated landscape in spring where they select wetlands with the greatest food density to refuel and accumulate lipid reserves for subsequent reproduction. We index DLD by measuring plasma-lipid metabolites of female scaup (n = 459) that were refueling at 75 spring migration stopover areas distributed across the upper Midwest, USA. We also indexed DLD for females (n = 44) refueling on a riverine site (Pool 19) south of our upper Midwest study area. We found that mean DLD estimates were significantly (P<0.05) less than zero in all ecophysiographic regions of the upper Midwest, and the greatest negative value was in the Iowa Prairie Pothole region (-31.6). Mean DLD was 16.8 at Pool 19 and was markedly greater than in any region of the upper Midwest. Our results indicate that females catabolized rather than stored lipid reserves throughout the upper Midwest. Moreover, levels of lipid catabolism are alarming, because scaup use the best quality wetlands available within a given stopover area. Accordingly, these results provide evidence of wetland ecosystem degradation across this large agricultural landscape and document affects that are carried-up through several trophic levels. Interestingly, storing of lipids by scaup at Pool 19 likely reflects similar ecosystem perturbations as observed in the upper Midwest because wetland drainage and agricultural runoff nutrifies the riverine habitat that scaup use at Pool 19. Finally, our results underscore how using this novel technique to monitor DLD, of a carefully selected sentinel species, can index ecosystem health at a landscape scale.

PLoS ONE↗
USGS2014

ARkStorm@Tahoe: Stakeholder perspectives on vulnerabilities and preparedness for an extreme storm event in the greater Lake Tahoe, Reno, and Carson City region

Atmospheric rivers (ARs) are strongly linked to extreme winter precipitation events in the Western U.S., accounting for 80 percent of extreme floods in the Sierra Nevada and surrounding lowlands. In 2010, the U.S. Geological Survey developed the ARkStorm extreme storm scenario for California to quantify risks from extreme winter storms and to allow stakeholders to better explore and mitigate potential impacts. To explore impacts on natural resources and communities in montane and adjacent environments, we downscaled the scenario to the greater Lake Tahoe, Reno and Carson City region of northern Nevada and California. This ArkStorm@Tahoe scenario was presented at six stakeholder meetings, each with a different geographic and subject matter focus. Discussions were facilitated by the ARkStorm@Tahoe team to identify social and ecological vulnerabilities to extreme winter storms, science and information needs, and proactive measures that might minimize impacts from this type of event. Information collected in these meetings was used to develop a tabletop emergency response exercise and set of recommendations for increasing resilience to extreme winter storm events in both Tahoe and the downstream communities of Northern Nevada. Over 300 individuals participated in ARkStorm@Tahoe stakeholder meetings and the emergency response exercise, including representatives from emergency response, natural resource and ecosystem management, health and human services, public utilities, and businesses. Interruption of transportation, communications, and lack of power and backup fuel supplies were identified as the most likely and primary points of failure across multiple sectors and geographies, as these interruptions have cascading effects on natural and human systems by impeding emergency response efforts. Other key issues that arose in discussions included contamination risks to water supplies and aquatic ecosystems, especially in the Tahoe Basin and Pyramid Lake, interagency coordination, credentialing, flood management, and coordination of health and human services during such an event. Mitigation options were identified for each of the key issues. Several science needs were identified, particularly the need for improved flood inundation maps. Finally, key lessons learned were identified and may help to increase preparedness, response and recovery from extreme storms in the future.

Report↗
USGS2016

Science to support aquatic animal health

Healthy aquatic ecosystems are home to a diversity of plants, invertebrates, fish and wildlife. Aquatic animal populations face unprecedented threats to their health and survival from climate change, water shortages, habitat alteration, invasive species and environmental contaminants. These environmental stressors can directly impact the prevalence and severity of disease in aquatic populations. For example, periodic fish kills in the upper Chesapeake Bay Watershed are associated with many different opportunistic pathogens that proliferate in stressed fish populations. An estimated 80 percent of endangered juvenile Puget Sound steelhead trout die within two weeks of entering the marine environment, and a role for disease in these losses is being investigated. The introduction of viral hemorrhagic septicemia virus (VHSV) into the Great Lakes—a fishery worth an estimated 7 billion dollars annually—resulted in widespread fish die-offs and virus detections in 28 different fish species. Millions of dying sea stars along the west coast of North America have led to investigations into sea star wasting disease. U.S. Geological Survey (USGS) scientists are assisting managers with these issues through ecological investigations of aquatic animal diseases, field surveillance, and research to promote the development of mitigation strategies.

Fact Sheet↗
USGS2017

Using gene transcription to assess ecological and anthropological stressors in brown bears

Increasingly, population- and ecosystem-level health assessments are performed using sophisticated molecular tools. Advances in molecular technology enable the identification of synergistic effects of multiple stressors on the individual physiology of different species. Brown bears ( Ursus arctos ) are an apex predator; thus, they are ideal candidates for detecting potentially ecosystem-level systemic perturbations using molecular-based tools. We used gene transcription to analyze 130 brown bear samples from three National Parks and Preserves in Alaska. Although the populations we studied are apparently stable in abundance and exist within protected and intact environments, differences in transcript profiles were noted. The most prevalent differences were among locations. The transcript patterns among groups reflect the influence of environmental factors, such as nutritional status, disease, and xenobiotic exposure. However, these profiles also likely represent baselines for each unique environment by which future measures can be made to identify early indication of population-level changes due to, for example, increasing Arctic temperatures. Some of those environmental changes are predicted to be potentially positive for brown bears, but other effects such as the manifestation of disease or indirect effects of oceanic acidification may produce negative impacts.

Alaska↗
USGS2006

Environmental aspects of produced-water salt releases in onshore and coastal petroleum-producing areas of the conterminous U.S. - a bibliography

Environmental effects associated with the production of oil and gas have been reported since the first oil wells were drilled in the Appalachian Basin in Pennsylvania and Kentucky in the early to mid-1800s. The most significant of these effects are the degradation of soils, ground water, surface water, and ecosystems they support by releases of suspended and dissolved hydrocarbons and co-produced saline water. Produced water salts are less likely than hydrocarbons to be adsorbed by mineral phases in the soil and sediment and are not subject to degradation by biologic processes. Sodium is a major dissolved constituent in most produced waters and it causes substantial degradation of soils through altering of clays and soil textures and subsequent erosion. Produced water salts seem to have the most wide-ranging effects on soils, water quality, and ecosystems. Trace elements, including boron, lithium, bromine, fluorine, and radium, also occur in elevated concentrations in some produced waters. Many trace elements are phytotoxic and are adsorbed and may remain in soils after the saline water has been flushed away. Radium-bearing scale and sludge found in oilfield equipment and discarded on soils pose additional hazards to human health and ecosystems. This bibliography includes studies from across the oil- and natural-gas-producing areas of the conterminous United States that were published in the last 80 yrs. The studies describe the effects of produced water salts on soils, water quality, and ecosystems. Also included are reports that describe (1) the inorganic chemistry of produced waters included in studies of formation waters for various purposes, (2) other sources of salt affecting water quality that may be mistaken for produced water effects, (3) geochemical and geophysical techniques that allow discrimination of salt sources, (4) remediation technologies designed to repair damage caused to soils and ground water by produced water salts, and (5) contamination by naturally occurring radioactive materials (NORM)at oilfield sites.

Open-File Report↗
USGS2017

Functional integrity of freshwater forested wetlands, hydrologic alteration, and climate change

Climate change will challenge managers to balance the freshwater needs of humans and wetlands. The Intergovernmental Panel on Climate Change predicts that most regions of the world will be exposed to higher temperatures, CO 2 , and more erratic precipitation, with some regions likely to have alternating episodes of intense flooding and mega-drought. Coastal areas will be exposed to more frequent saltwater inundation as sea levels rise. Local land managers desperately need intra-regional climate information for site-specific planning, management, and restoration activities. Managers will be challenged to deliver freshwater to floodplains during climate change-induced drought, particularly within hydrologically altered and developed landscapes. Assessment of forest health, both by field and remote sensing techniques, will be essential to signal the need for hydrologic remediation. Studies of the utility of the release of freshwater to remediate stressed forested floodplains along the Murray and Mississippi Rivers suggest that brief episodes of freshwater remediation for trees can have positive health benefits for these forests. The challenges of climate change in forests of the developing world will be considered using the Tonle Sap of Cambodia as an example. With little ecological knowledge of the impacts, managing climate change will add to environmental problems already faced in the developing world with new river engineering projects. These emerging approaches to remediate stressed trees will be of utmost importance for managing worldwide floodplain forests with predicted climate changes.

Ecosystem Health and Sustainability↗
USGS2004

Biodiversity of Fungi : Inventory and Monitoring Methods

Biodiversity of Fungi is essential for anyone collecting and/or monitoring any fungi. Fascinating and beautiful, fungi are vital components of nearly all ecosystems and impact human health and our economy in a myriad of ways. Standardized methods for documenting diversity and distribution have been lacking. An wealth of information, especially regrading sampling protocols, compiled by an international team of fungal biologists, make Biodiversity of Fungi an incredible and fundamental resource for the study of organismal biodiversity. Chapters cover everything from what is a fungus, to maintaining and organizing a permanent study collection with associated databases; from protocols for sampling slime molds to insect associated fungi; from fungi growing on and in animals and plants to mushrooms and truffles. The chapters are arranged both ecologically and by sampling method rather than by taxonomic group for ease of use. The information presented here is intended for everyone interested in fungi, anyone who needs tools to study them in nature including naturalists, land managers, ecologists, mycologists, and even citizen scientists and sophiscated amateurs. Fungi are among the most important organisms in the world; they play vital roles in ecosystem functions and have wide-ranging effects, both positive and negative, on humans and human-related activities. There are about 1.5 million species of fungi. The combination of fungal species and abundances in an ecosystem are often used as indicators of ecosystem health and as indicators of the effects of pollution and of different management and use plans. Because of their significance, it is important that these organisms be monitored. This book is the first comprehensive treatment of fungal inventory and monitoring, including standardized sampling protocols as well as information on study design, sample preservation, and data analysis.

Book↗
USGS2026

Streamflow and surface-water presence data availability across the conterminous United States: A review for headwater systems

Water is essential for life on Earth, supporting ecosystems, human health, and economic activities. Hydrology relies on observational data, and this paper discusses regional and national datasets for the conterminous United States (CONUS) publicly available as of 2023, focusing on headwaters, defined as first- and second-order streams at 1:24000 scale. It identifies 72 primary and secondary datasets and 11 repositories and argues how better integration and accessibility of hydrological data can improve research. The paper distinguishes between datasets where streamflow was the primary data collection objective and those where it was secondary. This distinction highlights opportunities to consider data from efforts peripheral to hydrology but is still useful for understanding hydrologic conditions. The analysis reveals that out of about 118 000 active and inactive stream observation sites, about 6.6% and 25% are located on first- and second-order streams, respectively. This indicates a substantial data gap for headwater systems, which account for over 77% of stream length in CONUS. Federal agencies manage 72% of hydrologic monitoring sites across all stream orders, but only 34% of these are in headwater systems. Academic institutions operate about 2% of sites, with almost half (48%) in headwater systems, focusing on ecosystem research. State agencies also operate about 2% of sites, primarily on larger systems, with 19% on headwaters. Additionally, 23% of sites are managed by multiple agencies. Spatial patterns further reveal pronounced disparities among physiographic regions. Eastern and coastal provinces show relatively dense monitoring, while central and western regions show sparse coverage. These gaps reflect historical priorities, logistical constraints, funding limitations, and the high cost of continuous instrumentation. To address biases in monitoring networks, data collection could be enhanced with low-cost monitoring, community science, and remote sensing technologies. This study also notes the benefits of long-term monitoring and prioritizing retention of streamgages with longer records.

conterminous United States↗