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Response of western mountain ecosystems to climatic variability and change: The Western Mountain Initiative

Mountain ecosystems within our national parks and other protected areas provide valuable goods and services such as clean water, biodiversity conservation, and recreational opportunities, but their potential responses to expected climatic changes are inadequately understood. The Western Mountain Initiative (WMI) is a collaboration of scientists whose research focuses on understanding and predicting responses of western mountain ecosystems to climatic variability and change. It is a legacy of the Global Change Research Program initiated by the National Park Service (NPS) in 1991 and continued by the U.S. Geological Survey (USGS) to this day as part of the U.S. Climate Change Science Program (http://www.climatescience.gov/). All WMI scientists are active participants in CIRMOUNT, and seek to further its goals.

California, Colorado, Montana, New Mexico, Washing↗

Response of western mountain ecosystems to climatic variability and change: The Western Mountain Initiative

Mountain ecosystems within our national parks and other protected areas provide valuable goods and services such as clean water, biodiversity conservation, and recreational opportunities, but their potential responses to expected climatic changes are inadequately understood. The Western Mountain Initiative (WMI) is a collaboration of scientists whose research focuses on understanding and predicting responses of western mountain ecosystems to climatic variability and change. It is a legacy of the Global Change Research Program initiated by the National Park Service (NPS) in 1991 and continued by the U.S. Geological Survey (USGS) to this day as part of the U.S. Climate Change Science Program (http://www.climatescience.gov/). All WMI scientists are active participants in CIRMOUNT, and seek to further its goals.

Mountain Views↗

Nearshore bathymetric evolution on a high-energy beach during the 2009-10 El Nino winter

The nearshore bathymetric evolution of a high-energy beach at the mouth of San Francisco Bay, California (USA), was tracked before, during, and after the powerful El Niño winter of 2009-10 to quantify alongshore bar formation and migration as well as the magnitude and alongshore variability of cross-shore transport. The observed deep-water winter wave energy was among the highest ever recorded in Northern California, peaking during a 7 day period in the middle of January 2010 with a mean deep-water significant wave height ( H s ) of 5.5 m, and a maximum H s = 9 m . The extreme forcing during the study period resulted in local bed level changes that approached 5 m, cross-shore bar migration of > 250 m, ~3 m alongshore trough deepening, and a net gain of ~1.6 million m 3 of sediment to the nearshore profile over the 7 km alongshore extent of the survey area, leaving beach sand levels severely depleted. The morphological evolution observed during this El Niño winter may serve as a proxy for future coastal response to climate change if current trends of increased storminess continue for the U.S. West Coast.

California↗

Growth and defense characteristics of whitebark pine (Pinus albicaulis) and lodgepole pine (Pinus contorta var latifolia) in a high-elevation, disturbance-prone mixed-conifer forest in northwestern Montana, USA

Recent, widespread tree mortality in the western U.S. resulting from changes in climate, pathogens, insect activity, and forest management practices has led to concerns for many ecologically and culturally important species. Within conifers, resin-based defenses have long been recognized as a primary defense mechanism against a variety of insects and pathogens. Oleoresin produced by trees contain complex mixtures of terpenoids that have numerous insecticidal and fungicidal properties. Research has also identified links between resin duct characteristics and increased probability of survival during bark beetle outbreaks. Whitebark pine ( Pinus albicaulis ) is a culturally significant high elevation species that provides numerous ecological services within subalpine and alpine ecosystems. Whitebark pine has co-evolved with a suite of biotic and abiotic disturbances. Individual trees allocate resources towards growth and resin-based defenses, making it a good candidate species to evaluate growth and defense relationships and tradeoffs. In this study we compared constitutive resin chemistry, tree growth and resin duct anatomy between similarly aged whitebark and lodgepole pine ( P. contorta var latifolia ) growing in proximity within a disturbance-prone, mixed-conifer forest in northwestern Montana. These two host species have varying degrees of historical exposure to mountain pine beetle. Our research yields four important findings. First, we did not find evidence of a tradeoff between tree growth and tree defenses (resin duct morphology and resin chemistry). This suggests that trees growing under favorable field conditions can experience high growth rates and still allocate ample resources towards defense. Second, we found that resin ducts and constitutive mono- and sesqui- terpenes were not correlated in lodgepole pine while duct production and area were positively related to constitutive monoterpenes, and duct size and area were positively related to constitutive sesquiterpenes, in whitebark pine. The lack of distinct, consistent relationships between these defensive features suggests that both whitebark and lodgepole pine trees present beetles with numerous, complex combinations of resin-based defenses. Third, based on constitutive terpene profiles, bark beetles are more likely to enter lodgepole pine but more likely to successfully elicit mass attacks in whitebark pine, which agrees with beetle attack and success patterns observed in the field. Fourth, overstory competition, particularly by Engelmann spruce ( Picea engelmannii ), can influence tree defenses, specifically by reducing constitutive terpene concentrations in lodgepole and whitebark pine. Competitive tree interactions could lead to altered bark beetle-conifer interactions as host and nonhost species migrate in response to changing climate. Our results suggest that strategies designed to support whitebark pine populations can benefit from better understanding interactions among growth, competition and physical and chemical defenses in response to multiple disturbance.

Montana↗

Climate-Smart Siting for renewable energy expansion

A massive expansion of renewable energy (RE) is underway to meet the world’s climate goals. Although RE serves to reduce threats from climate change, it can also pose threats to species whose current and future ranges intersect with RE installations. Here, we propose a “Climate-Smart Siting” framework for addressing potential conflicts between RE expansion and biodiversity conservation. The framework engenders authentic consultation with affected and disadvantaged communities throughout and uses overlay and optimization routines to identify focal areas now and in the future where RE development poses promise and peril as species’ ranges shift in response to climate change. We use this framework to demonstrate methods, identify decision outcomes, and discuss market-based levers for aligning RE expansion with the United Nations Global Biodiversity Framework now and as climate change progresses. In the face of the climate crisis, a Climate-Smart Siting strategy could help create solutions without causing further harm to biodiversity and human communities.

iScience↗

Ecological thresholds and transformations due to climate change: The role of abiotic stress

An ecological threshold is the point at which a comparatively small environmental change triggers an abrupt and disproportionately large ecological response. In the face of accelerating climate change, there is concern that abrupt ecosystem transformations will become more widespread as critical ecological thresholds are crossed. There has been ongoing debate, however, regarding the prevalence of ecological thresholds across the natural world. While ecological thresholds are ubiquitous in some ecosystems, thresholds have been difficult to detect in others. Some studies have even concluded that threshold responses are uncommon in the natural world and overly emphasized in the ecological literature. As ecologists who work in ecosystems chronically exposed to high abiotic stress, we consider ecological thresholds and ecosystem transformations to be critical concepts that can greatly advance understanding of ecological responses to climate change and inform ecosystem management. But quantifying ecological thresholds can be challenging, if not impossible, without data that are strategically collected for that purpose. Here, we present a conceptual framework built upon linkages between abiotic stress, climate-driven ecological threshold responses, and the risk of ecosystem transformation. We also present a simple approach for quantifying ecological thresholds across abiotic stress gradients. We hypothesize that climate-driven threshold responses are especially influential in ecosystems chronically exposed to high abiotic stress, where autotroph diversity is low and foundation species play a prominent ecological role. Abiotic conditions in these environments are often near physiological tolerance limits of foundation species, which means that small abiotic changes can trigger landscape-level ecological transformations. Conversely, the alleviation of stress near thresholds can allow foundation species to thrive and spread into previously inhospitable locations. We provide examples of this climate-driven threshold behavior from four high-stress environments: coastal wetlands, coral reefs, drylands, and alpine ecosystems. Our overarching aim in this review is to clarify the strong relationships between abiotic stress, climate-driven ecological thresholds, and the risk of ecosystem transformation under climate change.

Ecosphere↗

Global change-driven use of onshore habitat impacts polar bear faecal microbiota

The gut microbiota plays a critical role in host health, yet remains poorly studied in wild species. Polar bears (Ursus maritimus), key indicators of Arctic ecosystem health and environmental change, are currently affected by rapid shifts in habitat that may alter gut homeostasis. Declining sea ice has led to a divide in the southern Beaufort Sea polar bear subpopulation such that an increasing proportion of individuals now inhabit onshore coastal regions during the open-water period (‘onshore bears’) while others continue to exhibit their typical behaviour of remaining on the ice (‘offshore bears’). We propose that bears that have altered their habitat selection in response to climate change will exhibit a distinct gut microbiota diversity and composition, which may ultimately have important consequences for their health. Here, we perform the first assessment of abundance and diversity in the faecal microbiota of wild polar bears using 16S rRNA Illumina technology. We find that bacterial diversity is significantly higher in onshore bears compared to offshore bears. The majority of unique bacterial taxa for onshore bears belonged to the phyla Proteobacteria (a proposed indicator of poor health in adult humans), whereas for offshore bears, Firmicutes (associated with adiposity) dominated. We conclude that climate-driven changes in polar bear land use are associated with distinct microbial communities. In doing so, we present the first case of global change mediated alterations in the gut microbiota of a free-roaming wild animal.

Alaska↗

Influence of water temperature and biotic interactions on the distribution of westslope cutthroat trout (Oncorhynchus clarkii lewisi) in a population stronghold under climate change

Climate warming is expected to have substantial impacts on native trout across the Rocky Mountains, but there is little understanding of how these changes affect future distributions of co-occurring native fishes within population strongholds. We used mixed-effects logistic regression to investigate the role of abiotic (e.g., temperature) and biotic factors (bull trout presence, Salvelinus confluentus ) on distributions of westslope cutthroat trout ( Oncorhynchus clarkii lewisi ; WCT) in the North Fork Flathead River, USA and Canada. The probability of WCT presence increased with stream temperature and decreased with channel gradient and bull trout presence, yet the effect of bull trout was reduced with increasing pool densities. Combining this model with spatially explicit stream temperature projections, we predict a 29% increase in suitable habitat under high emissions through 2075, with gains at mid-elevation sites predicted to exceed bull trout thermal tolerances and high-elevation sites expected to become more thermally suitable for WCT. Our study illustrates the importance of considering abiotic and biotic drivers to assess species response to climate change, helping to guide local-scale climate adaptation and management.

Alberta, British Columbia, Montana↗

A multi-model framework for simulating wildlife population response to land-use and climate change

Reliable assessments of how human activities will affect wildlife populations are essential for making scientifically defensible resource management decisions. A principle challenge of predicting effects of proposed management, development, or conservation actions is the need to incorporate multiple biotic and abiotic factors, including land-use and climate change, that interact to affect wildlife habitat and populations through time. Here we demonstrate how models of land-use, climate change, and other dynamic factors can be integrated into a coherent framework for predicting wildlife population trends. Our framework starts with land-use and climate change models developed for a region of interest. Vegetation changes through time under alternative future scenarios are predicted using an individual-based plant community model. These predictions are combined with spatially explicit animal habitat models to map changes in the distribution and quality of wildlife habitat expected under the various scenarios. Animal population responses to habitat changes and other factors are then projected using a flexible, individual-based animal population model. As an example application, we simulated animal population trends under three future land-use scenarios and four climate change scenarios in the Cascade Range of western Oregon. We chose two birds with contrasting habitat preferences for our simulations: winter wrens (Troglodytes troglodytes), which are most abundant in mature conifer forests, and song sparrows (Melospiza melodia), which prefer more open, shrubby habitats. We used climate and land-use predictions from previously published studies, as well as previously published predictions of vegetation responses using FORCLIM, an individual-based forest dynamics simulator. Vegetation predictions were integrated with other factors in PATCH, a spatially explicit, individual-based animal population simulator. Through incorporating effects of landscape history and limited dispersal, our framework predicted population changes that typically exceeded those expected based on changes in mean habitat suitability alone. Although land-use had greater impacts on habitat quality than did climate change in our simulations, we found that small changes in vital rates resulting from climate change or other stressors can have large consequences for population trajectories. The ability to integrate bottom-up demographic processes like these with top-down constraints imposed by climate and land-use in a dynamic modeling environment is a key advantage of our approach. The resulting framework should allow researchers to synthesize existing empirical evidence, and to explore complex interactions that are difficult or impossible to capture through piecemeal modeling approaches. ?? 2008 Elsevier B.V.

Ecological Modelling↗

Insects in high-elevation streams: Life in extreme environments imperiled by climate change

Climate change is altering conditions in high-elevation streams worldwide, with largely unknown effects on resident communities of aquatic insects. Here, we review the challenges of climate change for high-elevation aquatic insects and how they may respond, focusing on current gaps in knowledge. Understanding current effects and predicting future impacts will depend on progress in three areas. First, we need better descriptions of the multivariate physical challenges and interactions among challenges in high-elevation streams, which include low but rising temperatures, low oxygen supply and increasing oxygen demand, high and rising exposure to ultraviolet radiation, low ionic strength, and variable but shifting flow regimes. These factors are often studied in isolation even though they covary in nature and interact in space and time. Second, we need a better mechanistic understanding of how physical conditions in streams drive the performance of individual insects. Environment-performance links are mediated by physiology and behavior, which are poorly known in high-elevation taxa. Third, we need to define the scope and importance of potential responses across levels of biological organization. Short-term responses are defined by the tolerances of individuals, their capacities to perform adequately across a range of conditions, and behaviors used to exploit local, fine-scale variation in abiotic factors. Longer term responses to climate change, however, may include individual plasticity and evolution of populations. Whether high-elevation aquatic insects can mitigate climatic risks via these pathways is largely unknown.

Global Change Biology↗

Testing hypotheses on distribution shifts and changes in phenology of imperfectly detectable species

With ongoing climate change, many species are expected to shift their spatial and temporal distributions. To document changes in species distribution and phenology, detection/non-detection data have proven very useful. Occupancy models provide a robust way to analyse such data, but inference is usually focused on species spatial distribution, not phenology. We present a multi-season extension of the staggered-entry occupancy model of Kendall et al . (2013, Ecology , 94, 610), which permits inference about the within-season patterns of species arrival and departure at sampling sites. The new model presented here allows investigation of species phenology and spatial distribution across years, as well as site extinction/colonization dynamics. We illustrate the model with two data sets on European migratory passerines and one data set on North American treefrogs. We show how to derive several additional phenological parameters, such as annual mean arrival and departure dates, from estimated arrival and departure probabilities. Given the extent of detection/non-detection data that are available, we believe that this modelling approach will prove very useful to further understand and predict species responses to climate change.

Methods in Ecology and Evolution↗

Characterizing spatiotemporal patterns of crop phenology across North America during 2000–2016 using satellite imagery and agricultural survey data

Crop phenology represents an integrative indicator of climate change and plays a vital role in terrestrial carbon dynamics and sustainable agricultural development. However, spatiotemporal variations of crop phenology remain unclear at large scales. This knowledge gap has hindered our ability to realistically quantify the biogeochemical dynamics in agroecosystems, predict future climate, and make informed decisions for climate change mitigation and adaptation. In this study, we improved an EVI-curve-based approach and used it to detect spatiotemporal patterns in cropping intensity and five major phenological stages over North America during 2000–2016 using vegetation index in combination with agricultural survey data and other ancillary maps. Our predicted crop phenological stages showed strong linear relationships with the survey-based datasets, with R 2 , RMSEs, and MAEs in the ranges of 0.35 –0.99, three to ten days, and two to eight days, respectively. During the study period, the planting dates were advanced by 0.60 days/year ( p < 0.01), and harvesting dates were delayed by 0.78 days/year ( p < 0.01) over North America. A minimum temperature increase by 1 °C caused a 4.26-day planting advance (r = −0.50, p < 0. 01) or a 0.66-day harvest delay (r = 0.10, p < 0.01). While, a higher maximum temperature resulted in a planting advance by 4.48 days/°C (r = −0.62, p < 0.01) or a harvest advance by 2.22 days/°C (r = −0.40, p < 0.01). Our analysis illustrated evident spatiotemporal variations in crop phenology in response to climate change and management practices. The derived crop phenological datasets and cropping intensity maps can be used in regional climate assessments and in developing adaptation strategies.

ISPRS Journal of Photogrammetry and Remote Sensing↗

Modeling responses of large-river fish populations to global climate change through downscaling and incorporation of predictive uncertainty

Climate change operates over a broad range of spatial and temporal scales. Understanding its effects on ecosystems requires multi-scale models. For understanding effects on fish populations of riverine ecosystems, climate predicted by coarse-resolution Global Climate Models must be downscaled to Regional Climate Models to watersheds to river hydrology to population response. An additional challenge is quantifying sources of uncertainty given the highly nonlinear nature of interactions between climate variables and community level processes. We present a modeling approach for understanding and accomodating uncertainty by applying multi-scale climate models and a hierarchical Bayesian modeling framework to Midwest fish population dynamics and by linking models for system components together by formal rules of probability. The proposed hierarchical modeling approach will account for sources of uncertainty in forecasts of community or population response. The goal is to evaluate the potential distributional changes in an ecological system, given distributional changes implied by a series of linked climate and system models under various emissions/use scenarios. This understanding will aid evaluation of management options for coping with global climate change. In our initial analyses, we found that predicted pallid sturgeon population responses were dependent on the climate scenario considered.

Missouri River↗

MODIS phenology image service ArcMap toolbox

Seasonal change is important to consider when managing conservation areas at landscape scales. The study of such patterns throughout the year is referred to as phenology. Recurring life-cycle events that are initiated and driven by environmental factors include animal migration and plant flowering. Phenological events capture public attention, such as fall color change in deciduous forests, the first flowering in spring, and for those with allergies, the start of the pollen season. These events can affect our daily lives, provide clues to help understand and manage ecosystems, and provide evidence of how climate variability can affect the natural cycle of plants and animals. Phenological observations can be gathered at a range of scales, from plots smaller than an acre to landscapes of hundreds to thousands of acres. Linking these observations to diverse disciplines such as evolutionary biology or climate sciences can help further research in species and ecosystem responses to climate change scenarios at appropriate scales. A cooperative study between the National Park Service (NPS), the U.S. Geological Survey (USGS), and the National Aeronautics and Space Administration (NASA) has been exploring how satellite information can be used to summarize phenological patterns observed at the park or landscape scale and how those summaries can be presented to both park managers and visitors. This study specifically addressed seasonal changes in plants, including the onset of growth, photosynthesis in the spring, and the senescence of deciduous vegetation in the fall. The primary objective of the work is to demonstrate that seasonality even in protected areas changes considerably across years. A major challenge is to decouple natural variability from possible trends—directional change that can lead to a permanent and radically different ecosystem state. Trends can be either a gradual degradation of the landscape (often from external influences) or steady improvement (by implementing long-term conservation plans). In either case, it is important to first grasp the magnitude of natural variation so that it is not confused with actual trends. This work used existing and freely available remote sensing data, specifically the NASA-funded 250-meter (m) spatial resolution land-surface phenology product for North America. This product is calculated from an annual record of vegetation health observed by NASA’s Moderate Resolution Imaging Spectroradiometer (MODIS) instrument. The land-surface phenology product is, in essence, a method to summarize all the observations throughout a year into a few key, ecologically relevant “metrics”.

Open-File Report↗

Tree mortality from drought, insects, and their interactions in a changing climate

Climate change is expected to drive increased tree mortality through drought, heat stress, and insect attacks, with manifold impacts on forest ecosystems. Yet, climate-induced tree mortality and biotic disturbance agents are largely absent from process-based ecosystem models. Using data sets from the western USA and associated studies, we present a framework for determining the relative contribution of drought stress, insect attack, and their interactions, which is critical for modeling mortality in future climates. We outline a simple approach that identifies the mechanisms associated with two guilds of insects &ndash; bark beetles and defoliators &ndash; which are responsible for substantial tree mortality. We then discuss cross-biome patterns of insect-driven tree mortality and draw upon available evidence contrasting the prevalence of insect outbreaks in temperate and tropical regions. We conclude with an overview of tools and promising avenues to address major challenges. Ultimately, a multitrophic approach that captures tree physiology, insect populations, and tree&ndash;insect interactions will better inform projections of forest ecosystem responses to climate change.

New Phytologist↗

Flow regime, temperature, and biotic interactions drive differential declines of trout species under climate change

Broad-scale studies of climate change effects on freshwater species have focused mainly on temperature, ignoring critical drivers such as flow regime and biotic interactions. We use downscaled outputs from general circulation models coupled with a hydrologic model to forecast the effects of altered flows and increased temperatures on four interacting species of trout across the interior western United States (1.01 million km 2 ), based on empirical statistical models built from fish surveys at 9,890 sites. Projections under the 2080s A1B emissions scenario forecast a mean 47% decline in total suitable habitat for all trout, a group of fishes of major socioeconomic and ecological significance. We project that native cutthroat trout Oncorhynchus clarkii , already excluded from much of its potential range by nonnative species, will lose a further 58% of habitat due to an increase in temperatures beyond the species' physiological optima and continued negative biotic interactions. Habitat for nonnative brook trout Salvelinus fontinalis and brown trout Salmo trutta is predicted to decline by 77% and 48%, respectively, driven by increases in temperature and winter flood frequency caused by warmer, rainier winters. Habitat for rainbow trout, Oncorhynchus mykiss , is projected to decline the least (35%) because negative temperature effects are partly offset by flow regime shifts that benefit the species. These results illustrate how drivers other than temperature influence species response to climate change. Despite some uncertainty, large declines in trout habitat are likely, but our findings point to opportunities for strategic targeting of mitigation efforts to appropriate stressors and locations.

Proceedings of the National Academy of Sciences of↗

Expression plasticity regulates intraspecific variation in the acclimatization potential of a reef-building coral

Phenotypic plasticity is an important ecological and evolutionary response for organisms experiencing environmental change, but the ubiquity of this capacity within coral species and across symbiont communities is unknown. We exposed ten genotypes of the reef-building coral Montipora capitata with divergent symbiont communities to four thermal pre-exposure profiles and quantified gene expression before stress testing 4 months later. Here we show two pre-exposure profiles significantly enhance thermal tolerance despite broadly different expression patterns and substantial variation in acclimatization potential based on coral genotype. There was no relationship between a genotype’s basal thermal sensitivity and ability to acquire heat tolerance, including in corals harboring naturally tolerant symbionts, which illustrates the potential for additive improvements in coral response to climate change. These results represent durable improvements from short-term stress hardening of reef-building corals and substantial cryptic complexity in the capacity for plasticity.

Nature Communications↗

The effect of Holocene temperature fluctuations on the evolution and ecology of Neotoma (woodrats) in Idaho and northwestern Utah

Animals respond to climatic change by adapting or by altering distributional patterns. How an animal responds is influenced by where it is positioned within its geographic range; the probability of extirpation is increased near range boundaries. Here, we examine the impact of Holocene climatic fluctuations on a small mammalian herbivore, the bushy-tailed woodrat (Neotoma cinerea), at five locations within south central Idaho and northwestern Utah. Previous work demonstrated that woodrats adapt to temperature shifts by altering body size. We focus here on the relationship between body mass, temperature, and location within the geographic range. Body mass is estimated by measuring fossil fecal pellets, a technique validated in earlier work. Overall, we find the predicted phenotypic response to climate change: Animals were larger during cold periods, and smaller during warmer episodes. However, we also identify several time periods when changes in environmental temperature exceeded the adaptive flexibility of N. cinerea. A smaller-bodied species, the desert woodrat (N. lepida) apparently invaded lower elevation sites during the mid-Holocene, despite being behaviorally and physically subordinate to N. cinerea. Analysis of contemporary patterns of body size and thermal tolerances for both woodrat species suggests this was because of the greater heat tolerance of N. lepida. The robust spatial relationship between contemporary body size and ambient temperature is used as a proxy to reconstruct local climate during the Holocene. ?? 2003 Elsevier Science (USA). All rights reserved.

Quaternary Research↗