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At least 307 records · Page 17Linked to original sources

Distributions of pesticides and organic contaminants between water and suspended sediment, San Francisco Bay, California

Suspended-sediment and water samples were collected from San Francisco Bay in 1991 during low river discharge and after spring rains. All samples were analyzed for organophosphate, carbamate, and organochlorine pesticides; petroleum hydrocarbons; biomarkers; and polynuclear aromatic hydrocarbons. The objectives were to determine the concentrations of these contaminants in water and suspended sediment during two different hydrologic conditions and to determine partition coefficients of the contaminants between water and sediment. Concentrations of hydrophobic contaminants, such as polynuclear aromatic hydrocarbons, varied with location of sample collection, riverine discharge, and tidal cycle. Concentrations of hydrophobic contaminants in suspended sediments were highest during low river discharge but became diluted as agricultural soils entered the bay after spring rains. Polynuclear aromatic hydrocarbons defined as dissolved in the water column were not detected. The concentrations sorbed on suspended sediments were variable and were dependent on sediment transport patterns in the bay. In contrast, the relatively hydrophilic organophosphate pesticides, such as chlorpyrifos and diazinon, has a more uniform concentration in suspended sediment. These pesticides were detected only after spring rains. Most of the measured diazinon, at least 98% for all samples, was in the dissolved phase. Measured partition coefficients for diazinon generally were uniform, which suggests that suspended-sediment concentrations were close to equilibrium with dissolved concentrations. The concentration of diazinon sorbed to suspended sediments, at any given sampling site, was driven primarily by the more abundant solution concentration. The concentrations of diazinon sorbed to suspended sediments, therefore, were independent of the patterns of sediment movement.

California

Early chromite mining and agricultural clearance: Opportunities for the investigation of agricultural sediment dynamics in the Eastern Piedmont (USA)

Many flood plains in the Eastern Piedmont (USA) are buried under deposits of sediment resulting from European agricultural clearance. Classic radioisotopic dating techniques cover temporal periods too short (137Cs, 210Pb) or too long (14C) to reliably date sediments deposited during periods of local European activity (1660-1900). Moreover, many potential biomarkers, such as pollen, degrade in oxic flood plain sediments. In the Baltimore, Maryland (USA) region, early chromite mining (1820 - 1880) occurred during periods of rapid agricultural clearance. Use of chromium (Cr) chemostratigraphic profiles in flood plain sediments tied to historical mining activity can provide improved precision in overbank accumulation rates and timing. Sediment cores were collected from the Red Run basin, which is part of the Baltimore Ecosystem Study, an urban Long-Term Ecological Research site. Trace metal chemostratigraphic profiles were measured and peaks in Cr concentration tied to historic mining activity. Dates from Cr chemostratigraphic profiles were combined with 137Cs dating to reconstruct flood plain sedimentation rates. Red Run early sedimentation rates (1820 - 1880) were higher (0.45 - 1.19 cm/yr) than more recent (1880 - 1963) rates (0.08 - 0.46 cm/yr). This indicates that Piedmont flood plain vertical sediment accumulation might have peaked before the peak in agricultural clearance, earlier than assumed by regional models. The Cr chemostratigraphy is applicable to a wider region including much of the Maryland and Pennsylvania (USA) Piedmont.

American Journal of Science

Chemical and ancillary data associated with bed sediment, young of year Bluefish ( Pomatomus saltatrix ) tissue, and mussel ( Mytilus edulis and Geukensia demissa ) tissue collected after Hurricane Sandy in bays and estuaries of New Jersey and New York, 2013–14

This report describes the methods and data associated with a reconnaissance study of young of year bluefish and mussel tissue samples as well as bed sediment collected as bluefish habitat indicators during August 2013–April 2014 in New Jersey and New York following Hurricane Sandy in October 2012. This study was funded by the Disaster Relief Appropriations Act of 2013 (PL 113-2) and was conducted by the U.S. Geological Survey (USGS) in cooperation with the National Oceanic and Atmospheric Administration (NOAA). Young of year Pomatomus saltatrix (bluefish) were collected from nine sites in New Jersey (N.J.) and New York (N.Y.) including Barnegat Bay, N.J., Sandy Hook Bay, N.J., Jamaica Bay, N.Y., and Great South Bay, N.Y., and analyzed for indicators of health and chemical contamination. At each bluefish sampling location, bed sediment was also collected and analyzed for a suite of contaminants. Resident mussels, Mytilus edulis (blue mussels) and (or) Geukensia demissa (ribbed mussels), were collected from 11 historic NOAA Mussel Watch Program sites along the N.J. and N.Y. coastlines in the winter/spring of 2014 and analyzed for contaminants. Individual age of a subset of the mussels sampled was also determined at each site. Bed sediment samples were analyzed for a suite of organic contaminants including 34 polychlorinated biphenyl (PCB) congeners, 28 polybrominated diphenyl ether (PBDE) congeners, 24 organochlorine pesticides (OCPs), 53 polycyclic aromatic hydrocarbons (PAHs) and alkylated PAHs, 33 aliphatic hydrocarbons (AHs), and 10 petroleum biomarkers (steranes and hopanes). Bed sediment collected from the Navesink River (Sandy Hook, N.J.), Metedeconk River (Barnegat Bay, N.J.), and Toms River (Barnegat Bay, N.J.) had the highest concentrations of contaminants compared to the other sites. Bluefish and mussel tissue collected throughout the study area was analyzed for 34 PCB congeners, 28 PBDE congeners, and 24 OCPs. Thirty-three PCB congeners, 22 PBDE congeners, and 24 OCPs were detected in the bluefish analyzed. The highest median concentrations of total PCBs were present in tissue from Jamaica Bay, N.Y., whereas the highest median concentrations of total PBDEs and total OCPs were present in tissue from Sandy Hook Bay. Of the OCPs detected, p,p’ -DDE was found in 99 percent (%) of the tissue samples and at the highest median concentrations compared to the other OCPs. Fish health assessments were conducted on 20 fish from the 4 bays. Results indicate that the sex ratio and the mean total length varied by site. Physical fish damage, such as lesions and parasites, was observed in fish from all four bays. The most common parasite observed visually was the presence of Livoneca redmanii , an ectoparasitic gill isopod, which can cause localized gill erosion. The prevalence of the gill isopod infestation ranged from 20% at Great South Bay, N.Y., to 35% at Jamaica Bay, N.Y. Twenty three PCB congeners, 9 PBDE congeners, and 20 OCPs were detected in composite mussel samples collected throughout the study area. The co-eluting PCB congeners 153 and 132, PBDE 47, 99, and 100, and p,p’ -DDE were detected in samples from each site. The highest median concentrations of PCBs and PBDEs were present in mussels from Raritan Bay, N.Y., whereas the highest median concentrations of OCPs were present in mussels from Fire Island Inlet, N.Y., and Shark River, N.J. Mytilus edulis (blue mussels) and Geukensia demissa (ribbed mussels) were thin-sectioned and aged. The blue mussels collected ranged in age from 4 to 13 years, and the ribbed mussels ranged in age from 3 to 12 years.

New Jersey, New York

The Midwest Stream Quality Assessment

In 2013, the U.S. Geological Survey (USGS) National Water-Quality Assessment Program (NAWQA) and USGS Columbia Environmental Research Center (CERC) will be collaborating with the U.S. Environmental Protection Agency (EPA) National Rivers and Streams Assessment (NRSA) to assess stream quality across the Midwestern United States. The sites selected for this study are a subset of the larger NRSA, implemented by the EPA, States and Tribes to sample flowing waters across the United States ( http://water.epa.gov/type/rsl/monitoring/riverssurvey/index.cfm ). The goals are to characterize water-quality stressors—contaminants, nutrients, and sediment—and ecological conditions in streams throughout the Midwest and to determine the relative effects of these stressors on aquatic organisms in the streams. Findings will contribute useful information for communities and policymakers by identifying which human and environmental factors are the most critical in controlling stream quality. This collaborative study enhances information provided to the public and policymakers and minimizes costs by leveraging and sharing data gathered under existing programs. In the spring and early summer, NAWQA will sample streams weekly for contaminants, nutrients, and sediment. During the same time period, CERC will test sediment and water samples for toxicity, deploy time-integrating samplers, and measure reproductive effects and biomarkers of contaminant exposure in fish or amphibians. NRSA will sample sites once during the summer to assess ecological and habitat conditions in the streams by collecting data on algal, macroinvertebrate, and fish communities and collecting detailed physical-habitat measurements. Study-team members from all three programs will work in collaboration with USGS Water Science Centers and State agencies on study design, execution of sampling and analysis, and reporting.

Midwest

Reconnaissance of Macondo-1 well oil in sediment and tarballs from the northern Gulf of Mexico shoreline, Texas to Florida

Hydrocarbons were extracted and analyzed from sediment and tarballs collected from the northern Gulf of Mexico (nGOM) coast that is potentially impacted by Macondo-1 (M-1) well oil. The samples were analyzed for a suite of diagnostic geochemical biomarkers. Aided by multivariate statistical analysis, the M-1 well oil has been identified in sediment and tarballs collected from Louisiana, Alabama, Mississippi, and Florida. None of the sediment hydrocarbon extracts from Texas correlated with the M-1 well oil. Oil-impacted sediments are confined to the shoreline adjacent to the cumulative oil slick of the Deepwater Horizon oil spill, and no impact was observed outside of this area.

Open-File Report

Organic contaminants, trace and major elements, and nutrients in water and sediment sampled in response to the Deepwater Horizon oil spill

Beach water and sediment samples were collected along the Gulf of Mexico coast to assess differences in contaminant concentrations before and after landfall of Macondo-1 well oil released into the Gulf of Mexico from the sinking of the British Petroleum Corporation's Deepwater Horizon drilling platform. Samples were collected at 70 coastal sites on the Gulf of Mexico between May 7 and July 7, 2010, to document baseline, "pre-landfall" conditions. A subset of these sites was resampled during October 4 to 14, 2010, after oil had made landfall on the Gulf of Mexico coast ("post-landfall") to determine if actionable concentrations of oil were present along shorelines. Few organic contaminants were detected in water; their detection frequencies were generally low and similar in pre-landfall and post-landfall samples. Only one organic contaminant, toluene, had significantly higher concentrations in post-landfall than pre-landfall water samples. No samples exceeded any human-health benchmarks, and only one sample exceeded an aquatic-life benchmark-the toxic-unit benchmark for polycyclic aromatic hydrocarbons (PAH) mixtures was exceeded in one post-landfall water sample from Louisiana. No exceedance was observed in the corresponding pre-landfall water sample at this site. In sediment, several PAHs were detected at over 20 percent of sites. Concentrations of 3 parent PAHs and 17 alkylated PAH groups were significantly higher in post-landfall samples than pre-landfall samples. One pre-landfall sample from Texas exceeded the sediment toxic-unit benchmark for PAH mixtures; this site was not sampled during the post-landfall period, so no comparison between sampling periods could be made. Twenty-seven percent of sediment samples exceeded empirical sediment-quality benchmarks (upper screening values) for PAHs, indicating these samples are in the probable-effect range. A higher percentage of post-landfall samples exceeded upper screening-value benchmarks (37 percent) than did pre-landfall samples (22 percent), but there was no significant difference in the proportion of samples exceeding one or more benchmarks between paired pre-landfall and post-landfall samples. Seven sites had the largest concentration differences between post-landfall and pre-landfall samples for fifteen alkylated PAHs. Five of these seven sites (1 site in Louisiana, 1 in Mississippi, and 3 in Alabama) were identified on the basis of diagnostic geochemical biomarkers as containing Macondo-1 oil in post-landfall sediments and tarballs, as described in a companion report by Rosenbauer and others (2010). For trace and major elements in water, analytical reporting levels for several elements were highly variable; after censoring to a common reporting threshold, concentrations were significantly different between pre-landfall and post-landfall samples for a few elements, all of which are elements in seawater. No human-health benchmarks were exceeded, although these were available for only two elements. Aquatic-life benchmarks for trace elements were exceeded in almost 50 percent of water samples. Post-landfall samples exceeded one or more acute benchmarks in 21 percent, and chronic benchmarks in 93 percent of samples, compared to 1 percent (acute) and 39 percent (chronic) for pre-landfall samples. The elements responsible for the most exceedances in post-landfall samples were boron (48 samples), copper (22), and manganese (12). Nickel and vanadium, which U.S. Environmental Protection Agency specifically identified as relevant to the oil spill, were responsible for exceedances in only one of the fifty-two post-landfall samples with exceedances. These results represent the minimum number of exceedances for several trace elements because a substantial number of samples could not be compared with benchmarks because the element was determined during only one sampling period (boron and vanadium) or the reporting level for the sample was higher than the applicable benchmark value (for example, cobalt, copper, lead, and nickel). The high and variable reporting levels for trace elements in water also precluded the statistical comparison between sampling periods of the proportion of samples exceeding benchmarks. For trace elements in whole (unsieved) sediment, 47 percent of samples exceeded empirical upper screening-value benchmarks, indicating these samples are in the probable-effect range. However, there was no significant difference in the proportion of samples exceeding one or more benchmarks between paired pre-landfall post-landfall samples. Benchmark exceedance frequencies could be conservatively high, because they are based on measurements of total trace-element concentrations, including the sediment matrix. In fine sediment (the less than 63-micrometer sediment fraction), one or more trace or major elements were anthropogenically enriched relative to national baseline values for U.S. streams for almost all sediment samples (123 of 124). Sixteen percent of sediment samples exceeded upper screening-value benchmarks for, and were enriched in, one or more of the element(s) barium (in 14 samples), vanadium (5), aluminum (3), manganese (3), arsenic (2), chromium (2), and cobalt (1). These samples, collected from Louisiana and Texas, were evenly divided between the pre-landfall (9 samples) and post-landfall (10 samples) periods. Considering all the information evaluated in this report, there were significant differences between pre-landfall and post-landfall samples for PAH concentrations in sediment. Pre-landfall and post-landfall samples did not differ significantly in concentrations or benchmark exceedances for most organics in water or trace elements in sediment. For trace elements in water, aquatic-life benchmarks were exceeded in almost 50 percent of samples, but the high and variable analytical reporting levels precluded statistical comparison of benchmark exceedances between sampling periods. Concentrations of several PAH compounds in sediment were significantly higher in post-landfall samples than pre-landfall samples, and five of seven sites with the largest differences in PAH concentrations also had diagnostic geochemical evidence of Deepwater Horizon Macondo-1 oil from Rosenbauer and others (2010).

Open-File Report

A multi-metric assessment of environmental contaminant exposure and effects in an urbanized reach of the Charles River near Watertown, Massachusetts

The Charles River Project provided an opportunity to simultaneously deploy a combination of biomonitoring techniques routinely used by the U.S. Geological Survey National Water Quality Assessment Program, the Biomonitoring of Environmental Status and Trends Project, and the Contaminant Biology Program at an urban site suspected to be contaminated with polycyclic aromatic hydrocarbons. In addition to these standardized methods, additional techniques were used to further elucidate contaminant exposure and potential impacts of exposure on biota. The purpose of the study was to generate a comprehensive, multi-metric data set to support assessment of contaminant exposure and effects at the site. Furthermore, the data set could be assessed to determine the relative performance of the standardized method suites typically used by the National Water Quality Assessment Program and the Biomonitoring of Environmental Status and Trends Project, as well as the additional biomonitoring methods used in the study to demonstrate ecological effects of contaminant exposure. The Contaminant Effects Workgroup, an advisory committee of the U.S. Geological Survey/Contaminant Biology Program, identified polycyclic aromatic hydrocarbons as the contaminant class of greatest concern in urban streams of all sizes. The reach of the Charles River near Watertown, Massachusetts, was selected as the site for this study based on the suspected presence of polycyclic aromatic hydrocarbon contamination and the presence of common carp ( Cyprinus carpio ), largemouth bass ( Micropterus salmoides ), and white sucker ( Catostomus commersoni ). All of these fish have extensive contaminant-exposure profiles related to polycyclic aromatic hydrocarbons and other environmental contaminants. This project represented a collaboration of universities, Department of the Interior bureaus including multiple components of the USGS (Biological Resources Discipline and Water Resources Discipline Science Centers, the Contaminant Biology Program, and the Status and Trends of Biological Resources Program), and the U.S. Fish and Wildlife Service. Samples for analyzing water chemistry, sediment chemistry and toxicity, fish community structure, tissue chemistry, and fish (20 carp, 20 bass, and 40 white sucker) and invertebrate pathology were collected in late August, 2005. This report provides results from the analyses of fish pathology, biomarkers of exposure and effects (reproductive, carcinogenic, genotoxic, and immunologic), sediment chemistry, toxicity, and fish and invertebrate community structure.

Massachusetts

Subsurface and petroleum geology of the southwestern Santa Clara Valley ("Silicon Valley"), California

Gravity anomalies, historical records of exploratory oil wells and oil seeps, new organic-geochemical results, and new stratigraphic and structural data indicate the presence of a concealed, oil-bearing sedimentary basin beneath a highly urbanized part of the Santa Clara Valley, Calif. A conspicuous isostatic-gravity low that extends about 35 km from Palo Alto southeastward to near Los Gatos reflects an asymmetric, northwest-trending sedimentary basin comprising low-density strata, principally of Miocene age, that rest on higher-density rocks of Mesozoic and Paleogene(?) age. Both gravity and well data show that the low-density rocks thin gradually to the northeast over a distance of about 10 km. The thickest (approx 4 km thick) accumulation of low-density material occurs along the basin's steep southwestern margin, which may be controlled by buried, northeast-dipping normal faults that were active during the Miocene. Movement along these hypothetical normal faults may been contemporaneous (approx 17–14 Ma) with sedimentation and local dacitic and basaltic volcanism, possibly in response to crustal extension related to passage of the northwestward-migrating Mendocino triple junction. During the Pliocene and Quaternary, the normal faults and Miocene strata were overridden by Mesozoic rocks, including the Franciscan Complex, along northeastward-vergent reverse and thrust faults of the Berrocal, Shannon, and Monte Vista Fault zones. Movement along these fault zones was accompanied by folding and tilting of strata as young as Quaternary and by uplift of the modern Santa Cruz Mountains; the fault zones remain seismically active. We attribute the Pliocene and Quaternary reverse and thrust faulting, folding, and uplift to compression caused by local San Andreas Fault tectonics and regional transpression along the Pacific-North American Plate boundary. Near the southwestern margin of the Santa Clara Valley, as many as 20 exploratory oil wells were drilled between 1891 and 1929 to total depths as great as 840 m. At least one pump unit is still standing. Although no lithologic or paleontologic samples are available from the wells, driller's logs indicate the presence of thick intervals of brown shale and sandstone resembling nearby outcrops of the Miocene Monterey Formation. Small amounts of oil and gas were observed in several wells, but commercial production was never established. Oil from the Peck well in Los Gatos is highly biodegraded, contains biomarkers commonly found in oils derived from the Monterey Formation, and has a stable-C-isotopic (d13C) composition of –23.32 permil, indicating derivation from a Miocene Monterey Formation source rock. Preliminary calculations suggest that about 1 billion barrels of oil may have been generated from source rocks within the Monterey Formation in the deepest part of the subsurface sedimentary basin between Los Gatos and Cupertino. Most of this oil was probably lost to biodegradation, oxidation, and leakage to the surface, but some oil may have accumulated in as-yet-undiscovered structural and stratigraphic traps along the complex structural boundary between the Santa Clara Valley and the Santa Cruz Mountains. Although some of these undiscovered accumulations of oil may be of commercial size, future petroleum exploration is unlikely because most of the area is currently devoted to residential, recreational, commercial, and industrial uses.

California

Composition of natural gas and crude oil produced from 10 wells in the Lower Silurian "Clinton" Sandstone, Trumbull County, Ohio

Natural gases and associated crude oils in the “Clinton” sandstone, Medina Group sandstones, and equivalent Tuscarora Sandstone in the northern Appalachian basin are part of a regional, continuous-type or basin-centered accumulation. The origin of the hydrocarbon charge to regional continuoustype accumulations is poorly understood. We have analyzed the molecular and stable isotopic composition of gases and oils produced from 10 wells in the “Clinton” sandstone in Trumbull County, Ohio, in an initial attempt to identify the characteristics of the accumulated fluids. The analyses show that the fluids have remarkably uniform compositions that are similar to previously published analyses of oils (Cole and others, 1987) and gases (Laughrey and Baldasarre, 1998) in Early Silurian reservoirs elsewhere in Ohio; however, geochemical parameters in the oils and gases suggest that the fluids have experienced higher levels of thermal stress than the present-day burial conditions of the reservoir rocks. The crude oils have an unusual geochemical characteristic: they do not contain detectable levels of sterane and triterpane biomarkers. The origin of these absences is unknown.

Ohio

Hydrogeology, water quality, and ecology of Anderton Branch near the Quail Hollow Landfill, Bedford County, Tennessee, 1995-99

The Quail Hollow Landfill, located in southeastern Bedford County on the Highland Rim overlooking the Central Basin karst region of Tennessee, is constructed on the gravelly, clay-rich residuum of the Fort Payne Formation of Mississippian age. A conceptual hydrologic model of the landfill indicated that Anderton Branch was at risk of being affected by the landfill. Ground water flowing beneath the landfill mixes with percolating rainwater that has passed through the landfill and discharges to the surface from numerous weeps, seeps, and springs present in the area. Anderton Branch, adjacent to the landfill site on the north and east, receives most of the discharge from these weeps, seeps, and springs. Anderton Branch also receives water from the Powell Branch drainage basin to the west and south because of diverted flow of ground water through Harrison Spring Cave. The U.S. Geological Survey, in cooperation with the Bedford County Solid Waste Authority, conducted a study to evaluate the effect of the Quail Hollow Landfill on ground- and surface-water quality. During storm runoff, specific conductance was elevated, and cadmium, iron, manganese, lead, and nickel concentrations in Anderton Branch frequently exceeded maximum contaminant levels for drinking water for the State of Tennessee. High chloride inputs to Anderton Branch were detected at two locations?a barnyard straddling the stream and a tributary draining a pond that receives water directly from the landfill. The chloride inputs probably contribute to chloride load levels that are three times higher for Anderton Branch than for the control stream Anthony Branch. Although toxic volatile organic compounds were detected in water from monitoring wells at the landfill, no organic contaminants were detected in domestic water wells adjacent to the landfill or in Anderton Branch. Sons Spring, a karst spring near the landfill, has been affected by the landfill as indicated by an increase in chloride concentrations from 4 milligrams per liter in 1974 to 59 milligrams per liter in 1996. Analysis of water samples from Sons Spring detected concentrations of nickel that exceeded primary drinking-water standards and Tennessee Department of Environment and Conservation fish and aquatic life chronic standards. Trichloroethene, 1,1-dichloroethene, and 1,1-dichloroethane also were detected at Sons Spring. The presence of these chlorinated solvents imply the landfill origin of the contaminants in Sons Spring. Continuous monitoring at Sons Spring indicated a pattern of decreased specific conductance and lower contaminant concentrations after a storm. Contaminant concentrations increased with specific conductance to pre-storm levels after several days. The benthic macroinvertebrate community in Anderton Branch adjacent to the landfill was not different from the communities at control sites upstream and in Anthony Branch. Sons Spring, however, has low abundance and numbers of benthic macroinvertebrate taxa. Toxicity studies using Ceriodaphnia dubia indicated no toxicity in the base flow or storm water in Anderton Branch or in a tributary draining a pond that receives water from the landfill and Sons Spring; however, water collected from Sons Spring resulted in 100 percent mortality to all organisms within 48 hours. High concentrations of nickel were detected in crayfish tissue from control sites and Anderton Branch. Analysis of sediment samples also indicates nickel concentrations are high at control sites upstream of the landfill. Increased levels of the biomarker metallothionein detected in crayfish from Anderton Branch likely are not caused by nickel or cadmium because the levels present in the tissue are not correlated with metallothionein levels. Despite the high levels of certain metals in Anderton Branch during storm flow, the lack of toxicity and the health of the benthic community imply no detectable negative effect from the landfill to the stream. Sons Spring, howe

Scientific Investigations Report

Biomonitoring of Environmental Status and Trends (BEST) Program: Environmental contaminants and their effects on fish in the Columbia River Basin

This project examined and analyzed 560 fish representing eight species from 16 sites in the Columbia River Basin (CRB) from September 1997 to April 1998. Ten of the 16 sampling locations were historical National Contaminant Biomonitoring Program (NCBP) sites where organochlorine and elemental contaminants in fish had been monitored from 1969 through 1986. Five sites were co-located at U.S. Geological Survey (USGS)-National Stream Quality Accounting Network (NASQAN) stations at which water quality is monitored. The sampling location at Marine Park in Vancouver, Washington did not correspond to either of the established monitoring programs. Eight of the sampling locations were located on the Columbia River; three were on the Snake River; two were on the Willamette River, and one site was on each of the Yakima, Salmon and Flathead Rivers. Common carp ( Cyprinus carpio ), black basses ( Micropterus sp. ), and largescale sucker ( Catostomus macrocheilus ) together accounted for 80% of the fish sampled during the study. Fish were weighed and measured then field-examined for external and internal lesions, and liver, spleen, and gonads were weighed to compute somatic indices. Selected tissues and fluids were obtained and preserved for analysis of fish health and reproductive biomarkers. Composite samples of whole fish from each station were grouped by species and gender and analyzed for persistent organic and inorganic contaminants and for dioxin-like activity using H4IIE rat hepatoma cell bioassay.

Columbia River Basin

Biomonitoring of Environmental Status and Trends (BEST) Program: Environmental contaminants and their effects on fish in the Yukon River Basin

This project collected, examined, and analyzed 217 fish representing three species at 10 stations in the U.S. portion of the Yukon River Basin (YRB) from May to October 2002. Four sampling sites were located on the Yukon River; two were located on the Porcupine River, and one site was on each of the Ray, Tanana, Tolavana, and Innoko Rivers. Norther pike ( Esox lucius ), longnose sucker ( Catostomus catostomus ), and burbot ( Lota lota ) were weighed and measured, and examined in the field for external and internal lesions, and liver, spleen, and gonads were weighed to compute somatic indices. Selected tissues and fluids were collected and preserved for analysis of fish health and reproductive biomarkers. Composite samples of whole fish from each station were grouped by species and gender and analyzed for organochlorines and elemental contaminants and for dioxin-like activity using H4IIE rat hepatoma cell bioassay.

Alaska

Effects of lead exposure on birds breeding in the Southeast Missouri Lead Mining District

Lead mining in the Southeast Missouri Lead Mining District began in the 1700s and continued for nearly 300 years; the waste piles associated with smelting, mining, and milling of lead ores have released metal residues that have contaminated soil and water in the region. Previous studies in the district have indicated potential harm to wildlife, including birds, because of elevated lead concentrations associated with mining. Exposure to soil-borne lead was correlated with elevated lead concentrations in tissues, inhibition of δ-aminolevulinic acid dehydratase (δALAD), and renal lesions in birds foraging on ground-dwelling invertebrates at contaminated sites (compared to reference sites) in the Southeast Missouri Lead Mining District. This study assessed reproductive outcomes for songbirds exposed to soil-borne lead in the district, examined the relation between lead concentrations in soils and in tissues of ground-feeding birds and prey species, and compared the results to literature-based toxicity thresholds for lead that are associated with negative effects in birds. Three lead-contaminated sites and three reference sites (with background concentrations of lead and no known mining inputs) were compared in two ways: individually to all other sites or by site type. Additional effects of lead exposure were evaluated by examining concentrations of biomarkers (oxidative stress, lipid peroxidation, and deoxyribonucleic acid damage) in liver tissues, δALAD inhibition, and renal and hepatic microscopic lesions in birds from lead-contaminated and reference sites. Lead concentrations in soil were site-dependent and were also generally heterogeneous within the lead-contaminated sites. Between 17 and 74 percent of all soil samples at contaminated sites had lead concentrations that exceeded a threshold (1,000 milligrams per kilogram [mg/kg] lead in soil) previously associated with adverse physiological effects in birds in the Southeast Missouri Lead Mining District. Lead concentrations in mixed invertebrates from lead-contaminated sites (282 to 2,230 mg/kg dry weight [dw]) indicated that consuming soil-dwelling prey species is a potential exposure pathway for adult birds and their broods. At lead-contaminated sites, lead concentrations in 40.5 percent of blood samples (adults and their broods) were within a subclinical effects range (0.9 to 2.3 mg/kg dw), and 18.7 percent of samples had lead concentrations that exceeded clinical effects criteria (greater than 2.3 mg/kg dw). In contrast, only 2.6 percent of blood samples from reference sites were within the subclinical effects range for lead; all other blood samples from the reference sites had lead concentrations representative of background concentrations (less than 0.9 mg/kg dw). Subclinical and clinical threshold exceedances for lead concentrations in livers and kidneys were similarly more prevalent at the contaminated sites compared to the reference sites. Lead concentrations in blood were positively correlated with lead concentrations in soil, livers, and kidneys. Lead concentrations in blood were negatively correlated with δALAD activity; greater than 50 percent of the birds collected at lead-contaminated sites exhibited injury via greater than 50 percent inhibition of δALAD in blood compared to birds at reference sites. Birds with elevated lead concentrations in tissues also exhibited enhanced oxidative stress. Microscopic lesions in the livers and kidneys of birds had similar rates of occurrence at the contaminated and reference sites, and lesion prevalence could not be directly linked to lead exposure. Reproductive success was monitored at 585 nests, and 3 out of 5 species had reduced nest success associated with elevated lead concentrations in soil; habitat measures did not help explain nest success. Reduced nest success may have resulted from greater nest predation resulting from neurological and behavioral effects of lead exposure. Ultimately, these lines of evidence indicate that bird health and reproduction have been negatively affected by exposure to lead-contaminated soils in the Southeast Missouri Lead Mining District.

Missouri

Summary of information on aquatic biota and their habitats in the Willamette Basin, Oregon, through 1995

Available information on aquatic biota of the Willamette Basin was reviewed and summarized to describe current and historical conditions as part of the U.S. Geological Survey's National Water-Quality Assessment Program. Biological parameters emphasized include the status, distribution, and trends of aquatic biota, particularly algae, macroinvertebrates, and fish; the condition of aquatic and riparian habitat in which these biota reside; and the response of these biota to natural and human-associated impacts, including the level, type, and effect of contaminants. Considerable data are available on aquatic biota in the Willamette Basin, although the information is highly uneven relative to taxa and spatial scope. Extensive information exists for high-profile taxa, such as salmonid fishes, but less information is available for macroinvertebrates, and relatively little data exist for algae. Additionally, some areas such as the H.J. Andrews Experimental Forest and the main stem Willamette River have been extensively studied, whereas data are limited for many other areas. The basin supports a diverse aquatic macroinvertebrate fauna. Available data indicate a relatively high diversity of taxa and a high richness of Ephemeroptera, Plecoptera, Trichoptera (EPT) taxa in the upper reaches of the basin. In the lower main stem reaches, macroinvertebrate assemblages are dominated by pollution tolerant organisms and those adapted to low dissolved oxygen levels. Most of the limited data on algae are from sampling in the main stem Willamette River. Diatoms and blue-green algae are the dominant algal forms. Approximately 61 fish species occur in the basin, although nearly half are introduced. Species richness and distribution are highly correlated with elevation, stream gradient, and water temperature. High elevation, cold water, mountain streams are characterized by a few species of salmonids, sculpins, suckers, and whitefish. Low elevation, main stem reaches of major rivers and streams are dominated by warm water species, such as bass, catfish, and several species in the pan fish group. The only species of fish listed as threatened or endangered is the Oregon chub (Oregonichthys crameri). The effect of an expanding human presence in the Willamette Basin has substantially altered aquatic and riparian habitats, and the biota that use or reside in these habitats. Construction of dams, channelization and bank stabilization of rivers, species introductions, supplementations of fisheries through aquaculture, timber harvesting, agricultural activities, and urbanization have contributed to changes in aquatic habitats and biota from historical conditions. Aquatic toxicological investigations in the basin have focused primarily on fish. These studies have addressed chlorinated pesticides, polychlorinated biphenyls (PCBs), dioxins and furans, polycyclic aromatic hydrocarbons (PAHs), and trace elements in aquatic tissue, as well as fish health assessments, skeletal abnormalities, and aquatic toxicological responses. Several pesticides exceeded U.S. Environmental Protection Agency and State water-quality criteria for the protection of aquatic life. Elevated PCB, dioxin, and furan concentrations were associated with point sources, such as pulp and paper mills. Elevated concentrations of mercury in aquatic tissue were associated with several reservoirs. Fish health assessments and skeletal abnormality studies detected high levels of abnormalities in fish from the main stem Willamette River. Few investigations have examined aquatic toxicological responses, such as enzyme induction assays, growth assays, and biomarker studies.

Oregon

The status of mussel health assessment and a path forward

Declines of freshwater mussel (order Unionida) populations worldwide are attributed to habitat degradation, pollution, and invasive species, among other factors. However, these purported causes do not fully explain the enigmatic decline and large-scale die-offs of mussels that have occurred in assumedly “healthy” streams across a wide geographic region. The roles of the microbiota and pathogens in mussel health has been understudied, and, as a result, few references exist to compare the microbiota of healthy mussels to that of stressed or dying mussels. Captive propagation and stocking programs have expanded across the globe without standard diagnostic protocols to assess health or potential diseases in hatchery-reared or wild stocks. Introduction of nonindigenous species, contaminants of emerging concern and anthropogenic climate change could adversely alter underlying variables that support mussel health such as nutrient and microbial composition, in addition to increased risk for outbreaks of opportunistic disease and emergent diseases in freshwater mussel populations. We suggest a coordinated, collaborative, and multidisciplinary effort to advance methods for assessing freshwater mussel health. We identify research and resources needed to answer central questions surrounding mussel health including identifying potential agents of disease, defining clinical signs of declining condition, refining stress-specific biomarkers for health assessment, and developing protocols specific for mussels.

Freshwater Mollusk Biology and Conservation

Biological and anthropogenic influences on macrophage aggregates in white perch Morone americana from Chesapeake Bay, USA

The response of macrophage aggregates in fish to a variety of environmental stressors has been useful as a biomarker of exposure to habitat degradation. Total volume of macrophage aggregates (MAV) was estimated in the liver and spleen of white perch Morone americana from Chesapeake Bay using stereological approaches. Hepatic and splenic MAV were compared between fish populations from the rural Choptank River (n = 122) and the highly urbanized Severn River (n = 131). Hepatic and splenic MAV increased with fish age, were greater in females from the Severn River only, and were significantly greater in fish from the more polluted Severn River (higher concentrations of polycyclic aromatic hydrocarbons, organochlorine pesticides, and brominated diphenyl ethers). Water temperature and dissolved oxygen had a significant effect on organ volumes, but not on MAV. Age and river were most influential on hepatic and splenic MAV, suggesting that increased MAV in Severn River fish resulted from chronic exposures to higher concentrations of environmental contaminants and other stressors. Hemosiderin was abundant in 97% of spleens and was inversely related to fish condition and positively related to fish age and trematode infections. Minor amounts of hemosiderin were detected in 30% of livers and positively related to concentrations of benzo [a] pyrene metabolite equivalents in the bile. This study demonstrated that hepatic and splenic MAV were useful indicators in fish from the 2 tributaries with different land use characteristics and concentrations of environmental contaminants. More data are needed from additional tributaries with a wider gradient of environmental impacts to validate our results in this species.

Maryland Virginia

White perch health relative to urbanization and habitat degradation in Chesapeake Bay tributaries. II. Hepatic and splenic macrophage aggregates

Macrophage aggregate (MA) abundance in fish is a useful general biomarker of contaminant exposures and environmental stress. Hepatic and splenic MAs were evaluated in semi-anadromous white perch Morone americana (Gmelin, 1789) from the urbanized Severn River (S) and the more rural Choptank River (C), Chesapeake Bay. Fish were collected from different sites in the annual migratory circuit in each river that corresponded to active spawning in late winter-early spring, summer regenerating, autumn developing, and winter spawning-capable phases. An age-associated progressive increase in the total volume of MAs (MAV) was evident in the liver and spleen. Mean hepatic MAV (range in seasonal means, C: 6.4-23.1 mm 3 ; S: 15.7-48.7 mm 3 ) and mean splenic MAV (C: 7.3-12.6 mm 3 ; S: 16.0-33.0 mm 3 ) differed significantly among seasons and were significantly greater in females and in Severn River fish. Age and river were the most influential factors, suggesting that increased MAV in Severn River fish resulted from chronic exposures to higher concentrations of environmental contaminants. Hepatic MAV was directly related to the relative volume of copper granules in the liver. Less influential factors on splenic MAV included fish condition, trematode infections, and granulomas, indicating possible functional differences in MAs by organ. While organ volumes were strongly linked to gonadosomatic index (GSI) and reproductive phase, the reason for seasonal differences in MAV was less clear. Water temperature, salinity, and dissolved oxygen were not significantly related to MAV, and indicators of reproductive phase (hepatosomatic index and GSI) were significant but less important in explaining variation in MAV.

Chesapeake Bay watershed

δ13C and d15N in the endangered Kemp’s ridley sea turtle Lepidochelys kempii after the Deepwater Horizon oil spill

The Deepwater Horizon explosion in April 2010 and subsequent oil spill released 3.19 × 10 6 barrels (5.07 × 10 8 L) of MC252 crude oil into important foraging areas of the endangered Kemp’s ridley sea turtle Lepidochelys kempii ( Lk ) in the northern Gulf of Mexico (GoM). We measured δ 13 C and δ 15 N in scute biopsy samples from 33 Lk nesting in Texas during 2010–-12. Of these, 27 were equipped with satellite transmitters and were tracked to traditional foraging areas in the northern GoM after the spill. Differences in δ 13 C between the oldest and newest scute layers from 2010 nesters were not significantly different, but δ 13 C in the newest layers from 2011 and 2012 nesters was significantly lower compared to 2010. δ 15 N differences were not statistically significant. Collectively, the stable isotope and tracking data indicate that the lower δ 13 C values reflect the incorporation of oil rather than changes in diet or foraging area. Discriminant analysis indicated that 51.5% of the turtles sampled had isotope signatures indicating oil exposure. Growth of the Lk population slowed in the years following the spill. The involvement of oil exposure in recent population trends is unknown, but long-term effects may not be evident for many years. Our results indicate that C isotope signatures in scutes may be useful biomarkers of sea turtle exposure to oil.

Endangered Species Research