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At least 289 records · Page 16Linked to original sources

How biological soil crusts became recognized as a functional unit: a selective history

It is surprising that despite the world-wide distribution and general importance of biological soil crusts (biocrusts), scientific recognition and functional analysis of these communities is a relatively young field of science. In this chapter, we sketch the historical lines that led to the recognition of biocrusts as a community with important ecosystem functions. The idea of biocrusts as a functional ecological community has come from two main scientific branches: botany and soil science. For centuries, botanists have long recognized that multiple organisms colonize the soil surface in the open and often dry areas occurring between vascular plants. Much later, after the initial taxonomic and phyto-sociological descriptions were made, soil scientists and agronomists observed that these surface organisms interacted with soils in ways that changed the soil structure. In the 1970’s, research on these communities as ecological units that played an important functional role in drylands began in earnest, and these studies have continued to this day. Here, we trace the history of these studies from the distant past until 1990, when biocrusts became well-known to scientists and the public.

Book chapter

Geology of caves

A cave is a natural opening in the ground extending beyond the zone of light and large enough to permit the entry of man. Occurring in a wide variety of rock types and caused by widely differing geological processes, caves range in size from single small rooms to intercorinecting passages many miles long. The scientific study of caves is called speleology (from the Greek words spelaion for cave and logos for study). It is a composite science based on geology, hydrology, biology, and archaeology, and thus holds special interest for earth scientists of the U.S. Geological Survey.

General Interest Publication

Hydrologic data from urban watersheds in the Tampa Bay area, Florida

Hydrologic data are being collected in 10 urbanized watersheds located in the Tampa Bay area, Florida. The gaged watersheds have impervious areas that range from 19 percent for a residential watershed in north Tampa to nearly 100 percent for a downtown Tampa watershed. Land-use types, including roads, residential, commercial, industrial, institutional, recreational , and open space, have been determined for each watershed. Rainfall and storm runoff data collected since 1971 for one site and since 1975 for six other sites through September 1976, have been processed. These data are recorded at 5-minute intervals and are stored in the U. S. Geological Survey WATSTORE unit values file. Daily rainfall at 12 sites and daily pan evaporation at one site have been stored in the WATSTORE daily values file. Chemical and biological analyses of storm runoff for six sites, base flow for seven sites, and analyses of bottom material for seven sites are also stored in the WATSTORE water-quality files. Rainfall and storm runoff for selected storms, daily rainfall, and daily pan-evaporation data are summarized in this report. Water-quality analyses of all water-quality samples also are listed. (Woodard-USGS).

Florida

Seasonal cues of Arctic grayling movement in a small Arctic stream: the importance of surface water connectivity

In Arctic ecosystems, freshwater fish migrate seasonally between productive shallow water habitats that freeze in winter and deep overwinter refuge in rivers and lakes. How these movements relate to seasonal hydrology is not well understood. We used passive integrated transponder tags and stream wide antennae to track 1035 Arctic grayling in Crea Creek, a seasonally flowing beaded stream on the Arctic Coastal Plain, Alaska. Migration of juvenile and adult fish into Crea Creek peaked in June immediately after ice break-up in the stream. Fish that entered the stream during periods of high flow and cold stream temperature traveled farther upstream than those entering during periods of lower flow and warmer temperature. We used generalized linear models to relate migration of adult and juvenile fish out of Crea Creek to hydrology. Most adults migrated in late June – early July, and there was best support (Akaike weight = 0.46; w i ) for a model indicating that the rate of migration increased with decreasing discharge. Juvenile migration occurred in two peaks; the early peak consisted of larger juveniles and coincided with adult migration, while the later peak occurred shortly before freeze-up in September and included smaller juveniles. A model that included discharge, minimum stream temperature, year, season, and mean size of potential migrants was most strongly supported ( w i = 0.86). Juvenile migration rate increased sharply as daily minimum stream temperature decreased, suggesting fish respond to impending freeze-up. We found fish movements to be intimately tied to the strong seasonality of discharge and temperature, and demonstrate the importance of small stream connectivity for migratory Arctic grayling during the entire open-water period. The ongoing and anticipated effects of climate change and petroleum development on Arctic hydrology (e.g. reduced stream connectivity, earlier peak flows, increased evapotranspiration) have important implications for Arctic freshwater ecosystems.

Alaska

Salton Sea Ecosystem Monitoring Project

The Salton Sea is critically important for wintering and breeding waterbirds, but faces an uncertain future due to water delivery reductions imposed by the Interstate and Federal Quantification Settlement Agreement of 2003. The current preferred alternative for wetland restoration at the Salton Sea is saline habitat impoundments created to mitigate the anticipated loss of wetland habitat. In 2006, a 50-hectare experimental complex that consisted of four inter-connected, shallow water saline habitat ponds (SHP) was constructed at the southeastern shoreline of the Salton Sea and flooded with blended waters from the Alamo River and Salton Sea. The present study evaluated ecological risks and benefits of the SHP concept prior to widespread restoration actions. This study was designed to evaluate (1) baseline chemical, nutrient, and contaminant measures from physical and biological constituents, (2) aquatic invertebrate community structure and colonization patterns, and (3) productivity of and contaminant risks to nesting waterbirds at the SHP. These factors were evaluated and compared with those of nearby waterbird habitat, that is, reference sites.

Open-File Report

Significance of headwater streams and perennial springs in ecological monitoring in Shenandoah National Park

Shenandoah National Park has been monitoring water chemistry and benthic macroinvertebrates in stream ecosystems since 1979. These monitoring efforts were designed to assess the status and trends in stream condition associated with atmospheric deposition (acid rain) and changes in forest health due to gypsy moth infestations. The primary objective of the present research was to determine whether the current long-term macroinvertebrate and water-quality monitoring program in Shenandoah National Park was failing to capture important information on the status and trends in stream condition by not sufficiently representing smaller, headwater streams. The current benthic-macroinvertebrate and water-chemistry sampling designs do not include routine collection of data from streams with contributing watershed areas smaller than 100 hectares, even though these small streams represent the overwhelming proportion of total stream length in the park. In this study, we sampled headwater sites, including headwater stream reaches (contributing watershed area approximately 100 hectares (ha) and perennial springs, in the park for aquatic macroinvertebrates and water chemistry and compared the results with current and historical data collected at long-term ecological monitoring (LTEM) sites on larger streams routinely sampled as part of ongoing monitoring efforts. The larger purpose of the study was to inform ongoing efforts by park managers to evaluate the effectiveness and efficiency of the current aquatic monitoring program in light of other potential stressors (for example, climate change) and limited resources. Our results revealed several important findings that could influence management decisions regarding long-term monitoring of park streams. First, we found that biological indicators of stream condition at headwater sites and perennial springs generally were more indicative of lower habitat quality and were more spatially variable than those observed at sites on routinely monitored larger streams. We hypothesized that poorer stream condition observed in smaller streams was due to stream drying that occurs more frequently in headwater areas. We also found that biological and water-chemistry measures responded differently to landscape drivers. Variation in most biological endpoints was driven primarily by stream size and was only secondarily associated with bedrock geology. In contrast, water chemistry showed essentially the opposite pattern, with underlying geology explaining much of the variation and stream size being of secondary importance. Therefore, expanding the LTEM program to include headwater areas would yield substantially different biological information, whereas broad inferences regarding spatial patterns in water chemistry would probably not change. Although significant differences in community composition were observed among streams of different sizes, no taxa were unique to headwater sites. All taxa collected at the 45 headwater sites also had been collected at one or more LTEM sites during one or more years. This observation indicates that headwater sites in the park may be structured by biotic nestedness; consequently, focusing management efforts on preserving the species pool at the larger LTEM sites would likely result in the protection of most taxa parkwide. Finally, linkages (correlations) between water chemistry and biological measures of stream condition were signficantly stronger when assessed at the LTEM sites than when assessed at the springs or headwater sites, indicating that conditions at downstream sites may be better indicators of water-quality trends.

Virginia

Skagit River coho salmon life history model—Users’ guide

Natural resource management is conducted in the context of multiple anthropogenic stressors and is further challenged owing to changing climate. Experiments to determine the effects of climate change on complex ecological systems are nearly impossible. However, using a simulation model to synthesize current understanding of key ecological processes through the life cycle of a fish population can provide a platform for exploring potential effects of and management responses to changing conditions. Potential climate-change scenarios can be imposed, responses can be observed, and the effectiveness of potential actions can be evaluated. This approach is limited owing to future conditions likely deviating in range and timing from conditions used to create the model so that the model is expected to become obsolete. In the meantime, however, the modeling process explicitly states assumptions, clarifies information gaps, and provides a means to better understand which relationships are robust and which are vulnerable to changing climate by observing whether and why model output diverges from actual observations through time. The purpose of the model described herein is to provide such a decision-support tool regarding coho ( Oncorhynchus kisutch ) salmon for the Sauk-Suiattle Indian Tribe of Washington State. The Skagit coho salmon model is implemented in a system dynamics format and has three primary stocks—(1) predicted smolts, (2) realized smolts, and (3) escapement. “Predicted smolts” are the number of smolts expected based on the number of spawners in any year and the Ricker production curve. Pink salmon ( Oncorhynchus gorbuscha ) return to the Skagit River in odd years, and when they overlap with juvenile rearing coho salmon, coho smolt production is substantially higher than in non-pink years. Therefore, the model uses alternative Ricker equations to predict smolts depending on whether their juvenile year was a pink or non-pink year. The stock “realized smolts” is calculated based on the expected effect of streamflow conditions to alter the productivity predicted by the Ricker curve. Adverse conditions include scouring flow events that occur when redds are present; high-flow events during winter on juveniles, which can cause fish displacement and adverse water turbidity; and extremely low flows in summer. The stock “escapement” represents the fish remaining after accounting for ocean mortality and harvest. Ocean mortality has been linked with indices of ocean conditions, which are related to ocean biological productivity. Ocean survival also may have a density-dependent component such that lower survival is associated with higher numbers of smolts. The model allows the user to change certain model parameters and inputs, and choose among alternative predictors for certain modeled relations.

Washington

Preliminary geological report on the Salt Plains reservoir site, Oklahoma

Following a request from the U.S. Bureau of Biological Survey, the writer was assigned by the Director of the U.S. Geological Survey to make a preliminary geological investigation of the Salt Plains area in Oklahoma. He spent the period from January 13 to January 22, 1934, in the field making this study. (available as photostat copy only)

Open-File Report

Effects of acid mine drainage on fish and macroinvertebrates of the Tioga River, Pennsylvania and New York

Acid water from abandoned coal mines in the vicinity of Morris Run and Blossburg, Pa., severely alter the aquatic environment of the Tioga River. From Morris Run to Crooked Creek, a reach of 19 miles, the river bed is influenced by a smothering blanket of heavy metal precipitates and highly acidic water. Biologically, this reach of the river is devoid of fishlife and nearly devoid of benthic macroinvertebrates. Downstream from Crooked Creek the water quality and biota are slowly restored. At Presho, N.Y., the river again supports an abundant and diversified population of fish and bottom-dwelling organisms.

New York, Pennsylvania

Sample mine-site permit application (hydrologic assessment)

Hydrologic data are presented that may be useful in the permitapplication procedure required under current Office of Surface Mining regulations. The material is presented in a format which may serve as a guide for subsequent permit applications. Data on the quality and quantity of surface water and ground water for the mine plan, adjacent, and general areas are presented. The data are presented in three general categories: measured and estimated current conditions, estimated annual variations, and predicted effects of mining and reclamation. Current surface-water, ground-water, and biological conditions are the easiest to define. Seasonal variations in surface-water flow can be estimated with some confidence, but seasonal variations in surface-water quality, biological quality, and ground-water levels and quality are difficult to estimate with the insufficient field data available. The effects of mining and reclamation cannot be predicted through the use of the scant data collected and current predictive tools.

Open-File Report

Movements of Yellowstone grizzly bears

Ninety-seven grizzly bears Ursus arctos horribilis were radio-located 6299 times during 1975–1987. Annual range sizes differed by sex, age, reproductive status and amount of precipitation. Females exhibited greater fidelity to seasonal and annual ranges than males. Weaned female offspring generally remained in the vicinity of the maternal range, while weaned males often made substantial movements to unexplored country. Average total home range size was 884 km 2 for females and 3757 km 2 for males. Males consistently exhibited greater indices of movement and range sizes than females. All cohorts had larger mean ranges during this study than during the period 1959–1969 when the population had access to open garbage dumps. Movements and elevational distribution of all cohorts were related to availability of whitebark pine Pinus albicaulis seeds. We hypothesized that females with cubs-of-the-year and yearlings were displaced from most productive habitats during seasons and years of limited food availability.

Idaho;Montana;Wyoming

Field Evaluations of Sampling Methods for Long-Term Monitoring of Upland Ecosystems on the Colorado Plateau

To inform planning for long-term ecological monitoring, we sampled vegetation and soil-surface attributes across a range of terrestrial ecosystems (physiognomic types) in seven National Park Service units on the Colorado Plateau. Primary objectives were (1) to evaluate a suite of sampling methods according to measures of repeatability, efficiency, and impacts on plot conditions; and (2) to characterize within- and among-plot variability in monitoring measures. This work was designed to support NPS staff in selecting the combination of methods that best meets their monitoring objectives and resource constraints. We found no differences among cover-estimation techniques in terms of repeatability between observers (measurement precision). Estimates for total live understory canopy cover, cover of individual species, and cover of soil-surface features were highly repeatable between observers for 10-m2 quadrats, 1-m2 quadrats, and line-point intercept sampling methods. Estimates of shrub and tree density in 10-m2 quadrats also were repeatable between observers, although sample sizes for were small for many species. At 10 of 11 ecological sites, we found that sampling with 10-m2 quadrats was the most efficient cover-estimation technique with respect to within-plot variability in cover estimates and numbers of subsamples required to estimate plot-level cover with 20 percent precision. According to these same measures, sampling with 1-m2 quadrats was the least efficient cover-estimation technique at eight of 11 ecological sites. The line-point technique was most efficient at eight of 11 ecological sites in terms of the amount of time required to estimate total plot-level cover with 20 percent precision - largely because 10-m2 quadrats were more time consuming and 1-m2 quadrats had greater within-plot variability relative to line-point sampling. However, there was no statistical difference among methods with respect to median subsampling times for 20 percent precision. There also were no differences among methods with respect to mean and median measures of among-plot variability in total live understory canopy cover. But among-plot variability was least for the line-point technique at seven of 11 ecological sites. Sampling activities had greatest impacts on plot conditions at macroplots where there was a high degree of cover by biological and physical soil crusts. Of all sampling procedures, 10-m2 quadrat sampling, line-point sampling, and gap-intercept sampling had the most impacts on soil conditions due to trampling of soil crusts by the field team.

Open-File Report

Airborne digital-image data for monitoring the Colorado River corridor below Glen Canyon Dam, Arizona, 2009 - Image-mosaic production and comparison with 2002 and 2005 image mosaics

Airborne digital-image data were collected for the Arizona part of the Colorado River ecosystem below Glen Canyon Dam in 2009. These four-band image data are similar in wavelength band (blue, green, red, and near infrared) and spatial resolution (20 centimeters) to image collections of the river corridor in 2002 and 2005. These periodic image collections are used by the Grand Canyon Monitoring and Research Center (GCMRC) of the U.S. Geological Survey to monitor the effects of Glen Canyon Dam operations on the downstream ecosystem. The 2009 collection used the latest model of the Leica ADS40 airborne digital sensor (the SH52), which uses a single optic for all four bands and collects and stores band radiance in 12-bits, unlike the image sensors that GCMRC used in 2002 and 2005. This study examined the performance of the SH52 sensor, on the basis of the collected image data, and determined that the SH52 sensor provided superior data relative to the previously employed sensors (that is, an early ADS40 model and Zeiss Imaging's Digital Mapping Camera) in terms of band-image registration, dynamic range, saturation, linearity to ground reflectance, and noise level. The 2009 image data were provided as orthorectified segments of each flightline to constrain the size of the image files; each river segment was covered by 5 to 6 overlapping, linear flightlines. Most flightline images for each river segment had some surface-smear defects and some river segments had cloud shadows, but these two conditions did not generally coincide in the majority of the overlapping flightlines for a particular river segment. Therefore, the final image mosaic for the 450-kilometer (km)-long river corridor required careful selection and editing of numerous flightline segments (a total of 513 segments, each 3.2 km long) to minimize surface defects and cloud shadows. The final image mosaic has a total of only 3 km of surface defects. The final image mosaic for the western end of the corridor has areas of cloud shadow because of persistent inclement weather during data collection. This report presents visual comparisons of the 2002, 2005, and 2009 digital-image mosaics for various physical, biological, and cultural resources within the Colorado River ecosystem. All of the comparisons show the superior quality of the 2009 image data. In fact, the 2009 four-band image mosaic is perhaps the best image dataset that exists for the entire Arizona part of the Colorado River.

Arizona

Water-quality data for landfills, Hillsborough County, Florida, January 1974-October 1977

Periodic water-quality data were collected at four landfills in Hillsborough County from January 1974 through October 1977. Water samples were analyzed for nitrogen and phosphorous species, cations, trace metals, chloride, specific conductance, chemical oxygen demand, biological oxygen demand, and coliforms. Select ground-water samples were analyzed for herbicide and pesticide. Results of chemical and bacteriological analysis form four landfills are presented as basic data. Geologic logs and well descriptions are presented for wells drilled at the landfills after January 1974.

Florida

Gulf of Mexico integrated science - Tampa Bay study - Characterization of tidal wetlands

Tidal wetlands in Tampa Bay, Florida, consist of mangrove forests and salt marshes. Wetlands buffer storm surges, provide fish and wildlife habitat, and enhance water quality through the removal of water-borne nutrients and contaminants. Substantial areas of both mangroves and salt marshes have been lost to agricultural, residential, and industrial development in this urban estuary. Wetlands researchers are characterizing the biological components of tidal wetlands and examining the physical factors such as salinity, tidal flushing, and sediment deposition that control the composition of tidal wetland habitats. Wetlands restoration is a priority of resource managers in Tampa Bay. Baseline studies such as these are needed for successful restoration planning and evaluation.

Florida

Effects of spatial orientation of multiple plate artificial substrates on invertebrate colonization

Jumbo multiple plate samplers were suspended in a river at 0.3 and 1 m depth in one of three orientations: interplate spaces closed to downwelling light and open to flow, open to light and flow, or open to light and closed to flow. Mean numbers of colonizing taxa and individuals were not significantly different among orientations after eight weeks of submergence. All variables tested decreased significantly with depth. Mean number of taxa, number of individuals (1 m only), and insect diversity decreased between samplings at four and eight weeks for samplers that were closed to light and open to flow. All orientations, depths, and durations had one‐half to two‐thirds of the total taxa. Colonization was affected by location in the river and position on sampler suspension equipment. The results indicate lack of orientation effects on colonization or high variability that obscured such effects. The sampler suspension equipment possibly increased among‐sampler variability by forming artificial snag habitats, and interplate light and flow conditions at different orientations may not have been sufficiently distinct to elicit different biological responses. Individual samplers provided diverse microhabitats regardless of orientation, but it would be prudent to include orientation among the variables considered in use of multiple plate samplers.

Journal of the American Water Resources Associatio

A paleoecologic reconstruction of the history of Featherbed Bank, Biscayne National Park, Biscayne Bay, Florida

Using multiple-proxy biological indicators, a paleoecological history of the past 550 years of Featherbed Bank, Biscayne Bay, has been reconstructed from a short (2.26 m) sediment core. Paleoecological changes in ostracode, mollusc, and foraminifer assemblages show that core SEI297-FB-1 can be divided into three distinctly different zones, which together provide evidence for distinct changes in historical environmental conditions at Featherbed Bank. Assemblages from fossil biotic communities within zone 1, representing approximately 1440 to 1550 AD, are characterized by open-marine biota with relatively limited numbers of epiphytic biota. Molluscan faunal indicators suggest the sediment was capable of supporting infaunal organisms and that faunal richness was relatively limited during this time period. A change in the biotic community occurred around 1550 AD and continued until the late 1800's distinguishing zone 2. Fossil biotic indicators from zone 2 show a strong dominance of epiphytic organisms within all of the biotic communities examined. Foraminifers, molluscs, and ostracodes capable of subsisting in salinities slightly lower than normal marine begin to flourish in this time period, and there is a marked decline in infaunal molluscs. Zone 2 assemblages are replaced around 1900 AD by increased numbers of organisms that typify open-marine conditions and a return to decreased epiphytic assemblages, similar to zone 1. Zone 3 assemblages, however, show some strong dissimilarities from zone 1, including limited infaunal molluscs, increased abundances of the ostracode Malzella floridana, and a significant increase in molluscan faunal richness.

Florida