USGS Science⌕ Search

SEARCH · USGS Science

Results for “Cells”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 181 records · Page 10Linked to original sources

Diamond-anvil cell observations of a new methane hydrate phase in the 100-MPa pressure range

A new high-pressure phase of methane hydrate has been identified based on its high optical relief, distinct pressure-temperature phase relations, and Raman spectra. In-situ optical observations were made in a hydrothermal diamond-anvil cell at temperatures between -40?? and 60 ??C and at pressures up to 900 MPa. Two new invariant points were located at -8.7 ??C and 99 MPa for the assemblage consisting of the new phase, structure I methane hydrate, ice Ih, and water, and at 35.3 ??C and 137 MPa for the new phase-structure I methane hydrate-water-methane vapor. Existence of the new phase is critical for understanding the phase relations among the hydrates at low to moderate pressures, and may also have important implications for understanding the hydrogen bonding in H2O and the behavior of water in the planetary bodies, such as Europa, of the outer solar system.

Journal of Physical Chemistry A↗

Simultaneous determination of Cr(iii) and Cr(vi) using reversed-phased ion-pairing liquid chromatography with dynamic reaction cell inductively coupled plasma mass spectrometry

A method for the simultaneous determination of Cr(iii) and Cr(vi) species in waters, soil leachates and synthetic bio-fluids is described. The method uses reversed-phase ion-pairing liquid chromatography to separate the chromium species and a dynamic reaction cell (DRC??) equipped ICP-MS for detection of chromium. Separation of the chromium species is carried out in less than 2 min. Cr(iii) is complexed with ethylenediaminetetraacetic acid (EDTA) prior to separation by mixing samples with the mobile phase containing 2.0 mM tetrabutylammonium hydroxide (TBAOH), 0.5 mM EDTA (dipotassium salt), and 5% (vol/vol) methanol, adjusted to pH 7.6. The interfering 40Ar 12C+ background peak at mass 52 was reduced by over four orders of magnitude to less than 200 cps by using 0.65 mL min-1 ammonia as a reaction gas and an RPq setting on the DRC of 0.75. Method detection limits (MDLs) of 0.09 ??g L-1 for Cr(iii) and 0.06 ??g L-1 for Cr(vi) were obtained based on peak areas at mass 52 for 50 ??L injections of low level spikes. Reproducibility at 2 ??g L-1 was 3% RSD for 5 replicate injections. The tolerance of the method to various levels of common cations and anions found in natural waters and to matrix constituents found in soil leachates and simulated gastric and lung fluids was tested by performing spike recovery calculations for a variety of samples. ?? The Royal Society of Chemistry.

Journal of Analytical Atomic Spectrometry↗

A new diamond anvil cell for hydrothermal studies to 2.5 GPa and from -190 to 1200 °C

A new style of diamond anvil cell(DAC) has been designed and built for conducting research in fluids at pressures to 2.5 GPa and temperatures from −190 to 1200 °C. The new DAC has been used for optical microscope observations and synchrotron x‐ray diffraction studies. Fringes produced by interference of laser light reflected from top and bottom anvil faces and from top and bottom sample faces provide a very sensitive means of monitoring the volume of sample chamber and for observing volume and refractive index changes in samples that have resulted from transitions and reactions. X‐ray diffraction patterns of samples under hydrothermal conditions have been made by the energy dispersive method using synchrotron radiation. The new DAC has individual heaters and individual thermocouples for the upper and lower anvils that can be controlled and can maintain temperatures with an accuracy of ±0.5 °C. Low temperatures are achieved by introducing liquid nitrogen directly into the DAC. The equation of state of H 2 O and the α‐β quartz transition are used to determine pressure with an accuracy of ±1% in the aqueous samples. The new DAC has been used to redetermine five isochores of H 2 O as well as the dehydration curves of brucite, Mg(OH) 2 , and muscovite, KAl 2 (Si 3 Al)O 10 (OH) 2 .

Review of Scientific Instruments↗

Synchrotron x-ray spectroscopy of EuHN O3 aqueous solutions at high temperatures and pressures and Nb-bearing silicate melt phases coexisting with hydrothermal fluids using a modified hydrothermal diamond anvil cell and rail assembly

A modified hydrothermal diamond anvil cell (HDAC) rail assembly has been constructed for making synchrotron x-ray absorption spectroscopy, x-ray fluorescence, and x-ray mapping measurements on fluids or solid phases in contact with hydrothermal fluids up to ???900??C and 700 MPa. The diamond anvils of the HDAC are modified by laser milling grooves or holes, for the reduction of attenuation of incident and fluorescent x rays and sample cavities. The modified HDAC rail assembly has flexibility in design for measurement of light elements at low concentrations or heavy elements at trace levels in the sample and the capability to probe minute individual phases of a multiphase fluid-based system using focused x-ray microbeam. The supporting rail allows for uniform translation of the HDAC, rotation and tilt stages, and a focusing mirror, which is used to illuminate the sample for visual observation using a microscope, relative to the direction of the incident x-ray beam. A structure study of Eu(III) aqua ion behavior in high-temperature aqueous solutions and a study of Nb partitioning and coordination in a silicate melt in contact with a hydrothermal fluid are described as applications utilizing the modified HDAC rail assembly. ?? 2007 American Institute of Physics.

Review of Scientific Instruments↗

Eastern Carpenter Bee (Hymenoptera: Apidae): Nest structure, nest cell provisions, and trap nest acceptance in Rhode Island

Analysis of pollen provisions in Xylocopa virginica (L.) nests in southern Rhode Island showed that this species produced pollen loaves from 21 different genera of plants in 2016, 19 in 2017, and 39 in 2018. Antirrhinium majus L. (garden snapdragon) pollen was the most common type collected in all three years (21.4%). Overall, wind-pollinated tree pollen comprised 22.1% of all pollen loaves. Blueberry pollen was a minor component of pollen loaves (0.1%), despite abundant blueberry plants nearby. Mean values of X. virginica nest measurements (tunnel length 15.4 ± 1.2 cm, width 15.0 ± 0.5 mm, and cell length 17.7 ± 0.3 mm) were similar to those reported in previous studies. Only 2 of the 216 trap nests deployed in 2017 were occupied by 11 X. virginica bees (9 females and 2 males). However, 17 nests contained 230 Osmia taurus Smith, 6 nests contained 73 O. cornifrons (Radoszkowski), and 1 nest contained 8 O. lignaria Say. Thirty-four nests (15.7%) were occupied by 151 grass-carrying wasps, Isodontia sp. and 6 vespid wasps occupied three nests (1.4%) in 2017. In 2018, 4 of 96 trap nests were occupied by carpenter bees. Understanding the nesting and foraging habits of X. virginica will help us to manage natural populations for pollination services.

Rode Island↗

Estrogen receptor 1 expression and methylation of Esr1 promoter in mouse fetal prostate mesenchymal cells induced by gestational exposure to bisphenol A or ethinylestradiol

Fetal/neonatal environmental estrogen exposures alter developmental programing of the prostate gland causing onset of diseases later in life. We have previously shown in vitro that exposures to 17β-estradiol (E2) and the endocrine disrupting chemical bisphenol A, at concentrations relevant to human exposure, cause an elevation of estrogen receptor α ( Esr1 ) mRNA in primary cultures of fetal mouse prostate mesenchymal cells; a similar result was observed in the fetal rat urogenital sinus. Effects of these chemicals on prostate mesenchyme in vivo are not well understood. Here we show effects in mice of fetal exposure to the estrogenic drug in mixed oral contraceptives, 17α-ethinylestradiol (EE2), at a concentration of EE2 encountered by human embryos/fetuses whose mothers become pregnant while on EE2-containing oral contraceptives, or bisphenol A at a concentration relevant to exposures observed in human fetuses in vivo . Expression of Esr1 was elevated by bisphenol A or EE2 exposures, which decreased the global expression of DNA methyltransferase 3A ( Dnmt3a ), while methylation of Esr1 promoter was significantly increased. These results show that exposures to the environmental estrogen bisphenol A and drug EE2 cause transcriptional and epigenetic alterations to expression of estrogen receptors in developing prostate mesenchyme in vivo .

Environmental Epigenetics↗

Observations on the crystallization of spodumene from aqueous solutions in a hydrothermal diamond-anvil cell

Crystallization experiments were conducted in a new type of hydrothermal diamond-anvil cell (HDAC; type V) using LiAlSi 2 O 6 (S) gel and H 2 O (W) as starting materials. A total of 21 experiments were performed at temperatures up to 950°C and pressures up to 788 MPa. In the samples with relatively low W/S ratios, many small crystals formed in the melt phase during cooling. In those with high W/S ratios, only a few crystals with smooth surfaces crystallized from the aqueous fluid in the presence of melt droplets, which were gradually consumed during crystal growth, indicating rapid transfer of material from the melt to the crystals through the aqueous fluid. The nucleation of crystals started at 710 (±70)°C and 520 (±80) MPa, and crystal growth ended at 570 (±40)°C and 320 (±90) MPa, with the cooling P-T path within the stability field of spodumene + quartz in the S-W system. The observed linear crystal growth rates in the aqueous phase, calculated by dividing the maximum length of a single crystal by the duration of the entire growth step, were 4.7 × 10 −6 and 5.7 × 10 −6 cm s −1 for the cooling rates of 0.5 and 1°C min −1 , respectively. However, a rapid crystal growth rate of 3.6 × 10 −5 cm s −1 in the aqueous fluid was observed when the components were supplied by nearby melt droplets. Our results show that when crystals nucleate in the aqueous fluid instead of the melt phase, there are fewer nuclei formed, and they grow much faster due to the low viscosity of the aqueous fluid, which accelerates diffusion of components for the growth of crystals. Therefore, the large crystals in granitic pegmatite can crystallize directly from aqueous fluids rather than hydrosilicate melt.

Geofluids↗

Antigen-binding cells in the peripheral blood of sockeye salmon, Oncorhynchus nerka Walbaum, induced by immersion or intraperitoneal injection of Vibrio languilarum bacterin

We used an immunocytoadherence assay to monitor the response of antigen-binding cells (ABC) in the peripheral blood of sockeye salmon, Oncorhynchus nerka , after immersion in, or intraperitoneal injection of, Vibrio anguillarum LS 1–74 bacterin. Both methods initiated an elevated ABC response in less than one day; this response persisted one week longer in the injected than in the immersed fish.

Journal of Fish Biology↗

Immunostimulation of antibody-producing cells and humoral antibody to fish bacterins by a biological response modifier

Numbers of splenic antibody-producing cells and humoral antibody titres were elevated during immunization regimes in rainbow trout when the bacterins Yersinia ruckeri or Aeromonas salmonicida O-antigen preparations were mixed with the immunostimulator FK-565. Fish sampled 14 days after injection showed a marked increase in the immune response when doses of 5, 10 or 100 μg of antigen were used. The immunostimulator may aid initial antigen uptake and processing.

Journal of Fish Biology↗

Relative effect of two dietary water-soluble analogues of menaquinone on coagulation and packed cell volume of blood of lake trout (Salvelinus namaycush)

Triplicate lots of fingerling lake trout ( Salvelinus namaycush ) (initial mean weight, 5.3 g) were fed a basal, semipurified diet, or this basal diet supplemented with either 1.0 or 2.0 ppm of either menadione sodium bisulfite (MSB) or menadione dimethylpyrimidinol bisulfite (MPB) for 18 wk at 14 C. Neither form of vitamin K had a significant effect on the growth, food conversion, or body composition of the fish.Fish fed 1 ppm of MSB had a significantly higher mean packed cell volume (PCV) than those fed 2 ppm of either analogue. Trout fed 2 ppm of MPB had an intermediate PCV which was not significantly different from that of trout fed either 1 ppm MPB or 2 ppm MSB. A dietary level of 1 ppm MPB (providing an equivalent menaquinone concentration of about 0.5 mg/kg of diet) is sufficient to insure normal coagulation of lake trout blood and a satisfactory PCV.

Journal of the Fisheries Research Board of Canada↗

Plaque-forming cells and humoral antibody in rainbow trout (Salmo gairdneri) induced by immersion in a Yersinia ruckeri O-antigen preparation

Rainbow trout ( Salmo gairdneri ) were exposed to the O-antigen of Yersinia ruckeri by various immunization regimens. The passive hemolytic plaque assay was used to show specific splenic plaque-forming cells (PFC) and passive hemagglutination demonstrated humoral antibody titers in fish injected with or immersed in the antigen preparations. Preceding antigen immersion with a 2-min immersion in either a 5.2 or a 2.6% NaCl solution did not affect the numbers of PFC or levels of antibody. Fish held for 2 min in ethyl m -aminobenzoate methanesulfonate (MS-222 ® ) before antigen immersion showed no significant difference from the control fish. Dosage studies showed that the minimal concentration of antigen for induction of PFC by immersion was 5.0 μg/mL.

Journal of the Fisheries Research Board of Canada↗

Variation in salinity tolerance, gill Na+/K+-ATPase, Na+/K+/2Cl– cotransporter and mitochondria-rich cell distribution in three salmonids Salvelinus namaycush, Salvelinus fontinalis and Salmo salar

We compared seawater tolerance, gill Na + /K + -ATPase and Na + /K + /2Cl – cotransporter (NKCC) abundance, and mitochondria-rich cell (MRC) morphology of three salmonids, lake trout Salvelinus namaycush , brook trout Salvelinus fontinalis and Atlantic salmon Salmo salar . They were transferred directly from 0 p.p.t. (parts per thousand; freshwater) to 30 p.p.t. seawater, or transferred gradually from 0 to 10, 20 and 30 p.p.t. at 1-week intervals and kept in 30 p.p.t. for 3 weeks. The survival rates of lake trout, brook trout and Atlantic salmon were 80%, 50% and 100% following direct transfer, and 80%, 100% and 100% during gradual transfer, respectively. Plasma Na + , K + and Cl – concentrations in surviving lake trout increased rapidly and remained at high levels in 30 p.p.t. of both direct and gradual transfer, whereas those in brook trout showed a transient increase following direct transfer but did not change significantly during gradual transfer. Only minor changes in plasma ions were observed in Atlantic salmon smolts in both direct and gradual transfer. These results suggest that lake trout retains some degree of euryhalinity and that brook trout possesses intermediate euryhalinity between lake trout and Atlantic salmon smolts. Gill Na + /K + -ATPase activity of lake trout and brook trout increased in seawater, whereas that of Atlantic salmon smolts was already upregulated in freshwater and remained high after seawater exposure. NKCC abundance was upregulated in parallel with gill Na + /K + -ATPase activity in each species. Immunocytochemistry with anti-Na + /K + -ATPaseα -subunit and anti-NKCC revealed that the two ion transporters were colocalized on the basolateral membrane of gill MRCs. Immunopositive MRCs were distributed on both primary filaments and secondary lamellae in all three species kept in freshwater; following transfer to seawater this pattern did not change in lake trout and brook trout but lamellar MRCs disappeared in Atlantic salmon. Previous studies on several teleost species have suggested that filament and lamellar MRCs would be involved in seawater and freshwater acclimation, respectively. However, our results in lake trout and brook trout suggest that lamellar MRCs could be also functional during seawater acclimation.

Journal of Experimental Biology↗

Characterization of microbially Fe(III)-reduced nontronite: Environmental cell-transmission electron microscopy study

Microstructural changes induced by the microbial reduction of Fe(III) in nontronite by Shewanella oneidensis were studied using environmental cell (EC)-transmission electron microscopy (TEM), conventional TEM, and X-ray powder diffraction (XRD). Direct observations of clays by EC-TEM in their hydrated state allowed for the first time an accurate and unambiguous TEM measurement of basal layer spacings and the contraction of layer spacing caused by microbial effects, most likely those of Fe(III) reduction. Non-reduced and Fe(III)-reduced nontronite, observed by EC-TEM, exhibited fringes with mean d 001 spacings of 1.50 nm (standard deviation, σ = 0.08 nm) and 1.26 nm (σ = 0.10 nm), respectively. In comparison, the same samples embedded with Nanoplast resin, sectioned by microtome, and observed using conventional TEM, displayed layer spacings of 1.0–1.1 nm (non-reduced) and 1.0 nm (reduced). The results from Nanoplast-embedded samples are typical of conventional TEM studies, which have measured nearly identical layer spacings regardless of Fe oxidation state. Following Fe(III) reduction, both EC- and conventional TEM showed an increase in the order of nontronite selected area electron diffraction patterns while the images exhibited fewer wavy fringes and fewer layer terminations. An increase in stacking order in reduced nontronite was also suggested by XRD measurements. In particular, the ratio of the valley to peak intensity ( v/p ) of the 1.7 nm basal 001 peak of ethylene glycolated nontronite was measured at 0.65 (non-reduced) and 0.85 (microbially reduced).

Clays and Clay Minerals↗

Effects of dietary selenium and vitamin E on red blood cell peroxidation, glutathione peroxidase activity, and macrophage superoxide anion production in channel catfish

Fingerling channel catfish Ictalurus punctatus were fed purified diets either unsupplemented and deficient in both selenium and vitamin E, deficient in either selenium or vitamin E, adequate in both selenium (0.2 mg/kg) and vitamin E (60 mg/kg), or excessive in both nutrients (four times the recommended levels). After 115–120 d of feeding the experimental diets, the red blood cell membranes offish fed diets deficient in vitamin E were more susceptible to peroxidation than were those of fish fed diets that met or exceeded vitamin E recommendations. Hepatic, selenium-dependent glutathione peroxidase activity was suppressed in fish fed diets deficient in selenium when compared with this enzyme activity in fish fed diets containing recommended or higher levels of selenium. Intracellular superoxide anion production of macrophages was higher in fish fed the diet fortified with four times the recommended levels of both nutrients than in fish fed the other diets. None of the results indicated that selenium and vitamin E were complementing each other or that one nutrient was compensating for a deficiency of the other. The results of this study support the presently recommended levels of selenium and vitamin E for channel catfish diets and indicate that higher-than-recommended levels of one or both nutrients may enhance macrophage function.

Journal of Aquatic Animal Health↗

Effect of FeS on the unit cell edge of sphalerite, a revision

Redeterminations of the relation between the composition and unit-cell size of Fe-bearing sphalerites, necessitated because of partial oxidation of the FeS sample used in earlier measurements, are presented. It is noted that the Fe-ZnS solvus curve may also require revision and should be used with caution, particularly for temperature determinations in the higher ranges.

Economic Geology↗

Pressure calibrants in the hydrothermal diamond-anvil cell

Based on the equation of state of water (EOSW), experimental pressure in the hydrothermal diamond-anvil cell (HDAC) using pure water or dilute aqueous solutions as a pressure medium can be accurately determined at each measured temperature. Consequently, meaningful interpretations can be obtained for observations in the HDAC, which has been widely accepted as a versatile, modern apparatus for hydrothermal experiments. However, this is not true when other pressure media were used because there is no reliable way to determine experimental pressure other than the use of in situ pressure sensors. Most of the available pressure sensors are difficult to apply because they either require expensive facilities to perform the measurements or are unable to provide the accuracy needed for the interpretation of hydrothermal experiments. The only exception is to use the interferometric method to detect the ??-?? quartz transition, although such applications are limited to temperatures above 573??C. In this study, three pressure calibrants were calibrated for applications at lower temperatures, and they were based on visual observation of the ferroelastic phase transitions in BaTiO3 (tetragonal/cubic), Pb3(PO4)2 (monoclinic/trigonal), and PbTiO3 (tetragonal/cubic). For the phase transitions in BaTiO3 and Pb3(PO4)2, the temperature at which twinning disappears during heating was taken as the transition temperature (Ttr); the phase transition pressures (Ptr) can be calculated, respectively, from Ptr (MPa; ??3%) = 0.17 - 21.25 [(Ttr) - 115.3], and Ptr (MPa; ??2%) = 1.00 - 10.62 [(Ttr) - 180.2], where Ttr is in ??C. For the phase transition in PbTiO3, the temperature at which the movement of phase front begins (or ends) on heating (or cooling) was taken as the transition temperature (Ttr,h or Ttr,c), and the phase transition pressures on heating (Ptr,h) and cooling (Ptr,c) can be calculated from Ptr,h (MPa; ??4%) = 7021.7 - 14.235 (Ttr,h), and Ptr,c (MPa; ??4%) = 6831.3 - 14.001 (Ttr,c). Phase transitions for these three pressure calibrants are easy to detect visually, and their P-T phase boundaries have negative slopes and intersect isochors of most of the geologic fluids at high angles and, therefore, are easy to apply. Copyright ?? 2007 by V. H. Winston & Son, Inc. All rights reserved.

International Geology Review↗

Beach morphology monitoring in the Columbia River Littoral Cell: 1997-2005

This report describes methods used, data collected, and results of the Beach Morphology Monitoring Program in the Columbia River Littoral Cell (CRLC) from 1997 to 2005. A collaborative group primarily consisting of the US Geological Survey and the Washington State Department of Ecology performed this work. Beach Monitoring efforts consisted of collecting topographic and bathymetric horizontal and vertical position data using a Real Time Kinematic Differential Global Positioning System (RTK-DGPS). Sediment size distribution data was also collected as part of this effort. The monitoring program was designed to: 1) quantify the short- to medium-term (seasonal to interannual) beach change rates and morphological variability along the CRLC and assess the processes responsible for these changes; 2) collect beach state data (i.e., grain size, beach slope, and dune/sandbar height/position) to enhance the conceptual understanding of CRLC functioning and refine predictions of future coastal change and hazards; 3) compare and contrast the scales of environmental forcing and beach morphodynamics in the CRLC to other coastlines of the world; and 4) provide beach change data in a useful format to land use managers.

Oregon, Washington↗