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Research about Izembek National Wildlife Refuge

Source-linked reports with geographic coverage including Izembek National Wildlife Refuge.

5 recordsLinked to original sources
USGS2024

Molecular detection and characterization of highly pathogenic H5N1 clade 2.3.4.4b avian influenza viruses among hunter-harvested wild birds provides evidence for three independent introductions into Alaska

We detected and characterized highly pathogenic avian influenza viruses among hunter-harvested wild waterfowl inhabiting western Alaska during September–October 2022 using a molecular sequencing pipeline applied to RNA extracts derived directly from original swab samples. Genomic characterization of 10 H5 clade 2.3.4.4b avian influenza viruses detected with high confidence provided evidence for three independent viral introductions into Alaska. Our results highlight the utility and some potential limits of applying molecular processing approaches directly to RNA extracts from original swab samples for viral research and monitoring.

Alasak↗
USGS2022

Abundance and distribution of eelgrass (Zostera marina) and seaweeds at Izembek National Wildlife Refuge, Alaska, 2007–10

Eelgrass ( Zostera marina ) meadows are expansive along the lower Alaska Peninsula, supporting a rich diversity of marine life, yet little is known about their status and trends in the region. We tested techniques to inventory and monitor trends in the spatial extent and abundance of eelgrass in lagoons of the Izembek National Wildlife Refuge. We determined if Landsat imagery could be used to assess eelgrass spatial extent in shallow (less than 4 meter water depth) coastal waters of the refuge. We determined that this seagrass could be differentiated using Landsat imagery from other cover types (that is, channels and unvegetated tidal flats) with a high degree of accuracy (greater than 80 percent) in Izembek and Kinzarof Lagoons. Eelgrass meadows represented the largest cover type in Izembek (about 16,000 hectares) and Kinzarof (about 900 hectares) Lagoons, comprising between 45 and 50 percent of the spatial extent of these lagoons, respectively. When compared to estimates of spatial extent of eelgrass from previous studies, our results suggest little change in the spatial extent of eelgrass in Izembek Lagoon during the 28-year period 1978 through 2006. Preliminary mapping of eelgrass in other embayments indicated that this seagrass was also expansive in Big Lagoon (about 900 hectares; or 34 percent of the lagoon area) and Hook Bay (about 900 hectares; or 36 percent of the bay area) but not in Cold Bay (about 100 hectares; less than 5 percent of the bay area). We conducted an embayment-wide point sampling technique to assess aboveground biomass and distribution of eelgrass and seaweeds and presence of six macro-invertebrates during a 4-year period (2007–10). We determined that, when present, mean aboveground biomass of eelgrass was greater in Kinzarof Lagoon (182.5 plus or minus 12.1 grams dry weight per square meter) than in Izembek Lagoon (152.1 plus or minus 7.1 grams dry weight per square meter) in 2008–10, possibly reflecting the warmer sea temperatures and higher salinities found on the Gulf of Alaska side of the Alaska Peninsula. Seaweeds were more abundant in Kinzarof Lagoon than in Izembek Lagoon, surpassing aboveground biomass of eelgrass in both lagoons in 2008. Gastropods (4 percent of all points) and Caprella shrimp (25 percent) were the most common of the six macro-invertebrates surveyed in Izembek Lagoon, and Telmessus crab was the most common macro-invertebrate in Kinzarof Lagoon.

Alaska↗
USGS2019

Monitoring annual trends in abundance of eelgrass (Zostera marina) at Izembek National Wildlife Refuge, Alaska, 2018

A lagoon-wide, point-sampling survey of eelgrass ( Zostera marina ) abundance was conducted in Izembek Lagoon, Alaska, August 7–16, 2018, the ninth year of annual surveys (2007–11, 2015–18). Mean predicted aboveground biomass of eelgrass across 116 sampled points was 238 grams per square meter (g m-2) (95 percent confidence interval: 203–278 g m-2) in 2018, an increase of 240 percent from the previous year’s low estimate of 97 g m-2 (95 percent confidence interval: 78–120 g m-2). The increase marked the third year since 2015 where eelgrass biomass was above the long-term mean (158 g m-2). Eelgrass biomass was stable over the 9 years of this survey. A separate (transect) survey for eelgrass abundance at Grant Point-Old Boat Launch showed annual trends in eelgrass biomass similar to the lagoon-wide survey, but over a slightly longer time (2007–18). The estimates of above-average eelgrass biomass in Izembek Lagoon were likely influenced by relatively warm air temperatures and little or no ice in winter (air temperatures 2.7 degrees Celsius greater than the 12-year mean) and average (cool) air temperatures during the growing season (April–August) in 2018.

Alaska↗
USGS2018

Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska

Western Alaska is a potential point-of-entry for foreign-origin influenza A viruses (IAVs) into North America via migratory birds. We sampled waterfowl and gulls for IAVs at Izembek National Wildlife Refuge (NWR) in western Alaska, USA, during late summer and autumn months of 2011–2015, to evaluate the abundance and diversity of viruses at this site. We collected 4842 samples across five years from 25 species of wild birds resulting in the recovery, isolation, and sequencing of 172 IAVs. With the intent of optimizing sampling efficiencies, we used information derived from this multi-year effort to: 1) evaluate from which species we consistently recover viruses, 2) describe viral subtypes of isolates by host species and year, 3) characterize viral gene segment sequence diversity with respect to host species, and assess potential differences in the viral lineages among the host groups, and 4) examine how evidence of intercontinental exchange of IAVs relates to host species. We consistently recovered viruses from dabbling ducks ( Anas spp .), emperor geese ( Chen canagica ) and glaucous-winged gulls ( Larus glaucescens ). There was little evidence for differences in viral subtypes and diversity from different waterfowl hosts, however subtypes and viral diversity varied between waterfowl host groups and glaucous-winged gulls. Furthermore, higher proportions of viral sequences from northern pintails ( Anas acuta ), emperor geese and glaucous-winged gulls were grouped in phylogenetic clades that included IAV sequences originating from wild birds sampled in Asia as compared to non-pintail dabbling ducks, a difference that may be related to intercontinental migratory tendencies of host species. Our summary of research and surveillance efforts at Izembek NWR will assist in future prioritization of which hosts to sample and swab types to collect in Alaska and elsewhere in order to maximize isolate recovery, subtype and sequence diversity for resultant viruses, and detection of evidence for intercontinental viral exchange.

Alaska↗