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USGS2018

Recent advances in environmental flows science and water management—Innovation in the Anthropocene

The implementation of environmental flow regimes offers a promising means to protect and restore riverine, wetland and estuarine ecosystems, their critical environmental services and cultural/societal values. This Special Issue expands the scope of environmental flows and water science in theory and practice, offering 20 papers from academics, agency researchers and non‐governmental organisations, each with fresh perspectives on the science and management of environmental water allocations. Contributions confront the grand challenge for environmental flows and water management in the Anthropocene—the urgent need for innovations that will help to sustain the innate resilience of social–ecological systems under dynamic and uncertain environmental and societal futures. Basin‐scale and regional assessments of flow requirements mark a necessary advance in environmental water science in the face of rapid changes in water‐resource management activities worldwide (e.g. increases in dams, diversions, retention and reuse). Techniques for regional‐scale hydrological and ecohydrological modelling support ecological risk assessment and identification of priority flow management and river restoration actions. Changing flood–drought cycles, long‐term climatic shifts and associated effects on hydrological, thermal and water quality regimes add enormous uncertainty to the prediction of future ecological outcomes, regardless of environmental water allocations. An improved capacity to predict the trajectories of ecological change in rivers degraded by legacies of past impact interacting with current conditions and future climate change is essential. Otherwise, we risk unrealistic expectations from restoration of river and estuarine flow regimes. A more robust, dynamic and predictive approach to environmental water science is emerging. It encourages the measurement of process rates (e.g. birth rate, colonisation rate) and species traits (e.g. physiological requirements, morphological adaptations) as well as ecosystem states (e.g. species richness, assemblage structure), as the variables representing ecological responses to flow variability and environmental water allocations. Another necessary development is the incorporation of other environmental variables such as water temperature and sedimentary processes in flow–ecological response models. Based on contributions to this Special Issue, several recent compilations and the wider literature, we identify six major scientific challenges for further exploration, and seven themes for advancing the management of environmental water. We see the emerging frontier of environmental flows and water science as urgent and challenging, with numerous opportunities for reinvigorated science and methodological innovation in the expanding enterprise of environmental water linked to ecological sustainability and social well‐being.

Freshwater Biology↗

USGS2017

The state of the world’s mangroves in the 21st century under climate change

Concerted mangrove research and rehabilitation efforts over the last several decades have prompted a better understanding of the important ecosystem attributes worthy of protection and a better conservation ethic toward mangrove wetlands globally. While mangroves continue to be degraded and lost in specific regions, conservation initiatives, rehabilitation efforts, natural regeneration, and climate range expansion have promoted gains in other areas, ultimately serving to curb the high mangrove habitat loss statistics from the doom and gloom of the 1980s. We highlight those trends in this article and introduce this special issue of Hydrobiologia dedicated to the important and recurring Mangrove and Macrobenthos Meeting. This collection of papers represents studies presented at the fourth such meeting (MMM4) held in St. Augustine, Florida, USA, on July 18–22, 2016. Our intent is to provide a balanced message about the global state of mangrove wetlands by describing recent reductions in net mangrove area losses and highlighting primary research studies presented at MMM4 through a collection of papers. These papers serve not only to highlight on-going global research advancements, but also provide an overview of the vast amount of data on mangrove ecosystem ecology, biology and rehabilitation that emphasizes the uniqueness of the mangrove community.

Hydrobiologia↗

USGS2003

The National Map: from geography to mapping and back again

When the means of production for national base mapping were capital intensive, required large production facilities, and had ill-defined markets, Federal Government mapping agencies were the primary providers of the spatial data needed for economic development, environmental management, and national defense. With desktop geographic information systems now ubiquitous, source data available as a commodity from private industry, and the realization that many complex problems faced by society need far more and different kinds of spatial data for their solutions, national mapping organizations must realign their business strategies to meet growing demand and anticipate the needs of a rapidly changing geographic information environment. The National Map of the United States builds on a sound historic foundation of describing and monitoring the land surface and adds a focused effort to produce improved understanding, modeling, and prediction of land-surface change. These added dimensions bring to bear a broader spectrum of geographic science to address extant and emerging issues. Within the overarching construct of The National Map, the U.S. Geological Survey (USGS) is making a transition from data collector to guarantor of national data completeness; from producing paper maps to supporting an online, seamless, integrated database; and from simply describing the Nation’s landscape to linking these descriptions with increased scientific understanding. Implementing the full spectrum of geographic science addresses a myriad of public policy issues, including land and natural resource management, recreation, urban growth, human health, and emergency planning, response, and recovery. Neither these issues nor the science and technologies needed to deal with them are static. A robust research agenda is needed to understand these changes and realize The National Map vision. Initial successes have been achieved. These accomplishments demonstrate the utility of The National Map to the Nation and give confidence in evolving its future applications.

Photogrammetric Engineering and Remote Sensing↗

USGS2005

Geology based planning and the aggregate industry -Perspectives from opposite sides of the globe

In Australia and America, encroachment by conflicting land uses, zoning restrictions, and the "not in my backyard" syndrome make it increasingly difficult to access high-quality aggregate resources located near the market areas. Attempts by government agencies in America to protect aggregate resources for future development have met with varying degrees of success. The State of Queensland, Australia, designates aggregate resource areas as Key Resource Areas, which protect the resource and the routes to transport the resource, provide a separation area from incompatible land uses, and indicate the likelihood that the area is free from conflicting social or environmental issues. Copyright ?? 2005 by SME.

Conference Paper↗

USGS2016

Midcontinent Prairie-Pothole wetlands and climate change: An Introduction to the Supplemental Issue

The multitude of wetlands in the Prairie Pothole Region of North America forms one of Earth’s largest wetland complexes. The midcontinent location exposes this ecologically and economically important wetland system to a highly variable climate, markedly influencing ponded-water levels, hydroperiods, chemical characteristics, and biota of individual basins. Given their dominance on the landscape and recognized value, great interest in how projected future changes in climate will affect prairie-pothole wetlands has developed and spawned much scientific research. On June 2, 2015, a special symposium, “Midcontinent Prairie-Pothole Wetlands: Influence of a Changed Climate,” was held at the annual meeting of the Society of Wetland Scientists in Providence, Rhode Island, USA. The symposium’s twelve presenters covered a wide range of relevant topics delivered to a standing-room-only audience. Following the symposium, the presenters recognized the need to publish their presented papers as a combined product to facilitate widespread distribution. The need for additional papers to more fully cover the topic of prairie-pothole wetlands and climate change was also identified. This supplemental issue of Wetlands is the realization of that vision.

Prairie Pothole Region↗

USGS1997

Benthic boundary layer processes in the Lower Florida Keys

This special issue of Geo-Marine Letters, "Benthic Boundary Layer Processes in the Lower Florida Keys," includes 12 papers that present preliminary results from the Key West Campaign. The Dry Tortugas and Marquesas Keys test sites were selected by a group of 115 scientists and technicians to study benthic boundary layer processes in a carbonate environment controlled by bioturbation and biogeochemical processes. Major activities included remote sediment classification; high-frequency acoustic scattering experiments; sediment sampling for radiological, geotechnical, biological, biogeochemical, physical, and geoacoustic studies; and hydrodynamic studies using an instrumented tetrapod. All these data are being used to improve our understanding of the effects of environmental processes on sediment structure and behavior.

Florida↗

USGS2016

A science of integration: frameworks, processes, and products in a place-based, integrative study

Integrative research is increasingly a priority within the scientific community and is a central goal for the evolving field of sustainability science. While it is conceptually attractive, its successful implementation has been challenging and recent work suggests that the move towards interdisciplinarity and transdisciplinarity in sustainability science is being only partially realized. To address this from the perspective of social-ecological systems (SES) research, we examine the process of conducting a science of integration within the Southcentral Alaska Test Case (SCTC) of Alaska-EPSCoR as a test-bed for this approach. The SCTC is part of a large, 5 year, interdisciplinary study investigating changing environments and adaptations to those changes in Alaska. In this paper, we review progress toward a science of integration and present our efforts to confront the practical issues of applying proposed integration frameworks. We: (1) define our integration framework; (2) describe the collaborative processes, including the co-development of science through stakeholder engagement and partnerships; and (3) illustrate potential products of integrative, social-ecological systems research. The approaches we use can also be applied outside of this particular framework. We highlight challenges and propose improvements for integration in sustainability science by addressing the need for common frameworks and improved contextual understanding. These insights may be useful for capacity-building for interdisciplinary projects that address complex real-world social and environmental problems.

Sustainability Science↗

USGS2019

India National Gas Hydrate Program Expedition 02 summary of scientific results: Evaluation of natural gas hydrate-bearing pressure cores

India’s National Gas Hydrate Program (NGHP) Expedition-02 was conducted in 2015 with the goal of investigating numerous locations that had been determined to be prospective for gas hydrate at high saturation in sand-rich reservoirs. Initial logging while drilling data revealed extensive sand-rich gas hydrate occurrences at multiple drill sites in two broad areas. These sites were further investigated through the acquisition and analyses of pressure cores designed to document 1) gas hydrate occurrence within the reservoirs; 2) the petrophysical nature of the reservoir and associated seals, in their native state as well as during and after the dissociation of gas hydrate; 3) the geomechanical nature of the reservoir and seals; and 4) the geochemical nature of reservoir fluids. The cores were initially evaluated at sea, and select subsamples were transferred for more extensive analyses at specialized laboratories both in Japan and in the United States. The samples encompassed a wide range of gas hydrate saturation (from 0 to 100%) within reservoir sediments ranging from sandy silts to gravels, providing opportunities to extend and refine insights into the nature of gas hydrate reservoirs gained in previous programs. Select findings and implications of this coordinated pressure-core evaluation program are reported in numerous papers within the NGHP-02 Special Thematic Volume and are summarized here with respect to the following issues: the evaluation and mitigation of core disturbance, the assessment of gas hydrate occurrence and saturation, the geomechanics and petrophysics of both reservoirs and “seals” in situ, and the potential dynamic geomechanical and petrophysical behavior of reservoir and seals during production.

Journal of Marine and Petroleum Geology↗

USGS2001

Interactions between fire and invasive plants in temperate grasslands of North America

A substantial number of invasive grasses, forbs and woody plants have invaded temperate grasslands in North America. Among the invading species are winter annuals, biennials, cool-season perennials, warm-season perennials, vines, shrubs, and trees. Many of these species have been deliberately introduced and widely planted; some are still used for range improvement, pastures, lawns, and as ornamentals, though many are listed as state or federal noxious weeds. Others have been greatly facilitated by widespread land disturbance. Historically, fire has been a major selective force in the evolution of temperate grasslands. Further, prescribed fire is commonly used as a method of ecological management for native grassland communities as well as in conjunction with restoration efforts. Within this context, it is important to understand how invasive species will interact with natural and prescribed fire regimes. In this paper, we consider what is known about how exotic species that invade temperate grasslands relate to fire. The primary issues addressed for each species are (1) Does fire appear to enhance colonization? (2) To what degree does fire affect the survival of plants? (3) Are plants that are burned able to regrow following fire and, if so, how rapidly can they recover? (4) How important is competition with native species to the response to fire? and (5) What effect does an invasive species have on the characteristics of the fire regime? For many species, results are preliminary, incomplete, or inconsistent among studies. For this reason, many of the conclusions drawn for individual species must be considered preliminary. Based on analyses of individual species, a conceptual framework is presented for considering how invasive plants may interact with fire when they invade an ecosystem. The major categories of influences are the native community, the fire regime, growth conditions for both invasive and native species, and influences that disturbances, human impacts, and landscape characteristics have had in the past and will have in the future. The examples considered in this paper provide support for a few, tentative generalizations. First, among our current worst invaders of temperate grasslands, adaptation to fire is quite variable. Some species are not well adapted to burning and can be easily eliminated; other species are better adapted but can still be eliminated if fire occurs during periods of particular vulnerability and/or at high frequency. There is a set of species that is extremely well adapted to fire and will not be eliminated through burning alone. Second, competitive interactions with native species play a crucial role in the success of nonnative invaders. In cases where differential burn responses between invasive and native species can be exploited, and adequate populations of native dominant species are present, fire can sometimes tip the competitive balance away from invasives. Third, there are a few invasive species that have exceptional attributes and for which there are no easy solutions. The ability of cheatgrass ( Bromus tectorum ) to enhance fire, the ability of Chinese tallow ( Triadica sebifera ) to suppress fire, and the ability of leafy spurge ( Euphorbia esula ) to resprout from repeated injury make these species exceptional threats to native diversity. Finally, the available information for many invasive species is very incomplete, partic- ularly with regard to how fire affects competitive interactions with the native community. There is much more we need to know if we are to consistently predict how invasive species will respond to fire and how burning can best be used to manage for natural diversity.

Conference Paper↗

USGS2009

Introduction to "northern Gulf of Mexico ecosystem change and hazards susceptibility"

The northern Gulf of Mexico and its diverse natural resources are threatened by population and development pressure, and by the impacts of rising sea level and severe storms. In the wake of the devastating 2005 hurricane season, and in response to the complex management issues facing the region, the U.S. Geological Survey organized the multidisciplinary “Northern Gulf of Mexico Ecosystem Change and Hazards Susceptibility” project. This special issue of Geo-Marine Letters hosts a few of the early results in the form of 11 papers covering three themes: (1) the control exerted by the underlying geologic framework on geomorphology and nearshore processes and features; (2) impact of human activities on nearshore water quality; and (3) hurricanes and associated effects.

Geo-Marine Letters↗

USGS1982

On the availability of geoscientific data and scientific collaborators of an in Africa

In addition to the technical papers, the major topic of discussion at the symposium which formed the stepping-off point for this issue of Geoexplorution was the difficult communications between specialists on Africa and the lack of available geological and geophysical data. However, much of this difficulty stems from a lack of advice on where to turn for data and for eollaboration with other interested scientists. This short note attempts to address these problems with some possible solutions.

Geoexploration↗

USGS2021

Cyanotoxin mixture models: Relating environmental variables and toxin co-occurrence to human exposure risk

Toxic cyanobacterial blooms, often containing multiple toxins, are a serious public health issue. However, there are no known models that predict a cyanotoxin mixture (anatoxin-a, microcystin, saxitoxin). This paper presents two cyanotoxin mixture models (MIX) and compares them to two microcystin (MC) models from data collected in 2016–2017 from three recurring cyanobacterial bloom locations in Kabetogama Lake, Voyageurs National Park (Minnesota, USA). Models include those using near-real-time environmental variables (readily available) and those using additional comprehensive variables (based on laboratory analyses). Comprehensive models (R 2 = 0.87 MC; R 2 = 0.86 MIX) explained more variability than the environmental models (R 2 = 0.58 MC; R 2 = 0.57 MIX). Although neither MIX model was a better fit than the MC models, the MIX models produced no false negatives in the calibration dataset, indicating that all observations above regulatory guidelines were simulated by the MIX models. This is the first known use of Virtual Beach software for a cyanotoxin mixture model, and the methods used in this paper may be applicable to other lakes or beaches.

Minnesota↗

USGS2009

Cross-comparison of the IRS-P6 AWiFS sensor with the L5 TM, L7 ETM+, & Terra MODIS sensors

As scientists and decision makers increasingly rely on multiple Earth-observing satellites to address urgent global issues, it is imperative that they can rely on the accuracy of Earth-observing data products. This paper focuses on the crosscomparison of the Indian Remote Sensing (IRS-P6) Advanced Wide Field Sensor (AWiFS) with the Landsat 5 (L5) Thematic Mapper (TM), Landsat 7 (L7) Enhanced Thematic Mapper Plus (ETM+), and Terra Moderate Resolution Imaging Spectroradiometer (MODIS) sensors. The cross-comparison was performed using image statistics based on large common areas observed by the sensors within 30 minutes. Because of the limited availability of simultaneous observations between the AWiFS and the Landsat and MODIS sensors, only a few images were analyzed. These initial results are presented. Regression curves and coefficients of determination for the top-of-atmosphere (TOA) trends from these sensors were generated to quantify the uncertainty in these relationships and to provide an assessment of the calibration differences between these sensors. ?? 2009 SPIE.

Conference Paper↗

USGS2013

Conservation and Ecology of Marine Forage Fishes--Proceedings of a Research Symposium, September 2012

Locally and globally, there is growing recognition of the critical roles that herring, smelt, sand lance, eulachon, and other forage fishes play in marine ecosystems. Scientific and resource management entities throughout the Salish Sea, agree that extensive information gaps exist, both in basic biological knowledge and parameters critical to fishery management. Communication and collaboration among researchers also is inadequate. Building on the interest and enthusiasm generated by recent forage fish workshops and symposia around the region, the 2012 Research Symposium on the Conservation and Ecology of Marine Forage Fishes was designed to elucidate practical recommendations for science and policy needs and actions, and spur further collaboration in support for the precautionary management of forage fish. This dynamic and productive event was a joint venture of the Northwest Straits Commission Forage Fish Program, U.S. Geological Survey (USGS), Washington Department of Fish and Wildlife (WDFW), and The Puget Sound Partnership. The symposium was held on September 12–14, 2012, at the University of Washington, Friday Harbor Laboratories campus. Sixty scientists, graduate students, and fisheries policy experts convened; showcasing ongoing research, conservation, and management efforts targeting forage fish from regional and national perspectives. The primary objectives of this event were to: (1) review current research and management related to marine forage fish species; and (2) identify priority science and policy needs and actions for Washington, British Columbia, and the entire West Coast. Given the diversity of knowledge, interests, and disciplines surrounding forage fish on both sides of the international border, the organizing committee made a concerted effort to contact many additional experts who, although unable to attend, provided valuable insights and ideas to the symposium structure and discussions. The value of the symposium format was highlighted in the closing remarks delivered by Joseph Gaydos, SeaDoc Society and Chair of the Puget Sound Science Panel. Dr. Gaydos’ presentation referenced the 2011 paper by Murray Rudd in the journal Conservation Biology , “How research-prioritization exercises affect conservation policy.” The paper points out that policy makers and funding agencies are more likely to gain a full understanding of issues when they are presented with research findings from an aligned research program. That is, compared to unaligned research strategies, where work is not based on identified research priorities.

Open-File Report↗

USGS2015

Global trends in emerging viral diseases of wildlife origin

Fifty years ago, infectious diseases were rarely considered threats to wildlife populations, and the study of wildlife diseases was largely a neglected endeavor. Furthermore, public health leaders at that time had declared that “it is time to close the book on infectious diseases and the war against pestilence won,” a quote attributed to Dr. William H. Stewart in 1967. There is some debate whether he actually said these words; however, they reflect the widespread belief at that time (Spellberg, 2008). Leap forward to today, and the book on infectious diseases has been dusted off. There is general consensus that the global environment favors the emergence of infectious diseases, and in particular, diseases of wildlife origin (Taylor et al., 2001). Examples of drivers of these infectious diseases include climate and landscape changes, human demographic and behavior changes, global travel and trade, microbial adaptation, and lack of appropriate infrastructure for wildlife disease control and prevention (Daszak et al., 2001). The consequences of these emerging diseases are global and profound with increased burden on the public health system, negative impacts on the global economy and food security, declines and extinctions of wildlife species, and subsequent loss of ecosystem integrity. For example, 35 million people are currently living with HIV infection globally (http://www.who.int/gho/hiv/en); 400 million poultry have been culled since 2003 as a result of efforts to control highly pathogenic H5N1 avian influenza (http://www.fao.org/avianflu/en/index.html), and there are increasing biological and ecological consequences. Examples of health threats to biodiversity include the “spillover” of human diseases to great ape populations (Köndgen et al., 2008), the near-extirpation of the black-footed ferret from canine distemper and sylvatic plague (for a review see Abbott et al., 2012), and threats to Hawaiian forest birds from introduced pathogens such as avian malaria and avian pox (van Riper et al., 1986, 2002). There are also newly discovered pathogens or diseases that have resulted in population declines, and global extinctions of several species. Examples include Batrachochytrium dendrobatidis, which causes a cutaneous fungal infection of amphibians and is linked to declines of amphibians globally (Kriger and Hero, 2009); and recently discovered Pseudogymnoascus (Geomyces) destructans, the etiologic agent of white-nose syndrome (WNS), which has caused precipitous declines of North American bat species (Blehert et al., 2009). Furthermore, there is increasing evidence of the subsequent impacts on human and ecosystem health; for example, increasing risk of exposure to Lyme disease as a consequence of decreased biodiversity (LoGiudice et al., 2003) as well as the economic cost of the loss of bats due to decreased insect control services (Boyles et al., 2011). Figure A12-1 is a timeline of important diseases investigated by the U.S. Geological Survey since the 1970s, which illustrates three factors: 1. The unprecedented emergence of new pathogens and geographic spread of known pathogens since the 1990s; 2. Diseases are increasingly causing large-scale, negative impacts on wildlife populations and spreading over larger geographic areas rather than remaining localized; and 3. Diseases are increasingly of concern for multiple sectors, including public health, agriculture and wildlife management agencies. Of increasing concern are these novel diseases such as WNS as they are hard to anticipate, particularly devastating to human health or wildlife populations, challenging to manage, spread over large geographic areas in short time periods, and may result in ecological ripple effects that are difficult to predict. The following article provides examples of recently emerged viral diseases of wildlife origin. The examples have been selected to illustrate the drivers of emerging viral diseases, both novel pathogens and previously known diseases, the impacts of these diseases, as well as the role of wildlife both as “villains” or reservoirs as well as “victims” of these viral diseases. The article also discusses potential management strategies for emerging viral diseases in wildlife populations and future science directions in wildlife health to prevent, prepare, respond to, and recover from these disease events. Finally, the concept of One Health and its potential role in developing solutions to these issues of mutual concern is discussed.

Conference Paper↗

USGS2015

Formulating the American Geophysical Union's Scientific Integrity and Professional Ethics Policy: Challenges and lessons learned

Creating an ethics policy for a large, diverse geosciences organization is a challenge, especially in the midst of the current contentious dialogue in the media related to such issues as climate change, sustaining natural resources, and responding to natural hazards. In 2011, the American Geophysical Union (AGU) took on this challenge, creating an Ethics Task Force to update their ethics policies to better support their new Strategic Plan and respond to the changing scientific research environment. Dialogue with AGU members and others during the course of creating the new policy unveiled some of the following issues to be addressed. Scientific results and individual scientists are coming under intense political and public scrutiny, with the efficacy of the science being questioned. In some cases, scientists are asked to take sides and/or provide opinions on issues beyond their research, impacting their objectivity. Pressure related to competition for funding and the need to publish high quality and quantities of papers has led to recent high-profile plagiarism, data fabrication, and conflict of interest cases. The complexities of a continuously advancing digital environment for conducting, reviewing, and publishing science has raised concerns over the ease of plagiarism, fabrication, falsification, inappropriate peer review, and the need for better accessibility of data and methods. Finally, students and scientists need consistent education and encouragement on the importance of ethics and integrity in scientific research. The new AGU Scientific Integrity and Ethics Policy tries to address these issues and provides an inspirational code of conduct to encourage a responsible, positive, open, honest scientific research environment.

Book chapter↗

USGS2017

Model-based approaches to deal with detectability: a comment on Hutto (2016)

In a recent paper, Hutto (2016a) challenges the need to account for detectability when interpreting data from point counts. A number of issues with model-based approaches to deal with detectability are presented, and an alternative suggested: surveying an area around each point over which detectability is assumed certain. The article contains a number of false claims and errors of logic, and we address these here. We provide suggestions about appropriate uses of distance sampling and occupancy modeling, arising from an intersection of design- and model-based inference.

Ecological Applications↗

USGS1991

Unified theory on power laws for flow resistance

Two general power formulas, one for hydraulically smooth flows and the other for fully rough flows, are derived in a rational way from the widely accepted logarithmic formulas for the velocity profile and the Darcy‐Weisbach friction factor. A regression analysis based on the method of least squares is used to determine the valid range of the local velocity (or normal distance from the wall) in the power formula. Some older empirical formulas, such as Lacey's, Manning's, Blasius', and Hazen‐Williams', and their valid ranges, are actually explained analytically by the results. Incomplete self‐similarity of the power law, in which the exponent and the associated coefficient vary with the similarity parameters, such as the Reynolds number and the relative roughness, is elucidated through the parametric representations of the power formulas and their counterparts based on the logarithmic law. This paper examines the concept and rationale behind the power formulation of uniform turbulent shear flows, thereby addressing some critical issues in the modeling of flow resistance based on the power law.

Journal of Hydraulic Engineering↗