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At least 181 records · Page 10Linked to original sources
USGS1997

Life history, latitudinal patterns, and status of the shortnose sturgeon, Acipenser brevirostrum

Historically, shortnose sturgeon inhabited most major rivers on the Atlantic coast of North America south of the Saint John River, Canada. Today, only 16 populations may remain. Major anthropogenic impacts on shortnose sturgeon are blockage of spawning runs by dams, harvest of adults (bycatch and poaching), dredging of fresh/saltwater riverine reaches, regulation of river flows, and pollution. The pattern of anadromy (adult use of salt water) varies with latitude. The pattern may reflect bioenergetic adaptations to latitudinal differences between fresh and salt water habitats for thermal and foraging suitability. The greater adult abundance in northern and north-central populations likely reflects a historical difference with southern populations that is currently accentuated by increased anthropogenic impacts on southern populations. Adult abundance is less than the minimum estimated viable population abundance of 1000 adults for 5 of 11 surveyed populations, and all natural southern populations. Across the latitudinal range, spawning adults typically travel to about river km 200 or farther upstream. Dams built downstream of spawning reaches block spawning runs, and can divide amphidromous populations into up- and downstream segments. Conservation efforts should correct environmental and harvest impacts, not stock cultured fish into wild populations.

Environmental Biology of Fishes↗
USGS2012

Organic geochemistry and petrology of subsurface Paleocene-Eocene Wilcox and Claiborne Group coal beds, Zavala County, Maverick Basin, Texas, USA

Coal samples from a coalbed methane exploration well in northern Zavala County, Maverick Basin, Texas, were characterized through an integrated analytical program. The well was drilled in February, 2006 and shut in after coal core desorption indicated negligible gas content. Cuttings samples from two levels in the Eocene Claiborne Group were evaluated by way of petrographic techniques and Rock–Eval pyrolysis. Core samples from the Paleocene–Eocene Indio Formation (Wilcox Group) were characterized via proximate–ultimate analysis in addition to petrography and pyrolysis. Two Indio Formation coal samples were selected for detailed evaluation via gas chromatography, and Fourier transform infrared (FTIR) and 13 C CPMAS NMR spectroscopy. Samples are subbituminous rank as determined from multiple thermal maturity parameters. Elevated rank (relative to similar age coal beds elsewhere in the Gulf Coast Basin) in the study area is interpreted to be a result of stratigraphic and/or structural thickening related to Laramide compression and construction of the Sierra Madre Oriental to the southwest. Vitrinite reflectance data, along with extant data, suggest the presence of an erosional unconformity or change in regional heat flow between the Cretaceous and Tertiary sections and erosion of up to >5 km over the Cretaceous. The presence of liptinite-rich coals in the Claiborne at the well site may indicate moderately persistent or recurring coal-forming paleoenvironments, interpreted as perennially submerged peat in shallow ephemeral lakes with herbaceous and/or flotant vegetation. However, significant continuity of individual Eocene coal beds in the subsurface is not suggested. Indio Formation coal samples contain abundant telovitrinite interpreted to be preserved from arborescent, above-ground woody vegetation that developed during the middle portion of mire development in forested swamps. Other petrographic criteria suggest enhanced biological, chemical and physical degradation at the beginning and end of Indio mire development. Fluorescence spectra of sporinite and resinite are consistent and distinctly different from each other, attributed to the presence of a greater proportion of complex asphaltene and polar molecules in resinite. Gas chromatography of resinite-rich coal shows sesquiterpenoid and diterpenoid peaks in the C 14–17 range, which are not present in resinite-poor coal. Quantities of extracts suggest bitumen concentration below the threshold for effective source rocks [30–50 mg hydrocarbon/g total organic carbon (HC/g TOC)]. Saturate/aromatic and pristane/phytane (Pr/Ph) ratios are different from values for nearby Tertiary-reservoired crude oil, suggesting that the Indio coals are too immature to source liquid hydrocarbons in the area. However, moderately high HI values (200–400 mg HC/g rock) may suggest some potential for naphthenic–paraffinic oil generation where buried more deeply down stratigraphic/structural dip. Extractable phenols and C 20+ alkanes are suggested as possible intermediates for acetate fermentation in microbial methanogenesis which may, however, be limited by poor nutrient supply related to low rainfall and meteoric recharge rate or high local sulfate concentration.

Texas↗
USGS2017

Do you hear what I see? Vocalization relative to visual detection rates of Hawaiian hoary bats (Lasiurus cinereus semotus)

B ats vocalize during flight as part of the sensory modality called echolocation, but very little is known about whether flying bats consistently call. Occasional vocal silence during flight when bats approach prey or conspecifics has been documented for relatively few species and situations. Bats flying alone in clutter-free airspace are not known to forgo vocalization, yet prior observations suggested possible silent behavior in certain, unexpected situations. Determining when, why, and where silent behavior occurs in bats will help evaluate major assumptions of a primary monitoring method for bats used in ecological research, management, and conservation. In this study, we recorded flight activity of Hawaiian hoary bats ( Lasiurus cinereus semotus ) under seminatural conditions using both thermal video cameras and acoustic detectors. Simultaneous video and audio recordings from 20 nights of observation at 10 sites were analyzed for correspondence between detection methods, with a focus on video observations in three distance categories for which accompanying vocalizations were detected. Comparison of video and audio detections revealed that a high proportion of Hawaiian hoary bats “seen” on video were not simultaneously “heard.” On average, only about one in three visual detections within a night had an accompanying call detection, but this varied greatly among nights. Bats flying on curved flight paths and individuals nearer the cameras were more likely to be detected by both methods. Feeding and social calls were detected, but no clear pattern emerged from the small number of observations involving closely interacting bats. These results may indicate that flying Hawaiian hoary bats often forgo echolocation, or do not always vocalize in a way that is detectable with common sampling and monitoring methods. Possible reasons for the low correspondence between visual and acoustic detections range from methodological to biological and include a number of biases associated with the propagation and detection of sound, cryptic foraging strategies, or conspecific presence. Silent flight behavior may be more prevalent in echolocating bats than previously appreciated, has profound implications for ecological research, and deserves further characterization and study.

Hawai'i↗
USGS2022

Movement and habitat use by smallmouth bass Micropterus dolomieu velox in a dynamic Ozark Highlands riverscape

Stream fish movement in response to changing resource availability and habitat needs is important for fish growth, survival and reproduction. The authors used radio telemetry to evaluate individual movements, daily movement rates, home ranges and habitat-use characteristics of adult (278–464 mm L T ) Neosho smallmouth bass Micropterus dolomieu velox in three Ozark Highlands streams from June 2016 to February 2018. The authors quantified variation in movement and habitat use among seasons and streams and examined relations with select environmental cues ( i.e. , temperature and discharge), fish size and sex. Maximum movement distances were an order of magnitude greater in the larger Elk River (17.0 km) and Buffalo Creek (12.9 km) than in the smaller Sycamore Creek (1.71 km), were similar in both upstream and downstream directions and typically occurred during the spring. Most movement rates were ≤10 m day −1 in all streams and seasons, except for Elk River during spring. Ranking of linear mixed-effects models using AIC c supported that movement rates were much greater in spring and increased with stream size. Spring movement rate increased with discharge and water temperature; only weak relationships were apparent during other seasons. Increased variation in water temperature had a small negative effect on movement rate. Home range size was highly variable among individuals, ranging 45–15,061 m (median: 773 m), and was not related to fish size, sex, season or stream. Although some fish moved between rivers, this study's tagged fish did not use reservoir or associated interface habitat. Water temperatures used by this study's tagged fish followed seasonal patterns but indicated the use of thermal refugia during summer and winter. Deeper-water habitats were used in Buffalo Creek and in winter across all study streams, whereas greater velocities used in the Elk River likely reflect the increased use of run habitats. Use of pool habitats predominated among tagged fish, particularly in smaller streams. The results of this study indicate considerable heterogeneity in movement and habitat use within and among lotic populations of Neosho smallmouth bass. These findings suggest that population-specific management may be appropriate and highlight the importance of natural flow conditions ( i.e. , spring high flows) and connected habitats for this endemic sport fish, particularly in smaller streams.

Missouri, Oklahoma↗
USGS2016

Report of the River Master of the Delaware River for the period December 1, 2008–November 30, 2009

A Decree of the Supreme Court of the United States, entered June 7, 1954, established the position of Delaware River Master within the U.S. Geological Survey (USGS). In addition, the Decree authorizes diversions of water from the Delaware River Basin and requires compensating releases from certain reservoirs, owned by New York City, to be made under the supervision and direction of the River Master. The Decree stipulates that the River Master will furnish reports to the Court, not less frequently than annually. This report is the 56th Annual Report of the River Master of the Delaware River. It covers the 2009 River Master report year, the period from December 1, 2008, to November 30, 2009. During the report year, precipitation in the upper Delaware River Basin was 50.89 inches (in.) or 116 percent of the long-term average. Combined storage in Pepacton, Cannonsville, and Neversink Reservoirs remained high throughout the year and did not decline below 80 percent of combined capacity at any time. Delaware River operations during the year were conducted as stipulated by the Decree and the Flexible Flow Management Program (FFMP). Diversions from the Delaware River Basin by New York City and New Jersey were in full compliance with the Decree. Reservoir releases were made as directed by the River Master at rates designed to meet the flow objective for the Delaware River at Montague, New Jersey, on 25 days during the report year. Releases were made at conservation rates—rates designed to relieve thermal stress and protect the fishery and aquatic habitat in the tailwaters of the reservoirs—on all other days. During the report year, New York City and New Jersey complied fully with the terms of the Decree, and directives and requests of the River Master. As part of a long-term program, the quality of water in the Delaware Estuary between Trenton, New Jersey, and Reedy Island Jetty, Delaware, was monitored at various locations. Data on water temperature, specific conductance, dissolved oxygen, and pH were collected continuously by electronic instruments at four sites. In addition, selected water-quality data were collected at 22 sites on a monthly basis. The Delaware River Basin Commission (DRBC) collects monthly samples from March through October at 22 sites between Biles Channel and South Brown Shoal. Samples were collected and analyzed by the State of Delaware for the DRBC. At each site, water samples were collected at a single point near the center of the channel near the surface and analyzed for selected physical properties, and chemical and biological constituents including routine chemical substances, nutrients and bacteria. These consist of analyses of field measurements and laboratory determinations.

Delaware River↗
USGS2025

Systematic shifts in the variation among host individuals must be considered in climate-disease theory

To make more informed predictions of host–pathogen interactions under climate change, studies have incorporated the thermal performance of host, vector and pathogen traits into disease models to quantify effects on average transmission rates. However, this body of work has omitted the fact that variation in susceptibility among individual hosts affects disease spread and long-term patterns of host population dynamics. Furthermore, and especially for ectothermic host species, variation in susceptibility is likely to be plastic, influenced by variables such as environmental temperature. For example, as host individuals respond idiosyncratically to temperature, this could affect the population-level variation in susceptibility, such that there may be predictable functional relationships between variation in susceptibility and temperature. Quantifying the relationship between temperature and among-host trait variation will therefore be critical for predicting how climate change and disease will interact to influence host–pathogen population dynamics. Here, we use a model to demonstrate how short-term effects of temperature on the distribution of host susceptibility can drive epidemic characteristics, fluctuations in host population sizes and probabilities of host extinction. Our results emphasize that more research is needed in disease ecology and climate biology to understand the mechanisms that shape individual trait variation, not just trait averages.

Proceedings of the Royal Society B: Biological Sci↗
USGS1974

Chemical and biological quality of Lake Dicie at Eustis, Florida, with emphasis on the effects of storm runoff

After the construction of a storm drain designed to carry runoff from the southeastern part of the city of Eustis into Lake Dicie, algal blooms occurred in the lake. In order to determine the nature and extent of these blooms, the quality of both the lake and storm runoff into the lake was monitored from March 1971 through June 1973. Surface runoff makes up about 65 percent of the total input to the lake and the storm drain probably contributes about half of the total input. Average concentrations of the major ions in samples of storm runoff collected from the storm drain were not appreciably different from concentrations found in Lake Dicie. However, the storm runoff contained high concentrations of suspended sediment, nitrogen, phosphorus, lead and other trace elements. Most of the sediment and trace elements and much of the phosphorus carried into the lake by storm runoff were trapped in the bottom sediments. The only appreciable change in the quality of the lake since it was first sampled in 1969 is a reduction in the concentration of phosphorus. The amount of inorganic nitrogen and soluble orthophosphate carried into the lake during this investigation was equivalent to about 3,500 pounds (1,600 kilograms) of 6-6-6 commercial fertilizer. Most of these nutrients were taken up by the large phytoplankton population and eventually incorporated into the bottom sediments in Lake Dicie. During much of the year Lake Dicie is thermally stratified and the water near the bottom becomes enriched with nutrients, particularly nitrogen, from the decomposition of algal cells and other organic matter. In the winter months, the water cools and the lake slowly "turns over." The mixing of the nitrogen-rich bottom water with the water in the upper part of the lake where the dissolved oxygen and light penetration are sufficient to support algae often results in explosive algal growth, commonly called a bloom. The two highest concentrations of phytoplankton observed in Lake Dicie during the investigation occurred in December when the lake was not stratified. In Big Bass Lake, a control lake which receives no street runoff, the phytoplankton population is much smaller than in Lake Dicie. Variations in the concentration of phytoplankton appear to be more closely related to rainfall (the major source of nitrogen and phosphorus for Big Bass Lake) than to the seasonal turnover in the lake.

Florida↗
USGS2025

Using long-term ecological datasets to unravel the impacts of short-term meteorological disturbances on phytoplankton communities

Extreme meteorological events such as storms are increasing in frequency and intensity, but our knowledge of their impacts on aquatic ecosystems and emergent system properties is limited. Understanding the ecological impacts of storms on the dynamics of primary producers remains a challenge that needs to be addressed to assess the vulnerability of freshwater ecosystems to extreme weather conditions and climate change. One promising approach to gain insights into storm impacts on phytoplankton community dynamics is to analyse long-term monitoring datasets. However, such an approach requires disentangling the impacts of short-term meteorological disturbances from the effects of the seasonal trajectories of meteorological conditions. To this end, we applied boosted regression tree models to phytoplankton time series from eight relatively large lakes on four continents, coupled with a procedure adapted to detect and quantify rare events. Overall, the patterns and potential drivers we identified provide important insights into the responses of lakes to short-term meteorological events and highlight differences in the response of phytoplankton communities according to lake morphological characteristics. Our results indicated that deepened thermoclines and lake-specific combinations of drivers describing altered thermal structures caused deviations from the typical trajectories of seasonal phytoplankton succession. For shallow polymictic lakes, shifts in phytoplankton succession also depended on changes in light availability. Overall, our study highlights the value of long-term monitoring to improve our understanding of phytoplankton sensitivity to short-term meteorological disturbances.

Freshwater Biology↗
USGS2023

Diverse portfolios: Investing in tributaries for restoration of large river fishes in the Anthropocene

Rehabilitation of large Anthropocene rivers requires engagement of diverse stakeholders across a broad range of sociopolitical boundaries. Competing objectives often constrain options for ecological restoration of large rivers whereas fewer competing objectives may exist in a subset of tributaries. Further, tributaries contribute toward building a “portfolio” of river ecosystem assets through physical and biological processes that may present opportunities to enhance the resilience of large river fishes. Our goal is to review roles of tributaries in enhancing mainstem large river fish populations. We present case histories from two greatly altered and distinct large-river tributary systems that highlight how tributaries contribute four portfolio assets to support large-river fish populations: 1) habitat diversity, 2) connectivity, 3) ecological asynchrony, and 4) density-dependent processes. Finally, we identify future research directions to advance our understanding of tributary roles and inform conservation actions. In the Missouri River United States, we focus on conservation efforts for the state endangered lake sturgeon, which inhabits large rivers and tributaries in the Midwest and Eastern United States. In the Colorado River, Grand Canyon United States, we focus on conservation efforts for recovery of the federally threatened humpback chub. In the Missouri River, habitat diversity focused on physical habitats such as substrate for reproduction, and deep-water habitats for refuge, whereas augmenting habitat diversity for Colorado River fishes focused on managing populations in tributaries with minimally impaired thermal and flow regimes. Connectivity enhancements in the Missouri River focused on increasing habitat accessibility that may require removal of physical structures like low-head dams; whereas in the Colorado River, the lack of connectivity may benefit native fishes as the disconnection provides refuge from non-native fish predation. Hydrologic variability among tributaries was present in both systems, likely underscoring ecological asynchrony. These case studies also described density dependent processes that could influence success of restoration actions. Although actions to restore populations varied by river system, these examples show that these four portfolio assets can help guide restoration activities across a diverse range of mainstem rivers and their tributaries. Using these assets as a guide, we suggest these can be transferable to other large river-tributary systems.

Frontiers in Environmental Science↗
USGS2014

Diverse coral communities in mangrove habitats suggest a novel refuge from climate change

Risk analyses indicate that more than 90% of the world's reefs will be threatened by climate change and local anthropogenic impacts by the year 2030 under "business-as-usual" climate scenarios. Increasing temperatures and solar radiation cause coral bleaching that has resulted in extensive coral mortality. Increasing carbon dioxide reduces seawater pH, slows coral growth, and may cause loss of reef structure. Management strategies include establishment of marine protected areas with environmental conditions that promote reef resiliency. However, few resilient reefs have been identified, and resiliency factors are poorly defined. Here we characterize the first natural, non-reef coral refuge from thermal stress and ocean acidification and identify resiliency factors for mangrove–coral habitats. We measured diurnal and seasonal variations in temperature, salinity, photosynthetically active radiation (PAR), and seawater chemistry; characterized substrate parameters; and examined water circulation patterns in mangrove communities where scleractinian corals are growing attached to and under mangrove prop roots in Hurricane Hole, St. John, US Virgin Islands. Additionally, we inventoried the coral species and quantified incidences of coral bleaching, mortality, and recovery for two major reef-building corals, Colpophyllia natans and Diploria labyrinthiformis , growing in mangrove-shaded and exposed (unshaded) areas. Over 30 species of scleractinian corals were growing in association with mangroves. Corals were thriving in low-light (more than 70% attenuation of incident PAR) from mangrove shading and at higher temperatures than nearby reef tract corals. A higher percentage of C. natans colonies were living shaded by mangroves, and no shaded colonies were bleached. Fewer D. labyrinthiformis colonies were shaded by mangroves, however more unshaded colonies were bleached. A combination of substrate and habitat heterogeneity, proximity of different habitat types, hydrographic conditions, and biological influences on seawater chemistry generate chemical conditions that buffer against ocean acidification. This previously undocumented refuge for corals provides evidence for adaptation of coastal organisms and ecosystem transition due to recent climate change. Identifying and protecting other natural, non-reef coral refuges is critical for sustaining corals and other reef species into the future.

Biogeosciences↗
USGS2003

Sex differences in the thermoregulation and evaporative water loss of a heterothermic bat, Lasiurus cinereus, during its spring migration

This study quantifies sex differences in thermoregulation and water loss of a small (20-35 g) insectivorous heterothermic mammal, the hoary bat Lasiurus cinereus , during its spring migration. We measured body temperature, metabolic rate and evaporative water loss, and calculated wet thermal conductance, for bats exposed to air temperatures ranging from 0 to 40°C for periods of 2-5 h. Pregnant females maintained normothermic body temperatures (35.7±0.7°C; mean ± s.e.m. ) independent of air temperature. In contrast, males became torpid during the majority (68%) of exposures to air temperatures <25°C. The thermal neutral zone (TNZ) ranged between approximately 30°C and 34°C in both sexes and, within the TNZ, females had lower mass-specific metabolic rates (6.1±0.2 mW g -1 ) than males (9.0±0.9 mW g -1 ). Wet thermal conductance values in torpid bats (0.7±0.5 mW g -1 deg. -1 ) were lower than those of normothermic individuals (1.1±0.3 mW g -1 deg. -1 ). Mass-specific rates of evaporative water loss in males were consistently higher than in females at most air temperatures and rates of water loss in torpid bats were 63±6% of normothermic values. These results suggest that male and pregnant female L. cinereus employ different thermoregulatory strategies during their spring migration. Females defend normothermic body temperatures, presumably to expedite embryonic growth, while males use torpor, presumably to minimize energy and water deficits. These variable thermoregulatory strategies may reflect continental differences in the summer distribution of the sexes.

Journal of Experimental Biology↗
USGS2025

Landscape transcriptomic analysis detects thermal stress responses and potential adaptive variation in wild brook trout (Salvelinus fontinalis) during successive heatwaves

Extreme weather events, such as heatwaves, are becoming more frequent and intense as a result of climate change. Critically, such extreme weather events can be more important drivers of extirpation and selection than changes in annual or seasonal averages and they pose a particularly large threat to poikilothermic organisms. In this study, we evaluated the transcriptomic response of a coldwater adapted fish species, the eastern brook trout ( Salvelinus fontinalis ), to two successive heatwaves during July and August 2022. We sampled brook trout at eight time points from four streams ( N = 116 fish), sequenced mRNA from gill samples using TagSeq, and quantified expression levels of 32,670 unique transcripts. Multivariate analyses found that overall expression patterns in response to water temperature change were similar among streams. These analyses further detected groups of genes involved in immune response and oxygen carrier activity that were upregulated and downregulated respectively at higher water temperatures. We also detected 43 genes that were differentially expressed at different time points and followed the same expression pattern during the two heatwaves. Of these genes, 42 covaried with water temperature and most (27, 62.8 %) exhibited responses that varied by stream. Some of the differentially expressed genes, including heat shock proteins and cold-inducible RNA binding proteins, have been widely linked to temperature responses in experimental studies, whereas other genes we identified have functions that have not been well-studied in relationship to temperature or have unknown functions. This study shows the utility of landscape transcriptomic approaches to identify important biological processes governing wild organismal responses to short-term stressors. The results of this study can guide future investigations to identify phenotypic and genetic diversity that contribute to adaptive responses to heatwaves and improve predictions of how populations will respond to future climate change.

Pennsylvania↗
USGS2025

Cold-induced vomiting of a white-tailed deer (Odocoileus virginianus) by an invasive Burmese python (Python bivitattus) in Big Cypress National Preserve, Florida, USA

The Burmese python ( Python bivittatus ) is native to Southeast Asia and has an established invasive population throughout South Florida. As part of the effort to understand invasive python biology and potential impacts to the native ecosystem, we have been using radio-telemetry to investigate feeding rates of adult female pythons. The body size and gape of adult Burmese pythons enable them to consume large native prey items including, but not limited to, white-tailed deer ( Odocoileus virginianus ). As an ectothermic species, Burmese pythons' physiological processes, including digestion, are temperature dependent, which may limit their potential invasive range. The low temperature threshold for python digestion is thought to be 20°C within a laboratory setting. Here, we detail an observation of a radio-telemetered female Burmese python that ingested an adult white-tailed deer, retained the deer within the digestive tract for 10 days, and then vomited the deer coinciding with a drop in air temperature as low as 9.4°C. The python survived the vomiting and was alive at the time of publication. To our knowledge, this is the first observation of a free-ranging Burmese python vomiting a deer within the invasive range without direct disturbance from humans at the time of vomiting. This observation provides additional evidence regarding the limits of thermal tolerance, digestion, and feeding habits of invasive Burmese pythons.

Florida↗
USGS2018

The potential of high-frequency profiling to assess vertical and seasonal patterns of phytoplankton dynamics in lakes: An extension of the Plankton Ecology Group (PEG) model

The use of high-frequency sensors on profiling buoys to investigate physical, chemical, and biological processes in lakes is increasing rapidly. Profiling buoys with automated winches and sensors that collect high-frequency chlorophyll fluorescence (ChlF) profiles in 11 lakes in the Global Lake Ecological Observatory Network (GLEON) allowed the study of the vertical and temporal distribution of ChlF, including the formation of subsurface chlorophyll maxima (SSCM). The effectiveness of 3 methods for sampling phytoplankton distributions in lakes, including (1) manual profiles, (2) single-depth buoys, and (3) profiling buoys were assessed. High-frequency ChlF surface data and profiles were compared to predictions from the Plankton Ecology Group (PEG) model. The depth-integrated ChlF dynamics measured by the profiling buoy data revealed a greater complexity that neither conventional sampling nor the generalized PEG model captured. Conventional sampling techniques would have missed SSCM in 7 of 11 study lakes. Although surface-only ChlF data underestimated average water column ChlF, at times by nearly 2-fold in 4 of the lakes, overall there was a remarkable similarity between surface and mean water column data. Contrary to the PEG model’s proposed negligible role for physical control of phytoplankton during the growing season, thermal structure and light availability were closely associated with ChlF seasonal depth distribution. Thus, an extension of the PEG model is proposed, with a new conceptual framework that explicitly includes physical metrics to better predict SSCM formation in lakes and highlight when profiling buoys are especially informative.

Inland Waters↗
USGS2025

Chemostratigraphy of the Cretaceous Hue Shale in Arctic Alaska: Exploring paleoceanographic controls on trace element enrichment, organic matter accumulation, and source-rock evolution

We document chemostratigraphy in an outcrop of late Albian to early Campanian (∼103–82 Ma) marine source rocks to better understand paleoenvironmental controls on trace element (TE) enrichment and organic matter accumulation in the distal Colville foreland basin of Arctic Alaska and how those drivers are linked to arc volcanism and successions of Cretaceous oceanographic and climatic biogeochemical events. This unique, 113-m-thick section of Cretaceous Hue Shale deposited during a series of previously undocumented Arctic Cretaceous oceanic anoxic events (Lease et al., 2024) is the only known exposure of thermally immature (0.48–0.52% R o , random vitrinite reflectance) Hue Shale in Arctic Alaska. Strata comprise mainly clay-rich mudstone with elevated total organic carbon (TOC) and hydrogen index values reaching 26.3 wt% (mean = 7.5 wt%) and 689 mg hydrocarbon (HC)/g TOC (mean = 385 mg HC/g TOC), respectively. Maceral composition consists predominantly of fluorescent amorphous organic matter, with abundant brightly fluorescent alginite, including Tasmanites , acritarchs, and Leiosphaeridia . Discrete layers of volcanic ash (preserved as bentonite) are present throughout the section and provide quantitative age control based on U–Pb dates. Chemostratigraphic trends are investigated to advance our understanding of local oceanographic conditions and controls on stratigraphic and temporal heterogeneity of Brookian source rocks. Concurrent sedimentary enrichment in Mo, U, V, Pb, and Cu across the Albian–Cenomanian boundary of the exposed basal gamma-ray zone, may reflect anoxic to euxinic benthic redox conditions favoring organic matter accumulation and preservation. Fluctuating degrees of anoxia-euxinia are inferred throughout the overlying Hue Shale succession, reflected by varying patterns of TE enrichment and TE–TOC covariation. Elevated C org /P molar ratios (>250) across most of the section, with several values exceeding 690, signify that enhanced biological productivity is sustained throughout deposition. Enhanced productivity, recorded by both C org /P and excess Ba, also parallels increases in source rock richness (elevated TOC and S 2 values) during the late Albian–early Cenomanian and late Cenomanian – Turonian. Enhanced productivity and variations in oceanic circulation/stratification likely both drove changes in benthic redox conditions that favored organic carbon accumulation and preservation. Increased continental arc volcanism (e.g., Okhotsk–Chukotka volcanic belt) and High Arctic Large Igneous Province magmatic eruptions throughout the Cretaceous, inferred to have influenced nutrient cycling and local aqueous nutrient availability, also have been invoked as potential drivers of organic carbon burial and source-rock development across the sedimentary sequence. Results presented here document the organic-rich and oil-prone source-rock quality of the Hue Shale in the distal part of the Colville foreland basin and bolster the potential for a Cretaceous petroleum system beneath the eastern North Slope.

Alaska↗
USGS2022

The past, present, and future of coral reef growth in the Florida Keys

Coral-reef degradation is driving global-scale reductions in reef-building capacity and the ecological, geological, and socioeconomic functions it supports. The persistence of those essential functions will depend on whether coral-reef management is able to rebalance the competing processes of reef accretion and erosion. Here, we reconstructed census-based carbonate budgets of 46 reefs throughout the Florida Keys from 1996 to 2019. We evaluated the environmental and ecological drivers of changing budget states and compared historical trends in reef-accretion potential to millennial-scale baselines of accretion from reef cores and future projections with coral restoration. We found that historically, most reefs had positive carbonate budgets, and many had reef-accretion potential comparable to the ~3 mm year −1 average accretion rate during the peak of regional reef building ~7000 years ago; however, declines in reef-building Acropora palmata and Orbicella spp. corals following a series of thermal stress events and coral disease outbreaks resulted in a shift from positive to negative budgets for most reefs in the region. By 2019, only ~15% of reefs had positive net carbonate production. Most of those reefs were in inshore, Lower Keys patch-reef habitats with low water clarity, supporting the hypothesis that environments with naturally low irradiance may provide a refugia from thermal stress. We caution that our estimated carbonate budgets are likely overly optimistic; comparison of reef-accretion potential to measured accretion from reef cores suggests that, by not accounting for the role of nonbiological physical and chemical erosion, census-based carbonate budgets may underestimate total erosion by ~1 mm year −1 (−1.15 kg CaCO 3 m −2 year −1 ). Although the present state of Florida's reefs is dire, we demonstrate that the restoration of reef-building corals has the potential to help mitigate declines in reef accretion in some locations, which could allow some key ecosystem functions to be maintained until the threat of global climate change is addressed.

Florida↗
USGS2023

Linked foraging and bioenergetics modeling may inform fish parasite infection dynamics

The parasitic copepod Salmincola californiensis infects Pacific salmon and trout ( Oncorhynchus spp.) and often reaches high prevalence and intensity in reservoirs compared to stream systems. Recent research indicates that temperature plays a fundamental role in copepod development and fish susceptibility. Here, we expand a linked foraging and bioenergetics model to simulate infection risk. Based on juvenile salmon vertical migration patterns, we add estimates of copepod generations produced and thermal strata metrics that appear associated with copepodid aggregations and increased infection. Severe damage on hosts may be caused by the infectious copepodid, a life-stage not readily visible and thus not detectable using traditional fish screenings. We discuss model limitations, opportunities for future research, and the potential for inclusion of copepod expansion equations to existing linked bioenergetics models or observed behaviors of salmonids in other lentic systems. We demonstrate that using a temperature sensitive model framework that includes copepod infection dynamics is useful in interpreting other lines of evidence, such as fish mortality estimates. Collectively, our work provides a testable framework for future comparisons of infection potential and demonstrates how bioenergetics models may be useful in understanding host–parasite interactions.

Environmental Biology of Fishes↗
USGS2023

Multi-scale relationships in thermal limits within and between two cold-water frog species uncover different trends in physiological vulnerability

1. Critical thermal limits represent an important component of an organism's capacity to cope with future temperature changes. Understanding the drivers of variation in these traits may uncover patterns in physiological vulnerability to climate change. Local temperature extremes have emerged as a major driver of thermal limits, although their effects can be mediated by the exploitation of fine-scale spatial variation in temperature through behavioural thermoregulation. 2. Here, we investigated thermal limits along elevation gradients within and between two cold-water frog species ( Ascaphus spp.), one with a coastal distribution ( A. truei ) and the other with a continental range ( A. montanus ). We quantified thermal limits for over 700 tadpoles, representing multiple populations from each species. We combined local temporal and fine-scale spatial temperature data to quantify local thermal landscapes (i.e., thermalscapes), including the opportunity for behavioural thermoregulation. 3. Lower thermal limits for either species could not be reached experimentally without the water freezing, suggesting that cold tolerance is <0.3°C. By contrast, upper thermal limits varied among populations, but this variation only reflected local temperature extremes in A . montanus , perhaps as a consequence of the greater variation in stream temperatures across its range. Lastly, we found minimal fine-scale spatial variability in temperature, suggesting limited opportunity for behavioural thermoregulation and thus increased vulnerability to warming for all populations. 4. By quantifying local thermalscapes, we uncovered different trends in the relative vulnerability of populations across elevation for each species. In A . truei , physiological vulnerability decreased with elevation, whereas in A . montanus , all populations were equally physiologically vulnerable. These results highlight how similar environments can differentially shape physiological tolerance and patterns of vulnerability of species, and in turn impact their vulnerability to future warming.

Montana↗