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USGS2019

Refinement of eDNA as an early monitoring tool at the landscape-level: Study design considerations

Natural resource managers use data on the spatial range of species to guide management decisions. These data come from survey or monitoring efforts that use a wide variety of tools. Environmental DNA (eDNA) is a surveillance tool that uses genetic markers for detecting species and holds potential as a tool for large-scale monitoring programs. Two challenges of eDNA-based studies are uncertainties created by imperfect capture of eDNA in collection samples (e.g., water field samples) and imperfect detection of eDNA using molecular methods (e.g., quantitative PCR). Occurrence models can be used to address these challenges, thus we use an occurrence model to address two objectives: First, determine how many samples were required to detect species using eDNA; Second, examine when and where to take samples. We collected water samples from three different habitat types in the Upper Mississippi River when both Bighead Carp and Silver Carp were known to be present based on telemetry detections. Each habitat type (backwater, tributary, and impoundment) was sampled during April, May and November. Detections of eDNA for both species varied across sites and months, but were generally low, 0 - 19.3% of samples were positive for eDNA. Overall, we found that eDNA-based sampling holds promise to be a powerful monitoring tool for resource managers, however, limitations of eDNA-based sampling include different biological and ecological characteristics of target species such as seasonal habitat usage patterns as well as aspects of different physical environments that impact the implementation of these methods such as water temperature.

Ecological Applications↗
USGS2019

Estimating sand concentrations using ADCP‐based acoustic inversion in a large fluvial system characterized by bi‐modal suspended‐sediment distributions

Quantifying sediment flux within rivers is a challenge for many disciplines due, mainly, to difficulties inherent to traditional sediment sampling methods. These methods are operationally complex, high cost, and high risk. Additionally, the resulting data provide a low spatial and temporal resolution estimate of the total sediment flux, which has impeded advances in the understanding of the hydro‐geomorphic characteristics of rivers. Acoustic technologies have been recognized as a leading tool for increasing the resolution of sediment data by relating their echo intensity level measurements to suspended sediment. Further effort is required to robustly test and develop these techniques across a wide range of conditions found in natural river systems. This article aims to evaluate the application of acoustic inversion techniques using commercially available, down‐looking acoustic Doppler current profilers (ADCPs) in quantifying suspended sediment in a large sand bed river with varying bi‐modal particle size distributions, wash load and suspended‐sand ratios, and water stages. To achieve this objective, suspended sediment was physically sampled along the Paraná River, Argentina, under various hydro‐sedimentological regimes. Two ADCPs emitting different sound frequencies were used to simultaneously profile echo intensity level within the water column. Using the sonar equation, calibrations were determined between suspended‐sand concentrations and acoustic backscatter to solve the inverse problem. The study also analyzed the roles played by each term of the sonar equation, such as ADCP frequency, power supply, instrument constants, and particle size distributions typically found in sand bed rivers, on sediment attenuation and backscatter. Calibrations were successfully developed between corrected backscatter and suspended‐sand concentrations for all sites and ADCP frequencies, resulting in mean suspended‐sand concentration estimates within about 40% of the mean sampled concentrations. Noise values, calculated using the sonar equation and sediment sample characteristics, were fairly constant across evaluations, suggesting that they could be applied to other sand bed rivers.

Earth Surface Processes and Landforms↗
USGS2019

Semiautomated process for enumeration of fishes from recreational-grade side-scan sonar imagery

The use of hydroacoustic techniques is increasing as scientists search for less invasive ways to monitor fish populations, and using recreational side‐scan sonar (SSS) imagery for monitoring has become more common in aquatic resource management over the last 15 years due in part to its low cost and user‐friendly interface. The time‐consuming nature of manually counting fish targets has limited the use of the data that is collected by these systems in research or management contexts. To reduce the time and effort that is required to enumerate acoustic targets that are presumed to be fish, we developed a semiautomated process that rapidly quantifies targets from recreational SSS imagery by using an open‐source image processing software. Perceived fish targets were enumerated using a set of macroinstructions that performed similarly to manual enumeration by three experienced assessors. This method reduced variation that arises from individual assessors and eliminated the prohibitive time constraints that are associated with manual processing. Herein, we describe how our semiautomated process could be used in fisheries management contexts after further research and development of sampling methods. Future research will focus on field validation, quantifying relative abundance, testing across a broader range of environmental conditions, and exploring other applications for fisheries management.N

North American Journal of Fisheries Management↗
USGS2024

Improved computational methods for probabilistic liquefaction hazard analysis

Current procedures for analysis of and design against liquefaction hazards focus primarily on the use of probabilistic ground motions at a single ground-shaking hazard level, with the cyclic loading represented by a peak ground acceleration ( PGA ) corresponding to a target return period and a single representative moment magnitude M w . These parameters are typically used in conjunction with deterministic simplified procedures for estimating liquefaction triggering and consequences that largely neglect the considerable uncertainties inherent to liquefaction problems. Motivated by these limitations and the resulting inconsistencies in liquefaction design levels, early methods for probabilistic liquefaction hazard analysis (PLHA) were proposed that incorporate the full ground motion hazard space, integrated with probabilistic liquefaction triggering models. Such methods provide liquefaction factor of safety ( FS L ) hazard curves for standard penetration test (SPT) data. Recognizing the increased use of higher-resolution cone penetrometer test (CPT) data in engineering analysis and design and the potential computational challenges it presents, an expanded suite of probabilistic triggering models, and wider availability of more detailed seismic hazard data, an improved PLHA computational methodology is presented in this study. The methods described utilize the U.S. Geological Survey National Seismic Hazard Model directly through web services to obtain PGA hazard and disaggregation calculations for any site and average shear wave velocity in the upper 30 m of the site ( V s 30 ) in the conterminous United States, to reconstruct the PGA hazard space for use in PLHA calculations, and to employ array calculations for efficient liquefaction hazard curve estimates for the thousands of CPT measurements in a given profile. The framework presented here is modular in nature, and discussion on the use of alternative models and extension to probabilistic liquefaction consequence evaluation is presented. The importance of appropriate representation of probabilistic liquefaction model uncertainties is also highlighted, along with the impacts of different levels of uncertainty on the PLHA calculation. Finally, a potential roadmap for incorporation of the PLHA framework in seismic provisions is presented, with an illustration of how it can address current limitations and impacts in liquefaction hazard analysis and design.

Soil Dynamics and Earthquake Engineering↗
USGS2012

High paleointensities of the geomagnetic field from thermomagnetic studies on rift valley pillow basalts from the Mid- Atlantic Ridge

Nineteen pillow basalts dredged within the rift valley of the Mid-Atlantic Ridge at36.8°N were studied by the Thellier stepwise heating method in order to determine the paleointensity of the geomagnetic field when they erupted on to the sea floor. Previously reported fission track ages are 2,000 to 6,000 years for the youngest rocks (mainly olivine basalts) and 10,000 to 100,000 years for the others (mainly plagioclase basalts and pyroxene basalts). All but three pillow basalts meet the conditions commonly considered as indicative of quite reliable paleointensity estimates: stability of the direction of NRM during its thermal demagnetization, constant ratio of NRM/TRM (natural remanent magnetization to thermoremanent magnetization) over 50% or more of the original NRM intensity (80 to 94% for 11 specimens), and reproducibility of low-temperature partial TRM (PTRM). However, strong field thermomagnetic measurements indicate that 11 of these 16 samples display a significant increase in Curie temperature (15 to 80°C) during the paleointensity experiments below 250°C, notwithstanding the linearity of the NRM-TRM plot in this temperature interval. This alteration, probably due to low-temperature oxidation of the specimens, seems typical of young pillow basalts and may result in paleointensity estimates which are too high. This result shows that excellence of remanence tests (NRM-TRM linearity and PTRM stability) does not ensure the absence of chemical changes during the Thellier experiments and therefore the validity of the paleointensity obtained. The assumption that reliable paleointensities are obtained when the Curie point increase is 10°C or less led to the selection of five of our specimens, all from the youngest group. Their mean paleointensity is 64.2±20.5 μT (standard deviation) and the corresponding virtual axial dipole moment (VADM) is 11.5±3.7× 10 22 A m 2 . Given the variations of the VADM of the Earth's magnetic field over the last 6,000 years, as established from archeomagnetic studies, our paleointensity results suggest that the latest eruptions on the inner floor of the Rift Valley at 36.8°N occurred 1,500±1,000 years ago.

Journal of Geophysical Research Solid Earth↗
USGS2020

Human-associated species dominate passerine communities across the United States

Aim Human development and agriculture can have transformative and homogenizing effects on natural systems, shifting the composition of ecological communities towards non-native and native species that tolerate or thrive under human-dominated conditions. These impacts cannot be fully captured by summarizing species presence, as they include dramatic changes to patterns of species abundance. However, how human land use patterns and species invasions intersect to shape patterns of abundance and dominance within ecological communities is poorly understood even in well-known taxa. Location Conterminous United States. Time period 2010–2012. Major taxa studied Passeriformes. Methods We analyse continental-scale monitoring data to study the proportional abundance of non-native and native synanthropic species within passerine bird communities. Synanthropic species are those that benefit from an association with humans. We estimate how the amount and configuration of human development and agriculture relate to the degree to which human-associated species dominate passerine communities across the continent. Results Human-associated species comprised the majority of detected passerine individuals across two-thirds of bird surveys. Non-native and synanthropic species responded differently to land cover and reached highest relative abundance in different portions of the continent. The proportional abundance of synanthropic birds increased rapidly with development, but was not related to the configuration of land cover. The proportion of non-native individuals was higher when intensively-used land cover was more aggregated. Main conclusions Even low amounts of intensively-used lands were associated with a dramatic reshaping of passerine communities, with consequences for patterns of relative abundance across the continent.

Global Ecology and Biogeography↗
USGS2003

Temperature, pressure, and compositional effects on anomalous or "self" preservation of gas hydrates

We previously reported on a thermal regime where pure, polycrystalline methane hydrate is preserved metastably in bulk at up to 75 K above its nominal temperature stability limit of 193 K at 0.1 MPa, following rapid release of the sample pore pressure. Large fractions (>50 vol.%) of methane hydrate can be preserved for 2-3 weeks by this method, reflecting the greatly suppressed rates of dissociation that characterize this "anomalous preservation" regime. This behavior contrasts that exhibited by methane hydrate at both colder (193-240 K) and warmer (272-290 K) isothermal test conditions, where dissociation rates increase monotonically with increasing temperature. Here, we report on recent experiments that further investigate the effects of temperature, pressure, and composition on anomalous preservation behavior. All tests conducted on sI methane hydrate yielded self-consistent results that confirm the highly temperature-sensitive but reproducible nature of anomalous preservation behavior. Temperature-stepping experiments conducted between 250 and 268 K corroborate the relative rates measured previously in isothermal preservation tests, and elevated pore-pressure tests showed that, as expected, dissociation rates are further reduced with increasing pressure. Surprisingly, sII methane-ethane hydrate was found to exhibit no comparable preservation effect when rapidly depressurized at 268 K, even though it is thermodynamically stable at higher temperatures and lower pressures than sI methane hydrate. These results, coupled with SEM imaging of quenched sample material from a variety of dissociation tests, strongly support our earlier arguments that ice-"shielding" effects provided by partial dissociation along hydrate grain surfaces do not serve as the primary mechanism for anomalous preservation. The underlying physical-chemistry mechanism(s) of anomalous preservation remains elusive, but appears to be based more on textural or morphological changes within the hydrate material itself, rather than on compositional zoning or ice-rind development.

Canadian Journal of Physics↗
USGS1994

Surface-water-quality assessment of the Yakima River basin in Washington: major-and minor-element data for sediment, water, and aquatic biota, 1987-91

Major- and minor-element concentrations are presented for streambed and suspended sediment, filtered- and unfiltered-water, and aquatic-biota samples collected during 1987-91 from the Yakima River Basin in south-central Washington. The samples were collected as part of the U.S. Geological Survey's National Water-quality Assessment (NAWQA) program which is designed to provide results that are useful in understanding and managing the Nation's water resources. This report includes the sampling approach, field collection and processing techniques, and methods of chemical analysis, as well as a compilation of chemical data, statistical summaries, and quality- control data. These data may be used by scientists and resource managers to describe (1) spatial distribution of selected major and minor elements in sediment, water, and aquatic biota of the Yakima River Basin; (2) temporal variation for element concentrations in filtered water and in suspended sediment at selected sites; (3) suita- bility of surface water for preservation of aquatic life and protection of human health; and (4) major natural and anthropogenic sources of major and minor elements in the Yakima River Basin that affect observed water-quality conditions. Streambed-sediment samples were collected once from 27 sites in the basin during 1987-91. Suspended-sediment and filtered-water samples were collected monthly and during hydrologic events (including snowmelt and winter rainstorms) at seven sites, and filtered-water samples were collected at least once at an additional 37 sites during synoptic samplings. Unfiltered-water samples were collected at seven sites on a quarterly basis during 1987 only. Samples of aquatic plants were collected once in 1989, and aquatic insects, fish, and clams were collected from 34 sites three times during 1989-90.

Washington↗
USGS1964

Surface water records of Arizona, 1964

The surface-water records for t he 1964 water year for gaging st at i ons and miscellaneous si tes within the State of Arizona are given in this report. For convenience there are also included records for a few pertinent gaging stations in bordering States. The records were collected and computed by the Water Resources Division of the U.S. Geological Survey, under the direction of R. M. Babcock, district chief. This report continues a new method, begun with the 1961 water year, of presenting, annually, basic data on surface-water records by States. Through September 30, 1960, the records of discharge and stage of str eams and contents and stage of lakes or reservoirs were published in an annual series of U.S. Geological Survey water-supply papers entitled "Surface Water Supply of the United States." Since 1951 there have been 20 volumes in the series; each volume covered an area whose boundaries coincided wi th those of certain natural drainage areas. The records in Arizona were contained in Part 9 of that series. Beginning with the 1961 water year, streamflow records and related data are being released by the Geological Survey in annual reports on a State-boundary basis. Distribution of these basic-data reports will be limited and primarily for local needs.

Arizona↗
USGS1965

Water resources data for Arizona, 1965: Part 1. Surface water records

The surface-water records for the 1965 water year for gaging stations and miscellaneous sites are included in this r e port. Records for a few pertinent gaging stations in bordering States also are included for convenience. The records were collected and computed by the Water Resources Division of the U.S. Geological Survey under the direction of H. M. Babcock, district chief. This report is the continuation of a new method, which was started with the 1961 water year, of presenting, annually, basic data on surface-water records by States. Through September 30, 1960, the records of discharge and stage of streams and contents and stage of lakes or reservoirs were published in the annual series of U.S. Geological Survey water-supply papers entitled "Surface Water Supply of the United States." Since 1951 there have been 20 volumes in the series; each volume covers an area whose boundaries coincide with those of certain natural drainage areas. The records for Arizona are contained in Part 9 of that series. Since 1961, streamflow records and r elated data have been released by the Geological Survey in annual reports on a State-boundary basis. Distribution of these basic-data reports is limited, and they are primarily for local needs.

Arizona↗
USGS1984

Isolation of organic acids from large volumes of water by adsorption chromatography

The concentrations of dissolved organic carbon from most natural waters ranges from 1 to 20 milligrams carbon per liter, of which approximately 75 percent are organic acids. These acids can be chromatographically fractionated into hydrophobic organic acids, such as humic substances, and hydrophilic organic acids. To effectively study any of these organic acids, they must be isolated from other organic and inorganic species, and concentrated. Usually, large volumes of water must be processed to obtain sufficient quantities of material, and adsorption chromatography on synthetic, macroporous resins has proven to be a particularly effective method for this purpose. The use of the nonionic Amberlite XAD-8 and Amberlite XAD-4 resins and the anion exchange resin Duolite A-7 for isolating and concentrating organic acids from water is presented.

Book↗
USGS2000

Identification of a small, naked virus in tumor-like aggregates in cell lines derived from a green turtle, Chelonia mydas, with fibropapillomas

Serial cultivation of cell lines derived from lung, testis, periorbital and tumor tissues of a green turtle (Chelonia mydas) with fibropapillomas resulted in the in vitro formation of tumor-like cell aggregates, ranging in size from 0.5 to 2.0 mm in diameter. Successful induction of tumor-like aggregates was achieved in a cell line derived from lung tissue of healthy green turtles, following inoculation with cell-free media from these tumor-bearing cell lines, suggesting the presence of a transmissible agent. Thin-section electron microscopy of the cell aggregates revealed massive collagen deposits and intranuclear naked viral particles, measuring 5095 nm in diameter. These findings, together with the morphological similarity between these tumor-like cell aggregates and the naturally occurring tumor, suggest a possible association between this novel virus and the disease. Further characterization of this small naked virus will clarify its role in etiology of green turtle fibropapilloma, a life-threatening disease of this endangered marine species.

Journal of Virological Methods↗
USGS2011

North American Jurassic APW: The current dilemma

Geologists are in a quandary over the correct interpretation of paleomagnetic data for Jurassic rocks of the North American plate. Conflicting reference paleopoles and alternate methods of constructing apparent polar wander (APW) paths have led to a controversy regarding the configuration of Jurassic APW for cratonic North America. These differences have been recently disputed at meetings (see Eos , Spring Meeting Supplement, April 7, 1992, p. 94) and in an exchange of letters in the Journal of Geophysical Research-Solid Earth [ Butler et al ., 1992; Van Fossen and Kent , 1992a]. At stake is important information concerning the Jurassic paleogeography of North America and the whole of Pangea, as well as the nature and driving mechanism of plate movements. In addition, cratonic paleopoles provide a reference frame for measuring relative displacements of tectonostratigraphic terranes.

Eos Science News↗
USGS2008

Ground-water quality data in the San Fernando-San Gabriel study unit, 2005— Results from the California GAMA program

Ground-water quality in the approximately 460 square mile San Fernando-San Gabriel study unit (SFSG) was investigated between May and July 2005 as part of the Priority Basin Assessment Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The GAMA Priority Basin Assessment Project was developed in response to the Groundwater Quality Monitoring Act of 2001 and is being conducted by the U.S. Geological Survey (USGS) in cooperation with the California State Water Resources Control Board (SWRCB). The San Fernando-San Gabriel study was designed to provide a spatially unbiased assessment of raw ground-water quality within SFSG, as well as a statistically consistent basis for comparing water quality throughout California. Samples were collected from 52 wells in Los Angeles County. Thirty-five of the wells were selected using a spatially distributed, randomized grid-based method to provide statistical representation of the study area (grid wells), and seventeen wells were selected to aid in the evaluation of specific water-quality issues or changes in water chemistry along a historic ground-water flow path (understanding wells). The ground-water samples were analyzed for a large number of synthetic organic constituents [volatile organic compounds (VOCs), pesticides and pesticide degradates], constituents of special interest [perchlorate, N-nitrosodimethylamine (NDMA), 1,2,3-trichloropropane (1,2,3-TCP), and 1,4-dioxane], naturally occurring inorganic constituents (nutrients, major and minor ions, and trace elements), radioactive constituents, and microbial indicators. Naturally occurring isotopes (tritium, and carbon-14, and stable isotopes of hydrogen, oxygen, and carbon), and dissolved noble gases also were measured to help identify the source and age of the sampled ground water. Quality-control samples (blanks, replicates, samples for matrix spikes) were collected at approximately one-fifth (11 of 52) of the wells, and the results for these samples were used to evaluate the quality of the data for the ground-water samples. Assessment of the quality-control results showed that the data had very little bias or variability and resulted in censoring of less than 0.7 percent (32 of 4,484 measurements) of the data collected for ground-water samples. This study did not attempt to evaluate the quality of water delivered to consumers; after withdrawal from the ground, water typically is treated, disinfected, or blended with other waters to maintain acceptable water quality. Regulatory thresholds apply to treated water that is served to the consumer, not to raw ground water. However, to provide some context for the results, concentrations of constituents measured in the raw ground water were compared with health-based thresholds established by the U.S. Environmental Protection Agency (USEPA) and California Department of Public Health (CDPH) and thresholds established for aesthetic concerns (secondary maximum contaminant levels, SMCL-CA) by CDPH. VOCs were detected in more than 90 percent (33 of 35) of grid wells. For all wells sampled for SFSG, nearly all VOC detections were below health-based thresholds, and most were less than one-tenth of the threshold values. Samples from seven wells had at least one detection of PCE, TCE, tetrachloromethane, NDMA, or 1,2,3-TCP at or above a health-based threshold. Pesticides were detected in about 90 percent (31 of 35) grid wells and all detections in samples from SFSG wells were below health-based thresholds. Major ions, trace elements, and nutrients in samples from 17 SFSG wells were all below health-based thresholds, with the exception of one detection of nitrate that was above the USEPA maximum contaminant level (MCL-US). With the exception of 14 samples having radon-222 above the proposed MCL-US, radioactive constituents were below health-based thresholds for 16 of the SFSG wells sampled. Total dissolved solids in 6 of the 24 SFSG wells that were sampled ha

California↗
USGS1994

National Water-Quality Assessment (NAWQA) Program, Long Island-New Jersey (LINJ) Coastal Drainages Study Unit : Scope of the Long Island-New Jersey Coastal Drainages Study-Unit investigation

Scope of the Long Island-New Jersey Coastal Drainages Study-Unit Investigation In 1991, the U.S. Geological Survey (USGS) began a National Water-Quality Assessment (NAWQA) Program to document the status of and trends in quality of a large representative part of the Nation's water resources and to provide a sound scientific understanding of the primary natural and human factors that affect the quality of these resources. The program is designed to produce long-term, consistent water-quality information that will be useful to policymakers and managers at national, State, and local levels. Investigations of 60 hydrologic systems (study units), which include parts of most major river basins and aquifer systems in the United States, are the building blocks of NAWQA. A framework has been established to ensure nationwide consistency in the approach to each study--in field and laboratory methods, in water-quality measurements, and in the supporting data requirements. Twenty studies were started in 1991, 20 more have begun in 1994, and 20 are scheduled to begin in 1997. A major design feature of the program that will facilitate integration of water-quality information at national, regional, and local scales is coordination between the individual study-unit teams and the national synthesis effort at all stages of the investigations. Thus, results that relate to various topics addressed in the study-unit investigations will be integrated smoothly into NAWQA's national synthesis component. Teams have been developed to address the following topics of national importance: pesticides, nutrients, and volatile organic compounds. These teams are investigating the specific issues by means of comparative studies of a large set of hydrologic systems distributed over a wide range of environmental settings found in the 60 study-units. The information below summarizes the goals and scope of the NAWQA Program and the Long Island-New Jersey Coastal Drainages study, which began in 1994.

New Jersey↗
USGS2003

Processes affecting the trihalomethane concentrations associated with the third injection, storage, and recovery rest at Lancaster, Antelope Valley, California, March 1998 through April 1999

The formation and fate of trihalomethanes (THM) during the third injection, storage, and recovery test at Lancaster, Antelope Valley, California, were investigated as part of a program to assess the long-term feasibility of using injection, storage, and recovery as a water-supply method and as a way to reduce water-level declines and land-subsidence in the Antelope Valley. The program was conducted by the U.S. Geological Survey in cooperation with the Los Angeles County Department of Public Works and the Antelope Valley-East Kern Water Agency. The water used for injection, storage, and recovery must be disinfected before injection and thus contains THMs and other disinfection by-products. THMs (chloroform, CHCl3, bromodichloromethane, CHCl2Br, dibromochloromethane, CHClBr2, and bromoform, CHBr3) are formed by reaction between natural dissolved organic carbon that is present in water and chlorine that is added during the disinfection step of the drinking water treatment process. THMs are carcinogenic compounds, and their concentrations in drinking water are regulated by the U.S. Environmental Protection Agency. During previous cycles of the Lancaster program, extracted water still contained measurable concentrations of THMs long after continuous pumping had extracted a greater volume of water than had been injected. This raised concerns about the potential long-term effect of injection, storage, and recovery cycles on ground-water quality in Antelope Valley aquifers. The primary objectives of this investigation were to determine (1) what controlled continued THM formation in the aquifer after injection, (2) what caused of the persistence of THMs in the extracted water, even after long periods of pumping, (3) what controlled the decrease of THM concentrations during the extraction period, and (4) the potential for natural attenuation of THMs in the aquifer. Laboratory experiments on biodegradation of THMs in microcosms of aquifer materials indicate that aquifer bacteria did not degrade CHCl3 or CHBr3 under aerobic conditions, but did degrade CHBr3 under anaerobic conditions. However, the aquifer is naturally aerobic and CHCl3 is the dominant THM species; therefore, biodegradation is not considered an important attenuation mechanism for THMs in this aquifer. The alluvial-fan sediments comprising the aquifer have very low contents of organic matter; therefore, sorption is not considered to be an important attenuation mechanism for THMs in this aquifer. Laboratory experiments on formation of THMs in the injection water indicate that continued THM formation in the injection water after injection into the aquifer was limited by the amount of residual chlorine in the injection water at the time of injection. After accounting for THMs formed by reaction of this residual chlorine, THMs behaved as conservative constituents in the aquifer, and the only process affecting the concentration of THMs was mixing of the injection water and the ground water. The mixing process was quantified using mass balances of injected constituents, the sulfur hexafluoride (SF6) tracer that was added to the injected water, and a simple descriptive mathematical mixing model. Mass balance calculations show that only 67 percent of the injected THMs and chloride were recovered by the time that a volume of water equivalent to 132 percent of the injection water volume was extracted. Pumping 250 percent of the injection water volume only increased recovery of injected THMs to 80 percent. THM and SF6 concentrations in the extracted water decreased concomitantly during the extraction period, and THM concentrations predicted from SF6 concentrations closely matched the measured THM concentrations. Because SF6 is a conservative tracer that was initially only present in the injection water, parallel decreases in SF6 and THM concentrations in the extracted water must be due to dilution of injection water with ground water. The simple descriptive mixing mode

Water-Resources Investigations Report↗
USGS1964

Geology and ground-water resources of Rock County, Wisconsin

Rock County is in south-central Wisconsin adjacent to the Illinois State line. The county has an area of about 723 square miles and had a population of about 113,000 in 1957 ; it is one of the leading agricultural and industrial counties in the State. The total annual precipitation averages about 32 inches, and the mean annual temperature is about 48 ? F. Land-surface altitudes are generally between 800 and 00 feet, but range from 731 feet, where the Rock River flows into Illinois, to above 1,080 feet, at several places in the northwestern part of the county. The northern part of Rock County consists of the hills and kettles of a terminal moraine which slopes southward to a flat, undissected outwash plain. The southeastern part of the county is an area of gentle slopes, whereas the southwestern part consists of steep-sided valleys and ridges. Rock County is within the drainage basin of the Rock River, which flows southward through the center of the county. The western and southwestern parts of ,the county are drained by the Sugar River und Coon Creek, both of which flow into the Pecatonica River in Illinois and thence into the Rock River. The southeastern part of the county is drained by Turtle Creek, which also flows into Illinois before joining the Rock River. Nearly all the lakes and ponds are in the northern one-third of the county, the area of most recent glaciation. The aquifers in Rock County are of sedimentary origin and include deeply buried sandstones, shales, and dolomites of the Upper Cambrian series. This series overlies crystalline rocks of Precambrian age and supplies water to all the cities and villages in the county. The St. Peter sandstone of Ordovician age underlies all Rock County except where the formation has been removed by erosion in the Rock and Sugar River valleys, and perhaps in Coon Creek valley. The St. Peter sandstone is the principal source of water for domestic, stock, and small industrial wells in the western half of the county. This sandstone also yields some water to uncased wells that tap the deeper rocks of the Upper Cambrian series. East of the Rock River the Platteville, Decorah, and Galena formations undifferentiated, or Platteville-Galena unit, is the principal source of water for domestic and stock wells. Unconsolidated deposits of glacial origin cover most of Rock County and supply water to many small wells. In the outwash deposits along the Rock River, wells of extremely high capacity have been developed for industrial and municipal use. The most significant feature of the bedrock surface in Rock County is the ancestral Rock River valley, which has been filled with glacial outwash to a depth of at least 396 feet below the present land surface. East of the buried valley the bedrock has a fiat, relatively undissected surface. West of the valley the bedrock surface is rugged and greatly dissected. Ground water in Rock County occurs under both water-table and artesian conditions; however, because of the interconnection and close relation of all ground water in the county, the entire system is considered to be a single groundwater body whose surface may be represented by one piezometric map. Recharge occurs locally, throughout the county. Nearly all recharge is derived directly from precipitation that percolates downward to become a part of the groundwater body. Natural movement of water in the consolidated water-bearing units is generally toward the buried Rock and Sugar River valleys. Movement of water in the sandstones of Cambrian age was calculated to be about 44 million gallons a day toward the Rock River. Discharge from wells in Rock County in 1957 was about 23 million gallons a day. Nearly 90 percent of this water was drawn from the area along the Rock River. Drilled wells, most of which were drilled by the cable-tool method, range in diameter from 3 to 26 inches, and in depth from 46 to 1,225 feet. Driven wells in alluvium and glacial drift are usually 1? to 2? in

Wisconsin↗
USGS2018

Estimating freshwater productivity, overwinter survival, and migration patterns of Klamath River Coho Salmon

An area of great importance to resource management and conservation biology in the Klamath Basin is balancing water usage against the life history requirements of threatened Coho Salmon. One tool for addressing this topic is a freshwater dynamics model to forecast Coho Salmon productivity based on environmental inputs. Constructing such a forecasting tool requires local data to quantify the unique life history processes of Coho Salmon inhabiting this region. Here, we describe analytical methods for estimating a series of sub-models, each capturing a different life history process, which will eventually be synchronized as part of a freshwater dynamics model for Klamath River Coho Salmon. Specifically, we draw upon extensive population monitoring data collected in the basin to estimate models of freshwater productivity, overwinter survival, and migration patterns. Our models of freshwater productivity indicated that high summer temperatures and high winter flows can both adversely affect smolt production and that such relationships are more likely in tributaries with naturally regulated flows due to substantial intraannual environmental variation. Our models of overwinter survival demonstrated extensive variability in survival among years, but not among rearing locations, and demonstrated that a substantial proportion (~ 20%) of age-0+ fish emigrate from some rearing sites in the winter. Our models of migration patterns indicated that many age-0+ fish redistribute in the basin during the summer and winter. Further, we observed that these redistributions can entail long migrations in the mainstem where environmental stressors likely play a role in cueing refuge entry. Finally, our models of migration patterns indicated that changes in discharge are important in cueing the seaward migration of smolts, but that the nature of this behavioral response can differ dramatically between tributaries with naturally and artificially regulated flows. Collectively, these analyses demonstrate that environmental variation interacts with most phases of the freshwater life history of Klamath River Coho Salmon and that anthropogenic environmental variation can have a particularly large bearing on productivity.

Arcata Fisheries Technical Report↗

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