USGS ScienceSearch

USGS · 70036583

The use (and misuse) of sediment traps in coral reef environments: Theory, observations, and suggested protocols

Abstract

Sediment traps are commonly used as standard tools for monitoring “sedimentation” in coral reef environments. In much of the literature where sediment traps were used to measure the effects of “sedimentation” on corals, it is clear from deployment descriptions and interpretations of the resulting data that information derived from sediment traps has frequently been misinterpreted or misapplied. Despite their widespread use in this setting, sediment traps do not provide quantitative information about “sedimentation” on coral surfaces. Traps can provide useful information about the relative magnitude of sediment dynamics if trap deployment standards are used. This conclusion is based first on a brief review of the state of knowledge of sediment trap dynamics, which has primarily focused on traps deployed high above the seabed in relatively deep water, followed by our understanding of near-bed sediment dynamics in shallow-water environments that characterize coral reefs. This overview is followed by the first synthesis of near-bed sediment trap data collected with concurrent hydrodynamic information in coral reef environments. This collective information is utilized to develop nine protocols for using sediment traps in coral reef environments, which focus on trap parameters that researchers can control such as trap height (H), trap mouth diameter (D), the height of the trap mouth above the substrate (z o ), and the spacing between traps. The hydrodynamic behavior of sediment traps and the limitations of data derived from these traps should be forefront when interpreting sediment trap data to infer sediment transport processes in coral reef environments.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

C. D. Storlazzi, M.E. Field, Michael H. Bothner. 2010-12-17. The use (and misuse) of sediment traps in coral reef environments: Theory, observations, and suggested protocols. https://doi.org/10.1007/s00338-010-0705-3

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related USGS reports

Assessment of antibiotic resistance genes in Caribbean corals, including those treated with amoxicillin

The decimation of reefs from stony coral tissue loss disease prompted the use of a topical amoxicillin treatment to prevent coral mortality. Application of this treatment led to concerns about unintentional impacts such as potential alteration of the coral microbiome and possible spread of antibiotic resistance. We used three different methodologies—microbial RNA sequencing, 16S rRNA amplicon surveys, and microbial qPCR array—to assess these concerns and to establish a baseline of antibiotic resistance genes (ARGs) in untreated coral microbes. We conducted microbial RNA sequencing on wild Montastraea cavernosa coral mucus samples collected before and 24 h after amoxicillin application. While diverse antibiotic resistance genes (ARGs) were expressed, no differences in ARG expression were detected after amoxicillin treatment. Additionally, there were no notable changes in the microbial communities between the before and after samples. In a separate experiment, a microbial qPCR array was used to assess differences in ARGs over longer timescales using cores from wild Colpophyllia natans , comparing never-treated corals with ones treated a single time seven months prior and with those treated multiple times seven months and more prior. No clinically relevant ARGs were detected across any samples. A small number of above-detection reads (4 in the never-treated corals, 2 in the once-treated corals, and 0 in the multi-treated corals) may indicate weak amplification of similar environmental (non-anthropogenic) ARGs in the corals. Results indicate that the localized topical application of amoxicillin to prevent mortality of SCTLD-affected corals does not: (1) significantly disrupt microbiomes, (2) increase ARG expression in adjacent tissues of these species within 24 h, nor (3) increase abundance of clinically relevant ARGs over a 7 month time period.

Florida

Impact of warming and suspended terrigenous sediment on the Hawaiian reef coral Montipora capitata

Coral reefs near high human population areas suffer from sedimentation and increased turbidity due to coastal development. However, there is limited research on how key species respond to turbidity caused by terrigenous sediment and how this response may change with increased water temperatures. This study investigated the effects of ambient and elevated turbidity (+ 26 NTU) in combination with ambient (27.1 °C) and elevated temperature (+ 4.1 °C; 31.2 °C) on the dominant Hawaiian reef coral Montipora capitata , collected from two Kāneʻohe Bay watersheds with distinct environmental histories. Using intermittent flow respirometry, we found that acute (12 h) exposure to elevated turbidity and temperature impacted algal symbionts ( Symbiodinium spp. ) but not the coral host, suggesting a potential delayed host physiological response. Corals from south Kāneʻohe Bay, where restricted water circulation and urbanization have degraded water quality, were more sensitive to stressors than those from the less-impacted northern sites, indicating that physiological responses vary by location and may be influenced by watershed conditions. The findings suggest that while short-term turbidity and warming impact Symbiodinium spp. immediately, prolonged exposure may lead to cascading effects on the coral host. Understanding these species-specific and location-dependent responses enhances our ability to guide restoration and conservation efforts for coral ecosystems facing both local (turbidity) and global (warming) stressors.

Hawaii

Complex sound scattering layer and water-column dynamics over a mesophotic coral ecosystem: Southwest Puerto Rico, U.S.A.

A nearly 5-month record of high-resolution temperature and acoustic backscatter profiles from the upper insular slope off southwest Puerto Rico reveals complex sound scattering layer (SSL) dynamics over a mesophotic coral ecosystem (MCE). The SSLs exhibited both diel and reverse diel vertical migration, thin layer (< 5 m) and multiple layer formations, depth modulation due to internal waves, and vertical layering in the absence of water column stratification. The long-term observations also capture SSL and water column dynamics across changing seasons and two category five hurricanes, Irma and María. The SSLs, likely comprosed of zooplankton, represent an important food source for both the sessile ( e.g. , corals and sponges) and mobile ( e.g. , fish) MCE taxa, and their effective vertical mobility underscores their importance to trophic connectivity between the upper and lower slope MCEs, as well as the shelf. Our results also underscore the challenges in adequately resolving zooplankton aggregations using conventional sampling techniques.

Puerto Rico