Geology topics

Research about Idaho

Source-linked reports with geographic coverage including Idaho.

At least 325 records · Page 18Linked to original sources

USGS2014

Evaluation of seepage and discharge uncertainty in the middle Snake River, southwestern Idaho

The U.S. Geological Survey, in cooperation with the State of Idaho, Idaho Power Company, and the Idaho Department of Water Resources, evaluated seasonal seepage gains and losses in selected reaches of the middle Snake River, Idaho, during November 2012 and July 2013, and uncertainty in measured and computed discharge at four Idaho Power Company streamgages. Results from this investigation will be used by resource managers in developing a protocol to calculate and report Adjusted Average Daily Flow at the Idaho Power Company streamgage on the Snake River below Swan Falls Dam, near Murphy, Idaho, which is the measurement point for distributing water to owners of hydropower and minimum flow water rights in the middle Snake River. The evaluated reaches of the Snake River were from King Hill to Murphy, Idaho, for the seepage studies and downstream of Lower Salmon Falls Dam to Murphy, Idaho, for evaluations of discharge uncertainty. Computed seepage was greater than cumulative measurement uncertainty for subreaches along the middle Snake River during November 2012, the non-irrigation season, but not during July 2013, the irrigation season. During the November 2012 seepage study, the subreach between King Hill and C J Strike Dam had a meaningful (greater than cumulative measurement uncertainty) seepage gain of 415 cubic feet per second (ft 3 /s), and the subreach between Loveridge Bridge and C J Strike Dam had a meaningful seepage gain of 217 ft 3 /s. The meaningful seepage gain measured in the November 2012 seepage study was expected on the basis of several small seeps and springs present along the subreach, regional groundwater table contour maps, and results of regional groundwater flow model simulations. Computed seepage along the subreach from C J Strike Dam to Murphy was less than cumulative measurement uncertainty during November 2012 and July 2013; therefore, seepage cannot be quantified with certainty along this subreach. For the uncertainty evaluation, average uncertainty in discharge measurements at the four Idaho Power Company streamgages in the study reach ranged from 4.3 percent (Snake River below Lower Salmon Falls Dam) to 7.8 percent (Snake River below C J Strike Dam) for discharges less than 7,000 ft3/s in water years 2007–11. This range in uncertainty constituted most of the total quantifiable uncertainty in computed discharge, represented by prediction intervals calculated from the discharge rating of each streamgage. Uncertainty in computed discharge in the Snake River below Swan Falls Dam near Murphy was 10.1 and 6.0 percent at the Adjusted Average Daily Flow thresholds of 3,900 and 5,600 ft3/s, respectively. All discharge measurements and records computed at streamgages have some level of uncertainty that cannot be entirely eliminated. Knowledge of uncertainty at the Adjusted Average Daily Flow thresholds is useful for developing a measurement and reporting protocol for purposes of distributing water to hydropower and minimum flow water rights in the middle Snake River.

Idaho↗

USGS2014

Completion summary for boreholes USGS 140 and USGS 141 near the Advanced Test Reactor Complex, Idaho National Laboratory, Idaho

In 2013, the U.S. Geological Survey, in cooperation with the U.S. Department of Energy, drilled and constructed boreholes USGS 140 and USGS 141 for stratigraphic framework analyses and long-term groundwater monitoring of the eastern Snake River Plain aquifer at the Idaho National Laboratory in southeast Idaho. Borehole USGS 140 initially was cored to collect continuous geologic data, and then re-drilled to complete construction as a monitor well. Borehole USGS 141 was drilled and constructed as a monitor well without coring. Boreholes USGS 140 and USGS 141 are separated by about 375 feet (ft) and have similar geologic layers and hydrologic characteristics based on geophysical and aquifer test data collected. The final construction for boreholes USGS 140 and USGS 141 required 6-inch (in.) diameter carbon-steel well casing and 5-in. diameter stainless-steel well screen; the screened monitoring interval was completed about 50 ft into the eastern Snake River Plain aquifer, between 496 and 546 ft below land surface (BLS) at both sites. Following construction and data collection, dedicated pumps and water-level access lines were placed to allow for aquifer testing, for collecting periodic water samples, and for measuring water levels. Borehole USGS 140 was cored continuously, starting from land surface to a depth of 543 ft BLS. Excluding surface sediment, recovery of basalt and sediment core at borehole USGS 140 was about 98 and 65 percent, respectively. Based on visual inspection of core and geophysical data, about 32 basalt flows and 4 sediment layers were collected from borehole USGS 140 between 34 and 543 ft BLS. Basalt texture for borehole USGS 140 generally was described as aphanitic, phaneritic, and porphyritic; rubble zones and flow mold structure also were described in recovered core material. Sediment layers, starting near 163 ft BLS, generally were composed of fine-grained sand and silt with a lesser amount of clay; however, between 223 and 228 ft BLS, silt with gravel was described. Basalt flows generally ranged in thickness from 3 to 76 ft (average of 14 ft) and varied from highly fractured to dense with high to low vesiculation. Geophysical and borehole video logs were collected during certain stages of the drilling and construction process at boreholes USGS 140 and USGS 141. Geophysical logs were examined synergistically with the core material for borehole USGS 140; additionally, geophysical data were examined to confirm geologic and hydrologic similarities between boreholes USGS 140 and USGS 141 because core was not collected for borehole USGS 141. Geophysical data suggest the occurrence of fractured and (or) vesiculated basalt, dense basalt, and sediment layering in both the saturated and unsaturated zones in borehole USGS 141. Omni-directional density measurements were used to assess the completeness of the grout annular seal behind 6-in. diameter well casing. Furthermore, gyroscopic deviation measurements were used to measure horizontal and vertical displacement at all depths in boreholes USGS 140 and USGS 141. Single-well aquifer tests were done following construction at wells USGS 140 and USGS 141 and data examined after the tests were used to provide estimates of specific-capacity, transmissivity, and hydraulic conductivity. The specific capacity, transmissivity, and hydraulic conductivity for well USGS 140 were estimated at 2,370 gallons per minute per foot [(gal/min)/ft)], 4.06 × 105 feet squared per day (ft 2 /d), and 740 feet per day (ft/d), respectively. The specific capacity, transmissivity, and hydraulic conductivity for well USGS 141 were estimated at 470 (gal/min)/ft, 5.95 × 104 ft 2 /d, and 110 ft/d, respectively. Measured flow rates remained relatively constant in well USGS 140 with averages of 23.9 and 23.7 gal/min during the first and second aquifer tests, respectively, and in well USGS 141 with an average of 23.4 gal/min. Water samples were analyzed for cations, anions, metals, nutrients, volatile organic compounds, stable isotopes, and radionuclides. Water samples from both wells indicated that concentrations of tritium, sulfate, and chromium were affected by wastewater disposal practices at the Advanced Test Reactor Complex. Most constituents in water from wells USGS 140 and USGS 141 had concentrations similar to concentrations in well USGS 136, which is upgradient from wells USGS 140 and USGS 141.

Idaho↗

USGS2014

Water-quality and biological conditions in selected tributaries of the Lower Boise River, southwestern Idaho, water years 2009-12

Water-quality conditions were studied in selected tributaries of the lower Boise River during water years 2009–12, including Fivemile and Tenmile Creeks in 2009, Indian Creek in 2010, and Mason Creek in 2011 and 2012. Biological samples, including periphyton biomass and chlorophyll-a, benthic macroinvertebrates, and fish were collected in Mason Creek in October 2011. Synoptic water-quality sampling events were timed to coincide with the beginning and middle of the irrigation season as well as the non-irrigation season, and showed that land uses and irrigation practices affect water quality in the selected tributaries. Large increases in nutrient and sediment concentrations and loads occurred over relatively short stream reaches and affected nutrient and sediment concentrations downstream of those reaches. Escherichia coli (E. coli) values increased in study reaches adjacent to pastured lands or wastewater treatment plants, but increased E. coli values at upstream locations did not necessarily affect E. coli values at downstream locations. A spatial loading analysis identified source areas for nutrients, sediment, and E. coli , and might be useful in selecting locations for water-quality improvement projects. Effluent from wastewater treatment plants increased nutrient loads in specific reaches in Fivemile and Indian Creeks. Increased suspended-sediment loads were associated with increased discharge from irrigation returns in each of the studied tributaries. Samples collected during or shortly after storms showed that surface runoff, particularly during the winter, may be an important source of nutrients in tributary watersheds with substantial agricultural land use. Concentrations of total phosphorus, suspended sediment, and E. coli exceeded regulatory water-quality targets or trigger levels at one or more monitoring sites in each tributary studied, and exceedences occurred during irrigation season more often than during non-irrigation season. As with water-quality sampling results, bottom-sediment samples analyzed for contaminants of emerging concern indicated that adjacent land uses can affect in-stream conditions. Contaminants of emerging concern were detected in four categories: urban compounds, industrial compounds, fecal steroids, and personal care products. Compounds in one or more of the four contaminant categories were detected at higher concentrations in upstream sites than in downstream sites in the tributaries and in the lower Boise River. High concentrations of compounds in upstream locations indicated that adjacent land use might be an important factor in contributing contaminants of emerging concern to the lower Boise River watershed. Expanded monitoring at Mason Creek near the mouth included a streamgage, a continuous water-quality monitor, and monthly water-quality sample collection. Data collected during expanded monitoring efforts at Mason Creek near the mouth provided information to develop and compare water-quality models. Regression models were developed using turbidity, discharge, and seasonality as surrogates to estimate concentrations of water-quality constituents. Daily streamflow also was used in a load model to estimate daily loads of water-quality constituents. Surrogate regression models may be useful for long-term monitoring and generally performed better than other models to estimate concentrations and loads of total phosphorus, total nitrogen, and suspended sediment in Mason Creek. Biological sampling results from Mason Creek showed low periphyton biomass and chlorophyll-a concentrations compared to those historically measured in the Boise River near Parma, Idaho, during October and November. The most abundant invertebrate found in Mason Creek was the highly tolerant and invasive New Zealand mudsnail ( Potamopyrgus antipodarum ). The presence of small rainbow trout (90 millimeters) may indicate salmonid spawning in Mason Creek. The rangeland-fish-index score of 58 for Mason Creek is comparable to rangeland-fish-index scores calculated for the Boise River near Middleton, indicating intermediate biotic condition.

Idaho↗

USGS2014

Streamflow statistics for development of water rights claims for the Jarbidge Wild and Scenic River, Owyhee Canyonlands Wilderness, Idaho, 2013-14: a supplement to Scientific Investigations Report 2013-5212

The U.S. Geological Survey (USGS), in cooperation with the Bureau of Land Management (BLM), estimated streamflow statistics for stream segments designated “Wild,” “Scenic,” or “Recreational” under the National Wild and Scenic Rivers System in the Owyhee Canyonlands Wilderness in southwestern Idaho. The streamflow statistics were used by the BLM to develop and file a draft, federal reserved water right claim to protect federally designated “outstanding remarkable values” in the Jarbidge River. The BLM determined that the daily mean streamflow equaled or exceeded 20, 50, and 80 percent of the time during bimonthly periods (two periods per month) and the bankfull (66.7-percent annual exceedance probability) streamflow are important thresholds for maintaining outstanding remarkable values. Although streamflow statistics for the Jarbidge River below Jarbidge, Nevada (USGS 13162225) were published previously in 2013 and used for the draft water right claim, the BLM and USGS have since recognized the need to refine streamflow statistics given the approximate 40 river mile distance and intervening tributaries between the original point of estimation (USGS 13162225) and at the mouth of the Jarbidge River, which is the downstream end of the Wild and Scenic River segment. A drainage-area-ratio method was used in 2013 to estimate bimonthly exceedance probability streamflow statistics at the mouth of the Jarbidge River based on available streamgage data on the Jarbidge and East Fork Jarbidge Rivers. The resulting bimonthly streamflow statistics were further adjusted using a scaling factor calculated from a water balance on streamflow statistics calculated for the Bruneau and East Fork Bruneau Rivers and Sheep Creek. The final, adjusted bimonthly exceedance probability and bankfull streamflow statistics compared well with available verification datasets (including discrete streamflow measurements made at the mouth of the Jarbidge River) and are considered the best available estimates for streamflow statistics in the Jarbidge Wild and Scenic River segment.

Idaho↗

USGS2014

Stream seepage and groundwater levels, Wood River Valley, south-central Idaho, 2012-13

Stream discharge and water levels in wells were measured at multiple sites in the Wood River Valley, south-central Idaho, in August 2012, October 2012, and March 2013, as a component of data collection for a groundwater-flow model of the Wood River Valley aquifer system. This model is a cooperative and collaborative effort between the U.S. Geological Survey and the Idaho Department of Water Resources. Stream-discharge measurements for determination of seepage were made during several days on three occasions: August 27–28, 2012, October 22–24, 2012, and March 27–28, 2013. Discharge measurements were made at 49 sites in August and October, and 51 sites in March, on the Big Wood River, Silver Creek, their tributaries, and nearby canals. The Big Wood River generally gains flow between the Big Wood River near Ketchum streamgage (13135500) and the Big Wood River at Hailey streamgage (13139510), and loses flow between the Hailey streamgage and the Big Wood River at Stanton Crossing near Bellevue streamgage (13140800). Shorter reaches within these segments may differ in the direction or magnitude of seepage or may be indeterminate because of measurement uncertainty. Additional reaches were measured on Silver Creek, the North Fork Big Wood River, Warm Springs Creek, Trail Creek, and the East Fork Big Wood River. Discharge measurements also were made on the Hiawatha, Cove, District 45, Glendale, and Bypass Canals, and smaller tributaries to the Big Wood River and Silver Creek. Water levels in 93 wells completed in the Wood River Valley aquifer system were measured during October 22–24, 2012; these wells are part of a network established by the U.S. Geological Survey in 2006. Maps of the October 2012 water-table altitude in the unconfined aquifer and the potentiometric-surface altitude of the confined aquifer have similar topology to those on maps of October 2006 conditions. Between October 2006 and October 2012, water-table altitude in the unconfined aquifer rose by as much as 1.86 feet in 6 wells and declined by as much as 14.28 feet in 77 wells; average decline was 2.9 feet. A map of changes in the water‑table altitude of the unconfined aquifer shows that the largest declines were in tributary canyons and in an area roughly between Baseline and Glendale Roads. From October 2006 to October 2012, the potentiometric-surface altitude in 10 wells completed in the confined aquifer declined between 0.12 and 20.50 feet; average decline was 6.8 feet. A map of changes in the potentiometric-surface altitude of the confined aquifer shows that the largest declines were in the southwestern part of the Bellevue fan. Reduced precipitation prior to the October 2012 water-level measurements likely is partially responsible for 2006–12 water-table declines in the unconfined aquifer; the relative contribution of precipitation deficit and groundwater withdrawals to the declines is not known. Although the confined aquifer may not receive direct recharge from precipitation or streams, groundwater withdrawal from the confined aquifer induces flow from the unconfined aquifer. Declines in the confined aquifer are likely due to groundwater withdrawals and declines in the water table of the unconfined aquifer. A statistical analysis of five long-term monitoring wells (three completed in the unconfined aquifer, one in the confined aquifer, and one outside the aquifer system boundary) showed statistically significant declining trends in four wells.

Idaho↗

USGS2014

Sources, transport, and trends for selected trace metals and nutrients in the Coeur d'Alene and Spokane River Basins, Idaho, 1990-2013

Data collected at 18 streamflow-gaging and water-quality sampling sites in the Coeur d’Alene and Spokane River Basins of northern Idaho were used to estimate mean streamflow‑weighted concentrations and annual loads of total and dissolved cadmium, lead, and zinc, and total phosphorus (TP) and nitrogen (TN) for water years (WYs) 2009–13. Chronic Ambient Water Quality Criteria (AWQC) and AWQC ratios also were calculated to evaluate Idaho aquatic life criteria for chronic exposure to cadmium and zinc in streams. At four sites with a longer period of record, a Seasonal Kendall trend test was used to assess historical trends in the concentrations of total cadmium, lead, and zinc, and chronic AWQC ratios for cadmium and zinc during WYs 1990–2013. Concentrations of dissolved and total cadmium, lead, and zinc varied widely both at and among sites. At most sites, dissolved cadmium and zinc constituted most of the total concentrations; dissolved lead generally constituted less than 10 percent of the total lead concentration. Trace metal concentrations increased by 2 to 4 orders of magnitude along the South Fork Coeur d’Alene River (SFCDR) from near Mullan (site 2) downstream to near Pinehurst (site 13). The mean streamflow-weighted concentrations of total cadmium, lead, and zinc in the SFCDR near Pinehurst for WYs 2009–13 were 3.71, 61.4, and 514 micrograms per liter (μg/L), respectively. In the Coeur d’Alene River (CDR) near Harrison (site 15), downstream of the confluence of the metal-enriched SFCDR and the relatively dilute North Fork Coeur d’Alene River (NFCDR), the mean streamflow-weighted concentrations of total cadmium, lead, and zinc were 1.58, 125, and 236 μg/L, respectively. Trace‑metal concentrations were smaller in the Spokane River than in the CDR because of dilution and retention of trace metals in Coeur d’Alene Lake. The mean streamflow-weighted concentrations of total cadmium, lead, and zinc in the Spokane River near Post Falls (site 18) were 0.231, 2.91, and 48.9 μg/L, respectively. AWQC ratios indicate that cadmium and zinc concentrations met the chronic criteria (ratio of less than 1.0) for the protection of aquatic life at only three sites: the NFCDR at Enaville (site 1), the upper SFCDR near Mullan (site 2), and the St. Joe River near St. Maries (site 16). Cadmium and zinc concentrations at sites on the Spokane River (sites 17 and 18) generally were close to the chronic AWQC values. The sites with the largest chronic AWQC ratios in the Coeur d’Alene and Spokane River Basins for both cadmium and zinc were in the Canyon and Ninemile Creek basins (sites 3–6). Concentrations of TP and TN generally were low along the SFCDR downstream to Kellogg. From the SFCDR near Kellogg (site 9) downstream to the SFCDR above Pine Creek (site 11), the mean streamflow-weighted concentration of the nutrients TP and TN increased by 0.036 milligram per liter (mg/L) (200 percent) and 0.124 mg/L (78 percent), respectively. The increases in nutrient concentrations along the SFCDR likely are in response to discharge from wastewater‑treatment facilities. Mean streamflow-weighted concentrations for TP and TN (0.054 and 0.284 mg/L, respectively) were the highest in the sampling network in the SFCDR above Pine Creek (site 11). LOADEST modeling was used to relate mass transport, or load, of trace metals and nutrients to variations in streamflow and time. Results indicate that most of the cadmium and zinc load in the Coeur d’Alene and Spokane Rivers is derived from the SFCDR, and that most of the lead load is derived from the Coeur d’Alene River downstream of the confluence of the NFCDR and SFCDR. Major tributary sources of trace metals to the SFCDR are Canyon Creek and Ninemile Creek. Combined, these two tributaries contributed estimated mean loads of about 0.575 ton per year (ton/yr) of total cadmium, 5.29 ton/yr of total lead, and 90.9 ton/yr of total zinc to the SFCDR during WYs 2009–13. Groundwater discharge and tributaries near the Central Impoundment Area between SFCDR near Kellogg (site 9) and SFCDR near Smelterville (site 10) were other primary sources of cadmium and zinc. Combined, these sources contributed an estimated 1.39 ton/yr of total cadmium and 143 ton/yr of total zinc to the SFCDR during WYs 2009–13. Erosion and transport of sediment-bound lead contained in the CDR flood plain and on the river bottom between Cataldo (site 14) and Harrison (site 15) were the primary source of lead. During WYs 2009–13, the mean load of trace metals delivered to Coeur d’Alene Lake included about 4.66 ton/yr of total cadmium, 398 ton/yr of total lead, and 698 ton/yr of total zinc. About 99 percent of the trace-metal load to the lake was from the CDR as measured near site 15 at Harrison. During WYs 2009–13, about 1.48 ton/yr of cadmium, 18 ton/yr of lead, and 350 ton/yr of zinc were transported from Coeur d’Alene Lake into the Spokane River as measured at the lake outlet (site 17). During WYs 2009–13, the loads of TP and TN delivered from the Coeur d’Alene and St. Joe Rivers to Coeur d’Alene Lake were about equivalent. On average, the CDR transported about 93.6 tons of TP and 369 tons of TN, and the St. Joe River transported about 92.9 tons of TP and 360 tons of TN to the lake during 2009–13. About 52.9 ton/yr of TP and 628 ton/yr of TN were transported from Coeur d’Alene Lake to the Spokane River during WYs 2009–13. Results from Seasonal Kendall trend tests indicate statistically significant downward temporal trends during WYs 1990–2013 for total cadmium, lead, zinc, and chronic AWQC ratios of cadmium and zinc in the SFCDR at Elizabeth Park (site 8) and near Pinehurst (site 13), and in the CDR near Harrison (site 15). Statistically significant downward temporal trends for total lead, zinc, and the chronic AWQC ratio of zinc also occurred in the Spokane River near Post Falls (site 18) during WYs 1991–2013. Seasonal Kendall trend tests for WYs 2003–13 indicated statistically significant downward trends for total cadmium, zinc, and chronic AWQC ratios of cadmium and zinc in the SFCDR at Elizabeth Park (site 8). The Spokane River near Post Falls (site 18) had a statistically significant downward trend for total zinc during WYs 2003–13, and a significant upward trend for the chronic AWQC ratio of cadmium. No significant trends were found in trace-metal concentrations or chronic AWQC ratios in the SFCDR near Pinehurst (site 13) and the CDR near Harrison (site 15) during WYs 2003–13. Results from this study indicate that remedial activities conducted since the 1990s have been successful in reducing the concentrations and loads of trace metals in streams and rivers in the Coeur d’Alene and Spokane River Basins. Soils, sediment, surface water, and groundwater in areas of the Coeur d’Alene and Spokane River Basins are contaminated, and the hydrological relations between these media are complex and difficult to characterize. Trace metals have variable source areas, are transported differently depending on hydrologic conditions, and behave differently in response to remedial activities in upstream basins. Based on these findings, no single remedial action would be completely effective in reducing all trace metals to nontoxic concentrations throughout the Coeur d’Alene and Spokane River Basins. Instead, unique cleanup activities targeted at specific media and specific source areas may be necessary to achieve long-term water-quality goals.

Idaho↗

USGS2014

Measurement of unsaturated hydraulic properties and evaluation of property-transfer models for deep sedimentary interbeds, Idaho National Laboratory, Idaho

Operations at the Idaho National Laboratory (INL) have the potential to contaminate the underlying Eastern Snake River Plain (ESRP) aquifer. Methods to quantitatively characterize unsaturated flow and recharge to the ESRP aquifer are needed to inform water-resources management decisions at INL. In particular, hydraulic properties are needed to parameterize distributed hydrologic models of unsaturated flow and transport at INL, but these properties are often difficult and costly to obtain for large areas. The unsaturated zone overlying the ESRP aquifer consists of alternating sequences of thick fractured volcanic rocks that can rapidly transmit water flow and thinner sedimentary interbeds that transmit water much more slowly. Consequently, the sedimentary interbeds are of considerable interest because they primarily restrict the vertical movement of water through the unsaturated zone. Previous efforts by the U.S. Geological Survey (USGS) have included extensive laboratory characterization of the sedimentary interbeds and regression analyses to develop property-transfer models, which relate readily available physical properties of the sedimentary interbeds (bulk density, median particle diameter, and uniformity coefficient) to water retention and unsaturated hydraulic conductivity curves. During 2013–14, the USGS, in cooperation with the U.S. Department of Energy, focused on further characterization of the sedimentary interbeds below the future site of the proposed Remote Handled Low-Level Waste (RHLLW) facility, which is intended for the long-term storage of low-level radioactive waste. Twelve core samples from the sedimentary interbeds from a borehole near the proposed facility were collected for laboratory analysis of hydraulic properties, which also allowed further testing of the property-transfer modeling approach. For each core sample, the steady-state centrifuge method was used to measure relations between matric potential, saturation, and conductivity. These laboratory measurements were compared to water-retention and unsaturated hydraulic conductivity parameters estimated using the established property-transfer models. For each core sample obtained, the agreement between measured and estimated hydraulic parameters was evaluated quantitatively using the Pearson correlation coefficient (r). The highest correlation is for saturated hydraulic conductivity ( K sat ) with an r value of 0.922. The saturated water content (q sat ) also exhibits a strong linear correlation with an r value of 0.892. The curve shape parameter (λ) has a value of 0.731, whereas the curve scaling parameter (y o ) has the lowest r value of 0.528. The r values demonstrate that model predictions correspond well to the laboratory measured properties for most parameters, which supports the value of extending this approach for quantifying unsaturated hydraulic properties at various sites throughout INL.

Idaho↗

USGS2013

Ambient changes in tracer concentrations from a multilevel monitoring system in Basalt

Starting in 2008, a 4-year tracer study was conducted to evaluate ambient changes in groundwater concentrations of a 1,3,6-naphthalene trisulfonate tracer that was added to drill water. Samples were collected under open borehole conditions and after installing a multilevel groundwater monitoring system completed with 11 discrete monitoring zones within dense and fractured basalt and sediment layers in the eastern Snake River aquifer. The study was done in cooperation with the U.S. Department of Energy to test whether ambient fracture flow conditions were sufficient to remove the effects of injected drill water prior to sample collection. Results from thief samples indicated that the tracer was present in minor concentrations 28 days after coring, but was not present 6 months after coring or 7 days after reaming the borehole. Results from sampling the multilevel monitoring system indicated that small concentrations of the tracer remained in 5 of 10 zones during some period after installation. All concentrations were several orders of magnitude lower than the initial concentrations in the drill water. The ports that had remnant concentrations of the tracer were either located near sediment layers or were located in dense basalt, which suggests limited groundwater flow near these ports. The ports completed in well-fractured and vesicular basalt had no detectable concentrations.

Idaho↗

USGS2013

Creel survey sampling designs for estimating effort in short-duration Chinook salmon fisheries

Chinook Salmon Oncorhynchus tshawytscha sport fisheries in the Columbia River basin are commonly monitored using roving creel survey designs and require precise, unbiased catch estimates. The objective of this study was to examine the relative bias and precision of total catch estimates using various sampling designs to estimate angling effort under the assumption that mean catch rate was known. We obtained information on angling populations based on direct visual observations of portions of Chinook Salmon fisheries in three Idaho river systems over a 23-d period. Based on the angling population, Monte Carlo simulations were used to evaluate the properties of effort and catch estimates for each sampling design. All sampling designs evaluated were relatively unbiased. Systematic random sampling (SYS) resulted in the most precise estimates. The SYS and simple random sampling designs had mean square error (MSE) estimates that were generally half of those observed with cluster sampling designs. The SYS design was more efficient (i.e., higher accuracy per unit cost) than a two-cluster design. Increasing the number of clusters available for sampling within a day decreased the MSE of estimates of daily angling effort, but the MSE of total catch estimates was variable depending on the fishery. The results of our simulations provide guidelines on the relative influence of sample sizes and sampling designs on parameters of interest in short-duration Chinook Salmon fisheries.

Idaho↗

USGS2013

Lidar-derived estimate and uncertainty of carbon sink in successional phases of woody encroachment

Woody encroachment is a globally occurring phenomenon that contributes to the global carbon sink. The magnitude of this contribution needs to be estimated at regional and local scales to address uncertainties present in the global- and continental-scale estimates, and guide regional policy and management in balancing restoration activities, including removal of woody plants, with greenhouse gas mitigation goals. The objective of this study was to estimate carbon stored in various successional phases of woody encroachment. Using lidar measurements of individual trees, we present high-resolution estimates of aboveground carbon storage in juniper woodlands. Segmentation analysis of lidar point cloud data identified a total of 60,628 juniper tree crowns across four watersheds. Tree heights, canopy cover, and density derived from lidar were strongly correlated with field measurements of 2613 juniper stems measured in 85 plots (30 × 30 m). Aboveground total biomass of individual trees was estimated using a regression model with lidar-derived height and crown area as predictors (Adj. R 2 = 0.76, p < 0.001, RMSE = 0.58 kg). The predicted mean aboveground woody carbon storage for the study area was 677 g/m 2 . Uncertainty in carbon storage estimates was examined with a Monte Carlo approach that addressed major error sources. Ranges predicted with uncertainty analysis in the mean, individual tree, aboveground woody C, and associated standard deviation were 0.35 – 143.6 kg and 0.5 – 1.25 kg, respectively. Later successional phases of woody encroachment had, on average, twice the aboveground carbon relative to earlier phases. Woody encroachment might be more successfully managed and balanced with carbon storage goals by identifying priority areas in earlier phases of encroachment where intensive treatments are most effective.

Idaho↗

USGS2013

Ore genesis constraints on the Idaho cobalt belt from fluid inclusion gas, noble gas isotope, and ion ratio analyses--a reply

Burlinson (2013) questions the veracity of the H 2 concentrations reported for fluid inclusion extracts from minerals in the Idaho cobalt belt (Table 2; Landis and Hofstra, 2012) and suggests that they are an analytical artifact of electron-impact mass spectrometry. He also declares that H 2 should not be present in fluid inclusions because it is invariably lost by diffusion and is never detected in fluid inclusions by laser Raman. We welcome this opportunity to reply and maintain that the reported H 2 contents are accurate. Below we explain why Burlinson’s criticisms are invalid.

Idaho↗

USGS2013

Woodland dynamics at the northern range periphery: A challenge for protected area management in a changing world

Managers of protected natural areas increasingly are confronted with novel ecological conditions and conflicting objectives to preserve the past while fostering resilience for an uncertain future. This dilemma may be pronounced at range peripheries where rates of change are accelerated and ongoing invasions often are perceived as threats to local ecosystems. We provide an example from City of Rocks National Reserve (CIRO) in southern Idaho, positioned at the northern range periphery of pinyon-juniper (P-J) woodland. Reserve managers are concerned about P-J woodland encroachment into adjacent sagebrush steppe, but the rates and biophysical variability of encroachment are not well documented and management options are not well understood. We quantified the rate and extent of woodland change between 1950 and 2009 based on a random sample of aerial photo interpretation plots distributed across biophysical gradients. Our study revealed that woodland cover remained at approximately 20% of the study area over the 59-year period. In the absence of disturbance, P-J woodlands exhibited the highest rate of increase among vegetation types at 0.37% yr −1 . Overall, late-successional P-J stands increased in area by over 100% through the process of densification (infilling). However, wildfires during the period resulted in a net decrease of woody evergreen vegetation, particularly among early and mid-successional P-J stands. Elevated wildfire risk associated with expanding novel annual grasslands and drought is likely to continue to be a fundamental driver of change in CIRO woodlands. Because P-J woodlands contribute to regional biodiversity and may contract at trailing edges with global warming, CIRO may become important to P-J woodland conservation in the future. Our study provides a widely applicable toolset for assessing woodland ecotone dynamics that can help managers reconcile the competing demands to maintain historical fidelity and contribute meaningfully to the U.S. protected area network in a future with novel, no-analog ecosystems.

Idaho↗

USGS2013

Use of exposure history to identify patterns of immunity to pneumonia in bighorn sheep (Ovis canadensis)

Individual host immune responses to infectious agents drive epidemic behavior and are therefore central to understanding and controlling infectious diseases. However, important features of individual immune responses, such as the strength and longevity of immunity, can be challenging to characterize, particularly if they cannot be replicated or controlled in captive environments. Our research on bighorn sheep pneumonia elucidates how individual bighorn sheep respond to infection with pneumonia pathogens by examining the relationship between exposure history and survival in situ. Pneumonia is a poorly understood disease that has impeded the recovery of bighorn sheep (Ovis canadensis) following their widespread extirpation in the 1900s. We analyzed the effects of pneumonia-exposure history on survival of 388 radio-collared adults and 753 ewe-lamb pairs. Results from Cox proportional hazards models suggested that surviving ewes develop protective immunity after exposure, but previous exposure in ewes does not protect their lambs during pneumonia outbreaks. Paradoxically, multiple exposures of ewes to pneumonia were associated with diminished survival of their offspring during pneumonia outbreaks. Although there was support for waning and boosting immunity in ewes, models with consistent immunizing exposure were similarly supported. Translocated animals that had not previously been exposed were more likely to die of pneumonia than residents. These results suggest that pneumonia in bighorn sheep can lead to aging populations of immune adults with limited recruitment. Recovery is unlikely to be enhanced by translocating nai¨ve healthy animals into or near populations infected with pneumonia pathogens.

Idaho↗

USGS2013

Characterizing the thermal suitability of instream habitat for salmonids: A cautionary example from the Rocky Mountains

Understanding a species’ thermal niche is becoming increasingly important for management and conservation within the context of global climate change, yet there have been surprisingly few efforts to compare assessments of a species’ thermal niche across methods. To address this uncertainty, we evaluated the differences in model performance and interpretations of a species’ thermal niche when using different measures of stream temperature and surrogates for stream temperature. Specifically, we used a logistic regression modeling framework with three different indicators of stream thermal conditions (elevation, air temperature, and stream temperature) referenced to a common set of Brook Trout Salvelinus fontinalis distribution data from the Boise River basin, Idaho. We hypothesized that stream temperature predictions that were contemporaneous with fish distribution data would have stronger predictive performance than composite measures of stream temperature or any surrogates for stream temperature. Across the different indicators of thermal conditions, the highest measure of accuracy was found for the model based on stream temperature predictions that were contemporaneous with fish distribution data (percent correctly classified = 71%). We found considerable differences in inferences across models, with up to 43% disagreement in the amount of stream habitat that was predicted to be suitable. The differences in performance between models support the growing efforts in many areas to develop accurate stream temperature models for investigations of species’ thermal niches.

Idaho↗

USGS2013

Wind erosion from a sagebrush steppe burned by wildfire: measurements of PM 10 and total horizontal sediment flux

Wind erosion and aeolian transport processes are under studied compared to rainfall-induced erosion and sediment transport on burned landscapes. Post-ﬁre wind erosion studies have predominantly focused on near-surface sediment transport and associated impacts such as on-site soil loss and site fertility. Downwind impacts, including air quality degradation and deposition of dust or contaminants, are also likely post-ﬁre effects; however, quantitative ﬁeld measurements of post-ﬁre dust emissions are needed for assessment of these downwind risks. A wind erosion monitoring system was installed immediately following a desert sagebrush and grass wildﬁre in southeastern Idaho, USA to measure wind erosion from the burned landscape. This paper presents measurements of horizontal sediment ﬂux and PM 10 vertical ﬂux from the burned area. We determined threshold wind speeds and corresponding threshold friction velocities to be 6.0 and 20 m s -1 , respectively, for the 4 months immediately following the ﬁre and 10 and 0.55 m s -1 for the following spring months. Several major wind erosion events were measured in the months following the July 2010 Jefferson Fire. The largest wind erosion event occurred in early September 2010 and produced 1495 kg m -1 of horizontal sediment transport within the ﬁrst 2 m above the soil surface, had a maximum PM 10 vertical ﬂux of 100 mg m -2 s -1 , and generated a large dust plume that was visible in satellite imagery. The peak PM 10 concentration measured on-site at a height of 2 m in the downwind portion of the burned area was 690 mg m -3 . Our results indicate that wildﬁre can convert a relatively stable landscape into one that is a major dust source.

Idaho↗

USGS2013

Crustal-scale recycling in caldera complexes and rift zones along the Yellowstone hotspot track: O and Hf isotopic evidence in diverse zircons from voluminous rhyolites of the Picabo volcanic field, Idaho

Rhyolites of the Picabo volcanic field (10.4–6.6 Ma) in eastern Idaho are preserved as thick ignimbrites and lavas along the margins of the Snake River Plain (SRP), and within a deep (>3 km) borehole near the central axis of the Yellowstone hotspot track. In this study we present new O and Hf isotope data and U–Pb geochronology for individual zircons, O isotope data for major phenocrysts (quartz, plagioclase, and pyroxene), whole rock Sr and Nd isotope ratios, and whole rock geochemistry for a suite of Picabo rhyolites. We synthesize our new datasets with published Ar–Ar geochronology to establish the eruptive framework of the Picabo volcanic field, and interpret its petrogenetic history in the context of other well-studied caldera complexes in the SRP. Caldera complex evolution at Picabo began with eruption of the 10.44±0.27 Ma (U–Pb) Tuff of Arbon Valley (TAV), a chemically zoned and normal-δ 18 O (δ 18 O magma=7.9‰) unit with high, zoned 87 Sr/ 86 Sr i (0.71488–0.72520), and low-ε Nd (0) (−18) and ε Hf (0) (−28). The TAV and an associated post caldera lava flow possess the lowest ε Nd (0) (−23), indicating ∼40–60% derivation from the Archean upper crust. Normal-δ 18 O rhyolites were followed by a series of lower-δ 18 O eruptions with more typical (lower crustal) Sr–Nd–Hf isotope ratios and whole rock chemistry. The voluminous 8.25±0.26 Ma West Pocatello rhyolite has the lowest δ 18 O value (δ 18 O melt =3.3‰), and we correlate it to a 1,000 m thick intracaldera tuff present in the INEL-1 borehole (with published zircon ages 8.04–8.35 Ma, and similarly low-δ 18 O zircon values). The significant (4–5‰) decrease in magmatic-δ 18 O values in Picabo rhyolites is accompanied by an increase in zircon δ 18 O heterogeneity from ∼1‰ variation in the TAV to >5‰ variation in the late-stage low-δ 18 O rhyolites, a trend similar to what is characteristic of Heise and Yellowstone, and which indicates remelting of variably hydrothermally altered tuffs followed by rapid batch assembly prior to eruption. However, due to the greater abundance of low-δ 18 O rhyolites at Picabo, the eruptive framework may reflect an intertwined history of caldera collapse and coeval Basin and Range rifting and hydrothermal alteration. We speculate that the source rocks with pre-existing low-δ 18 O alteration may be related to: (1) deeply buried and unexposed older deposits of Picabo-age or Twin Falls-age low-δ 18 O volcanics; and/or (2) regionally-abundant late Eocene Challis volcanics, which were hydrothermally altered near the surface prior to or during peak Picabo magmatism. Basin and Range extension, specifically the formation of metamorphic core complexes exposed in the region, could have facilitated the generation of low-δ 18 O magmas by exhuming heated rocks and creating the large water-rock ratios necessary for shallow hydrothermal alteration of tectonically (rift zones) and volcanically (calderas) buried volcanic rocks. These interpretations highlight the major processes by which supereruptive volumes of magma are generated in the SRP, mechanisms applicable to producing rhyolites worldwide that are facilitated by plume driven volcanism and extensional tectonics.

Idaho↗

USGS2013

Salmon-mediated nutrient flux in selected streams of the Columbia River basin, USA

Salmon provide an important resource subsidy and linkage between marine and land-based ecosystems. This flow of energy and nutrients is not uni-directional (i.e., upstream only); in addition to passive nutrient export via stream flow, juvenile emigrants actively export nutrients from freshwater environments. In some cases, nutrient export can exceed import. We evaluated nutrient fluxes in streams across central Idaho, USA using Chinook salmon (Oncorhynchus tshawytscha) adult escapement and juvenile production data from 1998 to 2008. We found in the majority of stream-years evaluated, adults imported more nutrients than progeny exported; however, in 3% of the years, juveniles exported more nutrients than their parents imported. On average, juvenile emigrants exported 22 ± 3% of the nitrogen and 30 ± 4% of the phosphorus their parents imported. This relationship was density dependent and nonlinear; during periods of low adult abundance juveniles were larger and exported up to 194% and 268% of parental nitrogen and phosphorus inputs, respectively. We highlight minimum escapement thresholds that appear to 1) maintain consistently positive net nutrient flux and 2) reduce the average proportional rate of export across study streams. Our results suggest a state-shift occurs when adult spawner abundance falls below a threshold to a point where the probability of juvenile nutrient exports exceeding adult imports becomes increasingly likely.

Idaho↗

USGS2013

Bathymetric surveys of the Kootenai River near Bonners Ferry, Idaho, water year 2011

In 2009, the Kootenai Tribe of Idaho released and implemented the Kootenai River Habitat Restoration Master Plan. This plan aimed to restore, enhance, and maintain the Kootenai River habitat and landscape to support and sustain habitat conditions for aquatic species and animal populations. In support of these restoration efforts, the U.S. Geological Survey, in cooperation with the Kootenai Tribe of Idaho, conducted high-resolution multibeam echosounder bathymetric surveys in May, June, and July 2011, as a baseline bathymetric monitoring survey on the Kootenai River near Bonners Ferry, Idaho. Three channel patterns or reaches exist in the study area—braided, meander, and a transitional zone connecting the braided and meander reaches. Bathymetric data were collected at three study areas in 2011 to provide: (1) surveys in unmapped portions of the meander reach; (2) monitoring of the presence and extent of sand along planned lines within a section of the meander reach; and (3) monitoring aggradation and degradation of the channel bed at specific cross sections within the braided reach and transitional zone. The bathymetric data will be used to update and verify flow models, calibrate and verify sediment transport modeling efforts, and aid in the biological assessment in support of the Kootenai River Habitat Restoration Master Plan. The data and planned lines for each study reach were produced in ASCII XYZ format supported by most geospatial software.

Idaho↗