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USGS1996

Salinity in the Colorado River in the Grand Valley, western Colorado, 1994-95

Salinity, or the dissolved-solids concentration, is the measure of salts such as sodium chloride, calcium bicarbonate, and calcium sulfate that are dissolved in water. About one-half of the salinity in the Colorado River Basin is from natural sources (U.S. Department of the Interior, 1995), such as thermal springs in the Glenwood-Dotsero area, located about 90 miles upstream from Grand Junction (fig. 1). Effects of human activities, such as irrigation, reservoir evaporation, and transbasin diversions, have increased the levels of salinity in the Colorado River. High salinity can affect industrial and municipal water users by causing increased water-treatment costs, increased deterioration of plumbing and appliances, increased soap needs, and undesirable taste of drinking water. High salinity also can cause lower crop yields by reducing water and nutrient uptake by plants and can increase agricultural production costs because of higher leaching and drainage requirements. Agricultural losses might occur when salinity reaches about 700?850 milligrams per liter (U.S Department of the Interior, 1994). Figure 1. Irrigated area in the Grand Valley and locations of sampling sites for the 1994?95 salinity study of the Colorado River. The Colorado River is the major source of irrigation water to the Grand Valley (fig. 1) and also is one source of water for the Clifton Water District, which supplies domestic water to part of the eastern Grand Valley. During spring and early summer in 1994, the Colorado River in the Grand Valley had lower than average streamflow. There was concern by water users about the effect of this low streamflow on salinity in the river. In 1994, the U.S. Geological Survey (USGS), in cooperation with the Colorado River Water Conservation District, began a study to evaluate salinity in the Colorado River. This fact sheet describes results of that study. The specific objectives of the fact sheet are to (1) compare salinity in the Colorado River among different locations from Cameo to the Colorado-Utah State line, (2) assess variations in salinity for different times of the year, and (3) describe the relation between streamflow and salinity in the river.

Colorado↗

USGS2006

Flood of May 23, 2004, in the Turkey and Maquoketa River basins, northeast Iowa

Severe flooding occurred on May 23, 2004, in the Turkey River Basin in Clayton County and in the Maquoketa River Basin in Delaware County following intense thunderstorms over northeast Iowa. Rain gages at Postville and Waucoma, Iowa, recorded 72-hour rainfall of 6.32 and 6.55 inches, respectively, on May 23. Unofficial rainfall totals of 8 to 10 inches were reported in the Turkey River Basin. The peak discharge on May 23 at the Turkey River at Garber streamflow-gaging station was 66,700 cubic feet per second (recurrence interval greater than 500 years) and is the largest flood on record in the Turkey River Basin. The timing of flood crests on the Turkey and Volga Rivers, and local tributaries, coincided to produce a record flood on the lower part of the Turkey River. Three large floods have occurred at the Turkey River at Garber gaging station in a 13-year period. Peak discharges of the floods of June 1991 and May 1999 were 49,900 cubic feet per second (recurrence interval about 150 years) and 53,900 cubic feet per second (recurrence interval about 220 years), respectively. The peak discharge on May 23 at the Maquoketa River at Manchester gaging station was 26,000 cubic feet per second (recurrence interval about 100 years) and is the largest known flood in the upper part of the Maquoketa River Basin.

Iowa↗

USGS2006

Water and sediment quality of the Yukon River and its tributaries, from Eagle to St. Marys, Alaska, 2002-2003

The Yukon River basin is a vast and diverse ecosystem covering more than 330,000 square miles, an area larger than Texas. Approximately 126,000 people live within the basin and depend on the Yukon River and its tributaries for drinking water, commerce, and recreational and subsistence fish and game resources. Much of the Yukon River basin is underlain by permafrost containing vast amounts of organic carbon and nutrients. Recent climatic warming of the basin has resulted in lengthening of the growing season, melting of permafrost, deepening of the soil active layer, drying of upland soils, and shrinking of wetlands. These mostly terrestrial effects also affect the hydrology of the basin, changing the timing, magnitude, and fate of water and dissolved and particulate materials delivery to the Yukon River and its tributaries. As permafrost melts, stored carbon and nutrients are expected to become available for decomposition by soil organisms or for export downstream and to the Bering Sea. Such changes can have numerous, far-reaching effects on the ecosystem, including increased emission of greenhouse gases such as carbon dioxide and methane; changes in stream productivity, including salmon populations; changes in the productivity and chemistry of the Bering Sea; and increased fire frequency. One important question is whether organic carbon export to rivers will increase or decrease downstream from large wetland areas presently having substantial carbon storage, such as Yukon Flats. Because very few historical water-quality data are available for the Yukon River basin, scientists are unable to quantitatively assess potential effects of climate warming on aquatic ecosystems in the basin. In order to address these concerns, the U.S. Geological Survey conducted a comprehensive baseline water-quality characterization of the Yukon River and its major tributaries during 2000-05. The study included frequent water-quality sampling at a fixed-site network. In addition to the fixed-site sampling, intensive synoptic sampling of tributaries draining directly into the Yukon River was conducted along its entire length. This report contains observations of water and sediment quality made in the Yukon River basin during the synoptic sampling cruises in years 2002 and 2003. Chemical and biological data are presented for the Yukon River and its major tributaries between the towns of Eagle and St. Marys, Alaska.

Open-File Report↗

USGS2009

Channel morphology and bed sediment characteristics before and after habitat enhancement activities in the Uridil Property, Platte River, Nebraska, water-years 2005-2008

Fluvial geomorphic data were collected by the United States Geological Survey from July 2005 to June 2008 (a time period within water years 2005 to 2008) to monitor the effects of habitat enhancement activities conducted in the Platte River Whooping Crane Maintenance Trust’s Uridil Property, located along the Platte River, Nebraska. The activities involved the removal of vegetation and sand from the tops of high permanent islands and the placement of the sand into the active river channel. This strategy was intended to enhance habitat for migratory water birds by lowering the elevations of the high islands, thereby eliminating a visual obstruction for roosting birds. It was also thought that the bare sand on the lowered island surfaces could serve as potential habitat for nesting water birds. Lastly, the project supplied a local source of sediment to the river to test the hypothesis that this material could contribute to the formation of lower sandbars and potential nesting sites downstream. Topographic surveys on the islands and along river transects were used to quantify the volume of removed sand and track the storage and movement of the introduced sand downstream. Sediment samples were also collected to map the spatial distribution of river bed sediment sizes before and after the management activities. While the project lowered the elevation of high islands, observations of the sand addition indicated the relatively fine-grained sand that was placed in the active river channel was rapidly transported by the flowing water. Topographic measurements made 3 months after the sand addition along transects in the area of sediment addition showed net aggradation over measurements made in 2005. In the year following the sand addition, 2007, elevated river flows from local rain events generally were accompanied by net degradation along transects within the area of sediment addition. In the spring of 2008, a large magnitude flow event of approximately 360 cubic meters per second occurred in the study reach and was accompanied by net aggradation in the managed area. These observations illustrate the high sediment transport capacity of the river channel both at lower flows, when the sand was added, and during higher flow events. This field experiment also serves as a practical example of the dynamic response of a Platte River channel to a relatively small-scale sand augmentation project directed toward enhancing in-channel habitat for avian species.

Nebraska↗

USGS2010

Channel Maintenance and Flushing Flows for the Klamath River Below Iron Gate Dam, California

The Klamath River is a major river in northern California and southern Oregon. Iron Gate Dam divides the river into the two subunits where there is a significant change in utilization of the river. Downstream of Iron Gate Dam, the river is very important for the propagation of salmon. To address concerns relating to substrate conditions in the mainstem Klamath River below Iron Gate Dam, the Arcata, California, office of the U.S. Fish and Wildlife Service contracted with the U.S. Geological Survey (USGS) to determine flushing flows required to improve and maintain quality spawning and rearing habitats for salmon, and to reduce the abundance of preferred habitats of the polychaete worm suspected of being the intermediate host for Ceratomyxa shasta, a species of bacteria that infects fish. Historically, the river has had the capacity to move sediment just below Iron Gate Reservoir, but there have been periods when the capacity was very low. The results indicate that if the future is more like the pre-1961 period (low transport capacity) than the more recent period, there will be significant sediment issues in the Klamath River below Iron Gate Dam. It seems that during normal or wet years, winter months, and periods of high flow, sediments are flushed either downstream or deposited on higher surfaces. The recent drought conditions during 2000-2005 probably resulted in extensive fine-grained sedimentation along the river, which in turn may have caused increased establishment of aquatic vegetation and increased concentrations of C. shasta. It appears that releases from Iron Gate Dam as far downstream as Seiad Valley are important in maintaining flow conditions to flush the fines and clean the gravels in the river during summer months, or during drought years. Sediment transport studies indicate that supplemental flows during dry or drought conditions may provide some flushing flows in reaches downstream of the dam. For purposes of flushing fine sediments during drought years or dry summer months, flows in the range of 2,500-5,000 cubic feet per second during a period of days may be necessary. Providing these types of flows in a manner similar to a storm pulse would provide the best opportunity to flush the fines and clean some of the gravels given the upper ranges of flows are achieved.

Open-File Report↗

USGS2010

Assessing survival of Mid-Columbia River released juvenile salmonids at McNary Dam, Washington, 2008-09

Few studies have evaluated survival of juvenile salmon over long river reaches in the Columbia River and information regarding the survival of sockeye salmon at lower Columbia River dams is lacking. To address these information gaps, the U.S. Geological Survey was contracted by the U.S. Army Corps of Engineers to evaluate the possibility of using tagged fish released in the Mid-Columbia River to assess passage and survival at and downstream of McNary Dam. Using the acoustic telemetry systems already in place for a passage and survival study at McNary Dam, fish released from the tailraces of Wells, Rocky Reach, Rock Island, Wanapum, and Priest Rapids Dams were detected at McNary Dam and at the subsequent downstream arrays. These data were used to generate route-specific survival probabilities using single-release models from fish released in the Mid-Columbia River. We document trends in passage and survival probabilities at McNary Dam for yearling Chinook and sockeye salmon and juvenile steelhead released during studies in the Mid-Columbia River. Trends in the survival and passage of these juvenile salmonid species are presented and discussed. However, comparisons made across years and between study groups are not possible because of differences in the source of the test fish, the type of acoustic tags used, the absence of the use of passive integrated transponder tags in some of the release groups, differences in tagging and release protocols, annual differences in dam operations and configurations, differences in how the survival models were constructed (that is, number of routes that could be estimated given the number of fish detected), and the number and length of reaches included in the analysis (downstream reach length and arrays). Despite these differences, the data we present offer a unique opportunity to examine the migration behavior and survival of a group of fish that otherwise would not be studied. This is particularly true for sockeye salmon because little information is available about their survival as they pass hydroelectric dams in the lower Columbia River. Collecting information on fish released in the Mid-Columbia River, as well as on fish released 8 kilometers upstream of McNary Dam, allowed us to evaluate similarities and differences in passage and survival probabilities. In general, juvenile salmonids released in the Mid-Columbia River and detected at and downstream of McNary Dam showed trends in passage and survival probabilities that were similar to fish released 8 kilometers upstream of McNary Dam. This suggests that increased migration time or length of migration had little effect on behavior and survival of Mid-Columbia River released juvenile salmonids detected at McNary Dam.

Open-File Report↗

USGS2011

The effects of sediment and mercury mobilization in the South Yuba River and Humbug Creek confluence area, Nevada County, California: Concentrations, speciation, and environmental fate – Part 1: Field characterization

Millions of pounds of mercury (Hg) were deposited in the river and stream channels of the Sierra Nevada from placer and hard-rock mining operations in the late 1800s and early 1900s. The resulting contaminated sediments are relatively harmless when buried and isolated from the overlying aquatic environment. The entrained Hg in the sediment constitutes a potential risk to human and ecosystem health should it be reintroduced to the actively cycling portion of the aquatic system, where it can become methylated and subsequently bioaccumulated in the food web. Each year, sediment is mobilized within these fluvial systems during high stormflows, transporting hundreds of tons of Hg-laden sediment downstream. The State of California and resource-management agencies, including the Bureau of Land Management (BLM) and the U.S. Forest Service, are concerned about additional disturbances, such as from suction gold dredging activities, which have the potential to mobilize Hg associated with buried sediment layers elevated in Hg that are otherwise likely to remain buried under normal storm conditions. The BLM initiated a study looking at the feasibility of removing Hg-contaminated sediment at the confluence of the South Yuba River and Humbug Creek in the northern Sierra Nevada of California by using standard suction-dredge technology. Additionally, the California State Water Resources Control Board (SWRCB) supported a comprehensive characterization of the intended dredge site. Together, the BLM and SWRCB supported a comprehensive characterization of Hg contamination at the site and the potential effects of sediment disturbance at locations with historical hydraulic mining debris on downstream environments. The comprehensive study consisted of two primary components: field studies and laboratory experiments. The field component, described in this report, had several study elements: 1) a preliminary, smallscale, in-stream dredge test; 2) comprehensive characterization of grain size distribution, Hg speciation, and mineralogy of bed and suspended sediment; 3) a determination of the past and current sources of sediment in the study area; 4) an assessment of Hg bioaccumulation in the local invertebrate population; and 5) a comparison of potential Hg transport caused by natural storm disturbances with potential Hg mobilization caused by suction dredging as a method of Hg removal at the study site. The laboratory component of the study assessed the potential influence of the disturbance of Hg-contaminated sediment through experiments designed to simulate in-stream transport, deposition, and potential methylation of Hg, described in a companion report (see Marvin-DiPasquale and others, 2011). Results of the field studies indicate that the fine-grained fraction (silt-clay, less than 0.063 millimeters) contains the greatest concentration of Hg in contaminated sediment. Because the fine-grained fraction is the most susceptible to longrange fluvial transport, disturbance of Hg-contaminated sediment is likely to increase the concentration and load of Hg in downstream waters. The preliminary, small-scale dredge test showed an increase in the concentration of fine particles and Hg in the water column caused by the dredge activity, despite relatively low concentrations of fine particles and Hg (about 300 nanograms per gram) at the dredge site. Characterization of sediment from two test pits and other sites in the vicinity of the confluence of the South Yuba River and Humbug Creek revealed a highly variable distribution of fine- and coarse-grained sediment. The highest levels of Hg contamination (up to 11,100 ng/g) were associated with the fine-grained fraction of sediment from the bedrock contact zone of Pit 2, a horizon which also yielded grains of gold and gold-Hg amalgam. A closed-circuit tank experiment with a venturi dredge at the base of Pit 1, in a gravel bar within the South Yuba River, resulted in fine-grained suspended sediment remaining in suspension more than 40 hours following the disturbance simulation. Although the volumetric concentration of Hg declined over time as particles settled out, the concentration of Hg on the suspended particles increased over time as the suspended material became finer grained, because Hg is preferentially adsorbed on to clay-sized particles. Mineralogical and chemical analyses indicated that the buried fine-grained material with the greatest Hg contamination was derived from hydraulic mining debris, which consist primarily of Eocene gravels mined in the Malakoff Diggins, North Bloomfield, and Lake City areas within the South Yuba River watershed. Coarse material and more recently deposited sediment were derived primarily from upstream sources on the South Yuba River. The biota assessment indicated that invertebrate taxa collected from all sites on the South Yuba River in 2007, including lower Humbug Creek, had elevated concentrations of total mercury (THg) and methylmercury (MeHg) compared to a reference site on the Bear River, upstream of mining effects. Differences with the reference site were less pronounced in 2008 when a significant reduction in MeHg concentrations was observed in biota across all taxa from concentrations in 2007. It is possible that the inter-annual variation was related to the fact that suction dredging was active in the South Yuba River in 2007 but not in 2008 when a local moratorium was imposed by the BLM. There were significant variations among taxa for both THg and MeHg concentrations, with the water striders (Gerridae) having the highest concentrations of both THg and MeHg; variation among sites was not as strong as between years or among taxa. These results suggest that additional monitoring would be helpful to investigate the possible linkage between variations in MeHg bioaccumulation and levels of suction dredge activity in areas of historical gold mining. Results from the field studies indicate that disturbance of the finegrained Hg-contaminated sediment would likely lead to enhanced mobilization of Hg to downstream environments; therefore, the use of suction dredging to remove Hg at the South Yuba River and Humbug Creek confluence area would likely result in enhanced Hg transport downstream relative to natural conditions.

California↗

USGS2013

Characterization of mercury contamination in the Androscoggin River, Coos County, New Hampshire

The former chloralkali facility in Berlin, New Hampshire, was designated a Superfund site in 2005. Historic paper mill activities resulted in the contamination of groundwater, surface water, and sediments with many organic compounds and mercury (Hg). Hg continues to seep into the Androscoggin River in elemental form through bedrock fractures. The objective of this study was to spatially characterize (1) the extent of Hg contamination in water, sediment, and biota; (2) Hg speciation and methylmercury (MeHg) production potential rates in sediment; (3) the availability of inorganic divalent Hg (Hg(II)) for Hg(II)-methylation (MeHg production); and (4) ancillary sediment geochemistry necessary to better understand Hg speciation and MeHg production potential rates in this system. Concentrations of total mercury (THg) and MeHg in sediment, pore water, and biota in the Androscoggin River were elevated downstream from the former chloralkali facility compared with those upstream from reference sites. Sequential extraction of surface sediment showed a distinct difference in Hg speciation upstream compared with downstream from the contamination site. An upstream site was dominated by potassium hydroxide-extractable forms (for example, organic-Hg or particle-bound Hg(II)), whereas sites downstream from the point source were dominated by more chemically recalcitrant forms (largely concentrated nitric acid-extractable), indicative of elemental mercury or mercurous chloride. At all sites, only a minor fraction (less than 0.1 percent) of THg existed in chemically labile forms (for example, water extractable or weak acid extractable). All metrics indicated that a greater percentage of mercury at an upstream site was available for Hg(II)-methylation compared with sites downstream from the point source, but the absolute concentration of bioavailable Hg(II) was greater downstream from the point source. In addition, the concentration of tin-reducible inorganic reactive mercury, a surrogate measure of bioavailable Hg(II) generally increased with distance downstream from the point source. Whereas concentrations of mercury species on a sediment-dry-weight basis generally reflected the relative location of the sample to the point source, river-reach integrated mercury-species inventories and MeHg production potential (MPP) rates reflected the amount of fine-grained sediment in a given reach. THg concentrations in biota were significantly higher downstream from the point source compared with upstream reference sites for smallmouth bass, white sucker, crayfish, oligochaetes, bat fur, nestling tree swallow blood and feathers, adult tree swallow blood, and tree swallow eggs. As with tin-reducible inorganic reactive mercury, THg in smallmouth bass also increased with distance downstream from the point source. Toxicity tests and invertebrate community assessments suggested that invertebrates were not impaired at the current (2009 and 2010) levels of mercury contamination downstream from the point source. Concentrations of THg and MeHg in most water and sediment samples from the Androscoggin River were below U.S. Environmental Protection Agency (USEPA), the Canadian Council of Ministers of the Environment, and probable effects level guidelines. Surface-water and sediment samples from the Androscoggin River had similar THg concentrations but lower MeHg concentrations compared with other rivers in the region. Concentrations of THg in fish tissue were all above regional and U.S. Environmental Protection Agency guidelines. Moreover, median THg concentrations in smallmouth bass from the Androscoggin River were significantly higher than those reported in regional surveys of river and streams nationwide and in the Northeastern United States and Canada. The higher concentrations of mercury in smallmouth bass suggest conditions may be more favorable for Hg(II)-methylation and bioaccumulation in the Androscoggin River compared with many other rivers in the United States and Canada.

New Hampshire↗

USGS2016

2014 annual summary of the lower Gunnison River Basin Selenium Management Program water-quality monitoring, Colorado

Dissolved-selenium loading analyses of data collected at 18 water-quality sites in the lower Gunnison River Basin in Colorado were completed through water year (WY) 2014. A WY is defined as October 1–September 30. Selenium is a trace element that bioaccumulates in aquatic food chains and can cause reproductive failure, deformities, and other harmful effects. This report presents information on the dissolved-selenium loads at 18 sites in the lower Gunnison River Basin for WYs 2011–2014. Annual dissolved-selenium loads were calculated at 5 sites with continuous U.S. Geological Survey (USGS) streamflow gages, whereas instantaneous dissolved-selenium loads were calculated for the remaining 13 sites using water-quality samples that had been collected periodically during WYs 2011–2014. Annual dissolved-selenium loads for WY 2014 ranged from 336 pounds (lb) at Uncompahgre River at Colona to 13,300 lb at Gunnison River near Grand Junction (Whitewater). Most sites in the basin had a median instantaneous dissolved-selenium load of less than 20.0 lb per day. In general, dissolved-selenium loads at Gunnison River main-stem sites showed an increase from upstream to downstream. The State of Colorado water-quality standard for dissolved selenium of 4.6 micrograms per liter (µg/L) was compared to the 85th percentiles for dissolved selenium at selected water-quality sites. Annual 85th percentiles for dissolved selenium were calculated for the five core USGS sites having streamflow gages using estimated dissolved-selenium concentrations from linear regression models. These annual 85th percentiles in WY 2014 ranged from 0.97 µg/L at Uncompahgre River at Colona to 16.7 µg/L at Uncompahgre River at Delta. Uncompahgre River at Delta and Whitewater were the only core sites where water samples exceeded the State of Colorado water-quality standard for dissolved selenium of 4.6 µg/L. Instantaneous 85th percentiles for dissolved selenium were calculated for sites with sufficient data using water-quality samples collected during WYs 2011–2014. The instantaneous 85th percentiles for samples for WY 2014 ranged from 1.1 µg/L at Uncompahgre River at Colona to 125 µg/L at Loutzenhizer Arroyo at North River Road. A trend analysis was completed for Whitewater to determine if dissolved-selenium loads are increasing or decreasing. The trend analysis indicates a decrease of 8,000 lb from WY 1986 to WY 2014, a 34.8 percent reduction during the time period, and an additional 6.2 percent reduction from a reported 28.6 percent reduction during WYs 1986–2008. The trend analysis for WY 1992 to WY 2014 indicates a decrease of 5,800 lb per year, or 27.9 percent.

Colorado↗

USGS2017

Colorado River fish monitoring in Grand Canyon, Arizona; 2002–14 humpback chub aggregations

The humpback chub ( Gila cypha ) is an endangered cyprinid species endemic to the Colorado River. The largest remaining population of the species spawns and rears in the Little Colorado River in Grand Canyon. Construction and operation of Glen Canyon Dam has altered the main-stem Colorado River in Glen and Grand Canyons. Cold, clear water releases from the dam result in a river that is generally unsuitable for successful humpback chub reproduction. During the early 1990s, nine locations within the main-stem Colorado River were identified as humpback chub aggregations—areas with a consistent and disjunct group of fish with no significant exchange of individuals with other aggregations. We monitored main-stem Colorado River aggregations of humpback chub in Grand Canyon during 2010 to 2014 and compared our results to previous investigations. Relative abundance, as described by catch per unit effort (fish per hour) of adult humpback chub at most main-stem aggregations, generally increased from the 1990s to 2014. In addition, distribution of humpback chub in the main-stem Colorado River has increased since the 1990s. Movement of humpback chub between the Little Colorado River and other aggregations likely adds fish to those aggregations. There is clear evidence of reproduction near the 30-Mile aggregation, and reproduction at Middle Granite Gorge and downstream seems likely based on catches of gravid fish and captures of very young fish, especially during relatively warm water releases from Glen Canyon Dam, 2004 to 2011. Humpback chub relative abundance at Shinumo and Havasu Creek inflows increased following translocations of young humpback chub starting in 2009. In light of this information, we modify the original nine aggregations, combining two previously separate aggregations and dropping two locations to form six distinct aggregations of humpback chub. Trends in humpback chub abundance at main-stem aggregations, relative to management actions (for example, translocations) or changing environmental conditions (for example, river warming), informs management of the species across a riverscape scale within the Colorado River.

Colorado↗

USGS2019

Application of the Stream Salmonid Simulator (S3) to Klamath River fall Chinook salmon (Oncorhynchus tshawytscha), California—Parameterization and calibration

Executive Summary In this report, we describe application of the Stream Salmonid Simulator (S3) to Chinook salmon ( Oncorhynchus tshawytscha ) in the Klamath River between Keno Dam in southern Oregon and the ocean in northern California. S3 is a deterministic life-stage-structured population model that tracks daily growth, movement, and survival of juvenile salmon. It can track different source populations or species, such as major tributary populations that enter a river like the Klamath River. A key theme of the model is that river flow affects habitat availability and capacity, which in turn drives density-dependent population dynamics. To explicitly link population dynamics to habitat quality and quantity, the river environment is constructed as a one-dimensional series of linked habitat units, each of which has an associated daily time series of discharge, water temperature, and useable habitat area or carrying capacity. In turn, the physical characteristics of each habitat unit and the number of fish occupying each unit affect survival and growth within each habitat unit and movement of fish among habitat units. The physical template of the Klamath River was formed by classifying the river into 2,635 mesohabitat units composed of runs, riffles, and pools. This template enabled modeling of the unimpounded Klamath River between the Keno Dam (the uppermost of four dams) and Iron Gate Dam (the lowermost dam) to address dam-removal scenarios. However, in this report, our focus was on parameterizing and calibrating the model under existing conditions, which included 1,706 discrete habitat units over the 312-kilometer (km) section of river between Iron Gate Dam and the ocean. For each habitat unit, we developed a time series of daily flow, water temperature, and amount of available habitat (weighted usable habitat area [WUA]) for spawners, fry, and parr. WUA time series were constructed using habitat suitability criteria for Chinook salmon applied to eight two-dimensional (2-D) hydrodynamic models that represented the geomorphic variability in habitat across the Klamath River. Results from the 2-D models were then extrapolated to unmodeled habitat units by scaling WUA curves for changes in habitat unit length and width. These variables were then used to drive population dynamics such as egg development and survival and juvenile movement, growth, and survival.

California, Oregon↗

USGS2020

Assessment of dissolved-selenium concentrations and loads in the Lower Gunnison River Basin, Colorado, as part of the Selenium Management Program, 2011–17

The Gunnison Basin Selenium Management Program implemented a water-quality monitoring network in 2011 to measure concentrations of selenium in the lower Gunnison River Basin in Colorado. Selenium is a trace element that bioaccumulates in aquatic food chains. Selenium is essential for life, but elevated amounts can cause reproductive failure, deformities, and other harmful effects. The primary goal of the Selenium Management Program is to meet the State of Colorado water-quality standard of 4.6 micrograms per liter (µg/L) for dissolved selenium at the U.S. Geological Survey (USGS) streamflow-gaging station number 09152500—Gunnison River near Grand Junction, Colorado—herein referred to as “Whitewater.” The U.S. Geological Survey, in cooperation with the Bureau of Reclamation, has completed a review of dissolved-selenium data collected from the Selenium Management Program network during Water Year (WY) 2017 (October 1, 2016 through September 30, 2017) to further the understanding of the status and trends of selenium in the basin. This report presents the percentile values for selenium because regulatory agencies in Colorado make decisions based on the U.S. Environmental Protection Agency’s Clean Water Act section 303(d), which uses percentile values for concentrations. Also presented are dissolved-selenium loads at 14 sites in the lower Gunnison River Basin for WYs 2011–17. Annual dissolved-selenium loads were calculated for six sites with continuous U.S. Geological Survey streamflow-gaging stations. These six sites are referred to as “core” sites in this report. The remaining sites, which do not have streamflow-gaging stations, are referred to as “ancillary” sites in this report. During WY 2017, the loads calculated at the six core sites ranged from 306 pounds (lb) at Uncompahgre River at Colona to 12,600 lb at Whitewater, respectively. By using discrete water-quality samples and the associated discharge measurements, instantaneous loads were calculated for 14 sites in WYs 2011–17 where discrete water-quality sampling took place. Median instantaneous loads ranged from 0.52 pounds per day (lb/d) at Uncompahgre River at Colona to 35.7 lb/d at Whitewater. Mean instantaneous loads ranged from 0.63 lb/d at Cummings Gulch at mouth to 35.5 lb/d at Whitewater. Most tributary sites in the basin had a median instantaneous dissolved-selenium load of less than 20.0 lb/d. In general, dissolved-selenium loads at Gunnison River main-stem sites showed an increase from upstream to downstream. The State of Colorado’s water-quality standard for dissolved selenium of 4.6 µg/L was compared to the 85th percentiles for dissolved selenium at selected sites. Annual 85th percentiles for dissolved selenium were calculated by using estimated dissolved-selenium concentrations from linear regression models for the six core sites with U.S. Geological Survey streamflow-gaging stations. The 85th-percentile concentrations for WY 2017 based on this method ranged from 0.68 µg/L at Uncompahgre River at Colona to 140 µg/L at Loutzenhizer Arroyo at North River Road. The 85th percentiles for concentrations of dissolved selenium also were calculated from water-quality samples collected during WY 2017 from sites with sufficient data. The annual 85th-percentile concentrations based on the discrete samples ranged from 0.75 µg/L at Uncompahgre River at Colona to 106 µg/L at Loutzenhizer Arroyo at North River Road. An analysis was completed for Whitewater to determine if an upward or downward trend exists for dissolved-selenium loads during two time periods. The first time period included all data at Whitewater, whereas the second time period focused on more recent data. The trend analysis indicates a decrease from 22,200 to 12,600 lb, which is a 43.1 percent (9,600 lb) reduction during the time period WY 1986 through WY 2017. The trend analysis for the annual dissolved-selenium load for WY 1995 through WY 2017 indicates a decrease of 6,600 lb per year, or 35.5 percent. An evaluation of laboratory bias was completed for selenium data which was used in the trend analysis. Findings indicated a potential positive bias of approximately 12 percent may exist in the data from October 2005 through August 2015.

Colorado↗

USGS2025

Evaluating deterrent locations and sequence in the Tennessee and Cumberland Rivers and the Tennessee–Tombigbee Waterway to minimize invasive carp occupancy and abundance

Invasive carps, specifically silver carp ( Hypophthalmichthys molitrix ), bighead carp ( H . nobilis ), grass carp ( Ctenopharyngodon idella ), and black carp ( Mylopharyngodon piceus ), have proliferated in the Mississippi River Basin owing to escapes from aquaculture facilities and intentional releases. In the Water Resources and Development Act (WRDA) of 2020 Sec. 509, Congress directed the U.S. Army Corps of Engineers to work with the Tennessee Valley Authority and other relevant agencies with deterrent projects to implement as many as 10 deterrent projects intended to manage and prevent the spread of invasive carp in the Tennessee and Cumberland River subbasins. The WRDA was amended in 2022 to include that at least one location must be situated on the Tennessee–Tombigbee Waterway. This report documents a structured decision-making process that engaged State and Federal agencies to evaluate alternative deterrent site sequences at specified lock and dam complexes on the Tennessee River, Cumberland River, and the Tennessee–Tombigbee Waterway. State and Federal agencies participated in a series of virtual and face-to-face meetings to structure the problem, expand the models used in previous decision analyses for the Tennessee River, and define management objectives. Potential deterrent sites were restricted to the downstream locations on the Tennessee River ( n =3), Cumberland River ( n =2), and the Tennessee–Tombigbee Waterway ( n =10). Only considering 15 sites allowed all feasible deterrent site combinations and sequences to be evaluated. Invasive carp relative abundance was projected for the Tennessee River, Cumberland River, and Tennessee–Tombigbee Waterway management units for 20 years using a simulation model. The deterrent site sequences were ranked based on the system-level invasive carp relative abundance and distribution in year 20. The unique downstream expansion of invasive carp through the Tennessee–Tombigbee Waterway was important to the interest group, but downstream movement rates were unknown; therefore, several downstream movement rates were evaluated, and the outcomes were used to rank deterrent site sequences. Additionally, the analysis incorporated two scenarios involving the retention and removal of an experimental deterrent at Barkley Lock on the Cumberland River. The results of the deterrent site sequences varied among downstream movement rates, with Tennessee–Tombigbee Waterway deterrent locations installed earlier in highly ranked sequences with increasing downstream movement rates. This analysis was time-limited owing to agency needs and represents Phase 1 of this project. Phase 2 expands Phase 1 to address additional uncertainties and more holistic management objectives and strategies.

Alabama, Georgia, Kentucky, Mississippi, Tennessee↗

USGS1947

Geologic features of dam sites in the Nehalem, Rogue, and Willamette River basins, Oregon, 1935-37

The present report comprises brief descriptions of geologic features at 19 potential dam sites in the Nehalem, Rogue, and Willamette River basins in western Oregon. The topography of these site and of the corresponding reservoir site was mapped in 1934-36 under an allocation of funds, by the Public Works Administration for river-utilization surveys by the Conservation Branch of the United States Geological Survey. The field program in Oregon has been under the immediate charge of R. O. Helland. The 19 dam sites are distributed as follows: three on the Nehalem River, on the west or Pacific slope of the Oregon Coast range; four on Little Butte Creek and two on Evans Creek, tributaries of the Rogue River in the eastern part of the Klamath Mountains; four on the South and Middle Santiam Rivers, tributaries of the Willamette River from the west slope of the Cascade mountains; and six on tributaries of the Willamette River from the east slope of the Coast Range. Except in the Evans Creek basin, all the rocks in the districts that were studied are of comparatively late geological age. They include volcanic rocks, crystalline rocks of several types, marine and nonmarine sedimentary rocks, and recent stream deposits. The study of geologic features has sought to estimate the bearing power and water-tightness of the rocks at each dam site, also to place rather broad limits on the type of dam for which the respective sites seem best suited. It was not considered necessary to study the corresponding reservoir sites in detail for excessive leakage appears to be unlikely. Except at three of the four site in the Santiam River basin, no test pits have been dug nor exploratory holes drilled, so that geologic features have been interpreted wholly from natural outcrops and from highway and railroad cuts. Because these outcrops and cuts are few, many problems related to the construction and maintenance of dams can not be answered at the this time and all critical features of the sites should be thoroughly explored by test pits and drilled holes before any dam is designed. This applied especially to sites in the Nehalem and Willamette River basins where commonly the cover of timber and brush is dense and the rocks are rather deeply weathered. On the Middle Santiam and South Santiam Rivers, the Cascadia, Greenpeter, and Sweet Home sits have been studies intensively by the United States Engineer Department, whose work included exploration by diamond-drill holes and test pits. Their conclusions as to geologic features are given in a report by McKitrick and have been reviewed by the writer. Data from this source have been used freely in the discussion of the respective sites in this report. The probability of destructive earthquakes in the region appears to be small but is not negligible. Prudence suggests that any high dam should embody features to assure stability against moderately strong earth motions.

Oregon↗

USGS1954

The investigation of chemical quality of water in tidal rivers

This report has been prepared for the guidance of personnel of the Water Resources Division who are engaged in water-quality investigations of tidal rivers. The study of tidal rivers is beset with many complexities not present in the investigation of non-tidal rivers. The periodic rise and fall of the tide may result in a corresponding periodic change in salinity at a sampling location on the tidal river. When the fresh water discharge is low, saline water may intrude up-river, and any factor changing the relative elevations of the ocean and the mean river level has an effect on the extent of salt-water intrusion. Variations in water composition between samples taken at several locations up or down river, at different depths, or at several locations across the stream are likely to be more pronounced than for similar sets of samples from a non-tidal stream. The nature of these variations and factors responsible for them are discussed, and the need for consideration of them in planning a sampling routine is stressed. The nature and mechanism of ocean-water intrusion in tidal rivers is discussed and sampling procedures for its detection are described. lllustrative examples - mostly from the work of the United States Geological Survey or State agencies - show various methods for correlating and presenting data from quality-of-water surveys of tidal rivers. Each tidal river presents an individual problem which can best be understood from a study of the factors involved. To that end the report is supplemented by an annotated bibliography of selected publications in the field.

Open-File Report↗

USGS1976

Hydrologic evaluation of the Upper Duchesne River Valley, Northern Uinta Basin area, Utah

The upper Duchesne River valley was studied during 1971-74 as part of an investigation of the northern Uinta Basin area, Utah and Colorado. The purpose of the study was to determine the relation of ground water to surface water, to estimate the quantity of ground water that moves to the Duchesne River, and to assess the probable effect of increased ground-water withdrawal on streamflow. The primary source of water for the study area is precipitation on the highlands adjacent to and north of the area and on the valley itself. Discharge from the area is mainly by flow in the Duchesne River. Adjacent to and within the valley, ground water and surface water are intimately related, and they can interchange in several ways due to both natural and manmade conditions. Aquifers in the upper Duchesne River valley range from Paleozoic to Quaternary in age. The consolidated aquifers receive recharge from highland precipitation and streamflow, and probably from interformational transfer of water. The consolidated rocks discharge water through springs and by interformational transfer of water to the valley fill of Quaternary age. The valley fill, which is composed mainly of outwash and related glacial debris, constitutes the main ground-water reservoir in the valley. The fill is, in general, highly permeable and transmits water rapidly. It is recharged by a small amount of underflow beneath the Duchesne River and its tributaries, by intermittent precipitation directly on the fill, by interformational movement of ground water from the adjacent consolidated rocks, and by seepage of surface water from streams, canals, and irrigated fields. The ground water in the fill is unconfined. The volume of ground water stored in the fill and theoretically available by gravity drainage is a minimum of 40,000 acre-feet (50 cubic hectometres); this volume fluctuates by a maximum of 10 percent annually. Ground water is discharged from the valley fill by wells and springs, by evapotranspiration, and by seepage into the Duchesne River. The discharge from wells and springs used for domestic, stock, public, and irrigation purposes in 1974 was about 2 cubic feet per second (0.06 cubic metres per second). The discharge by evapotranspiration was about 4 cubic feet per second (0.1 cubic metre per second). Discharge of ground water by seepage to the Duchesne River was about 39 cubic feet per second (1.1 cubic metres per second). Most ground water, except in parts of the Uinta Formation, and all the surface water sampled in the study area, was fresh. Because of the high permeability of the valley fill and because unconsumed ground water discharges to the Duchesne River, it can be concluded that lowering ground-water levels by large withdrawals of ground water in the upper Duchesne River valley ultimately would diminish the baseflow of the Duchesne River by about the amount of ground water with-drawn minus the amount salvaged from evapotranspiration.

Utah↗

USGS1977

Development of water facilities in the Santa Ana River Basin, California, 1810-1968: a compilation of historical notes derived from many sources describing ditch and canal companies, diversions, and water rights

This report traces by text, maps, and photographs, the development of the water supply in the Santa Ana River basin from its beginning in 1810 or 1811 to 1968. The value of the report lies in the fact that interpretation of the hydrologic systems in the basin requires knowledge of the concurrent state of development of the water supply, because that development has progressively altered the local regimen of both surface water and ground water. Most of the information for the earlier years was extracted and condensed from an investigation made by W. H. Hall, California State Engineer during the years 1878-87. Hall's study described irrigation development in southern California from its beginning through 1888. Information for the years following 1888 was obtained from the archives of the numerous water companies and water agencies in the Santa Ana River basin and from the various depositories of courthouse, county, and municipal records. The history of water-resources development in the Santa Ana River basin begins with the introduction of irrigation in the area by the Spanish, who settled in southern California in the latter part, of the 18th century. The first irrigation diversion from the Santa Ana River was made in 1810 or 1811 by Jose Antonio Yorba and Juan Pablo Peralta. Irrigation remained a localized practice during the Mexican-Californian, or rancho, period following the separation of Mexico from Spain in 1821. Rancho grantees principally raised cattle, horses, and sheep and irrigated only small· plots of feed grain for their livestock and fruit crops for household use. The breakup of the ranchos through sales to Americans, who were migrating to California in ever-increasing numbers following the acquisition of California by the United States in 1848, marked the beginning of a rapid increase in water use and the beginning of widespread irrigation. Many water companies and water agencies were organized to divert the surface flow of the Santa Ana River and its tributaries for irrigation. The Santa Ana River had been a perennial stream, except in years of extreme drought, from its source in the mountains nearly to the Pacific Ocean. With the great increase in population and the accompanying use of water for irrigation, the river was no longer a perennial stream, and it was necessary to supplement the surface-water supply with ground water. Many wells were dug or drilled in the artesian areas of the upper basin; of those wells many originally flowed, but as ground-water pressures and levels declined, an increasing amount of pumping was required. Conservation measures were taken to store some of the surplus winter runoff for use during low runoff years and during summer periods of heavy demand. Conservation facilities included surface-storage reservoirs and water-spreading grounds or percolation basins for utilization of underground storage. The competition for water in the Santa Ana River basin has been accompanied by frequent litigation over water tights, and over the years these water rights have generally been established by court decree. Although the demand for water still increases, the water demand for agricultural use has declined since the mid-1940's in response to the rapid urbanization of agricultural areas. Since that date the continued expansion of communities has encroached significantly into the agricultural areas causing a decrease in water use for agriculture, a more than compensating increase in water use for municipal purposes, and a rapid change in the ownership of water rights. The urbanization of flood plains made floods potentially more damaging than they previously had been when the flood plains were used for agriculture. In recognition of this increased hazard, flood-control facilities such as reservoirs, debris basins, flood-conveyance channels, and levees have been constructed to reduce potential damage. Most of the construction has occurred since the devastating flood of March 1938. By the mid-1940's it was apparent that the local water supply--both surface and ground water--would be insufficient to meet the increasing demand in the basin. To augment the local supply, Colorado River water was purchased from the Metropolitan Water District of Southern California and released to the Santa Ana River beginning in August 1949. Additional supplemental water became available in the early 1970's from northern California through the conveyance facilities of the California Water Project.

California↗

USGS1980

Chemical character of water in the Red River alluvial aquifer, Louisiana

The Red River alluvial aquifer of Louisiana underlies approximately 2,000 square miles in the Red River Valley of Louisiana. The aquifer is Pleistocene in age and consists of clay, silt, sand, and gravel deposited by the Red River. Sand and gravel constitute the lower two-thirds of the deposit, the most productive part of the aquifer. The aquifer ranges from 40 to 150 feet in thickness and reaches its maximum thickness in Avoyelles and Catahoula Parishes. Fine sand, silt, and clay of Holocene age overlie and generally confine the aquifer. These fine-grained deposits generally do not exceed 50 feet in thickness. The aquifer is recharged by downward seepage of rainfall in the valley, by lateral movement of water from adjacent Pleistocene and Tertiary formations, and by upward movement of water from underlying formations of Tertiary age. When large quantities of seepage occur locally within short periods of time, a temporary reduction in mineralization takes place in the upper part of the aquifer. Lateral recharge from Pleistocene and Tertiary formations generally upgrades water in the alluvial aquifer near the edge of the valley. Recharge from underlying aquifers may upgrade or downgrade the quality of water in the lower part of the alluvial aquifer. The Red River and its major tributaries recharge the Red River alluvial aquifer in local zones near the river during high stream stages, but noticeable water-quality changes occur only following periods of prolonged high stages. Ground water in the alluvium generally moves toward the streams and down the valley. Water levels fluctuate seasonally and are generally less than 30 feet below land surface. Annual water-level fluctuations have a maximum range of about 30 feet near the Red River, and a minimum range of only a few feet in some interstream areas. The Red River alluvial aquifer can yield 2,000 gallons per minute or more of water to individual wells where thick beds of coarse sand and gravel occur in the southern part of the study area. Aquifer tests indicate that the transmissivity ranges from 2,000 to 27,000 feet squared per day. The hydraulic conductivity ranges from 100 to 300 feet per day. Storage coefficients range from 6.0x10 -4 to 1.0x10 -3 . Water in the aquifer typically is of the calcium magnesium bicarbonate type. The water is hard to very hard, ranging in hardness from about 100 to 2,300 mg/L (milligrams per liter). However, hardness generally is in the 200- to 600-mg/L range. The ions that appear to be most variable in occurrence and sensitive to change with time are calcium, magnesium, iron, sulfate, and chloride. Iron concentrations range from less than 0.3 mg/L to as high as 49 mg/L but generally are 1 to 10 mg/L. In areas where rapid recharge occurs, shallow wells may have iron concentrations of less than 0.3 mg/L. Sulfate concentrations generally range from 0.5 to 50 mg/L but locally exceed 250 mg/L. The highest concentration detected was 1,900 mg/L. Chloride concentrations typically are less than 50 Mg/L. However, concentrations of chloride exceed 250 mg/L locally and are as high as 4,400 mg/L in a few areas. For this report, water with chloride concentrations greater than 250 mg/L is considered salty. The base of freshwater in the Red River Valley generally coincides with the base of the alluvium at depths of 80 to 150 feet. However, locally, the aquifer contains salty water, and the base of freshwater occurs within the aquifer; in parts of Rapides, Caddo, and Natchitoches Parishes, the base of freshwater extends below the alluvium. The largest occurrence of salty water is in Natchitoches Parish, with other smaller bodies occurring in Red River, Caddo, and Bossier Parishes. Water quality in the aquifer varies both areally and with depth; the quality also varies with time, depending on the quantity and chemical character of the recharge water.

Louisiana↗

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