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At least 253 records · Page 14Linked to original sources
USGS2010

Gene movement and genetic association with regional climate gradients in California valley oak ( Quercus lobata Née) in the face of climate change

Rapid climate change jeopardizes tree populations by shifting current climate zones. To avoid extinction, tree populations must tolerate, adapt, or migrate. Here we investigate geographic patterns of genetic variation in valley oak, Quercus lobata Née, to assess how underlying genetic structure of populations might influence this species’ ability to survive climate change. First, to understand how genetic lineages shape spatial genetic patterns, we examine historical patterns of colonization. Second, we examine the correlation between multivariate nuclear genetic variation and climatic variation. Third, to illustrate how geographic genetic variation could interact with regional patterns of 21st Century climate change, we produce region‐specific bioclimatic distributions of valley oak using Maximum Entropy (MAXENT) models based on downscaled historical (1971–2000) and future (2070–2100) climate grids. Future climatologies are based on a moderate‐high (A2) carbon emission scenario and two different global climate models. Chloroplast markers indicate historical range‐wide connectivity via colonization, especially in the north. Multivariate nuclear genotypes show a strong association with climate variation that provides opportunity for local adaptation to the conditions within their climatic envelope. Comparison of regional current and projected patterns of climate suitability indicates that valley oaks grow in distinctly different climate conditions in different parts of their range. Our models predict widely different regional outcomes from local displacement of a few kilometres to hundreds of kilometres. We conclude that the relative importance of migration, adaptation, and tolerance are likely to vary widely for populations among regions, and that late 21st Century conditions could lead to regional extinctions.

California↗
USGS1989

Duck harvest on public hunting areas in California

We summarized hunter visits and success, and the magnitude and species composition of the duck harvest recorded on California public hunting areas (PHAs) during 1950-87. Hunter visits and harvest increased during 1950-74 as new PHAs were added, then declined concurrently with duck populations. Of six geographic regions, the Sacramento Valley, with numerous PHAs and the largest duck concentrations, accounted for the largest portion of PHA hunter visits (28%) and harvest (35%). Duck population levels, regulations, and hunter numbers affected PHA hunter success. Success was highest during 1955-59 but declined with no consistent trend after 1960. Species vulnerability, abundance, distribution, and hunter preference affected harvest composition. Northern pintails, Anas acuta, averaged 27% of the PHA harvest but declined in importance after 1974. Green-winged teal, A. crecca, the most important species in southern regions, averaged 21% of the PHA harvest. Mallards, A. platyrhynchos, averaged 16% of the PHA harvest but increased in importance after 1974 to become the most common duck bagged after 1983. PHA harvest comprised a small (4-16%) portion of the total state harvest. However, this portion increased from 1950-70 because of increased hunter visits to new PHAs and after 1970 because hunter success on PHAs did not decline as on other areas. PHA hunters tended to harvest fewer preferred species and more vulnerable species, as proportions of total bag, than did other hunters. The continued decline in numbers of waterfowl hunters presents important challenges for management of waterfowl areas in California.

California Fish and Game↗
USGS2014

Correspondence of biological condition models of California streams at statewide and regional scales

We used boosted regression trees (BRT) to model stream biological condition as measured by benthic macroinvertebrate taxonomic completeness, the ratio of observed to expected (O/E) taxa. Models were developed with and without exclusion of rare taxa at a site. BRT models are robust, requiring few assumptions compared with traditional modeling techniques such as multiple linear regression. The BRT models were constructed to provide baseline support to stressor delineation by identifying natural physiographic and human land use gradients affecting stream biological condition statewide and for eight ecological regions within the state, as part of the development of numerical biological objectives for California’s wadeable streams. Regions were defined on the basis of ecological, hydrologic, and jurisdictional factors and roughly corresponded with ecoregions. Physiographic and land use variables were derived from geographic information system coverages. The model for the entire state ( n  = 1,386) identified a composite measure of anthropogenic disturbance (the sum of urban, agricultural, and unmanaged roadside vegetation land cover) within the local watershed as the most important variable, explaining 56 % of the variance in O/E values. Models for individual regions explained between 51 and 84 % of the variance in O/E values. Measures of human disturbance were important in the three coastal regions. In the South Coast and Coastal Chaparral, local watershed measures of urbanization were the most important variables related to biological condition, while in the North Coast the composite measure of human disturbance at the watershed scale was most important. In the two mountain regions, natural gradients were most important, including slope, precipitation, and temperature. The remaining three regions had relatively small sample sizes ( n  ≤ 75 sites) and had models that gave mixed results. Understanding the spatial scale at which land use and land cover affect taxonomic completeness is imperative for sound management. Our results suggest that invertebrate taxonomic completeness is affected by human disturbance at the statewide and regional levels, with some differences among regions in the importance of natural gradients and types of human disturbance. The construction and application of models similar to the ones presented here could be useful in the planning and prioritization of actions for protection and conservation of biodiversity in California streams.

California↗
USGS2001

Habitat evaluation using GIS a case study applied to the San Joaquin Kit Fox

Concern over the fate of plant and animal species throughout the world has accelerated over recent decades. Habitat loss is considered the main culprit in reducing many species' abundance and range, leading to numerous efforts to plan and manage habitat preservation. Our work uses Geographic Information Systems (GIS) data and modeling to define a spatially explicit analysis of habitat value, using the San Joaquin Kit Fox (Vulpes macrotis mutica) of California (USA) as an example. Over the last 30 years, many field studies and surveys have enhanced our knowledge of the life history, behavior, and needs of the kit fox, which has been proposed as an umbrella or indicator species for grassland habitat in the San Joaquin Valley of California. There has yet been no attempt to convert much of this field knowledge into a model of spatial habitat value useful for planning purposes. This is a significant omission given the importance and visibility of the imperiled kit fox and increasing trends toward spatially explicit modeling and planning. In this paper we apply data from northern California to derive a small-cell GIS raster of habitat value for the kit fox that incorporates both intrinsic habitat quality and neighborhood context, as well the effects of barriers such as roads. Such a product is a useful basis for assessing the presence and amounts of good (and poor) quality habitat and for eventually constructing GIS representations of viable animal territories that could be included in future reserves. ?? 2001 Elsevier Science B.V.

Landscape and Urban Planning↗
USGS2003

Genetic variation among interconnected populations of Catostomus occidentalis: Implications for distinguishing impacts of contaminants from biogeographical structuring

Exposure to contaminants can affect survivorship, recruitment, reproductive success, mutation rates and migration, and may play a significant role in the partitioning of genetic variation among exposed and nonexposed populations. However, the application of molecular population genetic data to evaluate such influences has been uncommon and often flawed. We tested whether patterns of genetic variation among native fish populations (Sacramento sucker, Catostomus occidentalis) in the Central Valley of California were consistent with long-term pesticide exposure history, or primarily with expectations based on biogeography. Field sampling was designed to rigorously test for both geographical and contamination influences. Fine-scale structure of these interconnected populations was detected with both amplified fragment length polymorphisms (AFLP) and microsatellite markers, and patterns of variation elucidated by the two marker systems were highly concordant. Analyses indicated that biogeographical hypotheses described the data set better than hypotheses relating to common historical pesticide exposure. Downstream populations had higher genetic diversity than upstream populations, regardless of exposure history, and genetic distances showed that populations from the same river system tended to cluster together. Relatedness among populations reflected primarily directions of gene flow, rather than convergence among contaminant-exposed populations. Watershed geography accounted for significant partitioning of genetic variation among populations, whereas contaminant exposure history did not. Genetic patterns indicating contaminant-induced selection, increased mutation rates or recent bottlenecks were weak or absent. We stress the importance of testing contaminant-induced genetic change hypotheses within a biogeographical context. Strategic application of molecular markers for analysis of fine-scale structure, and for evaluating contaminant impacts on gene pools, is discussed.

Molecular Ecology↗
USGS2006

Understanding the genetic effects of recent habitat fragmentation in the context of evolutionary history: Phylogeography and landscape genetics of a southern California endemic Jerusalem cricket (Orthoptera: Stenopelmatidae: Stenopelmatus)

Habitat loss and fragmentation due to urbanization are the most pervasive threats to biodiversity in southern California. Loss of habitat and fragmentation can lower migration rates and genetic connectivity among remaining populations of native species, reducing genetic variability and increasing extinction risk. However, it may be difficult to separate the effects of recent anthropogenic fragmentation from the genetic signature of prehistoric fragmentation due to previous natural geological and climatic changes. To address these challenges, we examined the phylogenetic and population genetic structure of a flightless insect endemic to cismontane southern California, Stenopelmatus 'mahogani' (Orthoptera: Stenopelmatidae). Analyses of mitochondrial DNA sequence data suggest that diversification across southern California began during the Pleistocene, with most haplotypes currently restricted to a single population. Patterns of genetic divergence correlate with contemporary urbanization, even after correcting for (geographical information system) GIS-based reconstructions of fragmentation during the Pleistocene. Theoretical simulations confirm that contemporary patterns of genetic structure could be produced by recent urban fragmentation using biologically reasonable assumptions about model parameters. Diversity within populations was positively correlated with current fragment size, but not prehistoric fragment size, suggesting that the effects of increased drift following anthropogenic fragmentation are already being seen. Loss of genetic connectivity and diversity can hinder a population's ability to adapt to ecological perturbations commonly associated with urbanization, such as habitat degradation, climatic changes and introduced species. Consequently, our results underscore the importance of preserving and restoring landscape connectivity for long-term persistence of low vagility native species. Journal compilation ?? 2006 Blackwell Publishing Ltd.

Molecular Ecology↗
USGS2006

Seaside, Oregon, Tsunami Pilot Study— Modernization of FEMA flood hazard maps: GIS data

Introduction: The Federal Emergency Management Agency (FEMA) Federal Insurance Rate Map (FIRM) guidelines do not currently exist for conducting and incorporating tsunami hazard assessments that reflect the substantial advances in tsunami research achieved in the last two decades; this conclusion is the result of two FEMA-sponsored workshops and the associated Tsunami Focused Study (Chowdhury and others, 2005). Therefore, as part of FEMA's Map Modernization Program, a Tsunami Pilot Study was carried out in the Seaside/Gearhart, Oregon, area to develop an improved Probabilistic Tsunami Hazard Analysis (PTHA) methodology and to provide recommendations for improved tsunami hazard assessment guidelines (Tsunami Pilot Study Working Group, 2006). The Seaside area was chosen because it is typical of many coastal communities in the section of the Pacific Coast from Cape Mendocino to the Strait of Juan de Fuca, and because State agencies and local stakeholders expressed considerable interest in mapping the tsunami threat to this area. The study was an interagency effort by FEMA, U.S. Geological Survey, and the National Oceanic and Atmospheric Administration (NOAA), in collaboration with the University of Southern California, Middle East Technical University, Portland State University, Horning Geoscience, Northwest Hydraulics Consultants, and the Oregon Department of Geological and Mineral Industries. We present the spatial (geographic information system, GIS) data from the pilot study in standard GIS formats and provide files for visualization in Google Earth, a global map viewer.

Oregon↗
USGS2009

U.S. Geological Survey (USGS) Western Region: Coastal and Ocean Science

USGS Western Region Coastal and Ocean Science is interdisciplinary, collaborative, and integrates expertise from all USGS Disciplines, and ten of its major Science Centers, in Alaska, Hawai'i, California, Washington, and Oregon. The scientific talent, laboratories, and research vessels in the Western Region and across the Nation, strategically position the USGS to address broad geographic and oceanographic research topics. USGS information products inform resource managers and policy makers who must balance conservation mandates with increasing demands for resources that sustain the Nation's economy. This fact sheet describes but a few examples of the breadth of USGS science conducted in coastal, nearshore, and ocean environments along our Nation's West Coast and Pacific Islands.

Fact Sheet↗
USGS1995

Watershed characterization for precipitation-runoff modeling system, north fork, American River and east fork, Carson River watersheds, California

As part of its Global Change Hydrology Program, the U.S. Geological Survey (USGS) is investigating the potential effects of climate change on the water resources of several river basins in the United States. The American River Basin in California represents the windward slope of the north-central Sierra Nevada, and the California part of the Carson River Basin, most of which is in Nevada, represents the leeward slope. Parts of the American River and Carson River Basins—the North Fork American River and East Fork Carson River watersheds, both in California—were studied to determine the sensitivity of water resources to potential climate change. The water resources of both basins are derived primarily from snowmelt. A geographic information system (GIS) data base has been created to facilitate paired-basin analysis. The GIS data base incorporates (1) land-surface data, which include elevation, land use and land cover, soil type, and geology; (2) hydrologic data, such as stream networks and streamflow-gaging stations; and (3) climatic data, such as snow-course, snow-telemetry, radiosonde, and meteorological data. Precipitation-runoff models were developed and calibrated for the North Fork watershed within the American River Basin and for the East Fork watershed within the Carson River Basin. (These watersheds were selected to represent the climatic and physiographic variability of the two larger basins.) Synthesized climate scenarios then were used in the model to predict potential effects of climate change.

Hydrologic Atlas↗
USGS1998

MAS/MILS Arc/Info point coverage for the western U.S. (excluding Hawaii)

The U.S. Geological Survey has two international and one regional digital database that contains information on mineral properties. This report describes the conversion of selected data from one of the international databases - MAS/MILS (Mineral Availability System/Mineral Industry Location System) - into a spatial data product. The MAS/MILS database, obtained from the U.S. Bureau of Mines (USBM) upon its closure, contains over 221,000 records of mineral properties and processing facilities throughout the world. However, the majority of the records in the database are of sites located in the western U.S. This is due to the extensive mineral activity that has occurred in the West, and the work done by mineral professionals in the Western, Alaska, and Intermountain Field Operations Centers of the USBM. The purpose of this project was to create a spatial coverage of the western U.S. containing mineral resource information. This coverage includes information for the states of Alaska, Arizona, California, Colorado, Idaho, Montana, Nevada, New Mexico, Oregon, Utah, Washington, and Wyoming. For this report, locations from MAS/MILS were converted to a point coverage using a geographic information system (GIS). All work was done using Arc/Info v. 7.0.4. There are 128,441 points in the coverage.

Alaska, Arizona, California, Colorado, Idaho, Mont↗
USGS1975

Usefulness of LANDSAT data for monitoring plant development and range conditions in California's annual grassland

A network of sampling sites throughout the annual grassland region of California was established to correlate plant growth stages and forage production to climatic and other environmental factors. Plant growth and range conditions were further related to geographic location and seasonal variations. A sequence of LANDSAT data was obtained covering critical periods in the growth cycle. This was analyzed by both photointerpretation and computer aided techniques. Image characteristics and spectral reflectance data were then related to forage production, range condition, range site and changing growth conditions. It was determined that repeat sequences with LANDSAT color composite images do provide a means for monitoring changes in range condition. Spectral radiance data obtained from magnetic tape can be used to determine quantitatively the critical stages in the forage growth cycle. A computer ratioing technique provided a sensitive indicator of changes in growth stages and an indication of the relative differences in forage production between range sites.

California↗
USGS2012

Housing arrangement and location determine the likelihood of housing loss due to wildfire

Surging wildfires across the globe are contributing to escalating residential losses and have major social, economic, and ecological consequences. The highest losses in the U.S. occur in southern California, where nearly 1000 homes per year have been destroyed by wildfires since 2000. Wildfire risk reduction efforts focus primarily on fuel reduction and, to a lesser degree, on house characteristics and homeowner responsibility. However, the extent to which land use planning could alleviate wildfire risk has been largely missing from the debate despite large numbers of homes being placed in the most hazardous parts of the landscape. Our goal was to examine how housing location and arrangement affects the likelihood that a home will be lost when a wildfire occurs. We developed an extensive geographic dataset of structure locations, including more than 5500 structures that were destroyed or damaged by wildfire since 2001, and identified the main contributors to property loss in two extensive, fire-prone regions in southern California. The arrangement and location of structures strongly affected their susceptibility to wildfire, with property loss most likely at low to intermediate structure densities and in areas with a history of frequent fire. Rates of structure loss were higher when structures were surrounded by wildland vegetation, but were generally higher in herbaceous fuel types than in higher fuel-volume woody types. Empirically based maps developed using housing pattern and location performed better in distinguishing hazardous from non-hazardous areas than maps based on fuel distribution. The strong importance of housing arrangement and location indicate that land use planning may be a critical tool for reducing fire risk, but it will require reliable delineations of the most hazardous locations.

California↗
USGS2006

Status and trends in demography of northern spotted owls, 1985-2003

We analyzed demographic data from northern spotted owls (Strix occidentalis caurina) from 14 study areas in Washington, Oregon, and California for 1985-2003. The purpose of our analyses was to provide an assessment of the status and trends of northern spotted owl populations throughout most of their geographic range. The 14 study areas made up approximately 12% of the range of the subspecies and included federal, tribal, private, and mixed federal and private lands. The study areas also included all the major forest types that the subspecies inhabits. The analyses followed rigorous protocols that were developed a priori and were the result of extensive discussions and consensus among the authors. Our primary objectives were to estimate fecundity, apparent survival (??), and annual rate of population change (??) and to determine if there were any temporal trends in these population parameters. In addition to analyses of data from individual study areas, we conducted 2 meta-analyses on each demographic parameter. One meta-analysis was conducted on all 14 areas, and the other was restricted to the 8 areas that constituted the Effectiveness Monitoring Plan for northern spotted owls under the Northwest Forest Plan. The average number of years of reproductive data per study area was 14 (range = 5-19), and the average number of recapture occasions per study area was 13 (range = 4-18). Only 1 study area had <12 years of data. Our results were based on 32,054 captures and resightings of 11,432 banded individuals for estimation of survival and 10,902 instances in which we documented the number of young produced by territorial females. The number of young fledged (NYF) per territorial female was analyzed by testing a suite of a priori models that included (1) effects of age, (2) linear or quadratic time trends, (3) presence of barred owls (Strix varia) in spotted owl territories, and (4) an even-odd year effect. The NYF varied among years on most study areas with a biennial cycle of high reproduction in even-numbered years and low reproduction in odd-numbered years. These cyclic fluctuations did not occur on all study areas, and the even-odd year effect waned during the last 5 years of the study. Fecundity was highest for adults (x??=0.372, SE=0.029), lower for 2-year-olds (x??=0.208, SE=0.032), and very low for 1-year-olds (x??=0.074, SE = 0.029). Fecundity was stable over time for 6 areas (Rainier, Olympic, Warm Springs, H. J. Andrews, Klamath, and Marin), declining for 6 areas (Wenatchee, Cle Elum, Oregon Coast Range, Southern Oregon Cascades, Northwest California, and Simpson), and slightly increasing for 2 areas (Tyee, Hoopa). We found little association between NYF and the proportion of northern spotted owl territories where barred owls were detected, although results were suggestive of a negative effect of barred owls on the Wenatchee and Olympic study areas. The meta-analysis on fecundity indicated substantial annual variability with no increasing or decreasing trends. Fecundity was highest in the mixed-conifer region of eastern Washington (x??=0.560, SE=0.041) and lowest in the Douglas-fir (Pseudotsuga menziesii) region of the Oregon coast (x??=0.306, SE=0.039). We used Cormack-Jolly-Seber open population models and Program MARK to estimate apparent survival rates of owls >1 year old. We found no differences in apparent survival rates between sexes except for 1 area (Marin), which had only 6 years of data. Estimates of apparent survival from individual study areas indicated that there were differences among age classes with adults generally having higher survival than 1- and 2-year-olds. Apparent survival rates ranged from 0.750 (SE=0.026) to 0.886 (SE=0.010) for adults, 0.626 (SE=0.073) to 0.886 (SE=0.010) for 2-year-olds, and 0.415 (SE=0.111) to 0.860 (SE=0.017) for 1-year-olds. These estimates were comparable to survival rates from previous studies on the subspecies. We found evidence for negative time trends in survival rate

Wildlife Monographs↗
USGS2007

The distribution of nuclear genetic variation and historical demography of sea otters

The amount and distribution of population genetic variation is crucial information for the design of effective conservation strategies for endangered species and can also be used to provide inference about demographic processes and patterns of migration. Here, we describe variation at a large number of nuclear genes in sea otters Enhydra lutris ssp. We surveyed 14 variable microsatellite loci and two genes of the major histocompatibility complex (MHC) in up to 350 California sea otters Enhydra lutris nereis , which represents ∼10% of the subspecies' population, and 46 otters from two Alaskan sites. We utilized methods for detecting past reductions in effective population size to examine the effects of near extinction from the fur trade. Summary statistic tests largely failed to find a signal of a recent population size reduction (within the past 200 years), but a Bayesian method found a signal of a strong reduction over a longer time scale (up to 500 years ago). These results indicate that the reduction in size began long enough ago that much genetic variation was lost before the 19th century fur trade. A comparison of geographic distance and pairwise relatedness for individual otters found no evidence of kin-based spatial clustering for either gender. This indicates that there is no population structure, due to extended family groups, within the California population. A survey of population genetic variation found that two of the MHC genes, DQB and DRB, had two alleles present and one of the genes, DRA, was monomorphic in otters. This contrasts with other mammals, where they are often the most variable coding genes known. Genetic variation in the sea otter is among the lowest observed for a mammal and raises concerns about the long-term viability of the species, particularly in the face of future environmental changes.

Animal Conservation↗
USGS2014

Late Holocene sedimentary environments of south San Francisco Bay, California, illustrated in gravity cores

Data are reported here from 51 gravity cores collected from the southern part of San Francisco Bay by the U.S. Geological Survey in 1990. The sedimentary record in the cores demonstrates a stable geographic distribution of facies and spans a few thousand years. Carbon-14 dating of the sediments suggests that sedimentation rates average about 1 mm/yr. The geometry of the bay floor and the character of the sediment deposited have remained about the same in the time spanned by the cores. However, the sedimentary record over periods of centuries or decades is likely to be much more variable. Sediments containing a few bivalve shells and bivalve or oyster coquinas are most often found west of the main channel and near the San Mateo Bridge. Elsewhere in the south bay, shells are rare except in the southernmost reaches where scattered gastropod shells are found.

California↗
USGS2017

Greater sage-grouse ( Centrocercus urophasianus ) nesting and brood-rearing microhabitat in Nevada and California—Spatial variation in selection and survival patterns

Greater sage-grouse ( Centrocercus urophasianus ; hereinafter, "sage-grouse") are highly dependent on sagebrush ( Artemisia spp.) dominated vegetation communities for food and cover from predators. Although this species requires the presence of sagebrush shrubs in the overstory, it also inhabits a broad geographic distribution with significant gradients in precipitation and temperature that drive variation in sagebrush ecosystem structure and concomitant shrub understory conditions. Variability in understory conditions across the species’ range may be responsible for the sometimes contradictory findings in the scientific literature describing sage-grouse habitat use and selection during important life history stages, such as nesting. To help understand the importance of this variability and to help guide management actions, we evaluated the nesting and brood-rearing microhabitat factors that influence selection and survival patterns in the Great Basin using a large dataset of microhabitat characteristics from study areas spanning northern Nevada and a portion of northeastern California from 2009 to 2016. The spatial and temporal coverage of the dataset provided a powerful opportunity to evaluate microhabitat factors important to sage-grouse reproduction, while also considering habitat variation associated with different climatic conditions and areas affected by wildfire. The summary statistics for numerous microhabitat factors, and the strength of their association with sage-grouse habitat selection and survival, are provided in this report to support decisions by land managers, policy-makers, and others with the best-available science in a timely manner.

California, Nevada↗
USGS2011

Seasonal variation in nutritional characteristics of the diet of greater white-fronted geese

We studied diet and habitat use of greater white-fronted geese ( Anser albifrons ) from autumn through spring on their primary staging and wintering areas in the Pacific Flyway, 1979–1982. There have been few previous studies of resource use and forage quality of wintering greater white-fronted geese in North America, and as a consequence there has been little empirical support for management practices pertaining to habitat conservation of this broadly distributed species. Observations of >2,500 flocks of geese and collections of foraging birds revealed seasonal and geographic variation in resource use reflective of changes in habitat availability, selection, and fluctuating physiological demands. Autumn migrants from Alaska arrived first in the Klamath Basin of California and southern Oregon, where they fed on barley, oats, wheat, and potatoes. Geese migrated from the Klamath Basin into the Central Valley of California in late autumn where they exploited agricultural crops rich in soluble carbohydrates, with geese in the Sacramento Valley feeding almost exclusively on rice and birds on the Sacramento–San Joaquin Delta primarily utilizing corn. White-fronted geese began their northward migration in late winter, and by early spring most had returned to the Klamath Basin where 37% of flocks were found in fields of new growth cultivated and wild grasses. Cereal grains and potatoes ingested by geese were low in protein (7–14%) and high in soluble nutrients (17–47% neutral detergent fiber [NDF]), whereas grasses were low in available energy (47–49% NDF) but high in protein (26–42%). Greater white-fronted geese are generalist herbivores and can exploit a variety of carbohydrate-rich cultivated crops, likely making these geese less susceptible to winter food shortages than prior to the agriculturalization of the North American landscape. However, agricultural landscapes can be extremely dynamic and may be less predictable in the long-term than the historic environments to which geese are adapted. Thus far greater white-fronted geese have proved resilient to changes in land cover in the Pacific Flyway and by altering their migration regime have even been able to adapt to changes in the availability of suitable forage crops.

Pacific Flyway↗
USGS2025

Speciation genomics in the tiger whiptail lizards ( Aspidoscelis tigris complex)

The transition from small genetic to genome-scale datasets for studying biodiversity has revealed that genetic exchange through introgressive hybridization is a widespread phenomenon in nature. Despite this, a lack of high-quality reference genomes for most non-model species limits our understanding of the impact of this process for many taxonomic groups. This restricts the range of insights that genomic tools can provide for conservation biologists, who often hope to employ genomic datasets to accurately identify historically isolated lineages to protect and to predict their evolutionary fate in the face of environmental change. Tiger whiptail lizards ( Aspidoscelis tigris complex) are an abundant and important ecological component of ecosystems across the southwestern United States. In this study, we assembled and annotated a chromosome-level reference genome for A. t. stejnegeri from coastal California. We then used this reference genome to reconstruct patterns of speciation and admixture within the larger species complex, finding evidence that gene flow is widespread both geographically and across the genome.

northern Mexico, southwestern United States↗