Geology topics

Research about Willamette River

Source-linked reports with geographic coverage including Willamette River.

17 recordsLinked to original sources

USGS2023

Expansion of smallmouth bass distribution and habitat overlap with juvenile Chinook salmon in the Willamette River, Oregon

Smallmouth bass populations have expanded far beyond their native range and these predatory fish present a pervasive threat to native aquatic species throughout North America. In the western United States, smallmouth bass are now present in river and reservoir habitats where Pacific salmon are found and are considered a potential threat to salmon recovery in many locations. We conducted a study to determine if smallmouth bass are expanding their range in the mainstem Willamette River, Oregon, and developed a model to assess habitat overlap between smallmouth bass and juvenile Chinook salmon. Sampling during 2011–2022 revealed that the distribution of smallmouth bass had expanded throughout that timeframe to encompass the entire mainstem Willamette River, including important rearing habitats for juvenile Chinook salmon. The model predicted that smallmouth bass and juvenile Chinook salmon habitat overlap was substantial, highlighting the need for additional research to evaluate for potential negative impacts to salmon recovery in the basin. The model was also used to evaluate the efficacy of using flow management to reduce interactions between these two species, but the scenarios we examined suggested that this was not a viable option. These results highlight the need for continued research to assess interactions between smallmouth bass and juvenile salmon, and other native species of concern, in the Willamette River Basin. The development of the model is useful for resource managers to understand interactions between these species to prioritize locations for sampling in the future.

Oregon↗

USGS2022

Monitoring framework to evaluate effectiveness of aquatic and floodplain habitat restoration activities for native fish along the Willamette River, northwestern Oregon

Since 2008, large-scale restoration programs have been implemented along the Willamette River, Oregon, to address historical losses of floodplain habitats caused by dam construction, bank protection, large wood removal, land conversion, and other anthropogenic influences. The Willamette Focused Investment Partnership (WFIP) restoration initiative brings together more than 16 organizations to improve floodplain habitats on more than 35,000 hectares upstream from Willamette Falls with the overarching goal to expand and enhance native fish habitats through the following restoration activities implemented along the floodplains and off-channel areas of the Willamette River: (A) modify floodplain topography and human-made barriers to inundation; (B) enhance gravel pits; (C) remove revetments; (D) construct off-channel features; (E) increase and enhance floodplain forest vegetation; and (F) treat aquatic invasive plant species (AIS). The WFIP Effectiveness Monitoring Program was initiated to inform future refinement of Willamette River restoration program goals and activities and has three goals: (1) evaluate the effectiveness of different restoration activities at increasing and enhancing native fish habitat, (2) improve overall understanding of the physical and ecological responses associated with different restoration activities undertaken by the WFIP, and (3) relate site-scale responses to restoration with broader patterns of fish communities, hydrogeomorphology, stream temperature, and vegetation across the Willamette River floodplain, so that the relative importance of restoration activities on habitat availability for native fish can be assessed. A monitoring framework was developed to evaluate effectiveness of floodplain restoration activities at increasing and enhancing habitat for native fish in the Willamette River corridor, northwestern Oregon. This framework describes monitoring indicators, metrics, and approaches for evaluating responses in native fish communities and physical habitat conditions to restoration activities and determining effectiveness of restoration activities at improving habitats for native fish. The monitoring indicators and approaches are grouped into five restoration monitoring categories that are useful for characterizing ecological and physical habitat responses to restoration activities: fish, hydrogeomorphology, floodplain forest vegetation, birds, and AIS. This monitoring framework provides a common science foundation to support collaborative decisions on future interdisciplinary effectiveness monitoring activities for Willamette River restoration programs. To evaluate restoration effectiveness, data must be evaluated according to metrics and thresholds that permit direct comparison between habitat conditions at the restoration site and restoration program goals; this framework provides examples of metrics and thresholds for evaluating data, recognizing that the precise evaluation criteria for a particular site or program will need to be tailored to meet program questions and available resources. Refining restoration goals and activities as part of an adaptively managed process requires addressing critical uncertainties between restoration goals, restoration activities, and outcomes for habitats used by native fish. Although the monitoring activities of this framework will generate important datasets useful for evaluating restoration effectiveness, additional research, syntheses, and reporting is ultimately necessary to provide a common science foundation to support adaptively managed restoration programs. This report is intended as a resource for restoration program managers, practitioners, scientists, and contractors as they develop detailed annual monitoring plans for data collection and identify the monitoring indicators, metrics, and approaches that are appropriate for evaluating effectiveness of different restoration activities.

Oregon↗

USGS2022

Assessment of habitat availability for juvenile Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) in the Willamette River, Oregon

The Willamette River, Oregon, is home to two salmonid species listed as threatened under the Endangered Species Act, Upper WIllamette River spring Chinook salmon ( Oncorhynchus tshawytscha ) and Upper Willamette River winter steelhead ( O. mykiss ). Streamflow in the Willamette River is regulated by upstream dams, 13 of which are operated by the U.S. Army Corps of Engineers (USACE) as part of the Willamette Valley Project. In 2008, these dams were determined to have a deleterious effect on Endangered Species Act-listed salmonids, resulting in USACE taking actions to mitigate those effects. Mitigation actions included setting seasonal streamflow targets at various locations along the river to improve survival and migration of juvenile salmonids. Although these targets were established with the best available information at the time, recent data and models have advanced understanding of Willamette River bathymetric, hydraulic, and thermal conditions, allowing for a more robust analysis of the effect of streamflow on downstream habitat. This study integrates those recent advances to build high-resolution models of usable habitat for juvenile Chinook salmon and steelhead to assess variation in spatial and seasonal patterns of habitat availability. Specifically, this study develops detailed maps of habitat availability for juvenile Chinook salmon and steelhead for two size classes (fry and pre-smolt). Habitat availability is modeled in a three-step process whereby (1) two-dimensional hydraulic models are paired with literature-supplied data on habitat preferences to create spatially explicit maps of rearing habitats for a wide range of streamflows; (2) reach-specific relations between streamflow and habitat area are developed and paired with streamgage records to create habitat time series for 2011, 2015, and 2016, which reflect “cool and wet,” “hot and dry,” and “warm but average precipitation” conditions, respectively; (3) temperature models are coupled with literature-based thermal thresholds to determine time periods and locations along the river corridor when rearing habitat has optimal, harmful, or lethal temperature conditions; (4) finally, habitat availability is summarized at several spatial scales to characterize longitudinal and seasonal patterns. Findings show that modeled area of rearing habitat for Chinook salmon and steelhead responds non-uniformly to streamflow, where habitat in some reaches of the Willamette River consistently increase with additional streamflow, while in other reaches, habitat area decreases when streamflows increase from low to moderate flows. Modeled differences in flow-habitat relations are primarily explained by local geomorphology in each reach and resulting hydraulic conditions that arise with different streamflows. These are most pronounced when comparing laterally active, multi-channel reaches upstream from Corvallis with downstream reaches that are laterally stable with single-channel planforms. The reaches upstream from Corvallis generally have more habitat available per unit stream distance than downstream reaches, but all reaches display greatest amounts of habitat at the highest streamflows. Finally, results show that warm water temperature in summer greatly decreases the utility of habitat available to the focal species, particularly downstream from Corvallis. Together, these findings serve to inform flow management by characterizing spatial and seasonal patterns of habitat availability for juvenile spring Chinook salmon and winter steelhead and provide a quantitative assessment of the effects of streamflow on rearing habitat.

Oregon↗

USGS2022

Development of continuous bathymetry and two-dimensional hydraulic models for the Willamette River, Oregon

The Willamette River is home to at least 69 species of fish, 33 of which are native, including Chinook salmon ( Oncorhynchus tshawytscha ) and steelhead ( Oncorhynchus mykiss ). These fish need suitable hydraulic conditions, such as water depth and velocity, to fulfill various stages of their life. Hydraulic conditions are driven by interactions between channel morphology and streamflow, which throughout the Willamette River are strongly influenced by the operation of flood-control dams in upstream tributaries. To assess how streamflow management at these dams affects downstream fish habitat, the U.S. Geological Survey has developed high-resolution bathymetric datasets to support the development of two-dimensional hydraulic models. The datasets were created by combining data collected by airborne topo-bathymetric Light Detection and Ranging with boat-based sonar to create a seamless modeling surface over which a computational mesh with a resolution of roughly 5 by 5 meters was overlaid using the U.S. Army Corps of Engineers Hydraulic Engineering Center’s River Analysis System 5.0.7 hydraulic modeling software. Models were developed for about 200 river kilometers, separated into five modeling reaches, and hydraulic conditions were simulated at flows ranging from extremely low values to annual peak flows. Results of the simulations highlight distinct patterns of inundation extents, water depths, and velocities that vary longitudinally along the Willamette River. In the two farthest upstream model reaches, from Eugene to Corvallis, the river is slower, shallower, and inundates more area at similar seasonal flows than in reaches downstream from Corvallis, where the river generally is deeper and faster. These findings align with previous geomorphic analysis of the Willamette River showing the upper reaches of the river to be geomorphically more dynamic compared to the largely single-thread channel farther downstream. Results of simulations made with these hydraulic models can be used to drive fish-habitat models to further inform flow-management decisions.

Oregon↗

USGS2021

Synthesis of habitat availability and carrying capacity research to support water management decisions and enhance conditions for Pacific salmon in the Willamette River, Oregon

Flow management is complex in the Willamette River Basin where the U.S. Army Corps of Engineers owns and operates a system of 13 dams and reservoirs (hereinafter Willamette Project), which are spread throughout three large tributaries including the Middle Fork Willamette, McKenzie, and Santiam Rivers. The primary purpose of the Willamette Project is flood-risk management, which provides critical protection to the Willamette Valley, but flow managers must also consider factors such as power generation, water-quality improvement, irrigation, recreation, and protection for aquatic species such as U.S. Endangered Species Act-listed Chinook salmon ( Oncorhynchus tshawytscha ) and steelhead ( O. mykiss ). Flow-management decision-making in the basin can benefit from models that allow for flow-scenario comparisons and a wide range of modeling methods are available. For this study, we examined existing datasets and modeling efforts in the basin and provided an overview of available options. Most previous studies used Physical Habitat Simulation System, habitat data were collected from a series of transects within modeled reaches, and habitat suitability indices were obtained from the literature, or using expert opinion. These studies provide information for specific reaches of the Willamette River Basin, which limits their ability to provide broad-scale predictive capability. Recent efforts to develop a two-dimensional hydraulic model in the mainstem Willamette River, and in specific reaches of primary tributaries downstream from Project dams, have bolstered modeling capabilities in the basin. This work has developed spatially continuous water depth and velocity data in more than 250 kilometers (km) of river downstream from Project dams and has predictive capability throughout the year at flows up to normal peak levels. Additionally, other methods are described for estimating habitat availability, which include habitat suitability criteria, logistic regression, occupancy and abundance modeling, and energetic based approaches. There are strengths and weaknesses to each approach and selection of the preferred approach in the Willamette River Basin will depend on the desired metrics of interest and the risk tolerance of managers and stakeholders in the basin.

Oregon↗

USGS2020

Comparing environmental flow implementation options with structured decision making: Case study from the Willamette River, Oregon

Many frameworks have been used to identify environmental flows for sustaining river ecosystems or specific taxa in the face of widespread flow alteration for human use. However, these methods mostly focus on identifying suitable flows and largely ignore the important links between management actions, resulting flows, flow variability, and ecosystem or social responses. Structured decision making (SDM) could assist the comparison and implementation of environmental flows by providing a framework to compare effects of flow management actions on objectives via environmental flow science. We describe the SDM process and illustrate its application using a case study focused on comparing environmental flow scenarios for the mainstem Willamette River, Oregon, USA. In a short timeframe, SDM was successfully applied to identify management objectives, develop empirical and expert opinion based models predicting ecological responses, and compare scenarios while accounting for uncertainty and partial controllability. We found that no flow scenario was clearly preferred based on available knowledge, largely because river flows could only be partially controlled through available dam operations. Participants agreed that the SDM process was useful and that an additional iteration focused on refining predictive models and incorporating additional objectives could help better inform dam release decisions for the entire basin. In our view, SDM can provide managers with more realistic comparisons of environmental flows by accounting for partial controllability and uncertainty, which may result in greater implementation of available flow management actions.

Oregon↗

USGS2019

Estimating river discharge with swath altimetry: A proof of concept using AirSWOT observations

The forthcoming Surface Water and Ocean Topography (SWOT) satellite mission will provide global measurements of the free surface of large rivers, providing new opportunities for remote sensing‐derived estimates of river discharge in gaged and ungaged basins. SWOT discharge algorithms have been developed and benchmarked using synthetic data but remain untested on real‐world swath altimetry observations. We present the first discharge estimates from AirSWOT, a SWOT‐like airborne Ka‐band radar, using 6 days of measurements over a 40‐km segment of the Willamette River in Oregon, USA. The three evaluated discharge algorithms estimated discharge with normalized root‐mean‐square errors of 10–31% when compared with in situ gage data but were sensitive to an initial estimate of mean annual discharge. Our results show that these discharge algorithms provide reliable discharge estimates on remotely sensed data at SWOT‐like spatial scales while highlighting the need for further algorithm sensitivity tests.

Oregon↗

USGS2016

Water temperature effects from simulated dam operations and structures in the Middle Fork Willamette River, western Oregon

Significant Findings Streamflow and water temperature in the Middle Fork Willamette River (MFWR), western Oregon, have been regulated and altered since the construction of Lookout Point, Dexter, and Hills Creek Dams in 1954 and 1961, respectively. Each year, summer releases from the dams typically are cooler than pre-dam conditions, with the reverse (warmer than pre-dam conditions) occurring in autumn. This pattern has been detrimental to habitat of endangered Upper Willamette River (UWR) Chinook salmon ( Oncorhynchus tshawytscha ) and UWR winter steelhead ( O. mykiss ) throughout multiple life stages. In this study, scenarios testing different dam-operation strategies and hypothetical dam-outlet structures were simulated using CE-QUAL-W2 hydrodynamic/temperature models of the MFWR system from Hills Creek Lake (HCR) to Lookout Point (LOP) and Dexter (DEX) Lakes to explore and understand the efficacy of potential flow and temperature mitigation options. Model scenarios were run in constructed wet, normal, and dry hydrologic calendar years, and designed to minimize the effects of Hills Creek and Lookout Point Dams on river temperature by prioritizing warmer lake surface releases in May–August and cooler, deep releases in September–December. Operational scenarios consisted of a range of modified release rate rules, relaxation of power-generation constraints, variations in the timing of refill and drawdown, and maintenance of different summer maximum lake levels at HCR and LOP. Structural scenarios included various combinations of hypothetical floating outlets near the lake surface and hypothetical new outlets at depth. Scenario results were compared to scenarios using existing operational rules that give temperature management some priority ( Base ), scenarios using pre-2012 operational rules that prioritized power generation over temperature management ( NoBlend ), and estimated temperatures from a without-dams condition ( WoDams ). Results of the tested model scenarios led to the following conclusions: The existing outlets at Lookout Point Dam, because of the range of depths, allow for greater temperature control than the two existing outlets at Hills Creek Dam that are relatively deep. Temperature control at HCR through operational scenarios generally was minimal near Hills Creek Dam, but improved downstream toward the head of LOP when decreased release rates held HCR at a low lake elevation year-round. Inflows from unregulated streams between HCR and LOP helped to dilute the effects of HCR and achieve more natural stream temperatures before the MFWR entered LOP. The relative benefit of any particular scenario depended on the location in the MFWR system used to assess the potential change, with most scenarios involving changes to Hills Creek Dam being less effective with increasing downstream distance, such as downstream of DEX. To achieve as much temperature control as the most successful structural scenarios, which were able to resemble without-dam conditions for part of the year, most operational scenarios had to be free of any power-generation requirements at Lookout Point Dam. Downstream of DEX, scenarios incorporating a hypothetical floating outlet at either HCR or LOP resulted in similar temperatures, with both scenarios causing a delay in the estimated spring Chinook egg emergence by about 9–10 days compared to base-case temperature-management scenarios.

Oregon↗

USGS2016

Flood-inundation maps for a 9.1-mile reach of the Coast Fork Willamette River near Creswell and Goshen, Lane County, Oregon

Digital flood-inundation maps for a 9.1-mile reach of the Coast Fork Willamette River near Creswell and Goshen, Oregon, were developed by the U.S. Geological Survey (USGS) in cooperation with the U.S. Army Corps of Engineers (USACE). The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/ , depict estimates of the areal extent and depth of flooding corresponding to selected stages at the USGS streamgage at Coast Fork Willamette River near Goshen, Oregon (14157500), at State Highway 58. Current stage at the streamgage for estimating near-real-time areas of inundation may be obtained at http://waterdata.usgs.gov/or/nwis/uv/?site_no=14157500&PARAmeter_cd=00065,00060 . In addition, the National Weather Service (NWS) forecasted peak-stage information may be used in conjunction with the maps developed in this study to show predicted areas of flood inundation. In this study, areas of inundation were provided by USACE. The inundated areas were developed from flood profiles simulated by a one-dimensional unsteady step‑backwater hydraulic model. The profiles were checked by the USACE using documented high-water marks from a January 2006 flood. The model was compared and quality assured using several other methods. The hydraulic model was then used to determine eight water-surface profiles at various flood stages referenced to the streamgage datum and ranging from 11.8 to 19.8 ft, approximately 2.6 ft above the highest recorded stage at the streamgage (17.17 ft) since 1950. The intervals between stages are variable and based on annual exceedance probability discharges, some of which approximate NWS action stages. The areas of inundation and water depth grids provided to USGS by USACE were used to create interactive flood‑inundation maps. The availability of these maps with current stage from USGS streamgage and forecasted stream stages from the NWS provide emergency management personnel and residents with information that is critical for flood response activities, such as evacuations and road closures as well as for post flood recovery efforts.

Oregon↗

USGS2014

Investigation of methods for successful installation and operation of Juvenile Salmon Acoustic Telemetry System (JSATS) hydrophones in the Willamette River, Oregon, 2012

Acoustic telemetry equipment was installed at three sites in the Willamette River during October 2012 to test the effectiveness of using the Juvenile Salmon Acoustic Telemetry System to monitor the movements of fish in a high-flow, high-velocity riverine environment. Hydrophones installed on concrete blocks were placed on the bottom of the river, and data cables were run from the hydrophones to shore where they were attached to anchor points. Under relatively low-flow conditions (less than approximately 10,000 cubic feet per second) the monitoring system remained in place and could be used to detect tagged fish as they traveled downstream during their seaward migration. At river discharge over approximately 10,000 cubic feet per second, the hydrophones were damaged and cables were lost because of the large volume of woody debris in the river and the increase in water velocity. Damage at two of the sites was sufficient to prevent data collection. A limited amount of data was collected from the equipment at the third site. Site selection and deployment strategies were re-evaluated, and an alternate deployment methodology was designed for implementation in 2013.

Oregon↗

USGS2011

Pre-spawning migration of adult Pacific lamprey, Entosphenus tridentatus , in the Willamette River, Oregon, U.S.A.

We describe the migration distances and timing of the adult Pacific lamprey, Entosphenus tridentatus , in the Willamette River Basin (Oregon, U.S.A.). We conducted aerial surveys to track radio-tagged fish upstream of a major waterfall and hydropower complex en route to spawning areas. We detected 24 out of the 43 fish that passed the waterfall-hydropower complex. Of the detected fish, 17 were detected multiple times. Their maximum migration distance upstream in the mainstem Willamette approximated a normal distribution. The maximum distance migrated upstream did not significantly correlate with total body length ( r  = −0.186, P  = 0.385) or date that the fish passed Willamette Falls ( r  = −0.118, P  = 0.582). Fish migrated primarily during the spring to early summer period before stopping during the summer, when peak river temperatures (≥20°C). However, at least three fish continued to migrate upstream after September. Behavior ranged from relatively slow migration, followed by holding; to rapid migration, followed by slow migration further up in the basin. This study provides a basis for informing more detailed research on Pacific lamprey in the future.

Oregon↗

USGS2009

Passage and behavior of radio-tagged adult Pacific Lamprey (Entosphenus tridentata) at the Willamette Falls Project, Oregon, 2005-07

We used radio telemetry to monitor passage and describe behavior characteristics of adult Pacific lampreys, Entosphenus tridentata, during their upstream migration at the Willamette Falls Project (Project) on the Willamette River near Portland, Oregon. Our objectives were to document: (1) specific routes of passage at the dam and falls; (2) duration of passage through different routes; and (3) overall passage success. During the spring through autumn of 2005 and 2006, fish were captured in a trap located in the fishway at the Project or collected by hand from the falls, surgically implanted with a radio tag, and released 2 kilometers downstream of the Project. We radio tagged 136 lampreys in 2005 and 107 in 2006. In both years, more than 90 percent of the fish returned to the Project with a median travel time of 7-9 hours. Most fish were first detected at the Project from about 20:00-23:00 hours. In 2005, 43 fish (35 percent) successfully passed through the fishway of the Project, which has four separate entrances and three distinct passage channels or legs that converge at one exit. Prior to the installation of flashboards around the perimeter of the falls in July, lampreys used all three legs of the fishway to pass the Project. After flashboards were installed, only fishway leg 1 was used. The peak of passage occurred in August. No fish passed over the falls, but 13 percent of the lampreys that traveled to the Project ascended at least partway up the falls. In 2006, 24 fish (23 percent) passed the Project, again primarily using fishway leg 1. Most fish passed prior to June 9 when the powerhouse was shut down due to construction. Although 19 lampreys ascended the falls, only 2 passed through this route in late June and early July. Flashboards were not installed in 2006. For both years, the time it took for fish to pass through the fishway depended on which leg they used - the median passage time was at least 4-5 hours in fishway legs 2 and 3 and ranged from 23 to 74 hours in fishway leg 1. Many fish resided in the tailrace for times ranging from a few hours to almost a year and eventually left the Project and moved downstream. Collectively, our results indicate that passage of radio-tagged upstream migrating Pacific lamprey at the Willamette Falls Project is relatively poor compared to passage success of these fish at dams on the Columbia River. Factors contributing to the low passage of lampreys at the Project may include low flows and water levels at fishway entrances, impediments in the fishways, delayed tagging effects, changing environmental and operational conditions, a learned aversion to a fishway, difficult passage over the falls, or not all lamprey are destined to migrate upstream of the falls.

Oregon↗

USGS2005

Assessing mercury exposure and effects to American dippers in headwater streams near mining sites

To evaluate mercury (Hg) exposure and possible adverse effects of Hg on American dipper ( Cinclus mexicanus ) reproduction, we collected eggs and nestling feathers and the larval/nymph form of three Orders of aquatic macroinvertebrates (Ephemeroptera, Plecoptera and Trichoptera = EPT) important in their diet from three major headwater tributaries of the upper Willamette River, Oregon in 2002. The Coast Fork Willamette River is contaminated with Hg due to historical cinnabar (HgS) mining at the Black Butte Mine; the Row River is affected by past gold-mining operations located within the Bohemia Mining District, where Hg was used in the amalgamation process to recover gold; and the Middle Fork Willamette River is the reference area with no known mining. Methyl mercury (MeHg) concentrations (geometric mean) in composite EPT larvae (111.9 ng/g dry weight [dw] or 19.8 ng/g wet weight [ww]), dipper eggs (38.5 ng/g ww) and nestling feathers (1158 ng/g ww) collected from the Coast Fork Willamette were significantly higher than MeHg concentrations in EPT and dipper samples from other streams. Total mercury (THg) concentrations in surface sediments along the same Hg-impacted streams were investigated by others in 1999 (Row River tributaries) and 2002 (Coast Fork). The reported sediment THg concentrations paralleled our biological findings. Dipper breeding territories at higher elevations had fewer second clutches; however, dipper reproductive success along all streams (including the lower elevation and most Hg-contaminated Coast Fork), was judged excellent compared to other studies reviewed. Furthermore, MeHg concentrations in EPT samples from this study were well below dietary concentrations in other aquatic bird species, such as loons and ducks, reported to cause Hg-related reproductive problems. Our data suggest that either dipper feathers or EPT composites used to project MeHg concentrations in dipper feathers (with biomagnification factor of 10–20×) may be used, but with caution, to screen headwater streams for potential Hg-related effects on dippers. When actual feather concentrations or projected feather concentrations are equal to or lower than concentrations reported for the Coast Fork, dippers are expected to reproduce well (assuming adequate prey and suitable nest sites). When Hg concentrations are substantially higher, more detailed investigations may be required. Birds feeding almost exclusively on fish (e.g., osprey [ Pandion haliaetus ]) and usually found further downstream from the headwaters would not be adequately represented by dippers given the higher MeHg concentrations in fish resulting from biomagnification, compared to lower trophic level invertebrates.

Oregon↗

USGS2005

Environmental stresses and skeletal deformities in fish from the Willamette River, Oregon

The Willamette River, one of 14 American Heritage Rivers, flows through the most densely populated and agriculturally productive region of Oregon. Previous biological monitoring of the Willamette River detected elevated frequencies of skeletal deformities in fish from certain areas of the lower (Newberg pool [NP], rivermile [RM] 26−55) and middle (Wheatland Ferry [WF], RM 72−74) river, relative to those in the upper river (Corvallis [CV], RM 125−138). The objective of this study was to determine the likely cause of these skeletal deformities. In 2002 and 2003, deformity loads in Willamette River fishes were 2−3 times greater at the NP and WF locations than at the CV location. There were some differences in water quality parameters between the NP and CV sites, but they did not readily explain the difference in deformity loads. Concentrations of bioavailable metals were below detection limits (0.6−1 μg/L). Concentrations of bioavailable polychlorinated biphenyls (PCBs) and chlorinated pesticides were generally below 0.25 ng/L. Concentrations of bioavailable polycyclic aromatic hydrocarbons were generally less than 5 ng/L. Concentrations of most persistent organic pollutants were below detection limits in ovary/oocyte tissue samples and sediments, and those that were detected were not significantly different among sites. Bioassay of Willamette River water extracts provided no evidence that unidentified compounds or the complex mixture of compounds present in the extracts could induce skeletal deformities in cyprinid fish. However, metacercariae of a digenean trematode were directly associated with a large percentage of deformities detected in two Willamette River fishes, and similar deformities were reproduced in laboratory fathead minnows exposed to cercariae extracted from Willamette River snails. Thus, the weight of evidence suggests that parasitic infection, not chemical contaminants, was the primary cause of skeletal deformities observed in Willamette River fish.

Oregon↗

USGS2003

Biomagnification factors (fish to osprey eggs from Willamette River, Oregon, U.S.A.) for PCDDS, PCDFS, PCBS, and OC pesticides

A migratory population of 78 pairs of Osprey ( Pandion haliaetus ) nesting along the Willamette River in westernOregon was studied in 1993. The study was designed to determinecontaminant concentrations in eggs, contaminant concentrationsin fish species predominant in the Ospreys diet, andBiomagnification Factors (BMFs) of contaminants from fish specieseaten to Osprey eggs. Ten Osprey eggs and 25 composite samplesof fish (3 species) were used to evaluate organochlorine (OC)pesticides, polychlorinated biphenyls (PCBs), polychlorinateddibenzo-p-dioxins (PCDDs), and polychlorinated dibenzofurans(PCDFs). Mercury was also analyzed in fish. Geometric meanresidues in Osprey eggs were judged low, e.g., DDE 2.3 μg g -1 wet weight (ww), Σ PCBs 0.69 μg g -1 , 2,3,7,8-TCDD 2.3 ng kg -1 , and generally well below known threshold values for adverse effects on productivity, and the population was increasing. Osprey egg residue data presentedby River Mile (RM) are discussed, e.g., higher PCDDs were generally found immediately downstream of paper mills and eggsfrom the Willamette River had significantly elevated PCBs and PCDDs compared to reference eggs collected nearby in the CascadeMountains. Prey remains at nest sites indicated that the Largescale Sucker ( Catostomus macrocheilus ) and NorthernPikeminnow ( Ptychocheilus oregonensis ) accounted for an estimated 90.1% of the biomass in the Osprey diet, and composite samples of these two species were collected from different sampling sites throughout the study area for contaminant analyses. With the large percentage of the fishbiomass in the Osprey diet sampled for contaminants (and fisheaten by Ospreys similar in size to those chemically analyzed),and fish contaminant concentrations weighted by biomass intake, a mean BMF was estimated from fish to Osprey eggs for the largeseries of contaminants. BMFs ranged from no biomagnification(0.42) for 2,3,7,8-TCDF to 174 for OCDD. Our findings for themigratory Osprey were compared to BMFs for the resident HerringGull ( Larus argentatus ), and differences are discussed. Webelieve a BMF approach provides some basic understanding ofrelationships between contaminant burdens in prey species offish-eating birds and contaminants incorporated into their eggs,and may prove useful in understanding sources of contaminants inmigratory species although additional studies are needed.

Oregon↗

USGS2001

Linking hyporheic flow and nitrogen cycling near the Willamette River: A large river in Oregon, USA

Several approaches were used to characterize ground water/surface water interactions near the Willamette River - A large (ninth order) river in Oregon, USA. A series of potentiometric surface maps demonstrated the presence of highly dynamic hydraulic gradients between rivers and the adjacent aquifer. Hyporheic zone gradients extended on the order of hundreds of meters. River gains and losses at the river stretch scale (tens of kilometers) were consistent with fluxes implied by the potentiometric surface maps, and apparently reflect regional ground water/surface water interactions. Gains and losses of up to 5-10% of streamflow were observed at this scale. On the river reach scale (1-2 km), gains and losses on the order of 5% of streamflow were interpreted as representing primarily local hyporheic exchange. Isotopic and chemical data collected from shallow hyporheic zone wells demonstrated interaction between regional ground water and river water. The origin of sampled hyporheic zone water ranged from a mixture dominated by regional ground water to water containing 100% river water. The common assumption that ground and river water mix primarily in the river channel is not applicable in this system. Isotopic and chemical data also indicated that significant (nearly complete) vegetative nitrate uptake and/or nitrate reduction occurred in water from 4 of 12 hyporheic zone sites. In these cases, it was primarily nitrate transported to the hyporheic zone in regional ground water that was removed from solution. Isotopes of water and nitrate indicated that hyporheic zone water sampled at two sites was composed of water originating as river water and demonstrated that significant vegetative nitrate uptake and nitrate reduction occurred along these hyporheic zone flowpaths. Thus, the hyporheic zone may, in some instances, serve to remove nitrate from river water. Additional investigations with chemical tools and microbial enzyme assays were conducted at one hyporheic site. A strong vertical redox gradient was observed, with nitrate-limited denitrification potential in deeper sediment and both nitrification and denitrification potential in shallower sediment. Since nitrogen cycling is strongly affected by redox conditions, nitrogen cycling in the hyporheic zone of this large-river system likely is affected by dynamics of ground water/surface water interactions that control fluxes of nitrogen and other redox species to hyporheic zone sediment.

Oregon↗

USGS1999

Arsenic in ground water of the Willamette Basin, Oregon

In response to increasing demands on ground-water resources in the Willamette Basin, Oregon (fig. 1), the Oregon Water Resources Department (OWRD) and the U.S. Geological Survey (USGS) began a cooperative study of the basin’s ground-water resources in 1996. This study was designed to increase the current understanding of the ground-water resource, and to better characterize the distribution of naturally occurring poor quality ground water in the basin. Essential components of the study of the physical ground-water resource are the development of a quantitative understanding of regional ground-water availability and flow, and of ground-water/surface-water interactions. Of paramount interest in the characterization of naturally occurring poor-quality ground water in the Willamette Basin is the distribution of arsenic in ground water, the subject of this report. Arsenic contaminates many regional aquifer systems worldwide (Cantor, 1996; Thornton, 1996), and arsenic commonly is detected in ground water of the Willamette Basin at concentrations exceeding the U.S. Environmental Protection Agency (USEPA) current drinking water Maximum Contaminant Level (MCL) of 50 µg/L (micrograms per liter) (U.S. Environmental Protection Agency, 1996). Arsenic is associated with a number of adverse effects on human health. The USEPA considers arsenic to be a human carcinogen (U.S. Environmental Protection Agency, 1996). Examples of other adverse health effects attributed to consumption of arsenic range from weakness and abdominal pain to neurological and cardiovascular problems. A review of health effects associated with consumption of arsenic is given in a report by World Health Organization (1996).

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