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USGS2007

Publications of the Western Earth Surfaces Processes Team 2005

Introduction The Western Earth Surface Processes Team (WESPT) of the U.S. Geological Survey (USGS) conducts geologic mapping, earth-surface process investigations, and related topical earth science studies in the western United States. This work is focused on areas where modern geologic maps and associated earth-science data are needed to address key societal and environmental issues such as ground-water quality, landslides and other potential geologic hazards, and land-use decisions. Areas of primary emphasis in 2005 included southern California, the San Francisco Bay region, the Mojave Desert, the Colorado Plateau region of northern Arizona, and the Pacific Northwest. The team has its headquarters in Menlo Park, California, and maintains smaller field offices at several other locations in the western United States. The results of research conducted by the WESPT are released to the public as a variety of databases, maps, text reports, and abstracts, both through the internal publication system of the USGS and in diverse external publications such as scientific journals and books. This report lists publications of the WESPT released in 2005 as well as additional 2002, 2003, and 2004 publications that were not included in the previous lists (USGS Open-File Reports 03-363, 2004- 1267, 2005-1362). Most of the publications listed were authored or coauthored by WESPT staff. The list also includes some publications authored by non-USGS cooperators with the WESPT, as well as some authored by USGS staff outside the WESPT in cooperation with WESPT projects. Several of the publications listed are available on the World Wide Web; for these, URL addresses are provided. Many of these web publications are USGS Open-File reports that contain large digital databases of geologic map and related information. Information on ordering USGS publications can be found on the World Wide Web at http://www.usgs.gov/pubprod/, or by calling 1-888-ASK-USGS. The U.S. Geological Survey's web server for geologic information in the western United States is located at http://geology.wr.usgs.gov/. More information is available about the WESPT is available on-line at http://geology.wr.usgs.gov/wgmt.

Open-File Report↗

USGS1982

Some observations on the ecology and fish management of reservoirs in the United States

By 1980 there were 1,608 reservoirs (over 202 ha each) with a surface area of 4 million ha in the United States. Construction of new reservoirs has decreased in recent years because of the lack of suitable sites and the opposition of environmental interests. Reservoirs have characteristics of both lacustrine and riverine ecosystems. Reservoirs have been segmented into riverine, transitional and lacustrine zones for simulation modelling.Fish and plankton production increases rapidly after initial impoundment and then decreases and stabilizes at lower levels. Decreases in the number of fish species and in fish biomass following impoundment are caused by reduced quantity and quality of spawning and nursery habitat and decreased detrital input. Plankton populations can be followed downstream in a series of reservoirs and increases in abundance were associated with the inundation of vegetation or the introduction of nutrients.In addition to water level management, the most effective fish management programs have included introducing new fishes, developing vegetation or building structures on the reservoir bottom. Considerable progress has been made in predicting the effects of environmental parameters on fish production.

Montana, Nebraska, North Dakota, South Dakota↗

USGS1974

Selected chlorinated hydrocarbons in bottom material from streams tributary to San Francisco Bay

As part of a study of the environmental quality of San Francisco Bay, bottom material from 26 streams tributary to the Bay were analyzed for chlordane, DDD, DDE, DDT, and PCB residues. These compounds were present in essentially all streams tested. Chlordane proved to be ubiquitous, with a concentration range similar to that of the other compounds. Noteworthy was the occurrence in one stream of polychlorinated naphthalene residues. Compounds occurring in concentrations above 20 μg/kg were identified in most instances by combined gas chromatography/mass spectrometry.

California↗

USGS2005

Using fish biomarkers to monitor improvements in environmental quality

The percentage of splenic tissue occupied by macrophage aggregates and hepatosomatic index (HSI) were evaluated in rock bass Ambloplites rupestris from Burlington Harbor, Vermont. In 1992, fish collected from the inner Burlington Harbor area had a significantly greater percentage of splenic tissue occupied by macrophage aggregates and greater HSI than did fish from reference sites. These biomarkers often are correlated with exposure to various contaminants (e.g., polychlorinated biphenyls, polycyclic aromatic hydrocarbons, and some heavy metals, which were found in Burlington Harbor sediments during surveys in 1990 and 1991). Contaminants are believed to have entered Burlington Harbor through the city's main sewage treatment plant, which discharged effluent into the harbor for many years. In 1994, the city completed a significant upgrade of this treatment plant, which included an extension of the effluent pipe beyond the inner harbor area. In 1999, rock bass were again collected from Burlington Harbor as an index of whether there was any improvement in environmental quality. Our data showed a significantly lower percentage of splenic tissue occupied by macrophage aggregates and significantly lower HSI among nine age-4 rock bass in 1999 than among six age-4 rock bass in 1992. The significant changes in these biomarkers suggest decreased exposure to contaminants. Our study reinforces the value of macrophage aggregates and HSI as biomarkers of environmental contamination, and the correlation with remedial action shows their potential utility in documenting improvements in environmental conditions. ?? Copyright by the American Fisheries Society 2005.

Journal of Aquatic Animal Health↗

USGS2025

One hundred ninety-nine dead birds: Review of the scientific basis of ecological incident reporting requirements for pesticide registrants under Fifra § 6(A)(2)

The U.S. Environmental Protection Agency (EPA) regulates pesticide use in the United States. The EPA is charged by the Federal Insecticide, Fungicide, and Rodenticide Act (FIFRA) with ensuring that a pesticide will not cause unreasonable adverse effects on the environment. Incident reports (documentation of exposure and injury from pesticide applications) can serve as a reality check on the pesticide registration decisions made by the EPA scientists and risk managers. The EPA collects incident reports on human, domestic animal, and ecological injury. The FIFRA section 6(a)(2) rule requires the pesticide registrant (generally, the company or other entity that wishes to market the pesticide, hereafter registrant) to submit such data to the EPA. The EPA’s ecological incident category includes injuries to aquatic (fish), terrestrial (wildlife), other non-target organisms (ONT, e.g., invertebrates) and plants. Our document focuses on the fish and wildlife ecological incidents that are submitted by registrants. We critique the application of the FIFRA section 6(a)(2) rule that controls the quality and quantity of ecological incident data that the EPA receives from registrants. We conclude that the section 6(a)(2) provisions can impede the transfer of ecological incident data from registrant to the EPA. Consequently, detailed data for many fish and wildlife incidents may never reach the EPA, and policies and decisions may be formulated in the absence of these data.

Buffalo Environmental Law Journal↗

USGS2012

Examining the contradiction in 'sustainable urban growth': an example of groundwater sustainability

The environmental planning literature proposes a set of 'best management practices' for urban development that assumes improvement in environmental quality as a result of specific urban patterns. These best management practices, however, often do not recognise finite biophysical limits and social impacts that urban patterns alone cannot overcome. To shed light on this debate, we explore the effects of different degrees of urban clustering on groundwater levels using a coupled land-use change and groundwater-flow model. Our simulations show that specific urban forms only slow down the impact on groundwater. As population increases, the pattern in which it is accommodated ceases to matter, and widespread depletion ensues. These results are predictable, yet current planning practice tends to take growth for granted and is reluctant to envision either no-growth scenarios or the prospect of depletion. We propose to use simulations such as those presented here to aid in policy discussions that allow decision makers to question the assumption of sustainable growth and suggest alternative forms of development.

Journal of Environmental Planning and Management↗

USGS2002

Maturation and fecundity of a stock-enhanced population of striped bass in the Savannah River Estuary, U.S.A.

The striped bass Morone saxatilis population in the Savannah River (south-eastern U.S.A.) collapsed in the 1980s, and recent efforts to restore the population have resulted in increased catch-per-unit-effort (CPUE) of striped bass in the Savannah River Estuary (SRE). The abundance of eggs and larvae, however, remain well below historic levels. The primary cause of the population decline was remedied, and environmental conditions seem suitable for striped bass spawning. Regression analysis of data derived from ultrasonic imaging of 31 striped bass resulted in a statistical model that predicted ovary volume well (r2=0.95). The enumeration of oocytes from ovarian tissue samples and the prediction of ovary volume allowed fecundity to be estimated without sacrificing the fish. Oocyte maturation in Savannah River striped bass seemed to progress normally, with oocytes developing to final stages of maturity in larger fish (>750 mm LT). Additionally, fecundity estimates were comparable to a neighbouring striped bass population. The environmental cues needed to trigger development and release of striped bass oocytes into the SRE appeared to be present. If most of the striped bass females in the SRE are still young (<7 years), the ability to produce large numbers of eggs will be limited. As these young fish mature, egg production probably will increase and the density of striped bass eggs eventually will approach historic levels, provided suitable habitat and water quality are maintained. ?? 2002 The Fisheries Society of the British Isles.

Journal of Fish Biology↗

USGS2021

Evaluating management options to reduce Lake Erie algal blooms using an ensemble of watershed models

Reducing harmful algal blooms in Lake Erie, situated between the United States and Canada, requires implementing best management practices to decrease nutrient loading from upstream sources. Bi-national water quality targets have been set for total and dissolved phosphorus loads, with the ultimate goal of reaching these targets in 9-out-of-10 years. Row crop agriculture dominates the land use in the Western Lake Erie Basin thus requiring efforts to mitigate nutrient loads from agricultural systems. To determine the types and extent of agricultural management practices needed to reach the water quality goals, we used five independently developed Soil and Water Assessment Tool models to evaluate the effects of 18 management scenarios over a 10-year period on nutrient export. Guidance from a stakeholder group was provided throughout the project, and resulted in improved data, development of realistic scenarios, and expanded outreach. Subsurface placement of phosphorus fertilizers, cover crops, riparian buffers, and wetlands were among the most effective management options. But, only in one realistic scenario did a majority (3/5) of the models predict that the total phosphorus loading target would be met in 9-out-of-10 years. Further, the dissolved phosphorus loading target was predicted to meet the 9-out-of-10-year goal by only one model and only in three scenarios. In all scenarios evaluated, the 9-out-of-10-year goal was not met based on the average of model predictions. Ensemble modeling revealed general agreement about the effects of several practices although some scenarios resulted in a wide range of uncertainty. Overall, our results demonstrate that there are multiple pathways to approach the established water quality goals, but greater adoption rates of practices than those tested here will likely be needed to attain the management targets.

Michigan↗

USGS2005

The no-project alternative analysis: An early product of the Tahoe Decision Support System

We report on the development of a No-project alternative analysis (NPAA) or “business as usual” scenario with respect to a 20-year projection of 21 indicators of environmental and socioeconomic conditions in the Lake Tahoe Basin for the Tahoe Regional Planning Agency (TRPA). Our effort was inspired by earlier work that investigated the tradeoffs between an environmental and an economic objective. The NPAA study has implications for a longer term goal of building a Tahoe Decision Support System (TDSS) to assist the TRPA and other Basin agencies in assessing the outcomes of management strategies. The NPAA assumes no major deviations from current management practices or from recent environmental or societal trends and planned Environmental Improvement Program (EIP) projects. Quantitative “scenario generation” tools were constructed to simulate site-specific land uses, various population categories, and associated vehicle miles traveled. Projections of each indicator’s attainment status were made by building visual conceptual models of the relevant natural and social processes, extrapolating trends, and using available models, research, and expert opinion. We present results of the NPAA, projected indicator status, key factors affecting the indicators, indicator functionality, and knowledge gaps. One important result is that current management practices may slow the loss or degradation of environmental qualities but not halt or reverse it. Our analysis also predicts an increase in recreation and commuting into and within the basin, primarily in private vehicles. Private vehicles, which are a critical mechanism by which the Basin population affects the surrounding environment, are a key determinant of air-quality indicators, a source of particulate matter affecting Secchi depth, a source of noise, and a factor in recreational and scenic quality, largely owing to congestion. Key uncertainties in the NPAA include climate change, EIP project effectiveness, and external population, economic activity, and air pollution.

Lake Tahoe Basin↗

USGS2019

Variation in selective regimes drives intraspecific variation in life-history traits and migratory behaviour along an elevational gradient

Comparative studies, across and within taxa, have made important contributions to our understanding of the evolutionary processes that promote phenotypic diversity. Trait variation along geographic gradients provides a convenient heuristic for understanding what drives and maintains diversity. Intraspecific trait variation along latitudinal gradients is well-known, but elevational variation in the same traits is rarely documented. Trait variation along continuous elevational gradients, however, provides compelling evidence that individuals within a breeding population may experience different selective pressures. Our objectives were to quantify variation in a suite of traits along a continuous elevational gradient, evaluate whether individuals in the population experience different selective pressures along that gradient and quantify variation in migratory tendency along that gradient. We examined variation in a suite of 14 life-history, morphological and behavioural traits, including migratory tendency, of yellow-eyed juncos along a continuous 1000-m elevational gradient in the Santa Catalina Mountains of Arizona. Many traits we examined varied along the elevational gradient. Nest survival and nestling growth rates increased, while breeding season length, renesting propensity and adult survival declined, with increasing elevation. We documented the migratory phenotype of juncos (partial altitudinal migrants) and show that individual migratory tendency is higher among females than males and increases with breeding elevation. Our data support the paradigm that variation in breeding season length is a major selective pressure driving life-history variation along elevational gradients and that individuals breeding at high elevation pursue strategies that favour offspring quality over offspring quantity. Furthermore, a negative association between adult survival and breeding elevation and a positive association between nest survival and breeding elevation help explain both the downslope and reciprocal upslope seasonal migratory movements that characterize altitudinal migration in many birds. Our results demonstrate how detailed studies of intraspecific variation in suites of traits along environmental gradients can lend new insights into the evolutionary processes that promote diversification and speciation, the causes of migratory behaviour, and how animal populations will likely respond to climate change.

Journal of Animal Ecology↗

USGS2012

Why farmers adopt best management practice in the United States: A meta-analysis of the adoption literature

This meta-analysis of both published and unpublished studies assesses factors believed to influence adoption of agricultural Best Management Practices in the United States. Using an established statistical technique to summarize the adoption literature in the United States, we identified the following variables as having the largest impact on adoption: access to and quality of information, financial capacity, and being connected to agency or local networks of farmers or watershed groups. This study shows that various approaches to data collection affect the results and comparability of adoption studies. In particular, environmental awareness and farmer attitudes have been inconsistently used and measured across the literature. This meta-analysis concludes with suggestions regarding the future direction of adoption studies, along with guidelines for how data should be presented to enhance the adoption of conservation practices and guide research.

Journal of Environmental Management↗

USGS2020

Methods to quality assure, plot, summarize, interpolate, and extend groundwater-level information—Examples for the Mississippi River Valley alluvial aquifer

Large-scale computational investigations of groundwater levels are proposed to accelerate science delivery through a workflow spanning database assembly, statistics, and information synthesis and packaging. A water-availability study of the Mississippi River alluvial plain, and particularly the Mississippi River Valley alluvial aquifer (MRVA), is ongoing. Software (visGWDBmrva) has been released as part of the study that demonstrates groundwater informatics for the aquifer. Considerable water-level data collected by multiple agencies over a seven-state area exist (18,903 wells; 287,272 measurements [April 22, 2019]). Data and metadata quality assurance methods, basic statistics, hydrograph visualization, outlier identification, hypothesis testing, and time-series modeling are described. Two approaches (generalized additive models [GAMs] and support vector machines [SVMs]) are used for data interpolation and extension to monthly water-level estimates. Numerical congruence between GAM and SVM estimates will be useful to limit inclusion of monthly estimates from subsequent science activities.

Mississippi River valley↗

USGS2026

Characterization and modeling approach for planning restoration strategies in a complex basin affected by acid mine drainage

The management of acid mine drainage (AMD) impacted catchments, such as the Odiel River basin, in southwestern Spain, prioritizes reclamation to meet water resources needs. Assessing water composition across its watercourses is needed to identify major AMD contributors and potentially guide remediation efforts. An equilibrium-based mixing model was developed to simulate AMD pollutant load reductions and estimate the impact of selective restorations on water quality in the Odiel River, particularly at the planned Alcolea Reservoir near its outlet. Sampling under varying flow conditions (average vs. high flow) showed a reduction in acidity transport (from 54.0 to 42.5 ton/day), attributed to greater neutralization effects during high flows. Over 90 % of metal-fluxes originate alone from the Riotinto (73.6 %), Tharsis (14.5 %), and San Telmo (5.00 %) mining districts, among many other mines. While geochemical model estimates fit well with observed data (R 2 = 0.99), some deviations in non-conservative constituents (i.e. pH, Fe and Al) were observed (R 2 = 0.73–0.99), likely due to uncertainties in solubility constants and redox/Fe speciation. After evaluating model reliability, two reduction scenarios (50 % and 100 %) were applied to the three primary sources. Full removal of contamination could subtantially improve impounded reservoir water quality, with pH values of 4.93 and 7.64, and a net acidity between 8.75 and 4.63 mg/L eq. CaCO 3 in both average and high flows, respectively. Such differences may be related to flow regime effects on water quality. However, a 50 % reduction is insufficient to meet drinking or irrigation standards, highlighting the need for full and appropriate reclamation. The model offers a management tool for decision-making in the restoration of the Odiel River basin and could be transferable to similar AMD-affected basins worldwide.

Odiel River basin, southwestern Spain↗

USGS2011

Factors affecting stream nutrient loads: A synthesis of regional SPARROW model results for the continental United States

We compared the results of 12 recently calibrated regional SPARROW (SPAtially Referenced Regressions On Watershed attributes) models covering most of the continental United States to evaluate the consistency and regional differences in factors affecting stream nutrient loads. The models – 6 for total nitrogen and 6 for total phosphorus – all provide similar levels of prediction accuracy, but those for major river basins in the eastern half of the country were somewhat more accurate. The models simulate long‐term mean annual stream nutrient loads as a function of a wide range of known sources and climatic (precipitation, temperature), landscape (e.g., soils, geology), and aquatic factors affecting nutrient fate and transport. The results confirm the dominant effects of urban and agricultural sources on stream nutrient loads nationally and regionally, but reveal considerable spatial variability in the specific types of sources that control water quality. These include regional differences in the relative importance of different types of urban (municipal and industrial point vs. diffuse urban runoff) and agriculture (crop cultivation vs. animal waste) sources, as well as the effects of atmospheric deposition, mining, and background (e.g., soil phosphorus) sources on stream nutrients. Overall, we found that the SPARROW model results provide a consistent set of information for identifying the major sources and environmental factors affecting nutrient fate and transport in United States watersheds at regional and subregional scales.

Journal of the American Water Resources Associatio↗

USGS2002

The US Geological Survey's national coal resource assessment: The results

The US Geological Survey and the State geological surveys of many coal-bearing States recently completed a new assessment of the top producing coal beds and coal zones in five major producing coal regions—the Appalachian Basin, Gulf Coast, Illinois Basin, Colorado Plateau, and Northern Rocky Mountains and Great Plains. The assessments, which focused on both coal quality and quantity, utilized geographic information system technology and large databases. Over 1,600,000 million short tons of coal remain in over 60 coal beds and coal zones that were assessed. Given current economic, environmental, and technological restrictions, the majority of US coal production will occur in that portion of the assessed coal resource that is lowest in sulfur content. These resources are concentrated in parts of the central Appalachian Basin, Colorado Plateau, and the Northern Rocky Mountains.

International Journal of Coal Geology↗

USGS1999

The adrenocorical stress-response of Black-legged Kittiwake chicks in relation to dietary restrictions

In this study we examined hormonal responses of Black-legged Kittiwake ( Rissatridactyla ) chicks to experimental variations in energy content and nutritional quality (low or high lipid to protein ratio, LPR) of their food. Starting at the age of 10 days, chicks were fed either high or low LPR fish at 30, 50, 70 and 100% of ad libitum energy intake. After 20 days of treatment, chicks were exposed to a standardized acute handling and restraint stress protocol, where a baseline sample was taken immediately after taking a chick from the nest, and three additional blood samples were taken at intervals up to 50 min. Testosterone and corticosterone titres in plasma were measured via radioimmunoassay. We found that baseline testosterone levels were not significantly affected by the experimental treatments. Food-restricted chicks had elevated baseline and acute stress-induced levels of corticosterone compared to chicks fed ad libitum. An elevation of circulating levels of corticosterone in energetically stressed individuals was further magnified by low nutritional quality of food. Baseline and acute stress-induced corticosterone levels of chicks were negatively correlated with their fat reserves. We conclude that the physiological condition of Black-legged Kittiwake chicks can be assessed reliably by measuring circulating levels of corticosterone. We discuss short- and long-term effects of elevated corticosterone secretion in food-stressed nest-bound chicks.

Journal of Comparative Physiology B: Biochemical, ↗

USGS2007

An analysis of urban development and its environmental impact on the Tampa Bay watershed

Urbanization has transformed natural landscapes into anthropogenic impervious surfaces. Urban land use has become a major driving force for land cover and land use change in the Tampa Bay watershed of west-central Florida. This study investigates urban land use change and its impact on the watershed. The spatial and temporal changes, as well as the development density of urban land use are determined by analyzing the impervious surface distribution using Landsat satellite imagery. Population distribution and density are extracted from the 2000 census data. Non-point source pollution parameters used for measuring water quality are analyzed for the sub-drainage basins of Hillsborough County. The relationships between 2002 urban land use, population distribution and their environmental influences are explored using regression analysis against various non-point source pollutant loadings in these sub-drainage basins. The results suggest that strong associations existed between most pollutant loadings and the extent of impervious surface within each sub-drainage basin in 2002. Population density also exhibits apparent correlations with loading rates of several pollutants. Spatial variations of selected non-point source pollutant loadings are also assessed.

Journal of Environmental Management↗

USGS2016

Groundwater

Introduction Groundwater represents the terrestrial subsurface component of the hydrologic cycle. As such, groundwater is generally in motion, moving from elevated areas of recharge to lower areas of discharge. Groundwater usually moves in accordance with Darcy’s law (Dalmont, Paris: Les Fontaines Publiques de la Ville de Dijon, 1856). Groundwater residence times can be under a day in small upland catchments to over a million years in subcontinental-sized desert basins. The broadest definition of groundwater includes water in the unsaturated zone, considered briefly here. Water chemically bound to minerals, as in gypsum (CaSO 4 • 2H 2 O) or hydrated clays, cannot flow in response to gradients in total hydraulic head (pressure head plus elevation head); such water is thus usually excluded from consideration as groundwater. In 1940, M. King Hubbert showed Darcy’s law to be a special case of thermodynamically based potential field equations governing fluid motion, thereby establishing groundwater hydraulics as a rigorous engineering science ( Journal of Geology 48, pp. 785–944). The development of computer-enabled numerical methods for solving the field equations with real-world approximating geometries and boundary conditions in the mid-1960s ushered in the era of digital groundwater modeling. An estimated 30 percent of global fresh water is groundwater, compared to 0.3 percent that is surface water, 0.04 percent atmospheric water, and 70 percent that exists as ice, including permafrost ( Shiklomanov and Rodda 2004 , cited under Groundwater Occurrence ). Groundwater thus constitutes the vast majority—over 98 percent—of the unfrozen fresh-water resources of the planet, excluding surface-water reservoirs. Environmental dimensions of groundwater are equally large, receiving attention on multiple disciplinary fronts. Riparian, streambed, and spring-pool habitats can be sensitively dependent on the amount and quality of groundwater inputs that modulate temperature and solutes, including nutrients and dissolved oxygen. Groundwater withdrawals can negatively impact riparian habitats by depriving ecosystems of adequate fresh water and fragmenting communities when streams go dry. Biochemical reactions in shallow groundwater can remove anthropogenically elevated nitrogen compounds and reduce—but only to a point—the greening of waterways and shorelines with periphyton and harmful algal blooms. Groundwater extraction for beneficial use is increasingly limited by water-quality constraints imposed by naturally occurring and introduced substances. Overdrafting can cause land-surface subsidence, damaging buildings and roads and disrupting canals, sewers, and other gravity-flow conveyances. Increases in groundwater levels can cause soil salinization in dry regions and erosive sapping and flooding in wet regions. Coastal saltwater intrusion, groundwater flooding, salinization associated with groundwater-irrigated agriculture, induced seismicity from injected wastes, and the detrimental impacts of groundwater depletion are among the major environmental challenges of our time.

Book chapter↗