USGS ScienceSearch

USGS · 70013132

Time scales of change in the San Francisco Bay benthos

Abstract

Results from multi-year investigations in the San Francisco Bay estuary show that large abundance fluctuations within benthic macroinvertebrate populations reflect both (1) within-year periodicity of reproduction, recruitment, and mortality that is not necessarily coincident with seasonal changes of the environment (e.g., the annual temperature cycle), and (2) aperiodic density changes (often larger than within-year fluctuations) following random perturbations of the environment. Density peaks of the small, short-lived estuarine invertebrates that comprise the vast majority of individuals in the bay's relatively homogeneous benthic community normally occur between spring and autumn depending on the species, in large part a reflection of reproductive periodicity. However, because mild winters permit reproductive activity in some of the common species throughout much of the year, other factors are important to within-year density fluctuations in the community. Seasonally predictable changes in freshwater inflow, wind and tidal mixing, microalgal biomass, and sediment erosion/deposition patterns all contribute to observed seasonal changes in abundance. For example, the commonly observed decline in abundance during winter reflects both short-lived species that die after reproducing and the stress of winter conditions (e.g., inundation by less saline, sediment-laden water and the decline in both planktonic and benthic algal biomass - a direct source of food for the shallow-water benthos). On the other hand, data from several studies suggest that observed 'recruitment' and 'mortality' may in fact be the migration of juveniles and adults to and from study sites. For example, the common amphipod Ampelisca abdita apparently moves from shallow to deep water, or from up-estuary to down-estuary locations, coincident with periods of high river runoff in winter. Growth of individuals within the few studied species populations is also highly seasonal, and appears to be coincident with seasonal increases in the abundance of planktonic and/or benthic microalgae. Two multi-year studies have shown that, in addition to within-year periodicity, major restructuring of the benthic community can occur as a result of anomalous (usually climate-related) perturbations of the benthic habitat. For example, during wet years freshwater-intolerant species disappear from the upper part of the estuary and from shallow areas of the bay. During a two-year drought these same species colonized the extreme upper end of the estuary in large numbers. Other aperiodic perturbations include localized instances of sediment erosion or deposition and algal mat accumulations that greatly depress abundance. Additionally, there is evidence (observations that the clam Macoma balthica establishes large populations only when the amphipod A. abdita is not abundant) that species interactions can contribute greatly to interannual variations. Thus, while community composition may change little over the long term, year-to-year predictability of species abundances is low. ?? 1985 Dr W. Junk Publishers.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

F.H. Nichols, J.K. Thompson. 1985. Time scales of change in the San Francisco Bay benthos. https://doi.org/10.1007/bf00048691

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related USGS reports

Long-term predictive modeling of stream condition suggests wide-spread changes within the Chesapeake Bay Watershed, USA

Stream ecosystems worldwide face ongoing degradation, underscoring the urgent need for conservation and restoration. Regional analyses of stream condition have been limited by sparse spatial and temporal data, particularly at long time scales. To address this gap, we used observed data to predict annual biological condition for 360,893 small, nontidal stream reaches in the Chesapeake Bay watershed from 1985 to 2023 (39 years). Predictions were generated using random forest models trained on extensive benthic macroinvertebrate data sets and predictors including natural landscape features, land cover, and climate variables. Four biological metrics were assessed: percent Ephemeroptera, Plecoptera, and Trichoptera excluding Hydropsychidae (EPT-H), percent Ephemeroptera, percent clinger functional group, and the Index of Biological Integrity (IBI). Results revealed degraded biological conditions near Washington, D.C. and Baltimore, Maryland, with declining trends across all metrics in these urbanized areas. Spatial heterogeneity was evident: IBI and clinger percentages increased in many southern streams but declined in northern streams, whereas EPT-H and Ephemeroptera decreased watershed wide except in the Southeastern Plains bioregion. By 2021, watershed wide IBI improvements were predicted for 0.9–1.1% of stream length, falling short of management goals. This study demonstrates the utility of long-term data and machine learning for predicting stream condition, identifying key stressors, and guiding restoration and conservation site selection.

Delaware, Maryland, New York, Pennsylvania, Virgin

Understanding co-invading species’ ecological strategies and interactions with causal inference and simple dynamic models: Bighead (Hypophthalmichthys nobilis) and Silver carp (H. molitrix) in the Illinois River, USA

Species interactions among multiple invasive species can present hidden challenges for management and eradication efforts. Bighead and Silver carp ( Hypophthalmichthys nobilis and H. molitrix , respectively) are closely related species that have co-invaded the Mississippi River and many of its tributaries, including the Illinois River. We used a combination of causal inference and dynamic models to test for interspecific interactions in a 10-year data set of hydroacoustic density data from the Illinois River. The results suggest that Bighead and Silver carp are exploiting different ecological strategies; where Bighead carp shows fast initial growth but low equilibrium density and Silver carp had a lower low-density growth rate but larger equilibrium population density. Further, we found evidence for a positive interspecific effect of Silver carp on Bighead carp. The mechanism leading to the observed positive interactions is unknown, but could be an effect of ecological facilitation, differential responses to harvest of both species, or hybridization and introgression. Finally, while these results provide valuable information in the ecological strategies and relationships between these species, simulations of the resulting models suggest that the magnitude of the positive interaction is likely too small to be exploited for innovative multispecies management interventions.

Illinois

Spatial and temporal drivers of variability in abundance of two stream fishes

An understanding of how and why animal populations vary in space and time informs effective conservation and management. We used spatial and temporal flow metrics to explore flow-ecology relationships for two fish species, Mountain Sucker Pantosteus platyrhynchus (Cope, 1874) and Mottled Sculpin Cottus bairdii Girard, 1850, across 64 sites and 8 years in Wyoming, U.S.A. We found variation in Mottled Sculpin and Mountain Sucker abundance was driven to a greater extent by spatial flow metrics (e.g., drainage area, median summer flow) with differing direction of response between species. The opposing responses to spatial variation in median summer flow could reflect the ability of Mountain Sucker to persist in non-perennial habitats, likely due to their relatively high mobility and recolonization capacity. Responses to temporal flow metrics (e.g., previous year spring flow, previous year autumn flow) were weaker but consistent across species likely due to similar reproductive strategies and timing. The lack of stronger flow effects on population variability in both species likely corresponds to high variability in local habitat characteristics that are mediating population response. These findings underscore how considering spatial context informs conservation planning and suggest that flow-ecology relationships may be mediated by species-specific traits and local habitat conditions.

Wyoming