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At least 289 records · Page 16Linked to original sources
USGS2023

Climate vulnerability for a desert fish: Integrating hydrologic exposures, adaptive capacity, and growth potential

Climate vulnerability can be evaluated by multiple organismal responses. We developed a climate vulnerability framework focused on growth potential of redband trout (Oncorhynchus mykiss newberri). We employed a bioenergetics model to evaluate spatial variability in growth potential in relation to constraints on body size imposed by stream flow, physiological responses linked to variable thermal regimes, and variation in physiological adaptive capacity inferred from field respirometry. Results indicate that maximum size (g) of redband trout increases with stream discharge. Growth potential is strongly linked to body size, with smaller individuals performing better relative to larger fish in cooler thermal regimes. Annual patterns of growth varied among sites and were related to body size and physiological adaptive capacity. Putatively cold-adapted fish were more likely to exhibit bimodal growth with peaks in spring and autumn, whereas warm-adapted fish exhibit a summer peak in growth potential. These findings offer insights into how climate vulnerability of stream-living fish can be conditioned on both stream flow and thermal regimes, and the potential for physiological adaptive capacity to influence vulnerability.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2023

Persistence of native riverine fishes downstream from two hydropower dams with contrasting operations

Identifying hydropower dam operations that lessen detrimental effects on downstream fauna could inform conservation strategies for native fishes. We compared occurrence of native fishes in 20 shoal habitats downstream from two differently operated hydropower dams in the Coosa River system, Georgia, USA. Species richness averaged 7 and 11, respectively, in surveys downstream from (1) a hydropeaking dam and (2) a dam with a re-regulation structure that stabilized downstream flows. In contrast, surveys in two nearby reference communities averaged 19 and 24 species. Species persisting downstream from the dams tended toward water-column orientation, larger body size, longer life-span, and greater prevalence in tributary stream collections, compared with missing or rarely captured species. We observed no evidence of recovery toward reference conditions when operations were paused for 28 months at the hydropeaking dam. Our observations suggest that (1) strongly contrasting dam operations can result in similar alterations to native fish assemblages, potentially reflecting effects of thermal alteration by hypolimnetic water release, and (2) periodic dispersal from tributary streams may enhance fish persistence in flow-altered rivers.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2023

Characteristics of a sea louse (Caligus clemensi) epizootic in wild Pacific herring (Clupea pallasii)

We characterized a natural sea louse epizootic of Caligus clemensi and the effects of parasitism on Pacific herring Clupea pallasii in Port Angeles Harbor, WA, USA. Infestation prevalence on newly metamorphosed age 0 Pacific herring reached 100% prevalence by mid-August. At this time, the mean louse intensity was 4.6 lice/fish, and a positive correlation occurred between louse intensity and herring body length. The epizootic then waned, with infestation prevalence decreasing to less than 25% and the mean parasite intensity falling below 1 louse. While skin injuries were not detected, motile lice preferentially aggregated around head and anterior dorsal areas. However, louse tropism became evenly distributed over the body as the parasite intensity increased. Louse-induced mortality in herring was negligible in controlled experiments. These results indicate that Caligus clemensi epizootics reach high prevalence, but also fade from mid-summer to early fall. Due to the predominant presence of motile copepod stages, we suggest that the epizootic fades because lice complete their life cycle and dislodge from the host; however, multiple explanations for epidemic fading are possible.

Washington↗
USGS2024

Quantifying uncertainty when extrapolating the relationship between snorkel counts and mark-recapture estimates of juvenile salmonids

Snorkel surveys are frequently used to monitor stream-dwelling fish. Inferring local abundance from snorkel surveys is complicated by two primary factors: variable fish detection probabilities and the relative abundance of fish in habitat types below the recommended minimum depth for snorkeling. We examine these factors across three salmonid species ( Oncorhynchus spp . ), 4 years, and 113 location-years in Oregon coastal streams. We calibrate snorkel counts to mark-recapture estimates and develop mathematically explicit expressions that convert a new snorkel count into a probability density of abundance for streams containing mixed habitat types that were and were not snorkeled. Snorkelers detected 63%, 47%, and 39% of juvenile coho salmon ( Oncorhynchus kitsutch ), steelhead trout ( Oncorhynchus mykiss ), and cutthroat trout ( Oncorhynchus clarkii clarkia ) estimated by mark-recapture, respectively, but uncertainty within and among sampling units was high. Further, analytics developed here can be used to infer abundance and uncertainty for habitat types that were not snorkeled. Our quantification of uncertainty arising from using snorkel counts as a proxy for abundance will help managers balance biological risks with available resources.

Oregon↗
USGS2024

Trophic ecology of juvenile lean and siscowet lake charr (Salvelinus namaycush) in Lake Superior: Assessing for potential competition

We investigated the spatial overlap, diet, isotopic niche, and growth of juvenile lean and siscowet lake charr ( Salvelinus namaycush ) in Lake Superior to address concerns of potential competition with implications to the study of resource polymorphism. Catch data revealed the greatest levels of sympatry in waters from 40 to 60 m. Juvenile lean and siscowet diet changed ontogenetically with Mysis being the dominant prey item for the smallest lake charr but differentiating with onset of piscivory. As ecotypes increased in size, lean diets became dominated by pelagic prey, whereas siscowets had equal proportions of benthic and pelagic prey. Isotopic niche overlap declined between ecotypes coincident with siscowet lake charr shifting to deeper habitats around 400 mm. Lean and siscowet exhibited different growth trajectories. However, length at age-4 declined in parallel for both ecotypes with no trend in condition suggesting that lake charr growth is sensitive to prey biomass and unlikely related to competition. Our findings indicate minimal evidence of competition and support the concept that multiple sympatric ecotypes of lake charr in Lake Superior are maintained by resource polymorphism.

Lake Superior↗
USGS2024

Incorporating life history diversity in an integrated population model to inform viability analysis

Life history diversity can significantly affect population dynamics and effects of management actions. For instance, variation in individual responses to environmental variability can reduce extirpation risk to populations, as the portfolio effect dampens temporal variability in abundance. Moreover, differences in habitat use may cause individuals to respond differently to habitat management and climate variability. To explore the role of life history diversity in population trajectories, population models need to incorporate within-population variation. Integrated population modeling (IPM) is a population modeling approach that offers several advantages for sharing information and propagating uncertainty across datasets. In this study, we developed an IPM for an endangered population of Chinook salmon ( Oncorhynchus tshawytscha ) in the Wenatchee River, Washington, USA, that accounts for diversity in juvenile life histories, spawning location, and return age. Our analysis revealed that diversity in the age of juvenile emigration from natal streams had a portfolio effect, resulting in a 20% reduction in year-to-year variability in adult abundance in population projections. Our population viability analysis suggests that management interventions may be necessary to meet recovery goals, and our model should be useful for simulating the outcomes of proposed actions.

Washington↗
USGS2024

Dams facilitate predation during Atlantic salmon (Salmo salar) smolt migration

Diadromous fish populations have incurred precipitous declines across the globe. Among many stressors, these species are threatened by anthropogenic barriers that impede movement, alter riverine habitat, and augment predator communities. In this study, we used acoustic transmitters ( n = 220) with predation and temperature sensors to characterize Atlantic salmon ( Salmo salar ) smolt predation risk in the Penobscot River, Maine, USA. Across two seasons, we documented 79 predation events through a 170 km migratory pathway, which included three hydropower projects and a large estuary. We detected tagged smolts that were predated by fish ( n = 42), marine mammals ( n = 28), and birds ( n = 9). Using a multistate mark-recapture framework, we estimated that 46% of smolts were predated during downstream migration, which accounted for at least 55% of all mortality. Relative predation risk was greatest through impoundments and the lower estuary, where on average, predation rates were 4.8-fold and 9.0-fold greater than free-flowing reaches, respectively. These results suggest that predation pressure on Atlantic salmon smolts is exacerbated by hydropower projects and that predation in the lower estuary may be greater than expected.

Maine↗
USGS2024

Habitat use of anadromous and amphidromous sturgeons in North America: A systematic review

Sturgeons are among the most endangered fishes in the world. Identifying habitat use characteristics to inform restoration projects is crucial for recovery. However, small sample sizes, inadequate replication of studies, and limited spatial extents complicate our ability to effectively apply the findings of single studies to endangered species conservation across the larger riverscape. We synthesized information from amphidromous and anadromous sturgeons in North America to identify species-specific knowledge gaps and conduct a quantitative comparison of species–habitat relationships. We provided a qualitative summary of substrate use and synthesized estimates of depth and velocity during spawning and non-spawning activity. Generalized patterns among species were identified, such as spawning in fast water on hard substrate and then using slow water with soft substrate areas when not spawning. We noted species-specific variability during spawning that may be attributed to historical maximum length, egg characteristics, and watershed features. This study provides some of the first estimates of habitat use that can be adapted for many populations. Results can contribute to empirically grounded decision-support tools used to prioritize information needs for recovery.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2024

An integrative approach to assessing bridle shiner (Notropis bifrenatus) distribution using environmental DNA and traditional techniques

The bridle shiner ( Notropis bifrenatus ) is a small cyprinid native to the eastern United States and Canada. Bridle shiner populations have declined across their range, and the species now receives concern status or legal protection in 13 states and two provinces. Bridle shiners were historically found in southern and western Maine in densely vegetated, shallow habitats along the shorelines of streams and ponds. We surveyed areas of Maine that supported historical bridle shiner populations using environmental DNA (eDNA) and traditional seine netting methods, and then used eDNA sampling to survey areas with unknown bridle shiner presence. We rediscovered bridle shiner populations at 11 of 32 historically occupied waterbodies and documented bridle shiners in four additional waterbodies. We determined that both eDNA and seine net surveys are viable options for monitoring bridle shiners in Maine and identified ways to streamline the eDNA methods used in this study to reduce the time and cost of future surveys.

Maine↗
USGS2024

Sprinting performance and behavior of adult shortnose sturgeon (Acipenser brevirostrum)

Swimming ability and performance are central to the ecology of aquatic species and to the design of structures intended to promote access to habitat. This is particularly important for migratory species traveling over significant distances. Here, we present results of a study of swimming behaviors of adult shortnose sturgeon ( Acipenser brevirostrum ). Sturgeon were presented with velocity challenges of 0.5–2.5 m·s ‒1 in a 35 m long flume that they were allowed to enter and ascend volitionally. Attempt rate was greatest among large sturgeon, at warm temperatures, and at low flow velocities. Sturgeon swam for shorter distances and durations against high-velocity flows; larger sturgeon had greater overall performance and endurance, but when velocities were standardized to body lengths the relative performance was reduced with increased body size. Overall, however, sturgeon were able to swim at much greater speeds than previously predicted, consistent with other studies showing that volitional performance exceeds that of data collected in common laboratory apparatus.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2024

Differences in life history patterns of American shad, Alosa sapidissima, populations between ancestral, Atlantic coast, and non-native, Pacific coast rivers of North America

Organisms naturalized outside their native range can reveal new life history patterns in new environments. Here, we compare life history patterns of American shad, Alosa sapidissima, from five rivers along the U.S. Pacific coast (introduced range) with contemporary data from the Atlantic coast source populations. The Pacific coast fish grew slower, matured at a younger age, and were less often iteroparous than conspecifics from the Hudson River and Susquehanna River sources. Differences among the Pacific coast populations indicated that some combination of phenotypic plasticity and genetic adaptation has occurred since the transplants in the 1870s. Microchemical analysis of otoliths from returning adults demonstrated an immature, extended freshwater life history form, locally known as “mini-shad”. These fish remain in the river for at least 1 year or enter salt water briefly and then return to fresh water for several months prior to subsequent seaward migration and return as adults. This and other forms of variation (extent of estuary use and size at sea water entry) expand the understanding of Alosine migration and life history diversity.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2024

Synchrony of alewife, Alosa pseudoharengus, year-class strength in the Great Lakes region

Fish recruitment is interannually variable and challenging to predict. Annual recruitment is often regionally synchronized among populations and identifying drivers of such synchrony may help shed light on recruitment dynamics. We investigated interannual variation of alewife Alosa pseudoharengus recruitment by estimating year-class strength for populations from three of the Laurentian Great Lakes (lakes Huron, Michigan, and Ontario) using annual assessment survey data from 1968 to 2022. We first determined the age when year-class strength was set for each dataset. We then used a mixed-modeling approach incorporating age, year-class, and sampling year to estimate year-class strength for each study lake. Thereafter, we evaluated regional synchrony in year-class strength across the three lakes and evaluated potential climatic drivers of synchrony. Our results suggest that alewife year-class strength is set by age-1. Our model-derived indices of alewife year-class strength were synchronized among the three lakes, and we identified spring-summer degree-days as a potential regional driver of synchrony. This analysis highlights the potential for strong influence of climatic conditions on fish recruitment in large freshwater systems.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2024

Effects of temperature, body size, and sex on the standard metabolic rates of a sexually dimorphic freshwater piscivore, walleye (Sander vitreus)

Walleye ( Sander vitreus ) are a sexually dimorphic freshwater piscivore that have long been studied using bioenergetics modeling, yet robust estimates of metabolic rates for use in those models have been lacking. Therefore, we quantified the effects of body mass, water temperature, and sex, on standard metabolic rate (SMR). We estimated SMR across temperatures ranging 0.5–24 °C using intermittent-flow respirometry for male ( n = 54) and female ( n = 53) walleye raised in hatchery conditions. We found a significant interaction between sex and temperature, whereby males had lower SMR below 16 °C, but increased such that SMR was ∼16% higher than females at 22 °C. The mass-scaling coefficient, b , was similar for both sexes at a value around 1. These estimates are the first to be generated using respirometry for adult walleye and differ slightly from those being used by previous bioenergetics models, which may have underestimated the energetic costs of SMR, and did not include sex-specific estimates for metabolism.

Canadian Journal of Fisheries and Aquatic Sciences↗
USGS2024

Multi-decadal trophic shifts in Lake Erie yellow perch Perca flavescens

In Lake Erie, yellow perch Perca flavescens support vast commercial and recreational fisheries, yet populations have recently declined. Using N = 5889 yellow perch stomachs collected from 1997 to 2021, we explored trends in the feeding ecology and trophic level of yellow perch with generalized additive models. Models revealed a significant decrease in yellow perch trophic level (−0.15 trophic levels in the last decade), and significant dietary shifts. Yellow perch have shifted away from feeding on piscine prey and round goby Neogobius melanostomus over the 25-year period, and now feed on invertebrates more frequently—including invasive waterfleas ( Bythotrephes longimanus and Cercopagis pengoi ) and chironomids. Dietary patterns appear to reflect broad ecological changes—invasive waterfleas have proliferated while populations of forage fish and round goby have declined. Furthermore, hypoxia events have increased in duration and severity, which may explain observed increases in chironomid consumption, which are hypoxia tolerant. This study demonstrates trophic adaptability in yellow perch, which have changed feeding behavior and trophic position in response to novel invaders and changing environmental conditions.

Lake Erie↗
USGS2024

Declines and shifts in morphological diversity of ciscoes (Coregonus spp.) in lakes Huron and Michigan, 1917–2019

Ciscoes ( Coregonus spp . ) were historically abundant and ecologically important in Laurentian Great Lakes ecosystems. Despite well-documented declines in their abundance and taxonomic diversity, declines in morphological diversity remain understudied. This knowledge gap is especially pertinent for lakes Michigan and Huron, which have each lost six of eight historical species. Improved understanding of historical and contemporary morphological diversity of Great Lakes ciscoes can inform ongoing restoration efforts and further elucidate the factors that contributed to declines. Our goal was to characterize shifts in morphological diversity of ciscoes in lakes Michigan and Huron over a century (1917–2019). We analyzed size-corrected morphometric and meristic measurements from three periods: Early (1917–1923), Middle (1950–1972), and Contemporary (2015–2019). We then identified morphologically distinct clusters while remaining agnostic to species identifications. We found that morphological diversity and the number of distinct clusters declined over time. We then leveraged species identifications to highlight key species losses and examine morphological shifts among extant species. Our findings provide insights into the historical and contemporary morphological diversity of ciscoes and will inform restoration efforts.

Lake Huron, Lake Michigan↗
USGS2024

Diminishing productivity and hyperstable harvest in northern Wisconsin walleye fisheries

Managing fisheries in a changing socio-ecological environment may require holistic approaches for identifying and adapting to novel ecosystem dynamics. Using 32 years of Ceded Territory of Wisconsin (CTWI) walleye (Sander vitreus) data, we estimated production (P), biomass (B), biomass turnover (P/B), yield (Y), and yield over production (Y/P) and tested for hyperstability in walleye yield. Most CTWI walleye populations showed low P, and B, and Y/P < 1. Yet, production overharvest (Y/P > 1) was prevalent among Wisconsin walleye recruitment-based management approaches (natural recruitment [NR], sustained only by stocking, combination). Production, B, and P/B have declined in NR populations, while Y and Y/P have remained constant. Walleye Y was hyperstable along a production gradient among all management approaches and fishery types (i.e., angling only, angling/tribal harvest combined). Diminishing productivity and hyperstable yield may be jointly contributing to observed walleye declines. We classified lakes into management groups of low, moderate, or high vulnerability to harvest based on Y/P and P/B dynamics and recommend that exploitation may need to decline to maintain or increase the adaptive capacity of CTWI walleye.

Wisconsin↗
USGS2024

Applying mark-resight, count, and telemetry data to estimate effective sampling area and fish density with stationary underwater cameras

Accurate estimates of abundance and density for geographically open populations must account for the effective sampling area (ESA) of sampling gears. We describe a Marked N-Mixture model to estimate ESA and density (number of individuals/unit area) from repeated counts of unmarked and marked individuals, integrating mark-resight, camera counts, and telemetry data of red snapper ( Lutjanus campechanus ) at a 1.6 km 2 reef off North Carolina, USA. Cameras recorded observations of unmarked and marked individuals, whereas telemetry data indicated the number of tagged fish present on the reef. We estimated density (95 individuals/km 2 , 95%CI: 58–149), ESA (which was lower when current direction was towards the camera), detection probability (0.06, 95%CI: 0.03–0.09), and covariate relationships. Simulation studies under different scenarios of data quality and space use identified positive bias in density estimates from N-mixture models due to fish movement. In contrast, the Marked N-Mixture model returned unbiased estimates of density, ESA, and detection parameters, and appears to be a more robust method for modeling density given the data available for this analysis. This approach can be applied to other populations where count and telemetry data overlap in space and time.

North Carolina↗
USGS2024

Cycles in adult steelhead length suggest interspecific competition in the North Pacific Ocean

Anadromous fishes rely on abundant prey in the ocean to grow large quickly, but prey limitation leads to interspecific competition. When species interactions are difficult to observe, growth can be studied to detect otherwise cryptic signals of competition. We describe a previously undocumented two-year cycle in the lengths of adult natural-origin steelhead ( Oncorhynchus mykiss ) returning to spawn in the Snake River Basin. Returning steelhead were 38 mm shorter on odd return years, not accounting for sex, stock, and years of ocean residence. The well-known cycle in abundance of Pink Salmon from eastern Kamchatka and North America had statistically significant negative effects on returning steelhead lengths that depended on sex and the number of years of ocean residence. These results suggest that competition for limited resources occurs well after initial ocean entry and that interactions during later stages of ocean residence can be influential. Interspecific competition has implications for future returns of steelhead from the ocean, especially as metabolic demands for steelhead increase as the ocean warms.

North Pacific Ocean↗