USGS ScienceSearch

USGS · 70169923

A Bayesian approach for temporally scaling climate for modeling ecological systems

Abstract

With climate change becoming more of concern, many ecologists are including climate variables in their system and statistical models. The Standardized Precipitation Evapotranspiration Index (SPEI) is a drought index that has potential advantages in modeling ecological response variables, including a flexible computation of the index over different timescales. However, little development has been made in terms of the choice of timescale for SPEI. We developed a Bayesian modeling approach for estimating the timescale for SPEI and demonstrated its use in modeling wetland hydrologic dynamics in two different eras (i.e., historical [pre-1970] and contemporary [post-2003]). Our goal was to determine whether differences in climate between the two eras could explain changes in the amount of water in wetlands. Our results showed that wetland water surface areas tended to be larger in wetter conditions, but also changed less in response to climate fluctuations in the contemporary era. We also found that the average timescale parameter was greater in the historical period, compared with the contemporary period. We were not able to determine whether this shift in timescale was due to a change in the timing of wet–dry periods or whether it was due to changes in the way wetlands responded to climate. Our results suggest that perhaps some interaction between climate and hydrologic response may be at work, and further analysis is needed to determine which has a stronger influence. Despite this, we suggest that our modeling approach enabled us to estimate the relevant timescale for SPEI and make inferences from those estimates. Likewise, our approach provides a mechanism for using prior information with future data to assess whether these patterns may continue over time. We suggest that ecologists consider using temporally scalable climate indices in conjunction with Bayesian analysis for assessing the role of climate in ecological systems.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Max Post van der Burg, Michael J. Anteau, Lisa A. McCauley, Mark T. Wiltermuth. 2016-03-28. A Bayesian approach for temporally scaling climate for modeling ecological systems. https://doi.org/10.1002/ece3.2092

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related USGS reports

Conflicts and collisions with an endangered carnivore: Landscape drivers and spatial risk pattern

Human–wildlife conflicts and anthropogenic mortality are expected to increase with the continuous encroachment on natural habitats within and around protected areas, yet the processes governing these risks remain poorly understood. We investigated the spatiotemporal dynamics and drivers of two distinct processes involving the endangered Florida panther ( Puma concolor coryi ; hereafter, panther): (1) direct human–panther interactions and livestock depredation (hereafter, conflicts), and (2) vehicle collisions (hereafter, collisions). Using long-term data collected between 2006 and 2022 within the panther's breeding range in Southwest Florida, USA, we applied dynamic occupancy models to estimate probabilities of occurrence, colonization, and extinction of conflicts and collisions while accounting for imperfect detection. A total of 277 conflicts and 239 collisions were recorded during the study period. Occurrence probabilities for both conflicts and collisions increased during the early years of the study and subsequently stabilized. Landscape configuration consistently showed strong associations with both processes. Conflicts were more likely in areas with fragmented but closely spaced habitat patches, whereas collisions were more likely along road segments characterized by connected landscapes with low resistance to panther movement. In contrast, areas that showed greater distances between habitat patches and increased proportions of protected area were associated with lower probabilities of conflict or collision persistence over time. A predictive map was created to highlight areas with high probability of conflict and road segments with high probability of collision in Southwest Florida, USA. Identifying areas with elevated risk can inform targeted mitigation strategies, including habitat management, wildlife crossings, and outreach efforts, and further support long-term coexistence between humans and large carnivore populations.

Florida

Disease, drought, and warming: A triple threat to a declining high-elevation amphibian

Managing species in an uncertain future is a reality for natural resource decision makers. Climate change is expected to exacerbate threats such as habitat loss and disease, and cause phenological mismatches, but there is uncertainty in the magnitude of these effects. Amphibians are among the most threatened taxa on earth, and most species in North America are uniquely tied to water availability for breeding, larval development, thermal refugia, and food availability. Changes in water availability and temperature may result in phenological mismatches with one or more of these processes. Thus, quantifying the dependency of amphibians to water on the landscape is critical to understanding how species may respond, as well as understanding the interplay with other threats, such as disease. We developed a dynamic co-occurrence occupancy model to explore the effects of climate change on the breeding occurrence of boreal toads ( Anaxyrus boreas ) and the amphibian chytrid fungus ( Batrachochytrium dendrobatidis , Bd) in the southern Rocky Mountains (SRM). We derived novel covariates to test hypotheses related to multi-generational impacts of climate on the dynamics of both boreal toad breeding and Bd. We report estimates of current (2001–2019) and future (2055–2069) occupancy under a range of plausible climate scenarios. The probability of boreal toad breeding occurrence at a site in the SRM declined > 40% from 2001 to 2019, and further declines are likely under future scenarios, particularly as active season length increases. To help integrate this information into management, we developed a web-based decision support tool to summarize predicted future hydrological and occupancy conditions.

Colorado, New Mexico, Wyoming

A 2.5 km movement by a potentially ill white-tailed deer along Nantasket Beach in suburban Massachusetts, USA

White-tailed deer ( Odocoileus virginianus ) ecology has received significant research attention, yet there is a need for further synthetic work on the species across environmental contexts and research areas. Opportunistic natural history accounts can help identify new conceptual links and research directions by offering new observations and ideas, synthesizing context from the literature, and highlighting gaps in understanding. We provide an opportunistic account of a 2.5 km movement of a white-tailed deer walking, wading, and swimming along Nantasket Beach in a suburban context in Massachusetts, USA. The deer displayed behaviors that could potentially be reflective of trauma, disorientation, or illness, including possibly symptomatic head movements and crouching behavior. The behavior of the deer may also have been influenced by the coastal and suburban context in which the observation took place. Our account explores swimming, deer behavior, and possible illness in a coastal, suburban context. We highlight the need for additional research on the ecology and management of white-tailed deer, including swimming and disease in coastal, marine, and developed contexts, and intersections across these areas.

Massachusetts