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At least 181 records · Page 10Linked to original sources
USGS2021

Quantifying the representation of plant communities in the protected areas of the U.S.: An analysis based on the U.S. National Vegetation Classification Groups

Plant communities represent the integration of ecological and biological processes and they serve as an important component for the protection of biological diversity. To measure progress towards protection of ecosystems in the United States for various stated conservation targets we need datasets at the appropriate thematic, spatial, and temporal resolution. The recent release of the LANDFIRE Existing Vegetation Data Products (2016 Remap) with a legend based on U.S. National Vegetation Classification allowed us to assess the conservation status of plant communities of the U.S. The map legend is based on the Group level of the USNVC, which characterizes the regional differences in plant communities based on dominant and diagnostic plant species. By combining the Group level map with the Protected Areas Database of the United States (PAD-US Ver 2.1), we quantified the representation of each Group. If the mapped vegetation is assumed to be 100% accurate, using the Aichi Biodiversity target (17% land in protection by 2020) we found that 159 of the 265 natural Groups have less than 17% in GAP Status 1 & 2 lands and 216 of the 265 Groups fail to meet a 30% representation target. Only four of the twenty ecoregions have >17% of their extent in Status 1 & 2 lands. Sixteen ecoregions are dominated by Groups that are under-represented. Most ecoregions have many hectares of natural or ruderal vegetation that could contribute to future conservation efforts and this analysis helps identify specific targets and opportunities for conservation across the U.S.

Forests↗
USGS2003

Mapping the seabed and habitats in National Marine Sanctuaries - Examples from the East, Gulf and West Coasts

The National Marine Sanctuary System requires seabed and habitat maps to serve as a basis for managing sanctuary resources and for conducting research. NOAA, the agency that manages the sanctuaries, and the USGS have conducted mapping projects in three sanctuaries (Stellwagen Bank NMS, Flower Garden Banks NMS, and Channel Islands NMS) with an emphasis on collaboration of geologists and biologists from the two agencies and from academic institutions. Mapping of seabed habitats is a developing field that requires the integration of geologic and biologic studies and the use of swath imaging techniques such as multibeam and sidescan sonar. Major products of swath mapping are shaded-relief topographic imagery which shows seabed features in great detail, and backscatter imagery which provides an indication of the types of materials that constitute the seabed. Sea floor images provide an excellent basis for conducting the groundtruthing studies (using video, photo, and sampling techniques) that are required to collect the data necessary for making meaningful interpretative maps of the seabed. The compilation of interpretive maps showing seabed environments and habitats also requires the development of a sea floor classification system that will be a basis for comparing, managing, and researching characteristic areas of the seabed. Seabed maps of the sanctuaries are proving useful for management and research decisions that address commercial and recreational fishing, habitat disturbance, engineering projects, tourism, and cultural resources.

Marine Technology Society Journal↗
USGS2011

Trends in marine debris in the U.S. Caribbean and the Gulf of Mexico, 1996-2003

Marine debris is a widespread and globally recognized problem. Sound information is necessary to understand the extent of the problem and to inform resource managers and policy makers about potential mitigation strategies. Although there are many short-term studies on marine debris, a longer-term perspective and the ability to compare among regions has heretofore been missing in the U.S. Caribbean and the Gulf of Mexico. We used data from a national beach monitoring program to evaluate and compare amounts, composition, and trends of indicator marine debris in the U.S. Caribbean (Puerto Rico and the U.S. Virgin Islands) and the Gulf of Mexico from 1996 to 2003. Indicator items provided a standardized set that all surveys collected; each was assigned a probable source: ocean-based, land-based, or general-source. Probable ocean-based debris was related to activities such as recreational boating/fishing, commercial fishing and activities on oil/gas platforms. Probable land-based debris was related to land-based recreation and sewer systems. General-source debris represented plastic items that can come from either ocean- or land-based sources; these items were plastic bags, strapping bands, and plastic bottles (excluding motor oil containers). Debris loads were similar between the U.S. Caribbean and the western Gulf of Mexico; however, debris composition on U.S. Caribbean beaches was dominated by land-based indicators while the western Gulf of Mexico was dominated by ocean-based indicators. Beaches along the eastern Gulf of Mexico had the lowest counts of debris; composition was dominated by land-based indicators, similar to that found for the U.S. Caribbean. Debris loads on beaches in the Gulf of Mexico are likely affected by Gulf circulation patterns, reducing loads in the eastern Gulf and increasing loads in the western Gulf. Over the seven years of monitoring, we found a large linear decrease in total indicator debris, as well as all source categories, for the U.S. Caribbean. Lower magnitude decreases were seen in indicator debris along the eastern Gulf of Mexico. In contrast, only land-based indicators declined in the western Gulf of Mexico; total, ocean-based and general-source indicators remained unchanged. Decreases in land-based indicators were not related to human population in the coastal regions; human population increased in all regions over the time of the study. Significant monthly patterns for indicator debris were found only in the Gulf of Mexico; counts were highest during May through September, with peaks occurring in July. Inclement weather conditions before the time of the survey also accounted for some of the variation in the western Gulf of Mexico; fewer items were found when there were heavy seas or cold fronts in the weeks prior to the survey, while tropical storms (including hurricanes) increased the amount of debris. With the development around the globe of long-term monitoring programs using standardized methodology, there is the potential to help management at individual sites, as well as generate larger-scale perspectives (from regional to global) to inform decision makers. Incorporating mechanisms producing debris into marine debris programs would be a fruitful area for future research.

Gulf of Mexico and U.S. Carribean↗
USGS2009

Streamflow and fluvial sediment transport in Pool C, restored section of the Kissimmee River

The Kissimmee River Restoration Project was authorized by Congress in 1992 to restore more than 64 km2 (square kilometers) of river/floodplain ecosystem including 69 km of meandering river channel and 10,900 hectares (ha) of wetlands. Although biologic monitoring is an integral and active part of the Kissimmee River restoration, by 2007 geomorphic monitoring that included sediment transport was lacking. In 2007, the U.S. Geological Survey (USGS) entered into a cooperative agreement with the South Florida Water Management District (SFWMD) to determine sediment transport characteristics of the restored section of the Kissimmee River in Pool C. Sediment transport characteristics that are monitored include suspended-sediment concentrations and loads, bedload, and bed material. In addition, the organic content of suspended sediment and bedload was determined. This chapter describes methods and results of the sediment transport monitoring from July 2007 through September 2008 in the Kissimmee River in Pool C.

Florida↗
USGS2006

Hydrologic landscape units and adaptive management of intermountain wetlands

daptive management is often proposed to assist in the management of national wildlife refuges and allows the exploration of alternatives as well as the addition of ne w knowledge as it becomes available. The hydrological landscape unit can be a good foundation for such efforts. Red Rock Lakes National Wildlife Refuge (NWR) is in an intermountain basin dominated by vertical tectonics in the Northern Rocky Mountains. A geographic information system was used to define the boundaries for the hydrologic landscape units there. Units identified include alluvial fan, interfan, stream alluvi um and basin flat. Management alternatives can be informed by ex amination of processes that occu r on the units. For example, an ancient alluvial fan unit related to Red Rock Creek appear s to be isolated from stream flow today, with recharge dominated by precipitation and bedrock springs; while other alluvial fan units in the area have shallow ground water recharged from mountain streams and precipitation. The scale of hydrologic processes in interfan units differs from that in alluvial fan hydrologic landscape units. These differences are important when the refuge is evaluating habitat management activities. Hydrologic landscape units provide scientific unde rpinnings for the refuge’s comprehensive planning process. New geologic, hydrologic, and biologic knowledge can be integrated into the hydrologic landscape unit definition and improve adaptive management.

Montana↗
USGS2013

Environmental clustering of lakes to evaluate performance of a macrophyte index of biotic integrity

Proper classification of sites is critical for the use of biological indices that can distinguish between natural and human-induced variation in biological response. The macrophyte-based index of biotic integrity was developed to assess the condition of Minnesota lakes in relation to anthropogenic stressors, but macrophyte community composition varies naturally across the state. The goal of the study was to identify environmental characteristics that naturally influence macrophyte index response and establish a preliminary lake classification scheme for biological assessment (bioassessment). Using a comprehensive set of environmental variables, we identified similar groups of lakes by clustering using flexible beta classification. Variance partitioning analysis of IBI response indicated that evaluating similar lake clusters could improve the ability of the macrophyte index to identify community change to anthropogenic stressors, although lake groups did not fully account for the natural variation in macrophyte composition. Diagnostic capabilities of the index could be improved when evaluating lakes with similar environmental characteristics, suggesting the index has potential for accurate bioassessment provided comparable groups of lakes are evaluated.

Minnesota↗
USGS2022

What common-garden experiments tell us about climate responses in plants

Common garden experiments are indoor or outdoor plantings of species or populations collected from multiple distinct geographic locations, grown together under shared conditions. These experiments examine a range of questions for theory and application using a variety of methods for analysis. The eight papers of this special feature comprise a cross section of contemporary approaches, summarized and synthesized here by what they tell us about the relationships between climate-related trait spectra and fitness optima. Four of the eight papers are based on field experiments in prairie, desert, Mediterranean and boreal biomes. Representative of many common garden experiments, these experiments reveal consistent evidence of traits varying with population climate provenance, but evidence of a tradeoff between growth and tolerance traits or of consistent fitness optimization at home is scant, in contrast to trait theory. Two synthesis papers highlight dominant patterns of trait divergence, including for an exotic invasive species. One theoretical paper warned that unknown kinship relationships between populations can result in the misidentification of adaptive trait divergence. A third synthesis paper formulated novel and ambitious goals for common-garden studies through including measurement of response variables at multiple levels of biological organization. The featured papers discuss multiple avenues for improving common garden studies. Genomic analysis, together with the quantification of kinship relationships, will continue to reveal the influence of environmental drivers on gene selection. Measuring a more complete set of fitness traits, especially for traits related to regeneration, will permit the development of projection models to explicitly link trait spectra, climate patterns and fitness consequences. More standardized data reporting will additionally improve abilities to synthesize findings across experiments. Testing population performance in competition with other species will produce more robust fitness comparisons between genotypes, especially for slower-growing genotypes in higher-resource environments. Adding gardens in and beyond climatic edge locations will furthermore strengthen the understanding of population failure and species exclusion. Finally, there is unrealized potential in adding ecosystem-level observations to common-garden studies that will enhance integrative analysis across scales of biological organization and scientific domains. Synthesis . With novel, creative designs, data integration and synthesis, common garden experiments will continue to advance the understanding of trait ensembles interacting with climate across scales of biological organization, provide pivotal data for global change models and guide ecological applications such as restoration of habitats for rare and climate sensitive species.

Journal of Ecology↗
USGS1998

Evaluating landscape health: Integrating societal goals and biophysical process

Evaluating landscape change requires the integration of the social and natural sciences. The social sciences contribute to articulating societal values that govern landscape change, while the natural sciences contribute to understanding the biophysical processes that are influenced by human activity and result in ecological change. Building upon Aldo Leopold's criteria for landscape health, the roles of societal values and biophysical processes in shaping the landscape are explored. A framework is developed for indicators of landscape health and integrity. Indicators of integrity are useful in measuring biological condition relative to the condition in landscapes largely unaffected by human activity, while indicators of health are useful in evaluating changes in highly modified landscapes. Integrating societal goals and biophysical processes requires identification of ecological services to be sustained within a given landscape. It also requires the proper choice of temporal and spatial scales. Societal values are based upon inter-generational concerns at regional scales (e.g. soil and ground water quality). Assessing the health and integrity of the environment at the landscape scale over a period of decades best integrates societal values with underlying biophysical processes. These principles are illustrated in two contrasting case studies: (1) the South Platte River study demonstrates the role of complex biophysical processes acting at a distance; and (2) the Kissimmee River study illustrates the critical importance of social, cultural and economic concerns in the design of remedial action plans. In both studies, however, interactions between the social and the biophysical governed the landscape outcomes. The legacy of evolution and the legacy of culture requires integration for the purpose of effectively coping with environmental change.

Journal of Environmental Management↗
USGS2005

Integrating habitat status, human population pressure, and protection status into biodiversity conservation priority setting

Priority setting is an essential component of biodiversity conservation. Existing methods to identify priority areas for conservation have focused almost entirely on biological factors. We suggest a new relative ranking method for identifying priority conservation areas that integrates both biological and social aspects. It is based on the following criteria: the habitat's status, human population pressure, human efforts to protect habitat, and number of endemic plant and vertebrate species. We used this method to rank 25 hotspots, 17 megadiverse countries, and the hotspots within each megadiverse country. We used consistent, comprehensive, georeferenced, and multiband data sets and analytical remote sensing and geographic information system tools to quantify habitat status, human population pressure, and protection status. The ranking suggests that the Philippines, Atlantic Forest, Mediterranean Basin, Caribbean Islands, Caucasus, and Indo-Burma are the hottest hotspots and that China, the Philippines, and India are the hottest megadiverse countries. The great variation in terms of habitat, protected areas, and population pressure among the hotspots, the megadiverse countries, and the hotspots within the same country suggests the need for hotspot- and country-specific conservation policies.

Conservation Biology↗
USGS2008

Cost-effective management alternatives for Snake river chinook salmon: A biological-economic synthesis

The mandate to increase endangered salmon populations in the Columbia River Basin of North America has created a complex, controversial resource-management issue. We constructed an integrated assessment model as a tool for analyzing biological-economic trade-offs in recovery of Snake River spring- and summer-run chinook salmon (Oncorhynchus tshawytscha). We merged 3 frameworks: a salmon-passage model to predict migration and survival of smolts; an age-structured matrix model to predict long-term population growth rates of salmon stocks; and a cost-effectiveness analysis to determine a set of least-cost management alternatives for achieving particular population growth rates. We assessed 6 individual salmon-management measures and 76 management alternatives composed of one or more measures. To reflect uncertainty, results were derived for different assumptions of effectiveness of smolt transport around dams. Removal of an estuarine predator, the Caspian Tern (Sterna caspia), was cost-effective and generally increased long-term population growth rates regardless of transport effectiveness. Elimination of adult salmon harvest had a similar effect over a range of its cost estimates. The specific management alternatives in the cost-effective set depended on assumptions about transport effectiveness. On the basis of recent estimates of smolt transport effectiveness, alternatives that discontinued transportation or breached dams were prevalent in the cost-effective set, whereas alternatives that maximized transportation dominated if transport effectiveness was relatively high. More generally, the analysis eliminated 80-90% of management alternatives from the cost-effective set. Application of our results to salmon management is limited by data availability and model assumptions, but these limitations can help guide research that addresses critical uncertainties and information. Our results thus demonstrate that linking biology and economics through integrated models can provide valuable tools for science-based policy and management.

Conservation Biology↗
USGS2018

Integrated observations and informatics improve understanding of changing marine ecosystems

Marine ecosystems have numerous benefits for human societies around the world and many policy initiatives now seek to maintain the health of these ecosystems. To enable wise decisions, up to date and accurate information on marine species and the state of the environment they live in is required. Moreover, this information needs to be openly accessible to build indicators and conduct timely assessments that decision makers can use. The questions and problems being addressed demand global-scale investigations, transdisciplinary science, and mechanisms to integrate and distribute data that otherwise would appear to be disparate. Essential Ocean Variables (EOVs) and marine Essential Biodiversity Variables (EBVs), conceptualized by the Global Ocean Observing System (GOOS) and the Marine Biodiversity Observation Network (MBON), respectively, guide observation of the ocean. Additionally, significant progress has been made to coordinate efforts between existing programs, such as the GOOS, MBON, and Ocean Biogeographic Information System collaboration agreement. Globally and nationally relevant indicators and assessments require increased sharing of data and analytical methods, sustained long-term and large-scale observations, and resources to dedicated to these tasks. We propose a vision and key tenets as a guiding framework for building a global integrated system for understanding marine biological diversity and processes to address policy and resource management needs. This framework includes: using EOVs and EBVs and implementing the guiding principles of Findable, Accessible, Interoperable, Reusable (FAIR) data and action ecology. In doing so, we can encourage relevant, rapid, and integrative scientific advancement that can be implemented by decision makers to maintain marine ecosystem health.

Frontiers in Marine Science↗
USGS2017

Prior knowledge-based approach for associating contaminants with biological effects: A case study in the St. Croix River basin, MN, WI, USA

Evaluating potential adverse effects of complex chemical mixtures in the environment is challenging. One way to address that challenge is through more integrated analysis of chemical monitoring and biological effects data. In the present study, water samples from five locations near two municipal wastewater treatment plants in the St. Croix River basin, on the border of MN and WI, USA, were analyzed for 127 organic contaminants. Known chemical-gene interactions were used to develop site-specific knowledge assembly models (KAMs) and formulate hypotheses concerning possible biological effects associated with chemicals detected in water samples from each location. Additionally, hepatic gene expression data were collected for fathead minnows ( Pimephales promelas ) exposed in situ , for 12 d, at each location. Expression data from oligonucleotide microarrays were analyzed to identify functional annotation terms enriched among the differentially-expressed probes. The general nature of many of the terms made hypothesis formulation on the basis of the transcriptome-level response alone difficult. However, integrated analysis of the transcriptome data in the context of the site-specific KAMs allowed for evaluation of the likelihood of specific chemicals contributing to observed biological responses. Thirteen chemicals (atrazine, carbamazepine, metformin, thiabendazole, diazepam, cholesterol, p-cresol, phenytoin, omeprazole, ethyromycin, 17β-estradiol, cimetidine, and estrone), for which there was statistically significant concordance between occurrence at a site and expected biological response as represented in the KAM, were identified. While not definitive, the approach provides a line of evidence for evaluating potential cause-effect relationships between components of a complex mixture of contaminants and biological effects data, which can inform subsequent monitoring and investigation.

Minnesota, Wisconsin↗
USGS2013

Ecological health in the Nation's streams

Aquatic biological communities, which are collections of organisms, are a direct measure of stream health because they indicate the ability of a stream to support life. This fact sheet highlights selected findings of a national assessment of stream health by the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey (USGS). The assessment was unique in that it integrated the condition of three biological communities—algae, macroinvertebrates, and fish—as well as measures of streamflow modification, pesticides, nutrients, and other factors. At least one biological community was altered at 83 percent of assessed streams, and the occurrence of altered communities was highest in urban streams. Streamflows were modified at 86 percent of assessed streams, and increasing severity of streamflow modification was associated with increased occurrence of altered biological communities. Agricultural and urban land use in watersheds may contribute pesticides and nutrients to stream waters, and increasing concentrations of these chemicals were associated with increased occurrence of altered biological communities.

Fact Sheet↗
USGS2009

Research in thermal biology: Burning questions for coldwater stream fishes

With the increasing appreciation of global warming impacts on ecological systems, in addition to the myriad of land management effects on water quality, the number of literature citations dealing with the effects of water temperature on freshwater fish has escalated in the past decade. Given the many biological scales at which water temperature effects have been studied, and the growing need to integrate knowledge from multiple disciplines of thermal biology to fully protect beneficial uses, we held that a survey of the most promising recent developments and an expression of some of the remaining unanswered questions with significant management implications would best be approached collectively by a diverse research community. We have identified five specific topic areas of renewed research where new techniques and critical thought could benefit coldwater stream fishes (particularly salmonids): molecular, organism, population/species, community and ecosystem, and policy issues in water quality. Our hope is that information gained through examination of recent research fronts linking knowledge at various scales will prove useful in managing water quality at a basin level to protect fish populations and whole ecosystems. Standards of the past were based largely on incipient lethal and optimum growth rate temperatures for fish species, while future standards should consider all integrated thermal impacts to the organism and ecosystem. ?? Taylor and Francis Group, LLC.

Reviews in Fisheries Science↗
USGS2021

A renewed philosophy about supplemental sea lamprey controls

Invasive sea lamprey ( Petromyzon marinus ) populations in the Laurentian Great Lakes have been reduced by up to 90% through the use of selective pesticides (lampricides) and physical sea lamprey barriers that block spawning migrations. Nevertheless, other control methods are needed to achieve integrated pest management objectives, delay biological resistance, and address societal pressure to reduce pesticide use and restore lotic connectivity through dam removals. Despite decades of research and scientific advances, new control tools that focus on controlling adult and juvenile life stages have been rare because tactics have not been cost-effective alternatives to lampricides and sea lamprey barriers. Here, we propose a renewed philosophy highlighting that new control methods need not be true alternatives to lampricides and sea lamprey barriers (i.e., have similar effectiveness), but instead can be useful as supplemental controls integrated with current methods, especially in places where current methods are less effective due to environmental or societal conditions. Current case studies pairing multiple supplemental controls together on two Lake Huron tributaries, the Black Mallard and Cheboygan Rivers, have shown promise in reducing sea lamprey reproductive success, the scope of lampricide treatments, and ultimately the number of juvenile sea lampreys produced. Additional case studies are planned and will be evaluated within a decade-long adaptive assessment plan.

Journal of Great Lakes Research↗
USGS2003

Integrated field and laboratory tests to evaluate effects of metals-impacted wetlands on amphibians: A case study from Montana

Mining activities frequently impact wildlife habitats, and a wide range of habitats may require evaluations of the linkages between wildlife and environmental stressors common to mining activities (e.g., physical alteration of habitat, releases of chemicals such as metals and other inorganic constituents as part of the mining operation). Wetlands, for example, are frequently impacted by mining activities. Within an ecological assessment for a wetland, toxicity evaluations for representative species may be advantageous to the site evaluation, since these species could be exposed to complex chemical mixtures potentially released from the site. Amphibian species common to these transition zones between terrestrial and aquatic habitats are one key biological indicator of exposure, and integrated approaches which involve both field and laboratory methods focused on amphibians are critical to the assessment process. The laboratory and field evaluations of a wetland in western Montana illustrates the integrated approach to risk assessment and causal analysis. Here, amphibians were used to evaluate the potential toxicity associated with heavy metal-laden sediments deposited in a reservoir. Field and laboratory methods were applied to a toxicity assessment for metals characteristic of mine tailings to reduce potential "lab to field" extrapolation errors and provide adaptive management programs with critical site-specific information targeted on remediation.

Conference Paper↗
USGS2016

Coupled downscaled climate models and ecophysiological metrics forecast habitat compression for an endangered estuarine fish

Climate change is driving rapid changes in environmental conditions and affecting population and species’ persistence across spatial and temporal scales. Integrating climate change assessments into biological resource management, such as conserving endangered species, is a substantial challenge, partly due to a mismatch between global climate forecasts and local or regional conservation planning. Here, we demonstrate how outputs of global climate change models can be downscaled to the watershed scale, and then coupled with ecophysiological metrics to assess climate change effects on organisms of conservation concern. We employed models to estimate future water temperatures (2010–2099) under several climate change scenarios within the large heterogeneous San Francisco Estuary. We then assessed the warming effects on the endangered, endemic Delta Smelt, Hypomesus transpacificus , by integrating localized projected water temperatures with thermal sensitivity metrics (tolerance, spawning and maturation windows, and sublethal stress thresholds) across life stages. Lethal temperatures occurred under several scenarios, but sublethal effects resulting from chronic stressful temperatures were more common across the estuary (median >60 days above threshold for >50% locations by the end of the century). Behavioral avoidance of such stressful temperatures would make a large portion of the potential range of Delta Smelt unavailable during the summer and fall. Since Delta Smelt are not likely to migrate to other estuaries, these changes are likely to result in substantial habitat compression. Additionally, the Delta Smelt maturation window was shortened by 18–85 days, revealing cumulative effects of stressful summer and fall temperatures with early initiation of spring spawning that may negatively impact fitness. Our findings highlight the value of integrating sublethal thresholds, life history, and in situ thermal heterogeneity into global change impact assessments. As downscaled climate models are becoming widely available, we conclude that similar assessments at management-relevant scales will improve the scientific basis for resource management decisions.

California↗