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The value of electronic tagging and tracking studies for understanding fish–hypoxia interactions

Objective Hypoxia (i.e., low dissolved oxygen availability) is a natural phenomenon but can also be induced by human activities (e.g., nutrient enrichment from runoff). Given that dissolved oxygen is essential for aquatic life, periods of hypoxia tend to have negative consequences (e.g., sublethal disturbances, mortality) for most fishes. Extensive laboratory research has documented hypoxia thresholds and physiological and behavioral outcomes for a variety of freshwater and marine fishes and there is also an extensive body of fieldwork assessing population-level responses (e.g., survival, distribution). Yet, studying how individual fish respond to hypoxia in the wild has proved challenging; electronic tagging and tracking tools (e.g., biotelemetry, biologging) have made it easier to study individual responses to hypoxia and complement other tools like hydroacoustics that tend to focus on population-level responses. Methods We review what has been learned from contemporary studies that employ electronic tagging and tracking tools to understand how fish respond to hypoxia in the wild. Topics explored include identifying and validating hypoxia thresholds, habitat compression, connectivity, mortality, physiological and bioenergetic consequences, and extreme weather conditions. We also consider what we have learned about evaluating various management plans for hypoxia and reflect on how electronic tags have also been used in aquaculture systems and in hybrid studies that combine laboratory and field research. We highlight fishes in Lake Erie as a research narrative to demonstrate how electronic tagging and tracking have markedly improved our understanding of a longstanding hypoxia issue. Results Our synthesis revealed that electronic tagging and tracking have provided critical information on how fish respond to hypoxia in the field, revealing complex trade-offs and compensatory mechanisms as well as cryptic hypoxia-induced mortality. Beyond just illuminating space use and mortality, tags equipped with various sensors are revealing how fish deal with hypoxia in real time in terms of physiology, bioenergetics, and behavior. Conclusions As electronic tagging and tracking methods experience further innovation and are increasingly applied to understand the effects of hypoxia on fish, we expect more unanticipated findings about the effects of hypoxia on fish in all aquatic ecosystems, which will strengthen our ability to manage and mitigate hypoxia. Combining tools and approaches (e.g., lab and field) is perhaps the best way to generate comprehensive understanding.

Transactions of the American Fisheries Society

Carbonatite-hosted residual REE deposits

Rare earth elements (REEs) occur in magmatic rocks but are especially enriched in carbonatite and alkaline silicates. If these rocks are chemically weathered, then the REEs may become further enriched within the regolith developed from these rocks. Primary magmatic REE minerals, as well as the various carbonate minerals and apatite, provide the REEs which, under pervasive chemical weathering, are incorporated within low-temperature REE minerals forming within the regolith. Many of these minerals, as well as their textures, are characteristic of this mode of formation. Lateritic conditions of weathering are instrumental in producing a thick, weathered, or regolith, profile, and the roles of sulfide oxidation, fluctuating groundwater tables, and downward mass wasting due to carbonate dissolution are identified as the most important controls on REE enrichment in the regolith.

Book chapter

USGS Geochron Database

Introduction Geochronology helps us understand Earth’s history by determining when important events, like volcanic eruptions, the rise of mountains, the formation of mineral resources, and changes in the landscape, happened. Geochronological data directly support geologic mapping and can inform decisions about geologic hazard mitigation, natural resource management, and infrastructure resilience. The U.S. Geological Survey (USGS) Geochron database provides access to more than 300,000 published, publicly available age measurements from more than 40,000 geological samples. This database is the result of a collaborative effort with State geological surveys and geoscientists from across the globe. The USGS Geochron database is the most comprehensive collection of geochronological data available for the United States. Users can view data through an interactive map explorer, download datasets, and integrate data into geospatial software or other analysis tools.

Fact Sheet

The 3D Elevation Program—Supporting Ohio's economy

Introduction High-quality elevation data are proving to be a resource of great economic value in dealing with many important issues in Ohio. Current and accurate high-resolution elevation data support flood risk management, water quantity and quality assessment, precision farming, conservation planning, impervious-surface modeling, forest and other natural resources management, abandoned mine and geologic hazard assessment, karst mapping, and siting of wellhead pads for horizontal drilling. These data also support coastal zone management, traffic safety and preliminary engineering site-selection studies for transportation infrastructure, solar potential and other renewable energy planning, aviation safety, and identification of features of interest or concern such as archaeological sites and orphan oil and gas wells. Critical applications that meet the State’s management needs depend on light detection and ranging (lidar) data that provide a highly detailed three-dimensional (3D) model of the Earth’s surface and aboveground features.

Ohio

Neutron activation analysis in hydrology

Neutron activation analysis in hydrogeochemical and related investigations is increasingly practical because of developments in radiation detectors and computerized data processing. While neutron activation is the most widely used kind of activation analysis other kinds (for example, charged particle activation) are available for special applications. Neutron activation analysis is promising because approximately 70 percent of the elements in the periodic table are detected with satisfactory sensitivity, contamination from reagents is eliminated, simultaneous determination of more than 20 elements is often possible, technique is versatile, is applicable to small samples and is non-destructive in the instrumental form. Developments in theU.S. Geological Survey include a special sampling technique for water; a comprehensive technique using carriers precipitated with sulfide to concentrate desired trace elements; a determination of mercury, silver, and gold; determination of aluminum, vanadium and nine other elements; determinations of two groups of rare earth elements; and adaptations of the analytical methods to sediment and biota.

Open-File Report

Explosive trachyte eruptions from the Al Efairia volcanic center in northern Harrat Rahat, Kingdom of Saudi Arabia

Harrat Rahat is an alkali basalt, continental, intraplate volcanic field located within the central-western part of the Kingdom of Saudi Arabia. The northern quarter of Harrat Rahat contains evolved volcanic products that achieve trachyte compositions (>60 weight percent SiO 2 ). Within the Al Efairia volcanic center, pyroclastic-flow and -surge deposits that reflect explosive trachyte volcanism (and minor exposed lava domes that reflect effusive trachyte eruptions) sit at the surface as the youngest expression of volcanic activity within this part of the Harrat Rahat volcanic field. Five trachyte deposits emplaced explosively have been identified within the Al Efairia volcanic center based on geologic mapping, petrography, geochemistry, and paleomagnetism. These units are the trachytes of Um Rgaibah, Gura 5, Gura 4, Al Efairia, and Al Qayf, in descending stratigraphic order. Here, we present 14 40 Ar/ 39 Ar analyses from four of these units, which yield eruption ages of 4.2±5.2 thousand years (ka) for the trachyte of Um Rgaibah, 79.7±1.6 ka for the trachyte of Gura 5, 84.3±1.6 ka for the trachyte of Gura 4, and 88.0±1.8 ka for the trachyte of Al Efairia. The eruption age of the trachyte of Al Qayf has been constrained to between 410.3±3.4 and 418.8±1.9 ka using paleomagnetic correlations and 40 Ar/ 39 Ar ages from overlying and underlying intermediate composition lava flows. Most of these trachytes have distinct geochemical compositions, petrographic characteristics, and directions of remanent magnetization. The exceptions are for the trachytes of Gura 4 and Gura 5, which overlap in their geochemical, petrographic, paleomagnetic, and geochronologic affinities. Based on these similarities, we interpret the trachytes of Gura 4 and Gura 5 to have erupted during a closely spaced (a few decades) time interval from the same magma batch but from craters that are >2 kilometers (km) apart. The eruption of the trachyte of Al Efairia at 88.0±1.8 ka is the result of a different magma batch that erupted a few thousand years prior to the trachytes of Gura 4 and Gura 5. The Al Efairia volcanic center is remarkably different from the Matan volcanic center located ~10 km to the north, which has also erupted young (<150 ka) trachytes. The Matan volcanic center has been shown to produce trachyte compositions only after eruption of basalt followed by intermediate lava flows, whereas only trachyte compositions have erupted within the Al Efairia volcanic center over this same time interval.

Al Efairia volcanic center, Harrat Rahat

Gravity and magnetic surveys of the Skaergaard intrusion, East Greenland

Aeromagnetic and gravity surveys of the Skaergaard intrusion in East Greenland were carried out in July–August 1971 as part of a grant to the University of Oregon Center for Volcanology to refine the models of crystallization and differentiation of the intrusion, specifically to test whether the intrusion is underlain by dense rocks of a reservoir 20 kilometers (km) thick (referred to as a “hidden zone”). The Skaergaard intrusion is a source of platinum group elements that are critical mineral resources for many technologies, and because no new data have been collected these legacy datasets remain a valuable asset. The total-intensity aeromagnetic survey was flown in early July 1971 with a proton precession magnetometer at a constant barometric altitude of 1.5 km (5,000 feet) with a nominal line spacing of 1 km. Two gravimeters were used to acquire 168 stations of which 86 were at known altitudes (mainly sea level) and 82 had altitudes measured by altimetry in late July–August 1971. Finally, a north-south ground vertical-intensity magnetic traverse was completed across the intrusion together with collection of oriented hand specimens. The hand specimens were measured for remnant magnetization and density, along with density measurements of more specimens collected by expedition geologists for other purposes. The intrusion is composed of layered gabbro with extensive crystal fractionation that is dense and strongly reversely polarized. After terrain correction and standard Bouguer gravity reduction, the gravity anomaly dataset was corrected for all rock above sea level using the density measurements of the various zones of the intrusion and the topographic and geologic maps (variable density Bouguer gravity reduction). A large regional gradient in the gravity anomaly data was removed using orthogonal polynomial fitting to the gridded data. The zonal volumes of rock below sea level were calculated from the dipping polygonal layer gravity model of the intrusion below sea level and combined with elliptic cross–section cylinders for the various zones above sea level to approximate the original zonal volumes of the intrusion. The residual gravity anomaly of 18–20 milligals (mGal) was only about half of the expected anomaly if a large hidden zone proposed from petrologic considerations were present, and both two-dimensional and three-dimensional models imply that the exposed series of intrusion zones explain the gravity anomaly by their down-dip extension below sea level together with a small hidden-zone volume. A three-dimensional model of the exposed rocks and their down-dip extension below sea level also can account for the aeromagnetic anomaly with little or no requirement for hidden-zone rock. The middle and upper zone units of the intrusion contain the most magnetite and account for most of the aeromagnetic anomaly.

Skaergaard intrusion

Estimating the hypothetical endowment of critical minerals and other commodities in porphyry copper mine waste in the Four Corners states, USA

Society is fundamentally dependent upon commodities that are used in end-use products for the aerospace, defense, energy, telecommunication, and transportation sectors, resulting in centuries of mining to supply these commodities and materials. Waste from these mining operations can remain on the landscape indefinitely, but there is a lack of national understanding of the distribution and scale of such waste features. The renewable energy transition will continue to increase demand for critical minerals and will result in increasing volumes of mine waste on the Earth’s surface. Reprocessing mine waste can reduce environmental risks and recover needed commodities to match growing demand for societal growth. Therefore, understanding the approximate abundance of commodities that may be available for recovery within mine waste features can be an important piece of domestic critical mineral supply.

Arizona, Colorado, New Mexico, Utah

Open-source gravity reduction workflows for geothermal resource assessment

Potential-field geophysical data such as gravity can enhance understanding of geothermal resources at all stages of the resource life cycle, including assessment, exploration, development, and monitoring, and at multiple scales, from the reservoir scale to regional scale. However, to make gravity data useful for geothermal resource characterization, several processing steps are required to isolate the effects of density variations in the Earth’s crust to enable the identification of structural features associated with geothermal resources. Although this process is well-established, standard computational implementations for processing gravity data that are FAIR (Findable, Accessible, Interoperable, and Reproduceable) are still lacking. This paper details ongoing efforts at the U.S. Geological Survey (USGS) to develop a standard set of open-source Python tools for gravity data reduction that align with the FAIR principles. This workflow makes use of existing open-source tools for geophysical data processing with the goal of maximizing opportunities for rapid improvements, interoperability, and adaptability to other types of geophysical data.

Conference Paper

U.S. Geological Survey—Department of the Interior, Region 11, Alaska—2023–24 biennial science report

Introduction U.S. Geological Survey (USGS) Mission—The USGS national mission is to monitor, analyze, and predict the current and evolving dynamics of complex human and natural Earth-system interactions and to deliver actionable information at scales and timeframes relevant to decision makers. Consistent with the national mission, the USGS in Alaska provides timely and objective scientific information to help address issues and inform management decisions across five interconnected focus areas: Energy and Minerals; Geospatial Mapping; Natural Hazards; Water Quality, Streamflow, and Ice Dynamics; and Ecosystems. The USGS in Alaska consists of approximately 350 scientists and support staff working in 3 Alaska-based science centers. USGS science activities are also initiated by the Cooperative Research Unit and USGS centers outside Alaska. In the last 5 years, USGS research in Alaska has produced many scientific benefits resulting from more than 900 publications. Publications relevant to Alaska can be conveniently searched by keyword through the USGS Publications Warehouse at https://pubs.usgs.gov/.

Alaska

The Great Lakes Geologic Mapping Coalition—Working collaboratively to understand the geology of the Great Lakes Region

Introduction The Great Lakes Geologic Mapping Coalition (GLGMC), commonly referred to as the “Coalition,” is a partnership between the U.S. Geological Survey (USGS), the U.S. States of Illinois, Indiana, Michigan, Minnesota, New York, Ohio, Pennsylvania, and Wisconsin and the Canadian province of Ontario. The member States receive funding for geologic mapping work from the USGS National Cooperative Geologic Mapping Program (NCGMP), whereas Ontario participates as a nonfunded partner. The mission of the GLGMC is to produce three-dimensional (3D) geologic maps that depict unconsolidated sediments and near-surface bedrock in the Great Lakes region of North America. Geologic maps are the basis of most earth science investigations and help support resource exploration (energy, minerals, groundwater), natural hazard mitigation, infrastructure development, and land-use planning, all of which can be used to advance economic development and strengthen national security in the Great Lakes region. During the last few million years, the Great Lakes region has experienced repeated glacial advances and retreats, leaving behind extensive sediments, abundant natural resources, and widespread effects on the underlying bedrock geology (Swezey and others, 2022). Linked by shared histories of past glaciations, industrial agriculture, and legacy automotive, coal, steel, and manufacturing industries, the GLGMC member States collaborate to improve the understanding of the 3D distribution of the sediments overlying the region’s bedrock (fig. 1). Developing a comprehensive subsurface 3D framework of this glaciated terrain can provide earth science data to policymakers at all levels. These insights facilitate informed decisions on the exploration, use, and protection of vital resources, such as critical minerals, industrial materials, and aquifers, thereby supporting economic prosperity and the well-being of the citizens of this region. Since its inception in 1998, the Coalition has completed more than 100 geologic mapping projects across the Great Lakes region. Each project aims to deliver geologic maps, 3D datasets, and other information that improves understanding of the geology of the Great Lakes region, with an emphasis on economic and water resources. Key deliverables include 3D geologic maps and models typically portraying sediment thickness, often derived from top-of-bedrock and borehole data. These products are developed through a combination of fieldwork, subsurface modeling, and the collection and analysis of rock and sediment cores. To support Coalition goals, member States collaborate with scientists working on related STATEMAP, EDMAP, and FEDMAP projects. Coalition scientists also engage with Tribal Nations in the Great Lakes region to ensure that Tribal interests pertaining to Coalition work are addressed. Through this collaboration, the Coalition unites the efforts of State, Federal, and Tribal Nation stakeholders to advance geologic data production and enhance understanding of the geologic resources of the Great Lakes region.

Illinois, Indiana, Michigan, Minnesota, New York,

Wave propagation in layered soil deposits

Recent advances in the general theory of viscoelastic waves and rays in layered media provide a rigorous mathematical framework for site-specific, soil-response models used for earthquake resistant design. The advances provide general closed-form anelastic solutions for the classic problems of the response of a stack of soil layers to S and P waves, ray theory for reflected and refracted waves, Rayleigh- and Love-Type surface waves, and head waves. These general solutions valid for anelastic media regardless of the amount of material damping yield new insights regarding the characteristics of seismic waves and their ray paths that are not provided by conventional models. They provide corresponding numerical ground-response models and ray-tracing computation algorithms that account for changes in velocity and attenuation of anelastic waves associated with changes in inhomogeneity of the waves induced by anelastic soil and soil-rock boundaries. These anelastic effects manifest themselves as variations in amplitude response, amplitude attenuation, raypath location, and travel time as observed at the Earth’s surface. Implications of these anelastic effects for soil-response models used for earthquake resistant design are provided herein.

Conference Paper

Zircon as a pathfinder to REE mineralization

Carbonatites and alkaline silicate rocks are major primary sources of the rare earth elements (REE) and other critical metals, such as Nb. Despite the economic significance of these rocks, their formation and the processes of REE enrichment are poorly understood. Here, statistical analysis of a global dataset demonstrates that zircon geochemistry is a powerful recorder of REE metallogenesis and a potential pathfinder for REE deposits. Zircons from REE and Nb fertile intrusions lack Eu anomalies and have elevated Gd/Yb and Th/Yb, indicating they crystallised from magmas that originated from deep, oxidised and enriched mantle sources. Complexes with Nb enrichment have low U/Nb, reflecting an enriched mantle source, whereas high U/Nb in REE-only fertile intrusions suggest a subduction-metasomatised mantle source. Machine learning models demonstrate high accuracy in classifying zircon from barren and fertile deposits. Classification of detrital zircons shows that REE-enriched deposits correlate with supercontinent assembly, whereas Nb fertile complexes are associated with supercontinent breakup. This approach offers a new, mineral to global scale, petrologic and exploration tool that enhances understanding of REE metallogenesis.

Geochemical Perspectives Letters

Earthquake probabilities and hazards in the U.S. Pacific Northwest

Earthquakes and their cascading consequences pose a significant threat to the people, environment, infrastructure, and economy of the U.S. Pacific Northwest. The Pacific Northwest is susceptible to three types of earthquakes: deep (intraslab) earthquakes, subduction zone (megathrust) earthquakes, and shallow crustal earthquakes. For each of these earthquake types, earth scientists can use a variety of methods to estimate the probability of occurrence for future events, which constrains seismic hazard and informs building codes. The timing of past earthquakes indicates that there is an 85-percent chance of a magnitude 6.5 or greater deep earthquake in the Puget Sound region; a 10-15-percent chance of an approximately magnitude 9 earthquake on the Cascadia Subduction Zone; and a 17-percent chance of a magnitude 6.5 or greater crustal fault earthquake in the Puget Sound region in the next 50 years. Individuals and communities can take simple steps to prepare for and reduce the impact of future earthquakes.

California, Oregon, Washington

Stories in stone: The geoheritage significance of U.S. National Park Service stratotypes

The U.S. National Park Service stratotype inventory has systematically documented hundreds of published stratotypes across the country that represent a quintessential component of America’s geoheritage and possess significant scientific, educational, cultural, historic, and aesthetic values. As valuable geologic reference standards, stratotypes record intervals of Earth history relating to our nation’s unique geologic evolution, biological progression, cultural traditions, historical narratives, and stunning landforms. However, the general lack of awareness and knowledge regarding the scope, significance, distribution, and scale of stratotypes can result in these resources being overlooked. Consequently, stratotypes may inadvertently experience accidental alteration, damage, or destruction through both natural and anthropogenic processes. As with many American geoheritage sites, stratotypes lack specific recognition through legislation, policies, or other management strategies to ensure their preservation and protection. Through education and outreach, we hope to inform, increase awareness, and engage the public about these internationally and nationally significant geologic reference sites, unite various geoheritage communities, and promote their preservation for future generations.

Geoheritage

Airborne geophysical efforts for critical mineral systems mapping in the southern Midcontinent, USA

The increasing global demand for critical minerals to support energy and technological advancement has accelerated exploration and research efforts for these essential resources. Since 2019, the United States Geological Survey (USGS) Earth Mapping Resources Initiative (EMRI) has worked to modernize geologic mapping of the Nation to better understand its critical mineral resources. To further this initiative, the USGS has flown a series of high-resolution airborne magnetic and radiometric surveys over large areas of the southern Midcontinent. The surveys cover known critical mineral deposits and areas with the potential to host additional critical minerals based on the presence of one or more overlapping mineral systems. One aspect of EMRI emphasizes close collaboration between the USGS and the Association of American State Geologists, as well as other government and industry partners to leverage geophysical, geological, and geochemical expertise on both regional and local scales. The EMRI high-resolution airborne survey data provide new insights into the geophysical framework of the southern Midcontinent and its critical mineral endowment. Additionally, discoveries made from the data have directed new studies for critical mineral exploration.

southern Midcontinent

Divisions of geologic time—Major chronostratigraphic and geochronologic units

Introduction The reports and maps of our Nation’s geological surveys inform and benefit the public, private industry, government officials, and scientists. The use of clear and consistent nomenclature and classifications can improve communication of data and interpretations. Since 1899, the U.S. Geological Survey (USGS) Geologic Names Committee (GNC) has been responsible for defining standards that promote uniform geologic nomenclature and classifications among geoscientists. The GNC periodically publishes a geologic time scale, the “Divisions of Geologic Time,” that serves as the national standard for USGS publications (for example, refer to Orndorff and others, 2023). Authors may use other published geologic time scales, such as those of the Geological Society of America (GSA) or the International Commission on Stratigraphy (ICS), provided that they are clearly specified and referenced. Access to the USGS, GSA, and ICS geologic time scales is also available from the U.S. Geologic Names Lexicon (Geolex) website https://ngmdb.usgs.gov/Geolex/stratres/timescales. The geologic time scale serves a dual purpose by enabling authors to distinguish earth material units by position (chronostratigraphic) and time (geochronologic), as outlined in order of decreasing rank.

Fact Sheet

GST-1: A high-resolution global sediment thickness model

Global Sediment Thickness 1 (GST-1) is a high-resolution sedimentary thickness model calculated on a 0.125° x 0.125° grid. It modifies the sediment thickness of the 1° x 1° Earth Crustal Model 1 (ECM1) by means of 3D inversions of free air gravity anomalies. GST-1 is calculated by performing structural inversions on high-density contrasts across two crustal boundaries: the sediment – basement interface and the crystalline crust – upper mantle interface. The inversions are calculated in each of ten overlapping 3D models that span the globe. These ten models are merged to obtain the GST-1 global model, providing an eight-fold increase in lateral spatial resolution in comparison with ECM1 and CRUST 1.0. Our sediment thickness model exploits the nearly continuous sampling of gravity data when compared to the irregular, sparse sampling of seismic refraction data. Sediment thickness values in GST-1 are in excellent agreement with independently derived cross sections from well-studied sedimentary basins, and within expected resolution limits of seismic refraction data. GST-1 offers a robust, high resolution global model of sedimentary thickness to support studies of sedimentary basins.

Tectonophysics