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USGS2000

Snowpack chemistry at selected sites in Colorado and New Mexico during winter 1999-2000

Snowpacks at two high-elevation (> 3,000 m) sampling sites near McPhee and Sanchez Reservoirs in southern Colorado were selected to collect representative samples of atmospheric deposition to the surrounding watersheds during winter 1999-2000. In February 2000, annual snowpacks at two sites were sampled to determine concentrations of nitrate and sulfate; concentrations of the trace elements arsenic, mercury, and selenium; and the sulfur isotope ratios that result from atmospheric deposition to the area. Snowpack chemistry data at the two sites sampled in 1999-2000 are compared to 1993-99 averages at 10 other snow-sampling sites in Colorado and New Mexico that generally are downwind of the Four Corners area of the southwestern United States. Although concentrations of ammonium and nitrate in the 1999-2000 snowpacks were fairly typical compared to averages established at nearby sites in southern Colorado and northern New Mexico, chloride and sulfate concentrations were below the 1993-99 average, while arsenic, mercury, and selenium in snow were much below the 1993-99 average. However, very similar sulfur-isotope ratios (that are not a function of precipitation amounts) deposited in snowpacks at the nearby sites indicate the snowpack chemistries at the new sampling locations near McPhee and Sanchez reservoirs were affected by similar sources of sulfate. Representative samples of coal burned during the 1999-2000 snowfall season at three power plants near Four Corners also were analyzed for sulfur content and trace elements. Results from separate, independent laboratories show similar concentrations and provide an initial baseline that will be used for general comparisons of coal chemistry to snowpack chemistry.

Colorado, New Mexico↗

USGS2001

Estimates of nitrogen loads entering Long Island Sound from ground water and streams on Long Island, New York, 1985-96

Fresh ground water that discharges from the northern part of Long Island's aquifer system to Long Island Sound contains elevated concentrations of nitrogen from agricultural fertilizer, domestic waste and fertilizer, and precipitation. The nitrogen contributes to algal blooms, which consume oxygen as the algae die and decompose. The resulting low dissolved oxygen concentrations (hypoxia) adversely affect plant and animal populations in Long Island Sound. The four major streams on the north shore of Long Island that have long-term discharge and water-quality records were selected for analysis of geographic, long-term, and seasonal trends in nitrogen concentration. Nitrogen concentrations generally decrease eastward among three Nassau County streams, then increase again at the easternmost stream, Nissequogue River in Suffolk County. A long-term (1970-96) increase in total nitrogen concentrations in the Nissequogue River also is evident. Seasonal fluctuations in nitrogen concentrations in all four streams reflect chemical reactions and microbial activity in the stream system, so total nitrogen concentrations in the three easternmost streams generally were lowest during summer and highest in winter, whereas those in the westernmost stream (Glen Cove Creek) were highest during summer and lowest in winter. The nitrogen loads discharged to Long Island Sound from each of the four streams for each year during 1985-96 were calculated from the annual mean total nitrogen concentration and the annual mean discharge. Nissequogue River's annual mean discharges were 3 to 6 times larger than those of Glen Cove and Mill Neck Creeks, and produced the largest annual loads of nitrogen--65 to 149 ton/yr (59,000 to 135,000 kg/yr). Cold Spring Brook had the lowest annual mean discharges and annual mean total nitrogen concentrations of the four streams; its annual mean nitrogen load ranged from 1.2 to 2.8 ton/yr (1,100 to 2,500 kg/yr). The nitrogen load carried to Long Island Sound by shallow ground water from the north shore of Long Island was calculated from simulated shallow-aquifer discharges from Nassau and Suffolk Counties (9,200 and 21,400 Mgal/yr or 34,800,000 and 81,100,000 m3/yr, respectively) and median total nitrogen concentrations at selected wells (2.2 and 4.3 milligrams per liter as N, respectively). The resultant nitrogen load was 84 ton/yr (76,500 kg/yr) for Nassau County and 384 ton/yr (349,000 kg/yr) for Suffolk County. The nitrogen load carried to Long Island Sound by deep ground water from the north shore was calculated from simulated deep-aquifer discharges from Nassau and Suffolk counties (13,200 and 47,300 Mgal/yr or 50,000,000 and 179,000,000 m3/yr, respectively). The median nitrogen concentrations of deep ground water for the two counties were 1.62 and 1.34 mg/L as N, respectively. The resultant nitrogen load from deep-aquifer discharge was 89 ton/yr (81,000 kg/yr) for Nassau County and 265 ton/yr (240,000 kg/yr) for Suffolk County. Nitrogen loads entering Long Island Sound from the shallow aquifer underlying three areas of differing land use along the north shore--a sewered residential area in Nassau County, an unsewered residential area in Suffolk County, and an agricultural area in Suffolk County--were evaluated. The agricultural area contains no major streams and, therefore, produces very little surface runoff to Long Island Sound and substantially greater shallow-aquifer discharge than in the sewered and unsewered areas. Ground water in the agricultural area also had the highest median nitrogen concentration (9.9 mg/L as N) of the three land-use areas and discharged the largest estimated nitrogen load to Long Island Sound--152 ton/yr (138,000 kg/yr), which represents about 40 percent of the estimated total nitrogen load from Suffolk County. Ground water in the sewered area had the lowest nitrogen concentration (1.9 mg/L as N) and discharged the smallest nitrogen load to Long Island Sound--7.28 ton/yr (6,600 kg/yr). The analysis indicates that land use on the north shore of Long Island can greatly affect the nitrogen concentration of water in the shallow aquifer and the resultant nitrogen load discharged to Long Island Sound from ground water.

New York↗

USGS2019

Residency, recruitment, and stopover duration of hatch-year Roseate Terns (Sterna dougallii) during the pre-migratory staging period

Avian migratory stopover and staging sites represent important energetic bottlenecks and may influence population dynamics as much as breeding or wintering periods. Roseate terns ( Sterna dougallii ) are an ideal species to examine staging demography because >70% of the entire endangered northwest Atlantic population stages at accessible locations around Cape Cod, MA before southward migration. We quantified hatch-year tern weekly residency, weekly recruitment rate into the staging population, and derived weekly staging population growth rate during two post-breeding, pre-migratory staging seasons (2014 and 2015) at Cape Cod National Seashore. We also estimated hatch-year tern staging duration at Cape Cod staging grounds. Tern residency probability at Cape Cod National Seashore during 2014 and 2015 was nearly 1 during the first weeks of the season and decreased steadily over the last four weeks to ~0.5 in the final week of the study. Recruitment rates into the staging population, representing the weekly per capita increase in hatch-year terns during the staging season, indicated that most terns arrived on the staging grounds during the first weeks of the staging season (16 July–19 August). We also identified differences in staging duration between birds from the two breeding regions. Hatch-year terns from the southernmost region spent less time staging at Cape Cod National Seashore than their northern counterparts in both 2014 and 2015. These differences may indicate alternative staging strategies for individuals originating in different regions and possibly reveal differences in conditions between these areas; for example, in the availability of ephemeral prey fish.

Massachusetts↗

USGS2021

Least Bell's Vireos and Southwestern Willow Flycatchers at the San Luis Rey flood risk management project area in San Diego County, California—Breeding activities and habitat use—2020 annual report

Executive Summary Surveys and monitoring for the endangered Least Bell’s Vireo ( Vireo bellii pusillus ; vireo) were done at the San Luis Rey Flood Risk Management Project Area (Project Area) in the city of Oceanside, San Diego County, California, between March 31 and July 20, 2020. We completed four protocol surveys during the breeding season, supplemented by weekly territory monitoring visits. We identified a total of 161 territorial male vireos; 145 were confirmed as paired and 4 were confirmed as single males. For the remaining 12 territories, we were unable to confirm pair status. Three transient vireos were detected in 2020. The vireo population in the Project Area increased by 26 percent from 2019 to 2020. Vireo populations increased across San Diego County, with a 39-percent increase documented at Marine Corps Base Camp Pendleton (MCBCP); a 58-percent increase at Marine Corps Air Station; a 78-percent increase on the Otay River; and a 7-percent increase in the population on the middle San Luis Rey River. We used an index of treatment (Treatment Index) to evaluate the impact of on-going vegetation clearing on the Project Area vireo population. The Treatment Index measures the cumulative effect of vegetation treatment within a territory (since 2005) by using the percent area treated weighted by the number of years since treatment. We found that the Treatment Index for unoccupied habitat was more than five times that of occupied habitat, indicating that vireos selected less disturbed habitat in which to settle. We monitored vireo nests at three general site types: (1) within the flood channel where exotic and native vegetation removal has occurred regularly (Channel), (2) three sites next to the flood channel where limited exotic and native vegetation removal has occurred (Off-channel), and (3) three sites that have been actively restored by planting native vegetation (Restoration). Nesting activity was monitored in 100 territories, 4 of which were occupied by single males. Hatching success was higher in the Channel relative to the Off-channel. We found no other differences between Channel, Off-channel, and Restoration nests in terms of clutch size or fledging success. There also was no difference in measures of productivity per pair between Channel, Off-channel, Restoration, and Mixed territories (territories that were classified as one site type but nesting occurred in another site type, or where multiple site types were used for nesting). Overall, breeding success and productivity were lower in 2020 than in 2019, with 69 percent of pairs fledgling at least one young and pairs fledging an average of 2.1±1.7 young. To investigate whether the cumulative years of treatment had an impact on vireo reproductive effort, we looked at the effects of the Treatment Index on reproductive parameters. Results from generalized linear models indicated that treatment did not have an effect on vireo nesting effort or the number of vireo fledglings per pair produced in 2020. Similarly, our analysis of nest survival for 2020 revealed no effect of Treatment Index on daily survival rate. Analysis of vegetation data collected at vireo nests from 2006 to 2020 revealed that vegetation at 1–2 meters (m) from the ground was the most important predictor of daily survival rate. There were differences in nest-placement characteristics among site types and successful/unsuccessful nests. Channel nests were placed higher in the vegetation than Off-channel or Restoration nests. Host plant height, distance to edge of host plant, and distance to edge of vegetation clump were greater at Channel sites compared with Off-channel sites, but were not different from Restoration sites. Within sites, we found only one difference between successful and unsuccessful nests. At Off-channel sites, successful nests were placed higher in the vegetation than unsuccessful nests. Red/arroyo willow ( Salix laevigata or Salix lasiolepis ) and mule fat ( Baccharis salicifolia ) were the species most commonly selected for nesting by vireos in all 3 site types. Vireos used a wider variety of species for nesting in Channel and Off-channel sites (7 and 10 species, respectively) compared to Restoration sites (3 species). Ninety-three vireos banded before the 2020 breeding season were resighted and identified at the Project Area in 2020, all of which were originally banded at the Project Area. Adult birds of known age ranged from 1 to 9 years old. A total of 171 vireos were newly banded in 2020. Twenty-eight adult vireos were banded with a unique color combination, and 143 nestlings were banded with a single dark blue numbered federal band on the left leg. Between 2006 and 2020, survivorship of males (67±10 percent) was consistently higher than females (59±11 percent). First-year birds from 2006 to 2020 had an average over-winter survivorship of 17±5 percent. First-year dispersal in 2020 averaged 2.9±2.9 kilometers (km), with the longest dispersal (13.5 km) by a female that was recaptured at Las Flores Creek, MCBCP. From 2007 to 2012, most returning first-year vireos returned to the Project Area, whereas from 2013 to 2017, the majority of returning birds dispersed to areas outside of the Project Area. In 2018, the trend shifted, and most first-year vireos returned to the Project area. This trend continued in 2020 with most first-year vireos returning to the Project Area; 77 percent of all re-encountered first-year birds returned to the Project Area and 23 percent dispersed to areas outside of the Project Area (upstream to the middle San Luis Rey River and to drainages on MCBCP). Most of the returning adult male vireos showed strong between-year site fidelity to their previous territories. Eighty percent of males (45/56) occupied a territory in 2020 that they had defended in 2019 (within 100 m). Thirty-three percent of females (2/6) detected in 2020 returned to a territory that they occupied in 2019. The average between-year movement for returning adult vireos was 0.1±0.5 km. We completed four protocol surveys for the endangered Southwestern Willow Fycatcher ( Empidonax traillii extimus ; flycatcher) at the Project Area between May 20 and July 20, 2020. No Willow Flycatchers were detected in the Project Area in 2020. A total of 46 vegetation transects (526 points) were sampled at the San Luis Rey Flood Risk Management Project Area in 2020. Seventy-one percent (376/526) of points were in the Channel and 22 percent (115/526) were at Upper Pond. The remaining 7 percent (35/526) were at the Whelan Restoration site. Foliage cover below 1 m was higher at the Channel points compared to Upper Pond and Whelan Restoration. Higher foliage cover in the Channel was attributed to the higher herbaceous component. However, foliage cover from 1 to 3 m was higher at the Whelan Restoration site compared to both Upper Pond and the Channel. Average canopy height was similar at all three site types and was 4.4 m or less. From 2006 to 2020, total foliage cover declined above 1 m in the Channel, from 4 to 5 m at Upper Pond, and above 8 m at Whelan Restoration. Within the Channel, the steepest declines occurred between 2009 and 2013 and between 2014 and 2016. Since 2016, we observed an increase in percent foliage between 0 and 2 m within the Channel, but for other height classes, percent cover remained below levels detected before 2009. Changes in cover at Upper Pond and Whelan Restoration appeared to be driven by the loss of tall tree cover. The vegetation mowing and treatment activities, in combination with lack of precipitation (especially between 2012 and 2016), may have contributed to the decline in foliage cover observed from 2006 to 2020. We sampled vegetation at 49 vireo nests and 49 random plots (“territory” plots) within territories in the Channel and Upper Pond following the 2020 breeding season. Vireos in the Channel selected territories with significantly more foliage cover above 2 m but less cover below 1 m relative to the available habitat. In contrast, Channel vireos selected nest sites within their territories with lower foliage cover above 3 m and were non-selective with regard to cover below 2 m. Vireos at Upper Pond generally were less selective with regard to territory and nest sites but tended to select territories with more foliage cover from 1 to 2 m and above 8 m, and they selected nest sites within their territories with greater foliage cover from 0 to 1 m.

California↗

USGS2022

Vegetative buffer strips show limited effectiveness for reducing antibiotic transport in surface runoff

Vegetative buffer strips (VBS) have been demonstrated to effectively reduce loads of sediment, nutrients, and herbicides in surface runoff, but their effectiveness for reducing veterinary antibiotic (VA) loads in runoff has not been well documented. The objective of this study was to determine the effectiveness of VBS vegetation and width on surface runoff loads of the VAs sulfamethazine (SMZ) and lincomycin (LIN). Experimental design of the plots (1.5 × 25 m) was a two-way factorial with four vegetation treatments (tall fescue [ Festuca aruninacea Schreb.]; tall fescue with switchgrass [ Panicum virgatum L.] hedge; warm-season native grass mix; and continuous fallow control), and four buffer widths (0, 2, 5, and 9 m). Turkey litter spiked with SMZ and LIN was applied to the source area (upper 7 m) of each plot, and runoff was collected at each width. Runoff was generated with a rotating boom simulator. Results showed VA loads in runoff at the 0-m sampler ranged from 3.8 to 5.9% of applied, and overall VA transport in runoff was predominately in the dissolved phase (90% for SMZ and 99% for LIN). Among vegetation treatments, only tall fescue significantly reduced loads of SMZ and LIN compared with the control, with load reductions of ∼30% for both VAs. Estimated field-scale reductions in VA loads showed that source-to-buffer area ratios (SBARs) of 10:1 to 20:1 reduced VA loads by only 7 to 16%. Overall, the grass VBS tested here were less effective at reducing SMZ and LIN loads in surface runoff than has been previously demonstrated for sediment, nutrients, and herbicides.

Journal of Environmental Quality↗

USGS2000

Colorado River sediment transport: 1. Natural sediment supply limitation and the influence of Glen Canyon Dam

Analyses of flow, sediment‐transport, bed‐topographic, and sedimentologic data suggest that before the closure of Glen Canyon Dam in 1963, the Colorado River in Marble and Grand Canyons was annually supply‐limited with respect to fine sediment (i.e., sand and finer material). Furthermore, these analyses suggest that the predam river in Glen Canyon was not supply‐limited to the same degree and that the degree of annual supply limitation increased near the head of Marble Canyon. The predam Colorado River in Grand Canyon displays evidence of four effects of supply limitation: (1) seasonal hysteresis in sediment concentration, (2) seasonal hysteresis in sediment grain size coupled to the seasonal hysteresis in sediment concentration, (3) production of inversely graded flood deposits, and (4∥ development or modification of a lag between the time of a flood peak and the time of either maximum or minimum (depending on reach geometry) bed elevation. Analyses of sediment budgets provide additional support for the interpretation that the predam river was annually supply‐limited with respect to fine sediment, but it was not supply‐limited with respect to fine sediment during all seasons. In the average predam year, sand would accumulate and be stored in Marble Canyon and upper Grand Canyon for 9 months of the year (from July through March) when flows were dominantly below 200–300 m 3 /s; this stored sand was then eroded during April through June when flows were typically higher. After closure of Glen Canyon Dam, because of the large magnitudes of the uncertainties in the sediment budget, no season of substantial sand accumulation is evident. Because most flows in the postdam river exceed 200–300 m 3 /s, substantial sand accumulation in the postdam river is unlikely.

Colorado River, Glen Canyon Dam↗

USGS2020

Behavior at short temporal scales drives dispersal dynamics and survival in a metapopulation of brook trout (Salvelinus fontinalis)

1) Movement has been studied extensively in stream salmonids, and most data suggest that population-level behavior is best described by a leptokurtic distribution. This distribution emphasizes the large proportion of sedentary individuals in a population, which can implicitly lead to assumptions of low population connectivity and overlook the ecological significance of rare individuals with more mobile phenotypes. 2) We report findings of a multi-season radio telemetry study conducted on four adjacent populations of wild brook trout ( Salvelinus fontinalis ) connected by Loyalsock Creek in northcentral Pennsylvania. We used these data to investigate temporal and spatial patterns in movement and fitness tradeoffs associated with behavioral phenotype. 3) Similar to previous studies, we found that 59 of the 120 radio-tagged individuals (49%) were sedentary and moved less than 200 m. Only 18% of individuals dispersed more than 1 km, but the maximum distanced moved exceeded 13 km. We also found that mobile individuals had significantly higher summer and fall survival than did sedentary fish, which could indicate that there are fitness benefits associated with vagility. 4) Most long-distance movements were the result of fish migrating from small tributaries into a larger mainstem river in the days after spawning. Therefore, even though mobility was only expressed for a short duration and by relatively few individuals in the population, the behavior appears to maintain metapopulation connectivity throughout the watershed. 5) Our study highlights the ecological significance of rare phenotypes for population demography across large spatial scales and the need to understand movement across multiple temporal and spatial scales to ensure adequate conservation of critical forms of cryptic life history diversity.

Pennsylvania↗

USGS2016

Physical, chemical, and biological characteristics of selected headwater streams along the Allegheny Front, Blair County, Pennsylvania, July 2011–September 2013

The Altoona Water Authority (AWA) obtains all of its water supply from headwater streams that drain western Blair County, an area underlain in part by black shale of the Marcellus Formation. Development of the shale-gas reservoirs will require new access roads, stream crossing, drill-pad construction, and pipeline installation, activities that have the potential to alter existing stream channel morphology, increase runoff and sediment supply, alter streamwater chemistry, and affect aquatic habitat. The U.S. Geological Survey, in cooperation with Altoona Water Authority and Blair County Conservation District, investigated the water quality of 12 headwater streams and biotic health of 10 headwater streams. Channel morphology was characterized at 10 of 12 stream sites using 500-foot (minimum) longitudinal profiles, four cross-sections each, and pebble counts. Channel slopes ranged from 0.008 in Poplar Run near Newry to 0.045 in Mill Run. In general, streams draining watersheds of 5 square miles or less and at higher elevation had the steepest slopes. On the basis of the median particle size, determined during pebble counts, the streambed substrate can be characterized as cobble (Mill Run, Bells Gap Run, Tipton Run, and Sink Run), a mix of gravel and cobble (South Poplar Run, Dry Gap Run, Glenwhite Run, Sugar Run, Blair Gap Run), and gravel (Poplar Run, Newry). Daily mean values of gage height were determined, and continuous (30-minute interval) data consisting of specific conductance and water temperature were collected, at four sites; each site showed typical seasonal fluctuations and the effects of precipitation. Streamflow affected discrete water-quality. Dissolved oxygen always increased with increased streamflow. Most cations (including barium and strontium), along with pH, specific conductance, and total dissolved solids, decreased with greater streamflow, reflecting the dilution effect of moderately acidic surface runoff and precipitation on groundwater discharge (base flow) into the stream channels. Concentrations of trace elements varied by constituent and streamflow. On the basis of the results of water-quality analyses for the selected constituents, the water quality in 9 of the 12 streams can be considered fair or attaining with no measured constituent exceeding a U.S. Environmental Protection Agency maximum or secondary contaminant level. Abandoned mine drainage (AMD) affects Glenwhite Run, Blair Gap Run, and Sugar Run. For Sugar Run, the AMD is reflected in the elevated iron concentration (greater than 300 micrograms per liter). Manganese concentrations greater than 50 micrograms per liter were measured in Glenwhite Run, Sugar Run, and Blair Gap Run. A mixing curve based upon chloride/bromide ratios for two end points—precipitation and deicing salts—indicate that deicing salt is migrating to the streams. A similar curve representative of late-emerging flowback water from Marcellus gas wells indicated that the surface-water samples had not been influenced by such brines. On the basis of the concentration of major ions, the streams in the study area generally had mixed cation and anion compositions. Calcium is the dominant cation in one stream. Carbonate and bicarbonate are the dominant anions for two streams, and sulfate is dominant in three streams. The remaining six streams do not have a dominant ion. Biotic health was characterized at 10 of 12 stream sites; the two sites excluded were established late in the study period (May 2013) for refinement of water quality in the headwaters of Poplar Run and the location of Marcellus Formation gas wells. On the basis of the Maryland Index of Biotic Integrity (MdIBI) for fish assemblages, 8 of 10 streams can be considered in fair health. Tipton Run had the highest MdIBI score (3.75) and the greatest number of native species. South Poplar Run had the lowest MdIBI score (1.75); pollution tolerant blacknose dace was dominant. On the basis of the Pennsylvania Department of Environmental Protection macroinvertebrate index of biotic integrity, 9 of 10 streams were characterized as attaining, with scores as high as 88.9 at Tipton Run. Only Sugar Run was characterized as impaired, with a score of 40.4.

Pennsylvania↗

USGS2022

Least Bell's Vireos and Southwestern Willow Flycatchers at the San Luis Rey flood risk management project area in San Diego County, California: Breeding activities and habitat use—2021 Annual report

California↗

USGS2012

Water resources of the Iroquois National Wildlife Refuge, Genesee and Orleans counties, New York 2008-2010

A 2-year study of the water resources of the Iroquois National Wildlife Refuge (Refuge) in western New York was carried out in 2009-2010 in cooperation with the U.S. Fish and Wildlife Service to assist the Refuge in the development of a 15-year Comprehensive Conservtion plan. The study focused on Oak Orchard Creek, which flows through the Refuge, the groundwater resources that underlie the Refuge, and the possible changes to these resources related to the potential development of a bedrock quarry along the northern side of the Refuge. Oak Orchard Creek was monitored seasonally for flow and water quality; four tributary streams, which flowed only during early spring, also were monitored. A continuous streamgage was operated on Oak Orchard Creek, just north of the Refuge at Harrison Road. Four bedrock wells were drilled within the Refuge to determine the type and thickness of unconsolidated glacial sediments and to characterize the thickness and type of bedrock units beneath the Refuge, primarily the Lockport Dolomite. Water levels were monitored in 17 wells within and adjacent to the Refuge and water-quality samples were collected from 11 wells and 6 springs and analyzed for physical properties, nutrients, major ions, and trace metals. Flow in Oak Orchard Creek is from two different sources. During spring runoff, flow from the Onondaga Limestone Escarpment, several miles south of the Refuge, supplements surface-water runoff and groundwater discharge from the Salina Group to the south and east of the Refuge. Flow to Oak Orchard Creek also comes from surface-water runoff from the Lockport Dolomite Escarpment, north of the Refuge, and from groundwater discharging from the Lockport Dolomite and unconsolidated deposits that overlie the Lockport Dolomite. During the summer and fall low-flow period, only small quantities of groundwater flow from the Salina shales and Lockport Dolomite bedrock and the unconsolidated sediments that overlie them; most of this flow is lost to wetland evapotranspiration, and the remainder enters Oak Orchard Creek. Water quality in the Oak Orchard Creek is affected not only by these groundwater sources but also by surface runoff from agricultural areas and the New York State Wildlife Management Area east of the Refuge. Based on the results of the drilling program, the Lockport Dolomite underlies nearly all the Refuge. The Refuge wetlands lie within a bedrock trough between the Lockport Dolomite and Onondaga Limestone Escarpments, to the north and south, respectively. This bedrock trough was filled with mostly fine-grained sediments when Glacial Lake Tonawanda was present following the last period of glaciation. These fine-grained sediments became the substrate on which the wetlands were formed along Oak Orchard Creek and nearby Tonawanda Creek, to the south and west. Water quality in the unconsolidated and bedrock aquifers is variable; poor quality water (sulfide-rich "black water") generally is present south of Oak Orchard Creek and better quality water to the north where the Lockport Dolomite is close to the land surface. A set of springs, the Oak Orchard Acid Springs, is present within the Refuge; the springs are considered unique in New York State because of their naturally low pH (approximately 2.0) and their continual discharge of natural gas. The potential development of a bedrock quarry in the Lockport Dolomite bedrock along the northern border of the Refuge may affect the nearby Refuge wetlands. The extent of drawdown needed to actively quarry the bedrock could change the local hydrology and affect groundwater-flow directions and rates, primarily in the Lockport Dolomite bedrock and possibly the Oak Orchard Acid Springs area, farther to the south. The effect on the volume of flow in Oak Orchard Creek would probably be minimal as a result of the poor interaction between the surface-water and the groundwater systems. Of greater potential effect will be the possible change in the quality of water flowing into the Refuge from the discharge of groundwater during dewatering operations at the quarry; this discharge will flow into the northern part of the Refuge and affect the quantity and quality of wetland areas downstream from the quarry discharge. These changes may affect wetland management activities because of the potential for poorquality water to affect the ecology of the wetlands and the wildlife that use these wetlands.

New York↗

USGS2004

Microbiological Water Quality in Relation to Water-Contact Recreation, Cuyahoga River, Cuyahoga Valley National Park, Ohio, 2000 and 2002

The microbiological water quality of a 23-mile segment of the Cuyahoga River within the Cuyahoga Valley National Park was examined in this study. This segment of the river receives discharges of contaminated water from stormwater, combined-sewer overflows, and incompletely disinfected wastewater. Frequent exceedances of Ohio microbiological water-quality standards result in a health risk to the public who use the river for water-contact recreation. Water samples were collected during the recreational season of May through October at four sites on the Cuyahoga River in 2000, at three sites on the river in 2002, and from the effluent of the Akron Water Pollution Control Station (WPCS) both years. The samples were collected over a similar range in streamflow in 2000 and 2002. Samples were analyzed for physical and chemical constituents, as well as the following microbiological indicators and pathogenic organisms: Escherichia coli (E. coli), Salmonella, F-specific and somatic coliphage, enterovirus, infectious enterovirus, hepatitis A virus, Clostridium perfringens (C. perfringens), Cryptosporidium, and Giardia. The relations of the microorganisms to each other and to selected water-quality measures were examined. All microorganisms analyzed for, except Cryptosporidium, were detected at least once at each sampling site. Concentrations of E. coli exceeded the Ohio primary-contact recreational standard (298 colonies per 100 milliliters) in approximately 87 percent of the river samples and generally were higher in the river samples than in the effluent samples. C. perfringens concentrations were positively and significantly correlated with E. coli concentrations in the river samples and generally were higher in the effluent samples than in the river samples. Several of the river samples that met the Ohio E. coli secondary-contact recreational standard (576 colonies per 100 milliliters) had detections of enterovirus, infectious enterovirus, hepatitis A virus, and Salmonella, indicating that there are still risks even when the E. coli standard is not exceeded. River samples in which the secondary-contact recreational standard for E. coli was exceeded showed a higher percentage of the co-occurrence of pathogenic organisms than samples that met the standard. This indicates that in this study area, E. coli is a useful indicator of human health risk. Detections of hepatitis A virus tended to be associated with higher median concentrations of somatic coliphage, F-specific coliphage, and infectious enterovirus. In addition, geometric mean C. perfringens concentrations tended to be higher in samples where hepatitis A virus was present than in samples where hepatitis A virus was absent. Hepatitis A virus was not detected in samples collected upstream from the Akron WPCS; all downstream detections had coincident detections in the Akron WPCS effluent, suggesting that Akron WPCS was a principal source of hepatitis A virus at the downstream sites. Geometric mean concentrations of E. coli were calculated on the basis of analytical results from at least five samples collected at each river site during May, July, and September of 2000. In each case, the Ohio geometric-mean primary-contact recreational standard of 126 col/100 mL was exceeded. E. coli concentrations were significantly correlated with streamflow and increased with streamflow at sites upstream and downstream from the Akron WPCS. This indicates that E. coli loads from sources upstream from the Akron WPCS have the potential to appreciably influence the frequency of attainment of recreational water-quality standards at downstream locations.

Water-Resources Investigations Report↗

USGS1980

An assessment of Landsat data acquisition history on identification and area estimation of corn and soybeans

During the past decade, numerous studies have demonstrated the potential of satellite remote sensing for providing accurate and timely crop area information. This study assessed the impact of Landsat data acquisition history on classification and area estimation accuracy of corn and soybeans. Multitemporally registered Landsat MSS data from four acquisitions during the 1978 growing season were used in classification of eight sample segments in the U.S. Corn Belt. The results illustrate the importance of selecting Landsat acquisitions based on spectral differences in crops at certain growth stages.

Technical Report↗

USGS2010

Invertebrate mercury bioaccumulation in permanent, seasonal, and flooded rice wetlands within California's Central Valley

We examined methylmercury (MeHg) bioavailability in four of the most predominant wetland habitats in California's Central Valley agricultural region during the spring and summer: white rice, wild rice, permanent wetlands, and shallowly-flooded fallow fields. We sampled MeHg and total mercury (THg) concentrations in two aquatic macroinvertebrate taxa at the inlets, centers, and outlets of four replicated wetland habitats (8 wetlands total) during two time periods bounding the rice growing season and corresponding to flood-up and pre-harvest (96 total samples). In general, THg concentrations (mean ± standard error) in Notonectidae ( Notonecta , back swimmers; 1.18 ± 0.08 µg g − 1 dry weight [dw]) were higher than in Corixidae ( Corisella , water boatmen; 0.89 ± 0.06 µg g − 1 dw, MeHg: 0.74 ± 0.05 µg g − 1 dw). MeHg concentrations were correlated with THg concentrations in Corixidae ( R 2 = 0.80) and 88% of THg was in the MeHg form. Wetland habitat type had an important influence on THg concentrations in aquatic invertebrates, but this effect depended on the sampling time period and taxa. In particular, THg concentrations in Notonectidae, but not Corixidae, were higher in permanent wetlands than in white rice, wild rice, or shallowly-flooded fallow fields. THg concentrations in Notonectidae were higher at the end of the rice growing season than near the time of flood-up, whereas THg concentrations in Corixidae did not differ between time periods. The effect of wetland habitat type was more prevalent near the end of the rice growing season, when Notonectidae THg concentrations were highest in permanent wetlands. Additionally, invertebrate THg concentrations were higher at water outlets than at inlets of wetlands. Our results indicate that although invertebrate THg concentrations increased from the time of flood-up to draw-down of wetlands, temporarily flooded habitats such as white rice, wild rice, and shallowly-flooded fallow fields did not have higher THg or MeHg concentrations in invertebrates than permanent wetlands.

California↗

USGS1986

Cluster analysis of phytoplankton data collected from the National Stream Quality Accounting Network in the Tennessee River basin, 1974-81

A computer program, Numerical Taxonomy System of Multivariate Statistical Programs (NTSYS), was used with interfacing software to perform cluster analyses of phytoplankton data stored in the biological files of the U.S. Geological Survey. The NTSYS software performs various types of statistical analyses and is capable of handling a large matrix of data. Cluster analyses were done on phytoplankton data collected from 1974 to 1981 at four national Stream Quality Accounting Network stations in the Tennessee River basin. Analysis of the changes in clusters of phytoplankton genera indicated possible changes in the water quality of the French Broad River near Knoxville, Tennessee. At this station, the most common diatom groups indicated a shift in dominant forms with some of the less common diatoms being replaced by green and blue-green algae. There was a reduction in genera variability between 1974-77 and 1979-81 sampling periods. Statistical analysis of chloride and dissolved solids confirmed that concentrations of these substances were smaller in 1974-77 than in 1979-81. At Pickwick Landing Dam, the furthest downstream station used in the study, there was an increase in the number of genera of ' rare ' organisms with time. The appearance of two groups of green and blue-green algae indicated that an increase in temperature or nutrient concentrations occurred from 1974 to 1981, but this could not be confirmed using available water quality data. Associations of genera forming the phytoplankton communities at three stations on the Tennessee River were found to be seasonal. Nodal analysis of combined data from all four stations used in the study did not identify any seasonal or temporal patterns during 1974-81. Cluster analysis using the NYSYS programs was effective in reducing the large phytoplankton data set to a manageable size and provided considerable insight into the structure of phytoplankton communities in the Tennessee River basin. Problems encountered using cluster analysis were the subjectivity introduced in the definition of meaningful clusters, and the lack of taxonomic identification to the species level. (Author 's abstract)

Tennessee↗

USGS2026

Captivity may broadly impede bison ecological function: Space, season, and management

American bison ( Bos bison ) were spared from numerical extinction but considered to be ecologically extinct, partially due to spatial restrictions in their former range. A key component of the ecological function of bison is their ability to adjust their spatial behaviors at multiple scales to match the seasonal distributions and availability of resources. To understand how management influences the amount and seasonality of space bison use at various scales, we estimated home range using autocorrelated kernel density estimators (95% utilization distribution) and foraging patch size by the maximum variance in first-passage time at four temporal scales (annual, growing, nongrowing, and focal seasons) for two free-ranging and three captive bison herds. The seasonal differences in space-use within management regimes and study areas were treated as nonparametric related measures while differences amongst management regimes and study areas were treated as nonparametric independent measures. Seasonal variations in space-use were detected in both management regimes, but only free-range bison depicted this pattern at the larger home range scale (p < 0.001). Free-range bison had significantly larger home ranges across seasons compared to captive bison (p < 0.001), but captive bison had larger foraging patch sizes during the growing season than free-range bison. Study areas with captive bison did not differ in their amount of space-use at any scale or season (p > 0.05). The strongest differences were apparent among study herds in annual home range size (p < 0.001) and growing season foraging patch size (p < 0.001). Our results demonstrate that captivity likely prevents bison from using their available landscape seasonally at broad scales, which could have ecological consequences for this historically nomadic herbivore. Although sociopolitical realities prevent bison restoration at a continental scale, increasing the amount of space available to bison where possible has the potential to replicate previous ecological processes. Further research can evaluate the influence of local environmental conditions on seasonality of bison space-use and can assess effects of scale on the ecological impacts of bison.

Colorado, Montana, Texas, Utah↗

USGS2022

Rainforest carnivore ecology in a managed forest reserve: Differential seasonal correlates between habitat components and relative abundance

Studies of relationships between seasons and Neotropical carnivore distributions tend to focus on water and prey availability without considering other habitat components such as escape, foraging, and resting cover. Our goal was to evaluate habitat characteristics that may be important for predicting the seasonal (dry or rainy) relative abundance of four commonly captured Neotropical carnivores (i.e., jaguar [ Panthera onca ], puma [ Puma concolor ], ocelot [ Leopardus pardalis ], and grey fox [ Urocyon cinereoargenteus ]) in Chiquibul Forest Reserve in Belize, Central America. We used trail camera data and random-effect Poisson models to investigate how prey ratios (number of prey detections/total detections), cover (e.g., logs and stumps used for hiding cover from predators), vegetation structure, and environmental site characteristics (e.g., site harvest-history, slope, aspect) were related to carnivore relative abundance. Both prey ratios and vegetation structure appeared in supported models more frequently than other environmental site characteristics and were negatively correlated with carnivore relative abundance. Supported models differed for each season for all species except jaguars for which mammalian prey ratios and prey cover at sites was always negatively correlated with jaguar relative abundance. Carnivores appeared to avoid sites where vegetation created ideal escape and hiding cover for prey even though prey may be less abundant. Our data suggest that vegetation structure and composition can create conditions conducive to carnivore foraging and that these characteristics can differ by season in the tropics.

Biological Conservation↗

USGS2001

Groundwater residence times in Shenandoah National Park, Blue Ridge Mountains, Virginia, USA: A multi-tracer approach

Chemical and isotopic properties of water discharging from springs and wells in Shenandoah National Park (SNP), near the crest of the Blue Ridge Mountains, VA, USA were monitored to obtain information on groundwater residence times. Investigated time scales included seasonal (wet season, April, 1996; dry season, August–September, 1997), monthly (March through September, 1999) and hourly (30-min interval recording of specific conductance and temperature, March, 1999 through February, 2000). Multiple environmental tracers, including tritium/helium-3 ( 3 H/ 3 He), chlorofluorocarbons (CFCs), sulfur hexafluoride (SF 6 ), sulfur-35 ( 35 S), and stable isotopes ( δ 18 O and δ 2 H) of water, were used to estimate the residence times of shallow groundwater discharging from 34 springs and 15 wells. The most reliable ages of water from springs appear to be based on SF 6 and 3 H/ 3 He, with most ages in the range of 0–3 years. This range is consistent with apparent ages estimated from concentrations of CFCs; however, CFC-based ages have large uncertainties owing to the post-1995 leveling-off of the CFC atmospheric growth curves. Somewhat higher apparent ages are indicated by 35 S (>1.5 years) and seasonal variation of δ 18 O (mean residence time of 5 years) for spring discharge. The higher ages indicated by the 35 S and δ 18 O data reflect travel times through the unsaturated zone and, in the case of 35 S, possible sorption and exchange of S with soils or biomass. In springs sampled in April, 1996, apparent ages derived from the 3 H/ 3 He data (median age of 0.2 years) are lower than those obtained from SF 6 (median age of 4.3 years), and in contrast to median ages from 3 H/ 3 He (0.3 years) and SF 6 (0.7 years) obtained during the late summer dry season of 1997. Monthly samples from 1999 at four springs in SNP had SF 6 apparent ages of only 1.2 to 2.5±0.8 years, and were consistent with the 1997 SF 6 data. Water from springs has low excess air (0–1 cm 3 kg −1 ) and N 2 –Ar temperatures that vary seasonally. Concentrations of He and Ne in excess of solubility equilibrium indicate that the dissolved gases are not fractionated. The seasonal variations in N 2 –Ar temperatures suggest shallow, seasonal recharge, and the excess He and Ne data suggest waters mostly confined to gas exchange in the shallow, mountain-slope, water-table spring systems. Water from wells in the fractured rock contains up to 8 cm 3 kg −1 of excess air with ages in the range of 0–25 years. Transient responses in specific conductance and temperature were observed in spring discharge within several hours of large precipitation events in September, 1999; both parameters increased initially, then decreased to values below pre-storm base-flow values. The groundwater residence times indicate that flushing rates of mobile atmospheric constituents through groundwater to streams draining the higher elevations in SNP average less than 3 years in base-flow conditions.

Virginia↗

USGS2022

CO2 uptake offsets other greenhouse gas emissions from salt marshes with chronic nitrogen loading

Coastal wetlands are known for exceptional productivity, but they also receive intense land-based nitrogen (N) loading. In Narragansett Bay, RI (USA), coastal ecosystems have received anthropogenic N inputs from wastewater for more than two centuries. Greenhouse gas fluxes were studied throughout a growing season (2016) in three coastal wetlands with contrasting histories of nitrogen loading. The wetland with the highest historic N load (Mary’s Creek, Warwick, RI) had significantly greater nitrous oxide (N 2 O) and methane (CH 4 ) emissions than the other two sites. However, the two marshes with historic N loads (Mary’s Creek and Mary Donovan, Little Compton, RI) also had greater rates of CO 2 uptake than the reference site (Nag Marsh, Prudence Island, RI). Their CO 2 uptake rates far outpaced their other greenhouse gas emissions. Mary’s Creek had the greatest above- and below-ground plant biomass, vertical accretion rates, and carbon content of soils. Spartina alterniflora height was greatest at Mary’s Creek and Mary Donovan marsh. The following growing season (2017), greenhouse gases were compared across four plant-defined ecological zones in Mary’s Creek. Higher rates of CO 2 uptake and CH 4 emissions were found in the S. alterniflora -vegetated creekbank compared to high marsh zones or bare mudflats. Potential denitrifying enzyme activity did not significantly differ across the four zones nor between Mary’s Creek and Nag Marsh, suggesting a consistently high capacity to completely reduce N loads. These results support efforts to protect and restore these coastal ecosystems for their carbon sequestration function even despite prevalence of anthropogenic N loading.

Rhode Island↗