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At least 199 records · Page 11Linked to original sources
USGS2015

Variation in the myosoricine hand skeleton and its implications for locomotory behavior (Eulipotyphla: Soricidae)

Substrate use and locomotory behavior of mammals are typically reflected in external characteristics of the forefeet, such as the relative proportions of the digits and claws. Although skeletal anatomy of the forefeet can be more informative than external characters, skeletons remain rare in systematic collections. This is particularly true for the Myosoricinae (Eulipotyphla: Soricidae), a small clade of African shrews that includes both ambulatory forest shrews ( Myosorex ) and semifossorial mole shrews ( Surdisorex ). Most species in this subfamily have restricted distributions, and their behavior and ecology are mostly unstudied. To better understand the potential range of locomotory behavior among myosoricines, we used digital x-rays to image and facilitate measuring the forefoot skeletons of 9 species. As a gauge of potential variation, we compared them with the ambulatory talpid Uropsilus (Talpidae) and the semifossorial talpid Neurotrichus . The hand morphologies of myosoricines show a graded range of potential substrate use between ambulatory and semifossorial. Some of these shrews exhibit adaptations for increased burrowing efficiency that are similar to those seen in talpids and other mammals, such as longer, broader distal phalanges and claws and shorter, wider metacarpals and proximal and middle phalanges. They also, however, have characteristics that are distinct from talpids, such as maintenance of forefoot asymmetry and an increased emphasis of ray III.

Journal of Mammalogy↗
USGS2012

Evidence of accelerated beak growth associated with avian keratin disorder in black-capped chickadees (Poecile atricapillus)

We recently documented an epizootic of beak deformities in more than 2,000 Black-capped Chickadees ( Poecile atricapillus ) and other wild bird species in North America. This emerging avian disease, which has been termed avian keratin disorder , results in gross overgrowth of the rhamphotheca, the outer, keratinized layer of the beak. To test the hypothesis that the beak deformities characteristic of this disorder are associated with accelerated keratin production, we measured rates of beak growth and wear in affected Black-capped Chickadees ( n =16) and a control sample of unaffected chickadees ( n =14) collected from south-central (61°09′–61°38′N, 149°11′–149°48′W) and interior Alaska (64°51′–64°53′N, 147°49′–147°59′W). Rates of absolute growth were 50–100% higher in affected birds than they were in control birds and exceeded records from other passerine species. These results suggest that abnormally rapid epidermal growth is the primary physical mechanism by which beak deformities develop and are maintained in affected chickadees. Although beak overgrowth typically worsened over time, differential patterns of wear influenced the severity and morphology of deformities. In some cases, the effects of accelerated keratin growth were partially mitigated by frequent breakage of rhamphothecal tips. However, mortalities occurred in 9 of 16 birds (56%) with beak deformities during the study, suggesting that avian keratin disorder results in severe health consequences for affected birds. Additional study of factors that control beak keratin production is needed to understand the pathogenesis of this debilitating disease in wild birds.

Alaska↗
USGS1991

Genotypic and phenotypic variability of Zostera marina on the west coast of North America

The relation between environmental factors and leaf morphology of Zostera marina L. have long been unclear, primarily because the species is intrinsically variable. The common-garden method was used to determine the genetic, environmental, and interaction components of leaf size variation. Zostera marina consists of several ecotypes with a wide range of phenotypic plasticity. Variation in the morphology of Z . marina was of three types: genetic, accounting for 14% across the localities studied; environmental (phenotypic plasticity along temporal and spatial gradients), accounting for 32%; and interaction between genotype and environmental, acounting for 35%. Five ecotypes were described for the North American Pacific coast: Z . marina L. var. izembekensis Backman, Z . marina L. var. typica Setchell, Z . marina L. var. phillipsii Backman, Z . marina L. var. latifolia Morong, Z . marina L. var. atàm Backman. Temporal variation was due to seasonal phenotypic changes in ecotypes. Zostera marina var. izembekensis showed little seasonal morphological changes; Z . marina var. typica demonstrated minor increase in leaf size in spring and summer. Zostera marina var. phillipsii and Z . marina var. latifolia behaved similarly in that leaf size of both increased markedly in spring through early summer. Zostera marina var. phillipsii is adapted to Hood Canal and Puget Sound while Z . marina var. latifolia occupies the outer coast. Zostera marina var. atàm exhibits sexual reproduction exclusively and is specifically adapted to the Gulf of California.

Canadian Journal of Botany↗
USGS2020

Resolving species boundaries in the critically imperiled freshwater mussel species, Fusconaia mitchelli (Bivalvia: Unionidae)

Species are a fundamental unit of biology, and defining accurate species boundaries is integral to effective conservation and management of imperiled taxa. Freshwater mussels (Bivalvia: Unionidae) are among the most imperiled groups of organisms in North America, yet species boundaries remain uncertain for many taxa. The False Spike, Fusconaia mitchelli (Simpson in Dall, 1895), is a freshwater mussel considered to be endemic to central Texas (Brazos, Colorado, and Guadalupe drainages). Recent research revealed significant intraspecific genetic variation between geographically separated populations of F . mitchelli , which could be indicative of speciation; however, small sample sizes for several of the populations precluded formal taxonomic revision. Here, we increase taxon sampling and use multilocus DNA sequence data and traditional morphometrics to re‐evaluate species boundaries in F . mitchelli . We sequenced three loci: the protein‐coding mitochondrial DNA genes cytochrome c oxidase subunit 1 and NADH dehydrogenase 1 , and the nuclear internal transcribed spacer 1 . Phylogenetic analyses depicted deep genetic divergence between F . mitchelli in the Guadalupe and those in the Brazos and Colorado drainages, which was further supported by available biogeographic information. Morphometric analyses and coalescent‐based species delimitation models integrating both DNA sequence and morphological data provided strong support for the divergence observed between the two geographically isolated clades of F . mitchelli . Based on these results, we revise taxonomy accordingly by elevating the junior synonym Fusconaia iheringi (Wright, 1898) to represent the Brazos and Colorado populations and restrict the distribution of F . mitchelli to the Guadalupe River drainage. Our findings may impact pending management decisions to protect F . mitchelli under the U.S. Endangered Species Act.

Journal of Zoological Systematics and Evolutionary↗
USGS2024

Precision of four calcified structures for age estimation of Black Carp

Objective Black Carp Mylopharyngodon piceus is an emerging invasive species in North America with an expanding population in the Mississippi River basin. Current aging methods use a suite of structures for age estimation, and a single structure is needed to minimize processing time, to maximize consistency of age and growth measurements, and to allow for back-calculation of individual fish length at age. Methods In total, 236 Black Carp were collected throughout the year from 2017 to 2019 through incidental captures by commercial fishers and biologists. In a subsample, 119 Black Carp from 429 to 1268 mm total length were compared for the precision of annuli counts by two experienced readers for the two anterior pectoral fin rays, the anterior dorsal fin ray, sectioned vertebrae, and lapilli otoliths based on percent exact agreement (PA), percent agreement within 1 year (PA ± 1), coefficient of variation (CV), and bubble plots. Consensus annuli counts were compared by PA and CV between structures. We applied annuli counts, as opposed to age, as fish were collected during all seasons and structures were examined independently by readers without knowledge of capture date. Result Vertebrae and dorsal rays had the highest PA between readers. Dorsal ray had the lowest CV and higher PA ± 1. Pectoral rays and lapilli otoliths had the lowest PA. Between-structure consensus annuli counts indicated that pectoral rays and the dorsal ray annuli counts were the most similar (PA >70% and CV <12) and lapilli otoliths were the most dissimilar (PA >35% and CV >24). Reader-reported confidence was highest for vertebrae, then in decreasing order, dorsal ray, pectoral rays, and lapilli otoliths. Lumens were present in all fin rays with only minor effects observed on annuli counts, aside from the anterior-most pectoral fin ray, in which lumens obscured the presence of one or more potential annuli in 61% of structures. Conclusion The dorsal ray had the highest agreement between readers, with agreement with ±1 year at 98%; the structure can be efficiently extracted and processed, and the structure's morphology and growth pattern are conducive to aging older fish. Vertebrae had high agreement between readers, but a systematic pattern of double bands in vertebrae increased the between-reader variation in older fish as the interannual growth pattern compressed the viewable area; this was identified by readers based on aging criteria and highlights the need for training novice readers. Validation of annual growth in the tested suite of structures is still needed.

Mississippi River↗
USGS2024

The influence of channel morphology and hydraulic complexity on larval pallid sturgeon (Scaphirhynchus albus) drift and dispersal dynamics in the Fort Peck Segment, Upper Missouri River: Insights from particle tracking simulations

Longitudinal dispersal of migratory fish species can be interrupted by factors that fragment rivers, such as dams and reservoirs with incompatible habitats, and indirect alterations to variables, such as water temperature or turbidity. The endangered pallid sturgeon ( Scaphirhynchus albus ) population in the Upper Missouri River Basin in North Dakota and Montana is an example of such fragmentation and alteration due to the construction of dams. We applied a high-resolution, 2+-dimensional modelling framework composed of hydrodynamic and Lagrangian particle tracking components to simulate pallid sturgeon larval drift and dispersal along a 33-km section of the Upper Missouri River to evaluate three main issues: a comparison between multidimensional models and traditional 1-dimensional models, the sensitivity of hydrodynamics to channel morphology, and the implications of channel morphology on retention and transport-time metrics for larval fish. The results indicate that multidimensional models better represent breakthrough curves of transporting larvae compared to 1-dimensional models, especially for the long tail of slow drifters in the population. Results also indicate that channel morphology and hydraulic complexity play significant roles in larval dispersal with certain flow conditions and channel features increasing larval retention and providing potential management options to increase survival rates by adjusting flow conditions during spawning events. For example, modelling indicates increased retention times at discharges 23–38% daily flow exceedance, coincident with emergence of mid-channel sandbars. Findings additionally emphasize the need for improved understanding of biological factors that affect larval drift and dispersal.

Montana, North Dakota↗
USGS2001

Genetic and morphologic variation in Phyllodoce empetriformis and Phyllodoce glanduliflora (Ericaceae) in Mount Rainier National Park, Washington

Genetic and morphological diversity of Phyllodoce empetriformis (Sw.) D. Don and Phyllodoce glanduliflora (hook.) Cov. were surveyed in Mount Rainier National Park in the Cascade Mountains of Washington State. Paired populations at high and low elevations were sampled at three study areas between 1720- and 2451-m elevation. Allozyme analysis of four polymorphic loci indicates high levels of genetic diversity within populations ( P. empetriformis = 94.2% and P. glanduliflora = 93.4% of total diversity) and significant differences in allele frequencies among populations and study areas. Individual populations are composed of multiple clones with high ratios of local to widespread genotypes. The proportion of distinguishable clones ranges from 32 to 83% within individual populations. Within individual populations, 18-67% of genotypes were restricted to one population. Patterns of morphologic variation, estimated through measurements of leaf width, leaf length, stem extension, and plant height paralleled those displayed by allozyme analysis. Significant differences were found in leaf width and stem length for P. empetriformis and among greenhouse populations for leaf width ( P. empetriformis ) and leaf length ( P. glanduliflora ). Species conservation strategies for Phyllodoce should concentrate on the maintenance of within-population levels of diversity, protection of adjacent populations, and protection of safe sites for recruitment of new populations.

Washington↗
USGS2007

Immunotoxicity of trenbolone acetate in Japanese quail

Trenbolone acetate is a synthetic androgen that is currently used as a growth promoter in many meat-exporting countries. Despite industry laboratories classifying trenbolone as nonteratogenic, data showed that embryonic exposure to this androgenic chemical altered development of the immune system in Japanese quail. Trenbolone is lipophilic, persistent, and released into the environment in manure used as soil fertilizer. This is the first study to date to assess this chemical's immunotoxic effects in an avian species. A one-time injection of trenbolone into yolks was administered to mimic maternal deposition, and subsequent effects on the development and function of the immune system were determined in chicks and adults. Development of the bursa of Fabricius, an organ responsible for development of the humoral arm of the immune system, was disrupted, as indicated by lower masse, and smaller and fewer follicles at day 1 of hatch. Morphological differences in the bursas persisted in adults, although no differences in either two measures of immune function were observed. Total numbers of circulating leukocytes were reduced and heterophil-lymphocyte ratios were elevated in chicks but not adults. This study shows that trenbolone acetate is teratogenic and immunotoxic in Japanese quail, and provides evidence that the quail immune system may be fairly resilient to embryonic endocrine-disrupting chemical-induced alterations following no further exposure posthatch.

Journal of Toxicology and Environmental Health, Pa↗
USGS1999

Efficacy of identifying stocked crappies in a Tennessee reservoir through oxytetracycline marking

Oxytetracycline (OTC) immersion was used to identify black-nosed crappies, a morphological variation of black crappie Pomoxis nigromaculatus , stocked into Normandy Reservoir, Tennessee, during fall 1997. The technique effectively marked 97% of the treated fish. Analysis of one otolith per fish by one reader successfully identified 98% of marked and unmarked fish in a blind test. Marks were formed before annulus formation and were not obscured by annulus-related autofluorescence, suggesting that OTC can be effectively used late in the year (Oct and Nov) in Tennessee.

Tennessee↗
USGS2006

Refined thorium abundances for lunar red spots: Implications for evolved, nonmare volcanism on the Moon

We have used improved knowledge of the spatial distribution of thorium (Th) on the lunar surface, in conjunction with a forward modeling analysis of Lunar Prospector gamma ray data, to estimate the thorium abundances of lunar red spots. The results from this study can be combined with preexisting compositional and morphologic evidence to suggest that Hansteen Alpha, the Gruithuisen domes, and the Lassell massif are silicic, nonmare, volcanic constructs, similar in nature to terrestrial rhyolite domes. We propose that either silicate liquid immiscibility or, more likely, basaltic underplating could have produced lunar rhyolite domes. Thus the Lunar Prospector data presented in this study provide new information about the full range of volcanic and crustal processes that could have occurred on the Moon.

Journal of Geophysical Research E: Planets↗
USGS1976

Revision of the Carboniferous genus Aulina Smith (Coelenterata, Anthozoa)

Morphologic and stratigraphic evidence bearing on the phylogenetic relationships of aulate Carboniferous corals suggests that species previously assigned to the genus Aulina Smith represent at least six different lineages that descended from three different ancestral genera. A classification designed to better reflect phylogenetic relationships includes the new genera Aulokoninckophyllum , Aulostylus , Solenodendron , and Vesiculotubus . The new North American taxa Aulostylus tubiferus tubiferus , A . tubiferus eotubiferus , and A . bamberi are described and illustrated. Two new Chinese species, Aulina ( Pseudoaulina ) loi and A . ( P .) sinensis , are also proposed.

Journal of Research of the U.S. Geological Survey↗
USGS2026

At the edge of change: Native Phragmites persistence and nonnative arrival along the dam-regulated Colorado River

Premise The southwestern United States is at the forefront of nonnative Phragmites australis subsp. australis expansion. Native Phragmites australis subsp. americanus , likely in decline in North America, is ecologically and culturally important and of conservation interest. In the greater Grand Canyon region, the Glen Canyon Dam led to loss of habitat upstream and increases in Phragmites downstream. Recent increases correspond with changes to dam operations and the arrival of nonnative Phragmites . Determining the native status of Phragmites stands along the Colorado River and around Lake Powell can inform complex management choices and restoration planning. Methods Phragmites subspecies at 83 locations from southern Utah through northern Arizona, United States were genetically tested using real-time PCR. Genetic diversity and structure were assessed using microsatellite loci for 13 native Phragmites stands. Morphological traits of southwestern native Phragmites were compared to those of nonnative Phragmites . Results Nonnative Phragmites was identified at four of the 83 locations. Native Phragmites in the study area is genetically diverse with little regional genetic structure, but substantial genetic differentiation among sites. Southwestern native Phragmites is morphologically variable, but characteristics can be used together to distinguish it from nonnative Phragmites . Conclusions The greater Grand Canyon and Glen Canyon regions support a large, genetically diverse native Phragmites population, which is potentially threatened by nonnative Phragmites and changes to river management. Determining conditions that would lead to nonnative Phragmites invasion of desert wetlands will facilitate discussions about the risks and benefits of Phragmites management in these unique ecosystems.

Arizona, Nevada, Utah↗
USGS2013

Genetic and morphometric differences demonstrate fine-scale population substructure of the yellow perch Perca flavescens: need for redefined management units

Whole-body morphometrics and 15 nuclear DNA microsatellite loci were analysed for 158 Perca flavescens collected during the spawning season from four spawning locations in central Lake Erie, two along the northern shore and two along the southern shore, to evaluate fine-scale variation (spanning 17-94 km). Results showed significant morphological and genetic differences among P. flavescens from the four locations. The magnitudes of differences were unrelated to geographic distance, demonstrating spatially heterogeneous levels of genetic divergence. These results linked morphometric and genetic variation, showing a discontinuity of scale between currently defined management units and population structure of P. flavescens in Lake Erie, and support that P. flavescens might exist as one or more metapopulations. Findings demonstrate the value of using complementary techniques for evaluating population structure.

Lake Erie↗
USGS2025

Origins of the water ice excavated by the Christmas Eve crater formation on Mars

On the 24th of December, 2021, a meteoroid struck the martian surface, producing a 150-m wide crater and excavating the lowest-latitude water ice observed on Mars to date. Knowledge of the preimpact depth, thickness and lateral continuity of the excavated ice would provide new insight into past environmental changes such as temperature and humidity of the atmosphere. In this work, we use the iSALE3D shock physics code to simulate the crater formation and constrain both the impact parameters and the original location of excavated ice. Analysis of the distal ejecta pattern suggests that the impact angle was 20±2.5◦ from horizontal. Based on a comparison of the simulated and observed crater morphology, we find the preimpact subsurface likely contained a stronger bedrock layer overlain by 15 m thick regolith layer. Our simulation results show that the ejected ice blocks visible in orbital images originated from shallow depths 3.2–11 m and from radii 30–60 m from the crater center. We conclude that the ice most likely originated from a massive ice layer at 3.2-11 m depth. The ice was likely also laterally discontinuous under the preimpact surface.

Journal of Geophysical Research: Planets↗
USGS2018

Molecular and morphometric analyses reveal cryptic diversity within freshwater mussels (Bivalvia: Unionidae) of the western Gulf coastal drainages of the USA

Past geological processes and climate change affected current species distributions and the genetic structure of riverine fauna. Western Gulf of Mexico coastal rivers harbour four mussel species within the genus Fusconaia (Bivalvia: Unionida). The distributions of these species are unclear owing to their indistinguishable shell morphologies. Using molecular phylogenetic and Fourier morphometric analyses, we examined phylogenetic relationships and morphological variation among the species and made inferences about the role of past geological and climatic factors in shaping the current genetic structure and distributions of these species in the region. Our results showed the presence of three Fusconaia species within the region: Fusconaia askewi , Fusconaia chunii and Fusconaia flava . We confirmed that Fusconaia lananensis is a junior synonym of F. askewi and that F. chunii is genetically distinct from F. askewi . The Trinity River has syntopic F. flava whose morphologies are indistinguishable from those of F. chunii . Divergence-time estimates matched major geological and climatic events in the region, where climate-driven river formations during the mid-Miocene to Pleistocene caused major diversification of Fusconaia species. Knowledge gained from the present study provides a better understanding of vicariant events that shaped current species distributions and helps to identify conservation priorities that apply to the Fusconaia species.

Biological Journal of the Linnean Society↗
USGS2005

Multilevel assessment of fish species traits to evaluate habitat degradation in streams of the upper midwest

We used species traits to examine the variation in fish assemblages for 21 streams in the Northern Lakes and Forests Ecoregion along a gradient of habitat disturbance. Fish species were classified based on five species trait-classes (trophic ecology, substrate preference, geomorphic preference, locomotion morphology, and reproductive strategy) and 29 categories within those classes. We used a habitat quality index to define a reference stream and then calculated Euclidean distances between the reference and each of the other sites for the five traits. Three levels of species trait analyses were conducted: (1) a composite measure (the sum of Euclidean distances across all five species traits), (2) Euclidean distances for the five individual species trait-classes, and (3) frequencies of occurrence of individual trait categories. The composite Euclidean distance was significantly correlated to the habitat index (r = -0.81; P = 0.001), as were the Euclidean distances for four of the five individual species traits (substrate preference: r = -0.70, P = 0.001; geomorphic preference: r = -0.69, P = 0.001; trophic ecology: r = -0.73, P = 0.001; and reproductive strategy: r = -0.64, P = 0.002). Although Euclidean distances for locomotion morphology were not significantly correlated to habitat index scores (r = -0.21; P = 0.368), analysis of variance and principal components analysis indicated that Euclidean distances for locomotion morphology contributed to significant variation in the fish assemblages among sites. Examination of trait categories indicated that low habitat index scores (degraded streams) were associated with changes in frequency of occurrence within the categories of all five of the species traits. Though the objectives and spatial scale of a study will dictate the level of species trait information required, our results suggest that species traits can provide critical information at multiple levels of data analysis. ?? Copyright by the American Fisheries Society 2005.

North American Journal of Fisheries Management↗
USGS1987

Lungfish burrows in the Upper Triassic Chinle and Dolores Formations, Colorado Plateau

Vertical-to-inclined, cylindrical trace fossils that occur in the Upper Triassic Chinle and Dolores Formations on the Colorado Plateau are interpreted to be the casts of lungfish burrows. The casts, which are as much as 11 cm in diameter and as much as 1.6 m long, were formed by passive silicilastic and carbonate sedimentation into apparently abandoned lungfish burrows. Locally, the burrow fillings are overwhelmingly abundant, and many intersect and have destroyed former burrow fillings. Superposition of bioturbation episodes has obliterated most primary sedimentary structures. This bioturbation has contributed to the mottled coloration and the knobby-weathering texture of the rocks. The burrow-fillings occur ubiquitously in three lithofacies, comprising 1) purple- and white-mottled, silicified sandstone and siltstone, 2) red and brown siltstone and mudstone, and 3) pink and green limestone. These strata were deposited in a continental environment that included fluvial channels and floodplains, sand sheets and playa mudflats, and lacustrine basins, marshes, and deltas. The identification of the trace fossils as the positive casts of lungfish burrows is based on their morphologic similarity to previously identified lungfish burrows and to available hand specimens. The widespread occurrence of the lungfish burrows in the Chinle and Dolores Formations attests to the extensive habitat that supported lungfish in the Late Triassic and to conditions favorable for burrow preservation. Analogy with the environments that support modern lungfish populations suggests that the Late Triassic climate in the study area provided sufficient moisture to support large populations of lungfish and that this climate was probably punctuated by seasonally dry periods.

Journal of Sedimentary Petrology↗
USGS2009

Genetic differentiation between sympatric and allopatric wintering populations of Snow Geese

Blackwater National Wildlife Refuge on the Delmarva Peninsula, Maryland, USA has been the wintering area of a small population of Lesser Snow Geese (Chen caerulescens caerulescens; LSGO) since the 1930s. Snow Geese primarily pair in wintering areas and gene flow could be restricted between this and other LSGO wintering populations. Winter pair formation also could facilitate interbreeding with sympatric but morphologically differentiated Greater Snow Geese (C. c. atlantica; GSGO).We sequenced 658 bp of the mitochondrial DNA control region for 68 Snow Geese from East Coast and Louisiana wintering populations to examine the level of genetic differentiation among populations and subspecies. We found no evidence for genetic differentiation between LSGO populations but, consistent with morphological differences, LSGO and GSGO were significantly differentiated. We also found a lack of genetic differentiation between different LSGO morphotypes from Louisiana. We examined available banding data and found the breeding range of Delmarva LSGO overlaps extensively with LSGO that winter in Louisiana, and documented movements between wintering populations. Our results suggest the Delmarva population of LSGO is not a unique population unit apart from Mid-Continent Snow Geese. ?? 2009 by the Wilson Ornithological Society.

Wilson Journal of Ornithology↗