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USGS2010

Harmful algal blooms: A case study in two mesotrophic drinking water supply reservoirs in South Carolina

Algal blooms can be harmful and a nuisance in a variety of aquatic ecosystems, including reservoirs and lakes. Cyanobacterial(blue-green algae) harmful algal blooms are notorious for producing both taste-and-odor compounds and potent toxins that may affect human health. Taste–and-odor episodes are aesthetic problems often caused by cyanobacterial-produced organic compounds (geosmin and methylisoborneol) and are common in reservoirs and lakes used as source water supplies. The occurrences of these taste-and-odor compounds and toxins (like microcystin) can be sporadic and vary in intensity both spatially and temporally. Recent publications by the U.S. Geological Survey address this complexity and provide protocols for cyanotoxin and taste-and-odor sampling programs. A case study conducted by the U.S. Geological Survey, in cooperation with Spartanburg Water, monitored two mesotrophic reservoirs that serve as public drinking water supplies in South Carolina. Study objectives were (1) to identify spatial and temporal occurrence of the taste-and-odor compound geosmin and the cyanotoxin microcystin and (2) to assess the associated limnological conditions before, during, and after these occurrences. Temporal and spatial occurrence of geosmin and microcystin were highly variable from 2007 to 2009. The highest geosmin concentrations tended to occur in the spring. Microcystin tended to occur in the late summer and early fall, but occurrence was rare and well below World Health Organization guidelines for finished drinking water and recreational activities. No current U.S. Environmental Protection Agency standards are applicable to cyanotoxins in drinking or ambient water. In general, elevated geosmin and microcystin concentrations were the result of complex interactions between cyanobacterial community composition, nutrient availability, water clarity, hydraulic residence time, and stratification.

South Carolina↗

USGS2020

Post-release monitoring of a stranded and rehabilitated short-finned pilot whale (Globicephala macrorhynchus) reveals current-assisted travel

A subadult female short-finned pilot whale (Globicephala macrorhynchus), stranded on the northeastern Gulf of Mexico coast of Florida in June 2017, was rehabilitated for 38 days and then monitored with a satellite-linked, time-depth recording tag for 32 days after being released off the West Florida Shelf. The individual, “Gale,” appeared to regularly use ocean currents to facilitate a southeastward movement around Florida, and then a northward movement along the continental shelf break to the waters off Cape Hatteras, North Carolina. Indeed, 57% of her travel along the coast of Florida was at speeds consistent with the surface speed and direction of the Gulf Stream. Overall, current-assisted travel contributed to a 19% increase in distance traveled (4,152 km), and to an average rate of travel (130 km·day-1) that was higher than previously reported for Globicephala spp. Gale’s dive behavior was typical of other short-finned pilot whale observations, with average dive depths (243 ± 136 m, max = 712 m) and durations (7.9 ± 2.2 min, max = 16.0 min) within the range of reported values for Globicephala spp. Gale also occupied habitats known to be used by pilot whales, and her movements and behaviors were consistent with those observed in other short-finned pilot whales in the Gulf of Mexico and northwestern Atlantic Ocean. The information presented here contributes to a better understanding of short-finned pilot whales, and to the assessment of rehabilitation and release protocols.

Florida, Georgia, North Carolina, South Carolina↗

USGS2025

What is eDNA method standardization and why do we need it?

The rapid advancement of environmental DNA ( eDNA ) science in the past two decades has inspired a concomitant growth in the development of eDNA sampling and analytical methods. However, these methods are often developed by individual laboratories or institutions, which can isolate protocols within programmes, agencies or regions and prevent the beneficial exchange of data and ideas. Recent efforts to advance national and international coordination have resulted in a groundswell of standardisation efforts, but there is still considerable confusion around the role of formal standards for regulatory or research applications. With this commentary, we hope to provide clarity on the terminology used in standardisation discussions, including the differences between formal standards and best practice guidelines. Additionally, we discuss how eDNA method choice may be informed by environmental management scenarios and review examples of formal eDNA method standards being used to inform management action. The eDNA community now has an opportunity to develop a roadmap for method development to help close standardisation gaps, advance eDNA method adoption and accelerate our ability to monitor biological life at the scales our current environmental challenges demand.

Metabarcoding and Metagenomics↗

USGS2014

Summary of preliminary step-trend analysis from the Interagency Whitebark Pine Long-termMonitoring Program—2004-2013

In mixed and dominant stands, whitebark pine ( Pinus albicaulis ) occurs in over two million acres within the six national forests and two national parks that comprise the Greater Yellowstone Ecosystem (GYE). Currently, whitebark pine, an ecologically important species, is impacted by multiple ecological disturbances; white pine blister rust ( Cronartium ribicola ), mountain pine beetle ( Dendroctonus ponderosae ), wildfire, and climate change all pose significant threats to the persistence of whitebark pine populations. Substantial declines in whitebark pine populations have been documented throughout its range. Under the auspices of the Greater Yellowstone Coordinating Committee (GYCC), several agencies began a collaborative, long-term monitoring program to track and document the status of whitebark pine across the GYE. This alliance resulted in the formation of the Greater Yellowstone Whitebark Pine Monitoring Working Group (GYWPMWG), which consists of representatives from the U.S. Forest Service (USFS), National Park Service (NPS), U.S. Geological Survey (USGS), and Montana State University (MSU). This groundbased monitoring program was initiated in 2004 and follows a peer-reviewed protocol (GYWPMWG 2011). The program is led by the Greater Yellowstone Inventory and Monitoring Network (GRYN) of the National Park Service in coordination with multiple agencies. More information about this monitoring effort is available at: http://science. nature.nps.gov/im/units/gryn/monitor/whitebark_pine.cfm. The purpose of this report is to provide a draft summary of the first step-trend analysis for the interagency, long-term monitoring of whitebark pine health to the Interagency Grizzly Bear Study Team (IGBST) as part of a synthesis of the state of whitebark pine in the GYE. Due to the various stages of the analyses and reporting, this is the most efficient way to provide these results to the IGBST.

Natural Resource Data Series↗

USGS2003

Multiple stressor effects in relation to declining amphibian populations

Original research discusses the protocols and approaches to studying the effects of multiple environmental stressors on amphibian populations and gives new perspectives on this complicated subject. This new publication integrates a variety of stressors that can act in concert and may ultimately cause a decline in amphibian populations. Sixteen peer-reviewed papers cover: Toxicity Assessment examines methods, which range from long-established laboratory approaches for evaluating adverse chemical effects to amphibians, to methods that link chemicals in surface waters, sediments, and soils with adverse effects observed among amphibians in the field. Field and Laboratory Studies illustrates studies in the evaluation of multiple stressor effects that may lead to declining amphibian populations. A range of laboratory and field studies of chemicals, such as herbicides, insecticides, chlorinated organic compounds, metals, and complex mixtures are also included. Causal Analysis demonstrates the range of tools currently available for evaluating "cause-effect" relationships between environmental stressors and declining amphibian populations. Audience: This new publication is a must-have for scientists and resource management professionals from diverse fields, including ecotoxicology, chemistry, ecology, field biology, conservation biology, and natural resource management.

Special Technical Report↗

USGS2016

Effects of lek count protocols on greater sage-grouse population trend estimates

Annual counts of males displaying at lek sites are an important tool for monitoring greater sage-grouse populations ( Centrocercus urophasianus ), but seasonal and diurnal variation in lek attendance may increase variance and bias of trend analyses. Recommendations for protocols to reduce observation error have called for restricting lek counts to within 30 minutes of sunrise, but this may limit the number of lek counts available for analysis, particularly from years before monitoring was widely standardized. Reducing the temporal window for conducting lek counts also may constrain the ability of agencies to monitor leks efficiently. We used lek count data collected across Wyoming during 1995−2014 to investigate the effect of lek counts conducted between 30 minutes before and 30, 60, or 90 minutes after sunrise on population trend estimates. We also evaluated trends across scales relevant to management, including statewide, within Working Group Areas and Core Areas, and for individual leks. To further evaluate accuracy and precision of trend estimates from lek count protocols, we used simulations based on a lek attendance model and compared simulated and estimated values of annual rate of change in population size (λ) from scenarios of varying numbers of leks, lek count timing, and count frequency (counts/lek/year). We found that restricting analyses to counts conducted within 30 minutes of sunrise generally did not improve precision of population trend estimates, although differences among timings increased as the number of leks and count frequency decreased. Lek attendance declined >30 minutes after sunrise, but simulations indicated that including lek counts conducted up to 90 minutes after sunrise can increase the number of leks monitored compared to trend estimates based on counts conducted within 30 minutes of sunrise. This increase in leks monitored resulted in greater precision of estimates without reducing accuracy. Increasing count frequency also improved precision. These results suggest that the current distribution of count timings available in lek count databases such as that of Wyoming (conducted up to 90 minutes after sunrise) can be used to estimate sage-grouse population trends without reducing precision or accuracy relative to trends from counts conducted within 30 minutes of sunrise. However, only 10% of all Wyoming counts in our sample (1995−2014) were conducted 61−90 minutes after sunrise, and further increasing this percentage may still bias trend estimates because of declining lek attendance.

Journal of Wildlife Management↗

USGS2017

Potential for spatial displacement of Cook Inlet beluga whales by anthropogenic noise in critical habitat

The population of beluga whales in Cook Inlet, Alaska, USA, declined by nearly half in the mid-1990s, primarily from an unsustainable harvest, and was listed as endangered in 2008. In 2014, abundance was ~340 whales, and the population trend during 1999-2014 was -1.3% yr -1 . Cook Inlet beluga whales are particularly vulnerable to anthropogenic impacts, and noise that has the potential to reduce communication and echolocation range considerably has been documented in critical habitat; thus, noise was ranked as a high potential threat in the Cook Inlet beluga Recovery Plan. The current recovery strategy includes research on effects of threats potentially limiting recovery, and thus we examined the potential impact of anthropogenic noise in critical habitat, specifically, spatial displacement. Using a subset of data on anthropogenic noise and beluga detections from a 5 yr acoustic study, we evaluated the influence of noise events on beluga occupancy probability. We used occupancy models, which account for factors that affect detection probability when estimating occupancy, the first application of these models to examine the potential impacts of anthropogenic noise on marine mammal behavior. Results were inconclusive, primarily because beluga detections were relatively infrequent. Even though noise metrics (sound pressure level and noise duration) appeared in high-ranking models as covariates for occupancy probability, the data were insufficient to indicate better predictive ability beyond those models that only included environmental covariates. Future studies that implement protocols designed specifically for beluga occupancy will be most effective for accurately estimating the effect of noise on beluga displacement.

Alaska↗

USGS2017

Multiple-source tracking: Investigating sources of pathogens, nutrients, and sediment in the Upper Little River Basin, Kentucky, water years 2013–14

The South Fork Little River (SFLR) and the North Fork Little River (NFLR) are two major headwater tributaries that flow into the Little River just south of Hopkinsville, Kentucky. Both tributaries are included in those water bodies in Kentucky and across the Nation that have been reported with declining water quality. Each tributary has been listed by the Kentucky Energy and Environment Cabinet—Kentucky Division of Water in the 303(d) List of Waters for Kentucky Report to Congress as impaired by nutrients, pathogens, and sediment for contact recreation from point and nonpoint sources since 2002. In 2009, the Kentucky Energy and Environment Cabinet—Kentucky Division of Water developed a pathogen total maximum daily load (TMDL) for the Little River Basin including the SFLR and NFLR Basins. Future nutrient and suspended-sediment TMDLs are planned once nutrient criteria and suspended-sediment protocols have been developed for Kentucky. In this study, different approaches were used to identify potential sources of fecal-indicator bacteria (FIB), nitrate, and suspended sediment; to inform the TMDL process; and to aid in the implementation of effective watershed-management activities. The main focus of source identification was in the SFLR Basin. To begin understanding the potential sources of fecal contamination, samples were collected at 19 sites for densities of FIB ( E. coli ) in water and fluvial sediment and at 11 sites for Bacteroidales genetic markers (General AllBac, human HF183, ruminant BoBac, canid BacCan, and waterfowl GFD) during the recreational season (May through October) in 2013 and 2014. Results indicated 34 percent of all E. coli water samples ( n =227 samples) did not meet the U.S. Environmental Protection Agency 2012 recommended national criteria for primary recreational waters. No criterion currently exists for E. coli in fluvial sediment. By use of the Spearman’s rank correlation test, densities of FIB in fluvial sediments were observed to have a statistically significant positive correlation with drainage area. As drainage area increased, so did the densities of FIB in the fluvial sediments. There was no statistically significant correlation between drainage area and FIB in water. The human-associated marker (HF183) was found above the detection limit in 26 percent of the samples ( n =120 samples); a higher proportion of positive samples was in the NFLR Basin. The ruminant-associated marker (BoBac) was above the detection limit in 65 percent of samples; a higher proportion of positive samples was in the headwaters of the SFLR Basin. Nutrient yields differed between the SFLR and NFLR Basins. Comparatively, the SFLR Basin produced the largest estimated mean yields of total nitrogen (16,000 pounds per year per square mile (lb/yr/mi 2 ) and nitrite plus nitrate nitrogen (12,500 lb/yr/mi 2 ), and the NFLR Basin produced the largest estimated mean yields of ammonia plus organic nitrogen (4,700 lb/yr/mi 2 ), total phosphorus (1,100 lb/yr/mi 2 ), and orthophosphorus (590 lb/yr/mi 2 ). Nitrate sources in surface water were assessed in both basins using dual-nitrate isotope (nitrogen and oxygen) ratios. Data from the different land uses in the SFLR Basin showed differences in nitrate concentrations and overlapping, but moderately distinct, isotopic signatures. Predominantly forested sites consistently had low nitrate concentrations (median = 0.233 milligrams per liter) with minimal variability, and agricultural sites had the highest nitrate concentrations (median = 7.55 milligrams per liter) with the greatest variability. The median nitrate concentration for sites with mixed land use was 2.66 milligrams per liter. Dual-isotope data for forested sites plotted within ranges characteristic of soil-derived nitrate with possible but minimal influence from recycled atmospheric nitrate. Ranges of dual-isotope data for sites with agricultural and mixed land uses were characteristic of possible mixtures of chemical fertilizer, soil-derived nitrate, and manure and septic wastes. In the NFLR Basin, a positive linear relation was observed between nitrate concentrations and nitrogen isotope ratios (δ 15 N NO3 ) (R 2 =0.56; p -value <0.001) that potentially suggests the NFLR Basin has a higher proportion of δ 15 N NO3 -enriched sources, such as manure and sewage. However, mixing of other nitrate-derived sources cannot be excluded, because many values of δ 15 N NO3 and concentrations of nitrate showed minimal variation and plotted within dual-nitrate isotope ranges characteristic of fertilizer and soil-derived nitrate sources. A sediment-fingerprinting approach was used to quantify the relative contribution of four upland sources in the SFLR Basin (agricultural, pasture, riparian/forest, and streambank) to understand how land management affects suspended-sediment concentration. Carbon isotope ratios (δ 13 C), together with calcium and carbon concentrations, were the best indicators of sediment source; the uncertainty was less than 11 percent. Fine-sediment samples collected at the SFLR Basin outlet indicated streambanks as the largest source of the fine sediment to the stream followed by cropland and riparian/forest-source areas, respectively; pasture was a minor contributing source. Streambanks and cropland were essentially equal contributors of fine sediment at the NFLR Basin outlet.

Kentucky↗

USGS2012

Building on previous OSL dating techniques for gypsum: a case study from Salt Basin playa, New Mexico and Texas

The long term stability and reliability of the luminescence signal for gypsum has not been well documented or systematically measured until just recently. A review of the current literature for luminescence dating of gypsum is compiled here along with original efforts at dating an intact and in-situ bed of selenite gypsum at Salt Basin Playa, New Mexico and Texas. This effort differs from other documented luminescence dating efforts because the gypsum is not powdery or redistributed from its original growth patterns within the playa basin but is instead of a crystalline form. Sixteen ages from eight cores were ultimately produced with seven of the ages coming from rare detrital quartz encased in or with the gypsum crystals while the remaining ages are from the crystalline gypsum. As far as can be ascertained, the quartz was measured separately from the gypsum and no contaminants were noted in any of the aliquots. Some basic and preliminary tests of signal stability were measured and found to be mitigated by lessening of pre-heat protocols. Ages ranged from 8 ka to 10 ka in the shallow cores and 16 ka to 22 ka in the deeper cores. These ages will be useful in determining rates of gypsum growth within a sequence of evaporates which, in turn, will help to better document historic rates of evaporation and thus estimate, with more precision, the corresponding annual evaporation rates.

Texas;New Mexico↗

USGS2014

Evaluation and prioritization of stream habitat monitoring in the Lower Columbia Salmon and Steelhead Recovery Domain as related to the habitat monitoring needs of ESA recovery plans

The lower Columbia River and its tributaries once supported abundant runs of salmon and steelhead; however, there are five species currently listed under the federal Endangered Species Act (ESA). The National Marine Fisheries Service has completed, and is proposing for adoption, a comprehensive ESA Recovery Plan for the Lower Columbia Evolutionarily Significant Units (ESUs) based on the recovery plans developed by Oregon and Washington. One of the primary factors attributed to the decline of these species is habitat degradation. There are numerous entities conducting status and/or trends monitoring of instream habitat in the lower Columbia River Basin, but because the programs were developed for agency specific reasons, the existing monitoring efforts are not well coordinated, and often lack the spatial coverage, certainty, or species coverage necessary to answer questions related to status and trends of the ESA listed populations. The Pacific Northwest Aquatic Monitoring Partnership’s Integrated Status and Trends Monitoring (ISTM) project was initiated to improve integration of existing and new monitoring efforts by developing recommendations for sampling frames, protocols, and data sharing. In an effort to meet the ISTM project goals, five objectives were identified: (1) identify and prioritize decisions, questions, and monitoring objectives, (2) evaluate how existing programs align with these management decisions, questions, and objectives, (3) identify the most appropriate monitoring design to inform priority management decisions, questions, and objectives, (4) use trade-off analysis to develop specific recommendations for monitoring based on outcomes of Objectives 1-3 and (5) recommend implementation and reporting mechanisms. This report summarizes the effort to address Objectives 1 and 2, detailing the commonalities among the habitat characteristics that all entities measure and monitor, and how the metrics align with the priorities listed in the comprehensive recovery plan for the Lower Columbia ESUs.

Report↗

USGS2011

A national-scale geochemical and mineralogical survey of soils of the conterminous United States

In 2007, the US Geological Survey initiated a low-density (1 site per 1600 km 2 , c. 4800 sites) geochemical and mineralogical survey of soils of the conterminous USA. The ideal sampling protocol at each site includes a sample from 0–5 cm depth, a composite of the soil A horizon, and a sample from the soil C horizon. The <2-mm fraction of each sample is analyzed for Al, Ca, Fe, K, Mg, Na, S, Ti, Ag, Ba, Be, Bi, Cd, Ce, Co, Cr, Cs, Cu, Ga, In, La, Li, Mn, Mo, Nb, Ni, P, Pb, Rb, Sb, Sc, Sn, Sr, Te, Th, Tl, U, V, W, Y and Zn by inductively coupled plasma-mass spectrometry and inductively coupled plasma-atomic emission spectrometry following a near-total digestion in a mixture of HCl, HNO 3 , HClO 4 and HF. Separate methods are used for As, Hg, Se and total C on this same size fraction. The major mineralogical components are determined by a quantitative X-ray diffraction method. Sampling was completed in 2010 with chemical and mineralogical analysis currently underway. Preliminary results for a swath from the central USA to Florida clearly show the effects of soil parent material and climate on the chemical and mineralogical composition of soils. A sample archive will be established and made available for future investigations.

Conterminous United States↗

USGS2024

Need and vision for global medium-resolution Landsat and Sentinel-2 data products

Global changes in climate and land use are threatening natural ecosystems, biodiversity, and the ecosystem services people rely on. This is why it is necessary to track and monitor spatiotemporal change at a level of detail that can inform science, management, and policy development. The current constellation of multiple Landsat and Sentinel-2 satellites collecting imagery at predominantly ≤ "> ≤ 30-m spatial resolution affords an opportunity for the generation of global medium- resolution products every few days. Our goal is to both identify the information needs and provide direction towards the generation of a suite of global, high-level, systematically-generated, medium-resolution products designed for both management and science. Our vision builds on the success of the NASA MODIS/VIIRS product suite, while recognizing the unique strengths of medium-resolution satellite data given their higher spatial resolution and longer time series. We propose a suite of 13 essential products that enable the characterization of the current state and changes in the biosphere, cryosphere, and hydrosphere, and would fill information needs identified by the Committee on Earth Observation Satellites for the Global Climate Observing System and the Global Terrestrial Observing System, by the National Research Council of the US National Academies in the decadal survey, and by others. These products are: land cover, land cover change, burned area, forest loss, vegetation indices, phenology, dynamic habitat indices, albedo, land surface temperature, snow cover, ice extent, surface water extent, and evapotranspiration. Furthermore, we provide a list of desirable products poised for addition to the essential products (e.g., crop type, emissivity, and ice sheet velocity). Lastly, we suggest aspirational products requiring further algorithm development (e.g., forest structure and crop yield). For the identified essential products, algorithms are in place, making it feasible to begin generating products systematically. These products should be accompanied by quality and accuracy assessments undertaken following consensus protocols. Five decades after the first Landsat satellite, and two decades after the MODIS products were first produced, it is time now for readily available, standardized, and consistent high-level products built upon medium-resolution imagery, thereby fulfilling the promise and the vision that inspired the Landsat program since its inception.

Remote Sensing of Environment↗

USGS2023

Influence of lamprey rearing type on measures of performance

Declines in populations of Pacific Lamprey (Entosphenus tridentatus) have raised concerns by the Columbia River tribes, who then initiated efforts to protect and restore them throughout their historical range. The Columbia River Inter-Tribal Fish Commission (CRITFC) devised a restoration plan for lamprey in the Columbia River Basin which highlights the significance of lamprey to the tribes and recommends conservation actions. The plan calls for the development of artificial propagation (AP) protocols to provide fish for research (e.g., downstream passage studies) and restoration activities (e.g., supplemental releases into streams/rivers). The ideal outcome of these efforts would be cultured fish that are comparable to the corresponding wild fish, and efforts are underway to conduct such evaluations in larval and juvenile lamprey. The CRITFC lamprey restoration plan lists improving dam passage for juvenile and larval lamprey as a high priority action. Active telemetry techniques have not been an option until recently, when a prototype micro acoustic transmitter was designed for small, elongate fishes like lamprey and eels. Passage survival studies of juvenile and larval lamprey using acoustic telemetry are now possible but are challenged with the limited availability of research animals. The use of AP fish would facilitate passage survival studies, under the assumption that AP juvenile and larval lamprey perform and survive comparably to the wild lamprey they are intended to represent. The current study was enacted to add to the growing knowledge of how reliably AP lamprey can be used as surrogates for wild lamprey. Study objectives were to: 1) compare the swimming ability of AP and wild juvenile lamprey implanted with the prototype micro acoustic transmitter and 2) compare the performance of AP and wild larval lamprey by evaluating night activity levels, burrowing ability, and photokinetic response to tail illumination over a period of 5-months in a culture setting. Evaluations of juvenile lamprey sustained swimming performance did not reveal any differences between tagged and untagged lamprey of AP or wild origin. We standardized the stage of transformation for all tested lamprey to minimize variation. Our tests were constrained by limited access to juvenile lamprey, so significant differences between rearing types may have gone undetected. More information on how rearing type influences other lamprey life stages and swimming performance will add to the growing knowledge on how reliably AP lamprey can serve as surrogates for wild lamprey. We compared AP and wild larval lamprey using three performance metrics, both shortly after they arrived at our laboratory and through a 5-month study period. Within the AP and wild test groups, we divided lamprey into small (30-70 mm total length) and large (80-120 mm total length) size categories, forming four test groups. Each of the test groups were comprised of 25 lamprey and were held in separate tanks. These tanks were the source of test fish for all performance testing. Our results for 2 of 3 of the performance metrics showed no differences between rearing types, and we found limited evidence to suggest that duration in a culture setting changed performance. Night activity levels were low for all test groups. Burrowing times were significantly different by rearing type, with wild lamprey burrowing faster than AP lamprey, in both the small and large size categories. These significant differences in rearing type could be a concern for use of AP lamprey for restoration or research needs, but they may not be biologically meaningful. Both AP and wild lamprey completed burrowing in median times of less than 1 min, which minimizes concerns about predation risk. Additional opportunities to evaluate burrowing performance of AP and wild larval lamprey would be helpful to inform future planned uses of AP lamprey. Finally, our evaluations of photokinetic response to tail illumination revealed similar proportions of AP and wild larvae moving in response to illumination, and no significant differences in response time between the groups. The wild lamprey, however, consistently had faster (but not significantly) response times than AP fish. This finding supports the significantly faster burrowing times we observed for wild lamprey compared to AP fish. Taken together, these lines of evidence raise some concerns for the ability of AP lamprey to serve as defensible surrogates for wild lamprey because the ability to reliably burrow is so critical for larvae. Burrowing performance and photokinetic response to tail illumination were both easy to measure and will be valuable metrics for evaluating rearing types in future studies.

Report↗

USGS2022

Permeability of methane hydrate-bearing sandy silts in the deep-water Gulf of Mexico (Green Canyon Block 955)

Permeability is one of the most crucial properties governing fluid flow in methane hydrate reservoirs. This paper presents a comprehensive permeability analysis of hydrate-bearing sandy silt pressure-cored from Green Canyon Block 955 (GC 955) in the deep-water Gulf of Mexico. We developed an experimental protocol to systematically characterize the transport and petrophysical properties in pressure cores. The in situ effective permeability ranges from 0.1 md (1.0 × 10 −16 m 2 ) to 2.4 md (2.4 × 10 −15 m 2 ) in these natural sandy silts cores with hydrate occupying 83%–93% of the pore space. When hydrate dissociates from these cores, the measured intrinsic permeability ( k 0 ) is 0.3 md (3.0 × 10 −16 m 2 ) to 9.3 md (9.3 × 10 −15 m 2 ); these results are affected by fines migration during hydrate dissociation. We analyzed samples reconstituted from these sandy silts and found k 0 to range from ∼12 md (∼1.2 × 10 −14 m 2 ) to ∼41 md (∼4.1 × 10 −14 m 2 ). The water relative permeabilities ( k rw ) of GC 955 pressure cores are large relative to other natural pressure cores from offshore Japan, offshore India, and onshore Alaska. These k rw values are also higher than predicted by current conceptual relative permeability models where hydrate fills the pores or coats the grains of the sediments. This fundamental conundrum requires further study. Our work provides essential parameters to reservoir simulation models seeking to predict hydrate formation in geological systems, evaluate the gas production potential, and explore the best way to produce this energy resource in sandy silt reservoirs.

Louisiana↗

USGS2012

History and progress of the North American Soil Geochemical Landscapes Project, 2001-2010

In 2007, the U.S. Geological Survey, the Geological Survey of Canada, and the Mexican Geological Survey initiated a low-density (1 site per 1600 km 2 , 13323 sites) geochemical and mineralogical survey of North American soils (North American Soil Geochemical Landscapes Project). Sampling and analytical protocols were developed at a series of workshops in 20032004 and pilot studies were conducted from 20042007. The ideal sampling protocol at each site includes a sample from 05 cm depth, a composite of the soil A horizon, and a sample from the soil C horizon. The <2-mm fraction of each sample is analyzed for Al, Ca, Fe, K, Mg, Na, S, Ti, Ag, Ba, Be, Bi, Cd, Ce, Co, Cr, Cs, Cu, Ga, In, La, Li, Mn, Mo, Nb, Ni, P, Pb, Rb, Sb, Sc, Sn, Sr, Te, Th, Tl, U, V, W, Y, and Zn by inductively coupled plasma-mass spectrometry and inductively coupled plasma-atomic emission spectrometry following a near-total digestion in a mixture of HCl, HNO 3 , HClO 4 , and HF. Separate methods are used for As, Hg, Se, and total C on this same size fraction. The major mineralogical components are determined by a quantitative X-ray diffraction method. Sampling in the conterminous U.S. was completed in 2010 (c. 4800 sites) with chemical and mineralogical analysis currently underway. In Mexico, approximately 66% of the sampling (871 sites) had been done by the end of 2010 with completion expected in 2012. After completing sampling in the Maritime provinces and portions of other provinces (472 sites, 7.6% of the total), Canada withdrew from the project in 2010. Preliminary results for a swath from the central U.S. to Florida clearly show the effects of soil parent material and climate on the chemical and mineralogical composition of soils. A sample archive will be established and made available for future investigations.

Earth Science Frontiers↗

USGS2023

Use of multiparameter instruments for routine field measurements

The “National Field Manual for the Collection of Water-Quality Data” (NFM) provides guidelines and procedures for U.S. Geological Survey (USGS) personnel who collect data used to assess the quality of the Nation’s surface-water and groundwater resources. This chapter, NFM A6.8, provides guidance and protocols for the use of multiparameter instruments for routine field measurements, which includes storage and maintenance of equipment, calibration, troubleshooting, and procedures for measurement and reporting. It updates and supersedes USGS Techniques of Water-Resources Investigations, book 9, chapter A6.8, version 1.1, by Jacob Gibs, Franceska D. Wilde, and Heather A. Heckathorn. The use of multiparameter instruments for conducting field measurements has become routine. The methods described here are specific to the use of multiparameter instruments. The field methods described in this chapter are applicable to most natural waters. Before 2017, the NFM chapters were released in the USGS Techniques of Water-Resources Investigations series. Effective in 2018, new and revised NFM chapters are being released in the USGS Techniques and Methods series; this series change does not affect the content and format of the NFM. More information is in the general introduction to the NFM (USGS Techniques and Methods, book 9, chapter A0) at https://doi.org/10.3133/tm9A0 . The authoritative current versions of NFM chapters are available in the USGS Publications Warehouse at https://pubs.er.usgs.gov/ . Comments, questions, and suggestions related to the NFM can be addressed to nfm@usgs.gov .

Techniques and Methods↗

USGS2006

Water-Quality Data for Selected National Park Units within the Southern Colorado Plateau Network, Arizona, Utah, Colorado, and New Mexico, Water Years 2005 and 2006

The National Park Service initiated a Level 1 Water-Quality Inventory program to provide water-quality data to park managers so informed natural resource management decisions could be made. Level 1 water-quality data were collected by the U.S. Geological Survey Arizona Water Science Center at 57 sites in 13 National Park units located in the Southern Colorado Plateau Inventory and Monitoring network in water years 2005 and 2006. These data describe the current water-quality at selected sites within the park units and provide information for monitoring future trends. Water samples were collected three times at each type of site including wells, springs, seeps, tinajas, rivers, a lake, and an irrigation ditch. Field measurements were taken at each site and they included pH, specific conductance, temperature, barometric pressure, dissolved oxygen, alkalinity, turbidity, and discharge rates where applicable. Water samples collected were sent to the U.S. Geological Survey National Water Quality Laboratory and analyzed for major ions, trace elements, and nutrients. The National Water Quality Laboratory also analyzed selected samples for mercury and petroleum hydrocarbons. Additional samples at selected sites were collected and analyzed for cyanide, radiochemistry, and suspended sediment by U.S. Geological Survey contract labs. Fecal-indicator bacteria (Escherichia coli) were sampled for at selected sites as another indicator of water quality. Quality control for this study was achieved through proper training of field personnel, use of standard U.S. Geological Survey field and laboratory protocols, collection of sample blanks and replicates, and a thorough review of the water-quality analyses. Measured field pH ranged from 6.0 to 8.8, within normal range for springs and rivers, at most sites. Concentrations of dissolved solids ranged from 48 to 8,680 mg/L and the majority of samples had concentrations of dissolved solids below 900 mg/L. Trace-element concentrations at most sites were at or near the laboratory reporting levels. The highest overall trace-element concentrations were found at U.S. Highway 160 Spring near Park Entrance to Mesa Verde National Park. Concentrations of uranium in samples at all sites ranged from below the detection limit to 55.7 ?g/L. Water samples from selected sites were analyzed for total petroleum hydrocarbons and concentrations of total petroleum hydrocarbons were at or above the laboratory detection limit in samples at six National Park units. Ten sites were sampled for Escherichia coli and positive counts were found at 9 out of the ten sites, the highest colony counts were found at Chinle Creek at Chinle, AZ in Canyon de Chelly National Monument. Measured concentrations of dissolved ammonia, nitrite, and nitrate were at or near laboratory reporting levels at most sites; nitrate concentrations ranged from below the reporting limit (0.047 mg/L) to 9.77 mg/L. Samples that were analyzed for mercury had concentrations below or at the laboratory reporting level. Concentrations of cyanide were less than the laboratory reporting level for all samples except two, Spruce Tree House Spring in Mesa Verde National Park and Pine Tree Canyon Tinaja in Canyon de Chelly National Monument, which had average concentrations of .042 and .011 ?g/L respectively. Gross alpha/beta radioactivity counts were below the U.S. Environmental Protection Agency maximum contaminant level except for samples from Casa Chiquita Well Middle at Chaco Culture National Historical Park which averaged 35 pCi/L. Suspended-sediment concentrations were variable and ranged from 10 to 150,000 mg/L.

Open-File Report↗

USGS2023

Guidelines for field-measured water-quality properties

The “National Field Manual for the Collection of Water-Quality Data” (NFM) provides guidelines and procedures for U.S. Geological Survey (USGS) personnel who collect data used to assess the quality of the Nation’s surface-water and groundwater resources. This chapter, NFM A6.0, provides guidance and protocols for the measurement of field parameters on site, which include the selection of sites and methods for measurement in groundwater and surface water and procedures for measurement and reporting. It updates and supersedes USGS Techniques of Water-Resources Investigations, book 9, chapter A6.0, version 2.0, by Franceska D. Wilde. Field parameters are routinely measured when water samples are collected, are often measured continually at USGS streamgages, and are regularly measured during laboratory and field experiments. The field methods for measuring field parameters described in this chapter are applicable to most natural waters. Before 2017, the NFM chapters were released in the USGS Techniques of Water-Resources Investigations series. Effective in 2018, new and revised NFM chapters are being released in the USGS Techniques and Methods series; this series change does not affect the content and format of the NFM. More information is in the general introduction to the NFM (USGS Techniques and Methods, book 9, chapter A0) at https://doi.org/10.3133/tm9A0 . The authoritative current versions of NFM chapters are available in the USGS Publications Warehouse at https://pubs.er.usgs.gov/ . Comments, questions, and suggestions related to the NFM can be addressed to nfm@usgs.gov .

Techniques and Methods↗