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Temporal, environmental, and demographic correlates of Ichthyophonus sp. infections in mature Pacific herring populations

Causes of population collapse and failed recovery often remain enigmatic in marine forage fish like Pacific herring ( Clupea pallasii ) that experience dramatic population oscillations. Diseases such as ichthyophoniasis are hypothesized to contribute to these declines, but lack of long-term datasets frequently prevents inference. Analysis of pathogen surveillance and population assessment datasets spanning 2007–2019 indicate that the age-based prevalence estimate of Ichthyophonus infection was, on average, 54% greater among a collapsed population of Pacific herring (Prince William Sound, Alaska, USA) as compared to a nearby population (Sitka Sound, Alaska, USA) that is relatively robust. During the study years, the age-based infection prevalence ranged from 14 to 44% in Prince William Sound and 5 to 33% in Sitka Sound. At both sites, the age-based infection prevalence declined over time, with an average decrease of 7% per year. Statistical analyses indicated that infection prevalence between the two populations was reduced by regional factors affecting both sites, and that these factors were independent of herring density. Infection prevalence in both populations was positively correlated with herring age and negatively correlated with the Pacific Decadal Oscillation. This study demonstrates how synthesis of environmental, stock assessment, and disease assessment data can be leveraged to elucidate epidemiological trends in diseases of wild fish.

ICES Journal of Marine Science

Relatedness and nesting dispersion within breeding populations of Greater White-fronted Geese

We studied patterns of relatedness and nesting dispersion in female Pacific Greater White-fronted Geese ( Anser albifrons frontalis ) in Alaska. Female Greater White-fronted Geese are thought to be strongly philopatric and are often observed nesting in close association with other females. Analysis of the distribution of nests on the Yukon-Kuskokwim Delta in 1998 indicated that nests were significantly clumped. We tested the hypothesis that females in the same nest cluster would be closely related using estimates of genetic relatedness based on six microsatellite DNA loci. There was no difference in the mean relatedness of females in the same cluster compared to females found in different clusters. However, relatedness among females was negatively correlated with distance between their nests, and geese nesting within 50 m of one another tended to be more closely related than those nesting farther apart. Randomization tests revealed that pairs of related individuals (R > 0.45) were more likely to occur in the same cluster when analyzed at the scale of the entire study site. However, the pattern did not hold when restricted to pairs found within 500 m of each other. Our results indicate that nest clusters are not composed primarily of closely related females, but Greater White-fronted Geese appear to be sufficiently philopatric to promote nonrandom patterns of relatedness at a local scale.

Alaska

Vulnerability of Pacific salmon to invasion of northern pike (Esox lucius) in Southcentral Alaska

The relentless role of invasive species in the extinction of native biota requires predictions of ecosystem vulnerability to inform proactive management strategies. The worldwide invasion and range expansion of predatory northern pike ( Esox lucius ) has been linked to the decline of native fishes and tools are needed to predict the vulnerability of habitats to invasion over broad geographic scales. To address this need, we coupled an intrinsic potential habitat modelling approach with a Bayesian network to evaluate the vulnerability of five culturally and economically vital species of Pacific salmon ( Oncorhynchus spp.) to invasion by northern pike. This study was conducted along 22,875 stream km in the Southcentral region of Alaska, USA. Pink salmon ( O . gorbuscha ) were the most vulnerable species, with 15.2% (2,458 km) of their calculated extent identified as “highly” vulnerable, followed closely by chum salmon ( O . keta , 14.8%; 2,557 km) and coho salmon ( O . kisutch , 14.7%; 2,536 km). Moreover, all five Pacific salmon species were highly vulnerable in 1,001 stream km of shared habitat. This simple to implement, adaptable, and cost-effective framework will allow prioritizing habitats for early detection and monitoring of invading northern pike.

Alaska

Performance comparisons for artificially propagated and wild Pacific lamprey juveniles and larvae

Artificially propagated Pacific lamprey ( Entosphenus tridentatus ) are produced for restoration and for use in dam passage studies to reduce the demand for wild fish. Such uses require that animals are representative of their wild counterparts. Previous work indicated that this is true for Pacific lamprey larvae and juveniles reared in the hatchery with respect to the length of sustained swimming. However, more subtle differences in behaviour and performance that lamprey need to survive have not been assessed. In this study, artificially propagated and wild fish were compared in laboratory tests under no-flow conditions to examine light avoidance, burrowing speed, burst swim speed, volitional routine swim speed and time to come to rest. Most larvae burrowed in less than a minute, and we found highly significant differences ( p < 0.001) between artificially propagated and wild larvae burrowing times, a critical escape behaviour. This could have implications for studies of larval entrainment at irrigation diversion canals or in turbine boils at dams. Interestingly, all of the wild juveniles tested came to rest quickly after introduction to the chamber (1.5 min), while artificially propagated lamprey swam robotically near the surface and 48% did not come to rest in the first 10 min (median time to rest = 9.5 min). In contrast, wild juveniles quickly (median = 1.47 min) sought areas near the tank bottom and attached strongly with their oral disc. Such behavioural differences could have important survival consequences for artificially propagated lamprey as they approach turbine intakes, bypass screens and irrigation diversion headgates. This study highlights the need to conduct behavioural assays that examine subtleties of fish behaviour that can be missed with traditional swim tunnel comparisons.

Aquaculture, Fish and Fisheries

Tufts submarine fan: turbidity-current gateway to Escanaba Trough

Turbidity-current overflow from Cascadia Channel near its western exit from the Blanco Fracture Zone has formed the Tufts submarine fan, which extends more than 350 km south on the Pacific Plate to the Mendocino Fracture Zone. For this study, available 3.5-kHz high-resolution and airgun seismic-reflection data, long-range side-scan sonar images, and sediment core data are used to define the growth pattern of the fan. Tufts fan deposits have smoothed and filled in the linear ridge-and-valley relief over an area exceeding 23,000 km2 on the west flank of the Gorda Ridge. The southernmost part of the fan is represented by a thick (as much as 500 m) sequence of turbidite deposits ponded along more than 100 km of the northern flank of the Mendocino Fracture Zone. Growth of the Tufts fan now permits turbidity-current overflow from Cascadia Channel to reach the Escanaba Trough, a deep rift valley along the southern axis of the Gorda Ridge. Scientific drilling during both the Deep Sea Drilling Project (DSDP) and the Ocean Drilling Program (ODP) provided evidence that the 500-m-thick sediment fill of Escanaba Trough is dominantly sandy turbidites. Radiocarbon dating of the sediment at ODP Site 1037 showed that deposition of most of the upper 120 m of fill was coincident with Lake Missoula floods and that the provenance of the fill is from the eastern Columbia River drainage basin. The Lake Missoula flood discharge with its entrained sediment continued flowing downslope upon reaching the ocean as hyperpycnally generated turbidity currents. These huge turbidity currents followed the Cascadia Channel to reach the Pacific Plate, where overbank flow provided a significant volume of sediment on Tufts fan and in Escanaba Trough. Tufts fan and Tufts Abyssal Plain to the west probably received turbidite sediment from the Cascadia margin during much of the Pleistocene.

Escanaba Trough

Detailed study of water quality, bottom sediment, and biota associated with irrigation drainage in the Klamath Basin, California and Oregon, 1990-92

The effect of irrigation drainage on the water quality and wildlife of the Klamath Basin in California and Oregon was evaluated during 1990-92 as part of the National Irrigation Water Quality Program of the U.S. Department of the Interior. The study focused on land serviced by the Bureau of Reclamation Klamath Project, which supplies irrigation water to agricultural land in the Klamath Basin and the Lost River Basin. The Tule Lake and Lower Klamath National Wildlife Refuges, managed by the U.S. Fish and Wildlife Service, are in the study area. These refuges provide critical resting and breeding habitat for waterfowl on the Pacific flyway and are dependent on irrigation drainwater from upstream agriculture for most of their water supply. Water-quality characteristics throughout the study area were typical of highly eutrophic systems during the summer months of 1991 and 1992. Dissolved-oxygen concentrations and pH tended to fluctuate each day in response to diurnal patterns of photosynthesis, and frequently exceeded criteria for protection of aquatic organisms. Nitrogen and phosphorus concentrations were generally at or above threshold levels characteristic of eutrophic lakes and streams. At most sites the bulk of dissolved nitrogen was organically bound. Elevated ammonia concentrations were common in the study area, especially downstream of drain inputs. High pH of water increased the toxicity of ammonia, and concentrations exceeded criteria at sites upstream and downstream of irrigated land. Concentrations of ammonia in samples from small drains on the Tule Lake refuge leaseland were higher than those measured in the larger, integrating drains at primary monitoring sites. The mean ammonia concentration in leaseland drains [1.21 milligrams per liter (mg/L)] was significantly higher than the mean concentration in canals delivering water to the leaseland fields (0.065 mg/L) and higher than concentrations reported to be lethal to Daphnia magna (median lethal concentration of 0.66 mg/L). Dissolved-oxygen concentrations also were lower, and Daphnia survivability measured during in situ bioassays was correspondingly lower in the leaseland drains than in water delivery canals. In static laboratory bioassays, water samples collected at the primary monitoring sites caused toxicity in up to 78 percent of Lemna minor tests, in up to 49 percent of Xenopus laevis tests, in 17 percent and 8 percent of Hyalella azteca and Pimephales promelas tests, respectively, and 0 percent in Daphnia magna tests. In situ exposure at the sites caused mortality in more than 83 percent of Pimephales tests and in more than 41 percent of Daphnia and Hyalella tests. Much of the observed toxicity appears to have been caused by low dissolved oxygen, high pH, and ammonia. Although water in the study area was toxic to a variety of organisms, no statistically significant differences in the degree of toxicity between sites were observed above or below irrigated agricultural land in any of the bioassays. Pesticides were frequently detected in water samples collected at the monitoring sites during the 1991 and 1992 irrigation seasons. Among the most frequently detected compounds were the herbicides simazine, metribuzin, EPTC, and metolachlor and the insecticide terbufos. All the insecticides detected were at concentrations substantially below acute toxicity values reported for aquatic organisms. The herbicide acrolein has been used extensively in the basin to manage aquatic plant growth in irrigation canals and drains. The concentration of acrolein was monitored in a canal near Tule Lake after an application in order to evaluate the potential for the pesticide to be transported to refuge waters. Although acrolein concentrations were toxic to fish in the channels adjacent to Tule Lake, very little of the canal water entered the refuge during the monitoring period. Organochlorine pesticide concentrations in 25 surficial sediment samples collected in 1990 were below baseline levels commonly found in soils and sediment. Seventeen sediment samples were analyzed for chlorophenoxy acid herbicides and two samples were analyzed for organophosphorus and carbamate insecticides in 1992. No pesticides were detected in any of these samples. Residues of the trace elements selenium, mercury, and arsenic in algae, invertebrates, fish, and avian eggs revealed no bioaccumulation problems. Concentrations of organochlorine compounds, especially of p,p' DDE, were associated with a mean 11-percent eggshell thinning in white-faced ibis. However, ibis populations appear to be increasing, and some eggs of ibis were relatively low in DDE concentration. DDE concentrations in eggs of western grebes were not as high as in the eggs of ibis. Concentrations and types of organochlorine compounds detected in grebe and ibis eggs were highly variable, indicating that the birds were exposed to these compounds outside the basin. Fish and invertebrates inhabiting drainwater were representative of pollution-tolerant species assemblages. The aquatic communities retained little of their historic ecological structure. Extensive hydrologic modifications and hypereutrophic conditions in Klamath Basin waterways have degraded the quality of aquatic habitat and altered aquatic communities.

California, Oregon

Examining the role of unusually warm Indo‐Pacific sea‐surface temperatures in recent African droughts

Southern Africa (SA) and eastern Africa (EA) experienced a sequence of severe droughts in December–February (SA DJF) 2015–2016, October–December (EA OND) 2016 and March–April–May 2017 (EA MAM). This sequence contributed to severe food insecurity. While climate variability in these regions is very complex, the goal of this study is to analyse the role played by unusually warm Indo–Pacific SSTs, where unusual is defined as a 1‐in‐6 year event. We use observed sea‐surface temperatures (SST) and satellite–gauge rainfall observations, a 20‐member ensemble of Community Atmospheric Model version 5.1 simulations (CAM5), and a 40‐member ensemble of climate change simulations from the Community Earth Systems Model version 1 (CESM1) Large Ensemble Community Project (LENS) to explore climate conditions associated with warm events identified based on eastern and western Pacific SSTs. Our analysis suggests that strong El Niño's may be followed by warm western Pacific SST conditions, which can lead to conditions conducive to successive and potentially predictable droughts in SA DJF, EA OND and EA MAM. We show that different regions of warm SST are related to recent droughts—SA DJF: Niño 3.4; EA OND: western equatorial Pacific (WEP); and EA MAM: western North Pacific (WNP). For DJF and MAM, respectively, the CAM5 model driven with observed SST and the same model driven within a climate change experiment indicate that warmer El Niño's and WNP events produce more intense atmospheric responses, potentially associated with more severe droughts. OND climate seems to be strongly influenced by the Indian Ocean Dipole, which corresponds with some WEP events. Given global warming, we suggest that the extreme Niño 3.4 and west Pacific SST events responsible for 2015–2017 droughts are likely to reoccur, thus humanitarian agencies should prepare to predict and respond to multi‐year drought and substantial food insecurity in SA and EA.

Journal of the Royal Meteorological Society

Diatom biostratigraphy and paleoecology of the type section of the Luisian Stage, central California

Diatoms from the type section of the Luisian Stage in central California correlate with the lowermost part of the Denticulopsis lauta Zone through the lower part of subzone "a" of the Denticulopsis hustedtii-D. lauta Zone and are early Middle Miocene in age (about 6.0 to 14.0 Ma), Rocks assigned to the Luisian Stage by benthic foraminifers elsewhere in California exhibit little diachroneity in terms of diatom biostratigraphy, however, detailed studies of boundaries have not been done. Planktic diatoms dominate the assemblages, although an increase in benthic and tychopelagic diatoms in the overlying Hames Member of the Monterey Formation probably reflects shoaling. A cooling trend is suggested by diatom assemblages in the upper part of the section and is most marked near the top of the type Luisian. This cooling trend is supported by data elsewhere in the Pacific Basin as well as by both megafossil and microfossil studies in California. One hundred four diatom taxa are documented, and one new species, Coscinodiscus volutus Baldauf, is described.

California

Sediment transport in a restored, river-influenced Pacific Northwest estuary

Predicting the success of future investments in coastal and estuarine ecosystem restorations is limited by scarce data quantifying sediment budgets and transport processes of prior restorations. This study provides detailed analyses of the hydrodynamics and sediment fluxes of a recently restored U.S. Pacific Northwest estuary, a 61 ha former agricultural area near the mouth of the Stillaguamish River in Washington, USA. Water level, flow velocity, and suspended-sediment concentration (SSC) were measured between 21 March 2014 and 1 June 2015 at breaches excavated in the former flood-protection levee to determine transport patterns and the net sediment budget of the restoration area. SSC within the restoration area was primarily controlled by SSC variability of the nearby main stem Stillaguamish, but coastal processes also played a major role in sediment delivery. Fluvial sediment loading was dominated by runoff events associated with rainfall that lasted hours to a few days. Additionally, the 22 March 2014 SR 530 (Oso) landslide elevated sediment supply to the restoration area and coastal region for several weeks, indicating the importance of distal geomorphic events to coastal sediment budgets in small mountainous river systems. Sediment fluxes were controlled by river SSC and tidal dynamics, which set the quantity of water transported into the restoration area. Peak water discharge at the restoration area was about 12% of the river discharge, and peak sediment flux at the restoration area was about 5% of the river sediment discharge, although net sediment import was < 1% of the total river load. Although sediment was imported to the restoration area, and inferred rates of accretion appear sufficient to keep pace with present rates of local sea-level rise, full recovery is challenged by significant lost grade from historical subsidence and will likely take decades to centuries. These results have implications for estuary restoration planning globally and indicate the importance of understanding coupled fluvial–coastal processes.

Washington

Introduction to study area hydrogeology, chromium sources, site history, and purpose of study

Between 1952 and 1964, hexavalent chromium, Cr(VI), was released into groundwater from the Pacific Gas and Electric Company (PG&E) Hinkley compressor station in the Mojave Desert 80 miles (mi) northeast of Los Angeles, California. Remediation began in 1992, and in 2010, site cleanup was projected to require between 10 and 95 years and was expected to cost between $36 and $176 million. A 2007 PG&E study estimated the natural Cr(VI) background in groundwater in Hinkley Valley to be 3.1 micrograms per liter (μg/L). This concentration was used for interim regulatory purposes by the Lahontan Regional Water Quality Control Board (RWQCB). In the fourth quarter (October–December) 2015, the regulatory Cr(VI) plume extended about 3.0 mi downgradient from the release location within the Hinkley compressor station, while groundwater having Cr(VI) concentrations greater than 3.1 μg/L was present more than 8 mi downgradient. Although rocks and minerals in the area are naturally low in chromium, alluvium eroded from the San Gabriel Mountains and transported to Hinkley Valley by the Mojave River, and locally small exposures of mafic rock, including hornblende diorite and basalt, may contribute Cr(VI) to groundwater. In response to limitations of the PG&E 2007 Cr(VI) background study’s methodology, uncertainty in the natural Cr(VI) background concentration, and an increase in the mapped extent of groundwater having Cr(VI) concentrations greater than the interim regulatory background of 3.1 μg/L, the Lahontan RWQCB concluded that the 2007 PG&E background Cr(VI) study should be updated. The purpose of the updated study is to estimate background Cr(VI) concentrations in groundwater within the upper aquifer upgradient, downgradient, near the margins, and within the footprint of the PG&E Cr(VI) plume in Hinkley, California. The scope of the study included eight tasks; results from those tasks are presented in the chapters within this professional paper.

California

Foundations of modeling resilience of tidal saline wetlands to sea-level rise along the U.S. Pacific Coast

Context Tidal saline wetlands (TSWs) are highly threatened from climate-change effects of sea-level rise. Studies of TSWs along the East Coast U.S. and elsewhere suggest significant likely losses over coming decades but needed are analytic tools gauged to Pacific Coast U.S. wetlands. Objectives We predict the impacts of sea-level rise (SLR) on the elevation capital (vertical) and migration potential (lateral) resilience of TSWs along the Pacific Coast U.S. over the period 2020 to 2150 under a 1.5-m SLR scenario, and identified TSWs at risk of most rapid loss of resilience. Here, we define vertical resilience as the amount of elevation capital and lateral resilience as the amount of TSW displacement area relative to existing area. Methods We used Bayesian network (BN) modeling to predict changes in resilience of TSWs as probabilities which can be useful in risk analysis and risk management. We developed the model using a database sample of 26 TSWs with 147 sediment core samples, among 16 estuary drainage areas along coastal California, Oregon, and Washington. Results We found that all TSW sites would lose at least 50% of their elevation capital resilience by 2060 to just before 2100, and 100% by 2070 to 2130, depending on the site. Under a 1.5-m sea-level rise scenario, nearly all sites in California will lose most or all of their lateral migration resilience. Resilience losses generally accelerated over time. In the BN model, elevation capital resilience is most sensitive to elevation capital at time t, mean tide level at time t, and change in sea level from time 0 to time t. Conclusions All TSW sites were projected with declines in resilience. Our model can further aid decision-making such as prioritizing sites for potential management adaptation strategies. We also identified variables most influencing resilience predictions and thus those potentially prioritized for monitoring or development of strategies to prevent loss regionally.

California, Oregon, Washington

Development and validation of a quantitative PCR to detect Parvicapsula minibicornis and comparison to histologically ranked infection of juvenile Chinook salmon, Oncorhynchus tshawytscha (Walbaum), from the Klamath River, USA

Parvicapsula minibicornis is a myxosporean parasite that is associated with disease in Pacific salmon during their freshwater life history phase. This study reports the development of a quantitative (real-time) polymerase chain reaction (QPCR) to detect P. minibicornis DNA. The QPCR assay targets the 18S ribosomal subunit gene. A plasmid DNA control was developed to calibrate cycle threshold (C T ) score to plasmid molecular equivalent (PME) units, a measure of gene copy number. Assay validation revealed that the QPCR was sensitive and able to detect 50 ag of plasmid DNA, which was equivalent to 12.5 PME. The QPCR assay could detect single P. minibicornis actinospores well above assay sensitivity, indicating a single spore contains at least 100 times the 18S DNA copies required for detection. The QPCR assay was repeatable and highly specific; no detectable amplification was observed using DNA from related myxozoan parasites. The method was validated using kidney tissues from 218 juvenile Chinook salmon sampled during the emigration period of March to July 2005 from the Klamath River. The QPCR assay was compared with histological examination. The QPCR assay detected P. minibicornis infection in 88.1% of the fish sampled, while histological examination detected infection in 71.1% of the fish sampled. Good concordance was found between the methods as 80% of the samples were in agreement. The majority of the disconcordant fish were positive by QPCR, with low levels of P. minibicornis DNA, but negative by histology. The majority of the fish rated histologically as having subclinical or clinical infections had high QPCR levels. The results of this study demonstrate that QPCR is a sensitive quantitative tool for evaluating P. minibicornis infection in fish health monitoring studies. ?? 2008 Blackwell Publishing Ltd.

California, Oregon

Modified method for external attachment of transmitters to birds using two subcutaneous anchors

Of the transmitter attachment techniques for birds, the subcutaneous anchor provides a secure attachment that yields relatively few secondary effects. However, the use of subcutaneous anchors has been limited by transmitter size and retention time. Using a modified method of attachment that utilized two subcutaneous anchors, we deployed 69 GPS transmitters, plus 13 VHF transmitters that were similar in size and weight to GPS models, on Pacific Black Brant ( Branta bernicla nigricans ). Prior to our study, only harnesses were used for attaching GPS transmitters on birds, mainly because GPS transmitters are too large for other external attachment techniques and implantation in the body cavity attenuates the GPS signal. Thus, to increase the size capacity of anchor attachment and to avoid the well‐documented negative effects of harnesses on behavior and survival, we added a second anchor at the transmitter's posterior end. The double‐anchor attachment technique was quickly and easily accomplished in the field, requiring bird handling times of <10 min. Incidental recoveries of tagged Brant indicate a high degree of transmitter retention. Five recaptured birds (4–6 weeks after deployment) and eight killed by hunters (3–6 mo after deployment) retained their GPS transmitters. For studies involving the use of relatively large transmitters, the double‐anchor method appears to provide a viable alternative for external attachment.

Journal of Field Ornithology

Evaluation of larval sea lamprey Petromyzon marinus growth in the laboratory: Influence of temperature and diet

Conservation aquaculture provides a means for promoting environmental stewardship, useful both in the context of restoring native species and limiting the production of invasive species. Aquaculture of lampreys is a relatively recent endeavor aimed primarily at producing animals to support the restoration of declining native populations. However, in the Laurentian Great Lakes, where sea lamprey Petromyzon marinus are invasive, the ability to acquire a reliable source of certain life stages would be a significant benefit to those controlling their populations and studying the species. Here, we apply methodologies developed for Pacific lamprey Entosphenus tridentatus restoration to investigate the feasibility of rearing larval sea lamprey under laboratory conditions. In two experiments lasting 3 and 9 months, we tested the effects of different dietary sources and water temperature (ambient and controlled) on the survival and growth of wild-caught larvae. Rearing conditions had no effect on mortality, as larval survival was 100% in both experiments. Growth was significantly affected by water temperature, with the highest average daily growth rates observed at 22 and 15°C (0.14 mm day −1 ) and lowest at 8°C (0.06 mm day −1 ). Diets of yeast alone (0.19 and 0.21 g L −1 ) performed better than those comprising a mixture of yeast and other material when fed 3 times weekly (rice flour, wheat flour, fish meal; 0.19 and 0.32 g L −1 ). Averaged across the three constant temperatures (8, 15, and 22°C), larvae fed on yeast grew 0.13 mm day −1 and 0.01 g day −1 , whereas on yeast + fish meal, they grew 0.09 mm day −1 and 0.01 g day −1 . At ambient temperature (4–20°C), larvae fed on yeast grew 0.15 mm day −1 and 0.01 g day −1 , whereas those fed on yeast + wheat flour grew 0.13 mm day −1 and 0.008 g day −1 and those fed on yeast + rice flour grew 0.12 mm day −1 and 0.009 g day −1 . An experimental duration of 90 days was sufficient to detect significant changes to larval sea lamprey growth stemming from temperature variation. Overall, rearing of sea lamprey in captivity appears feasible at low density (31–32 g m −2 and 17–25 larvae m −2 ), but uncertainties remain regarding the most appropriate means of providing adequate feed for these fish in high-density conditions.

Aquaculture Research

Breeding biology of Pacific white-fronted geese

Nesting ecology of Pacific white-fronted geese ( Anser albifrons frontalis ) was studied on a 9.9-km 2 area on the Yukon-Kuskokwim (Y-K) Delta, Alaska, during 1977-79. Availability of nesting habitat varied considerably among years because of differences in time of snow- and icemelt. Mean clutch size was 3.7 eggs in the late spring thaw year and 5.2 and 5.7 eggs in early snowmelt years. Peak (and duration) of nest initiation was 1-2 June (16 days) in the late spring and 15-18 May (20-21 days) during early springs. When nest sites were available early, the time interval between arrival and date of nest initiation closely approximated the time required for rapid yolk development. This suggests that whitefronts may be physiologically prevented from nesting earlier in such years. The duration of nest initiation was comparable to that of other goose species nesting on the Y-K Delta, but longer than for goose populations of several species nesting farther north or in the midcontinent. Overall, 68% of whitefront nests were in lowland habitat, 23% in intermediate habitat, and 10% in upland habitat, but habitat use varied significantly between early and late years. Whitefronts most commonly nested on slough banks (55%), lake shores (23%), and grass-sedge meadows (11%). A quantitative description of vegetation associated with nest sites is given. Major causes of nest destruction were flooding (28%) and predation (9%). Nesting success over the 3-year period averaged 62%.

Alaska

Silicoflagellate stratigraphy of offshore California and Baja California, Deep Sea Drilling Project, Leg 63.

Quantitative study of middle and upper Miocene silicoflagellate assemblages from Pacific Coast Sites 467 and 469 to 472 has permitted identification of warm- and temperate-water biostratigraphic zones and the formulation of a model for relative paleotemperature values (Ts) on the basis of warm- and temperate-genera abundances. Geographic and temporal trends in Ts for Pacific Coast assemblages are indicated. Three new taxa are described: Dictyocha subclinata Bukry n. sp., Mesocena diodon borderlandensis Bukry n. subsp., and M. hexalitha Bukry, n. sp. The ranges in space and time for several species, such as Dictyocha neonautica var. cocosensis and Distephanus mesophthalmus, are increased. Regionally, barred forms of Distephanus stauracanthus become predominant over ringed forms in the upper part of the middle Miocene Distephanus stauracanthus Subzone.

California

Geologic map of Scoggins Dam, Henry Hagg Lake, and Scoggins Valley, Washington County, Oregon

New geologic mapping (Wells and others, 2020b) and geophysical mapping (Blakely and others, 2000; McPhee and others, 2014; Wells and others, 2020a) document kilometers of Cenozoic right-lateral offset along the Gales Creek Fault Zone, a major, northwest-striking fault zone forming the boundary between the Tualatin Valley and the Coast Range. The Bureau of Reclamation’s (Reclamation) Scoggins Dam (fig. 1), in the Coast Range foothills west of Forest Grove, Oregon, lies within the Gales Creek Fault Zone as mapped by Wells and others (2020a, 2020b; fig. 2). Active faults of the Gales Creek Fault Zone defined by paleoseismic trenching (Redwine and others, 2017, 2019b, Horst and others, 2018, 2019, 2021, and Wells and others, 2020a) are presently mapped as projecting through the existing dam. The Pacific Northwest Region of Reclamation requested assistance with geologic studies around Scoggins Dam to provide better understanding of fault locations and their activity, which are needed to design a modification of the dam (Maguire, 2019a, b). The scope of this project includes detailed geology of the existing Scoggins Dam site, Henry Hagg Lake, the reservoir behind the dam, and Scoggins Valley downstream of the existing dam, particularly around a potential new dam site, where Scoggins Creek cuts through a narrow gap formed by a resistant felsic tuff bed that crosses the valley.

Oregon

Ecological effects on streams from forest fertilization: Literature review and conceptual framework for future study in the western Cascades

Fertilization of forests with urea-nitrogen has been studied numerous times for its effects on water quality. Stream nitrogen concentrations following fertilization are typically elevated during winter, including peaks in the tens-of-thousands of parts per billion range, with summer concentrations often returning to background or near-background levels. Despite these increases, water-quality criteria for nitrogen have rarely been exceeded. However, such criteria are targeted at fish toxicity or human health and are not relevant to concentrations that could cause ecological disturbances. Studies of the responses of stream biota to fertilization have been rare and have targeted either immediate, toxicity-based responses or used methods insensitive to ongoing ecological processes. This report reviews water-quality studies following forest fertilizations, emphasizing Cascade streams in the Pacific Northwest and documented biological responses in those streams. A conceptual model predicting potential ecological response to fertilization, which includes effects on algal growth and primary production, is presented. In this model, applied fertilizer nitrogen reaching streams is mostly exported during winter. However, some nitrogen retained in soils or stream and riparian areas may become available to aquatic biota during spring and summer. Biological responses may be minimal in small streams nearest to application because of light limitation, but may be elevated downstream where light is sufficient to allow algal growth. Ultimately, algal response could be greatest in downstream reaches, although ambient nutrient concentrations remain low due to uptake and benthic nutrient recycling. Ground-water flow paths and hyporheic processing could be critical in determining the fate of applied nitrogen. A framework is provided for testing this response in the Little River watershed, a tributary to the North Umpqua River, Oregon, at basic and intensive levels of investigation.

Oregon