Geology topics

Timothy P. O’Brien

Publications and source records attributed to Timothy P. O’Brien.

At least 19 recordsLinked to original sources

USGS2026

Availability of dark daytime refuge may limit mysid abundance in the Laurentian Great Lakes

The zooplankton Mysis diluviana is a major component of the Laurentian Great Lakes food web and has recently declined in abundance in both lakes Michigan and Huron. Drivers of these declines are not well understood. Here, we explore the hypothesis that recent increases in water clarity have contributed to the decline of M. diluviana (mysids) by limiting the availability of daytime dark refuge from visual predators. Using Secchi depth data from 1996 to 2021, we estimate that dark refuge has decreased substantially in lakes Michigan and Huron where mysids have declined, but dark refuge has remained more stable in lakes Ontario and Superior where mysid populations did not decline. Results from a 2021 uncrewed surface vessel hydroacoustic survey and lake-wide, net-based sampling in lakes Michigan and Huron revealed significantly more mysids in areas with dark refuge, such as Lake Michigan’s northern basin. Conversely, Lake Huron contains sparse dark refuge consistent with low mysid densities in that lake. Higher water clarity leading to increased predation may be a primary driver of mysid declines in the Great Lakes.

Laurentian Great Lakes↗

USGS2026

Evaluating the use of uncrewed surface vessels to enhance Lake Erie acoustic prey-fish surveys

Incorporation of autonomous uncrewed surface vessels (USVs) into large-scale acoustic surveys may enhance spatiotemporal extent and quality of fish density estimates. Lake Erie is currently surveyed by three motorized research vessels (RVs), which annually collect acoustic data and estimate prey-fish abundances. To evaluate the feasibility of incorporating a USV into the existing survey to increase spatial coverage, we compared paired acoustic measurements of target strength (TS), area backscattering coefficient (ABC), and areal fish density from four motorized RVs (three currently and one historically used) and one USV (Saildrone Explorer). Acoustic data were collected along 2-km transects during five sampling events distributed throughout Lake Erie. Despite observing event-specific differences that were likely impacted by sampling conditions, survey-level estimates of areal density between RVs and the USV were comparable (i.e., RV 6% lower than USV). RVs and the USV appear to react differently (speed and stability) to variable environmental conditions (wind and waves), which impacted data quality and must be mitigated in future applications. However, similar to previous comparisons in marine and freshwater environments, incorporating a USV into an acoustic survey could enhance annual fish density estimates by increasing effort, spatial coverage, logistical flexibility, and biological data collection opportunities from RVs.

Michigan, New York, Ohio, Pennsylvania↗

USGS2026

Status and trends of pelagic and benthic prey fish populations in Lake Michigan, 2025

Fall bottom trawl (fall BT) and lakewide acoustic (AC) surveys are conducted annually to generate indices of pelagic and benthic prey fish densities in Lake Michigan. The fall BT survey has been conducted each fall since 1973 using 12-m trawls at depths ranging from 9 to 110 m at fixed locations distributed across seven transects; this survey estimates densities of seven prey fish species [i.e., Alewife ( Alosa pseudoharengus ), Bloater ( Coregonus hoyi ), Rainbow Smelt ( Osmerus mordax ), Deepwater Sculpin ( Myoxocephalus thompsonii ), Slimy Sculpin ( Cottus cognatus ), Round Goby ( Neogobius melanostomus ), Ninespine Stickleback ( Pungitius pungitius )]. The AC survey has been conducted each late summer/early fall since 2004 (except 2020). The 2025 AC survey consisted of 26 transects [470 km total (292 miles)] covering bottom depths ranging from 5 to 259 m and 44 midwater trawl tows at 1.4 to 82.4 m fishing depth; this survey estimates densities of three prey fish species (i.e., Alewife, Bloater, and Rainbow Smelt). The data generated from these surveys are used to estimate various population parameters that are, in turn, used by state and tribal agencies in managing Lake Michigan fish stocks. For the AC survey, total biomass density of prey fish equaled 9.3 kg/ha, continuing a recent trend of index values above the long-term average of 5.4 kg/ha. For the fall BT, total biomass density of prey fish equaled 3.4 kg/ha, close to values observed since 2014 and well below historic numbers and those observed earlier in the 2000s. Over the period both surveys have been conducted (2004-2025), the total biomass density index had trended downward in the fall BT through the mid-2010s and appears to have stabilized at low values, while the AC survey biomass density index has remained relatively stable over the time series. Mean biomass of yearling and older (YAO) Alewife was 4.3 kg/ha in the AC survey and 0.45 kg/ha in the fall BT. Since 2014, annual survey results suggest that the catchability of YAO Alewife for the fall BT is substantially lower than the AC survey. The 2025 AC survey YAO Alewife biomass density estimate was 57% higher than the average from 2004-2024. The Alewife population of Lake Michigan appears to be composed mostly of young fish and the proportion of age-4 and older Alewife was ~5% in both surveys. Age-0 Alewife numeric density from the AC survey was 259 fish/ha in 2025, lower than the long-term mean (487 fish/ha). Biomass density of large (≥120 mm) Bloater was 3.5 kg/ha in the AC survey and 1.9 kg/ha in the fall BT. The density of small (<120 mm) Bloater was 540 fish/ha in the AC survey, the second highest value in the time series. Meanwhile, small Bloater density estimated in the fall BT was only 6.1 fish/ha. Biomass density of large Rainbow Smelt (≥90 mm) was 0.69 kg/ha in the AC survey and 0.04 kg/ha in the fall BT survey. Numeric density of small (<90 mm) Rainbow Smelt was 541 fish/ha in the AC survey, the highest value in the time series, and 41 fish/ha in the fall BT. All four prey fish species indexed only by the fall BT had below-average biomass densities. Deepwater Sculpin biomass density was 0.21 kg/ha, which makes 15 of the past 16 years with biomass <1 kg/ha. Slimy Sculpin was estimated to be 0.03 kg/ha, an order of magnitude lower than the long-term average from the fall BT. Round Goby biomass density was 0.44 kg/ha and Ninespine Stickleback density was 0.20 kg/ha, the highest value since 2007.

Lake Michigan↗

USGS2025

Status and trends of the Lake Huron prey fish community, 1976-2024

The U. S. Geological Survey-Great Lakes Science Center has monitored annual changes in the offshore (depth > 9m) prey fish community of Lake Huron since 1973. Monitoring of prey fish populations in Lake Huron is based on a bottom trawl survey that targets demersal species (i.e., those predominantly or intermittently associated with the lake bottom) and an acoustic-midwater trawl survey that targets pelagic species and life stages. Prey fish abundance and species composition in 2024 was generally consistent with trends observed over the past decade. Bloater ( Coregonus hoyi ) remains the most abundant and widespread prey species, although its abundance is starting to decline owing to changes in demographic factors that are interacting to suppress reproduction. Rainbow Smelt ( Osmerus mordax ) remain widely distributed across Lake Huron but their dynamics vary by basin. Rainbow Smelt populations currently are larger in Georgian Bay and the North Channel than in the main basin where they have produced eight weak year classes over the past decade including in 2024. Populations of Alewife ( Alosa pseudoharengus ) continue to be comprised of low numbers of age-0 individuals, and sculpin communities consist primarily of Deepwater Sculpin ( Myoxocephalus thompsonii ) due to the reduced abundance and distribution of Slimy Sculpin ( Cottus cognatus ). In contrast, biomass of the invasive Round Goby ( Neogobius melanostomus ) in 2024 was the highest observed in the bottom trawl time series and was over four times greater than in 2023. Overall status of main basin prey fish community was rated as ‘fair.’ Stable dynamics of main basin Bloater populations and evidence of continued recovery by Cisco ( Coregonus artedi ) in the North Channel were interpreted as positive community trends, whereas growth and expansion of Round Goby populations and low species diversity of pelagic prey fish communities are inconsistent with fish community objectives. Use of complementary surveys (bottom trawl, acoustics) remains useful for evaluating prey fish status in Lake Huron, where prey fish community dynamics vary by basin and prey fish responses to changing environmental conditions depend on species and/or habitat.

Lake Huron↗

USGS2025

Archive of morphological data for the Coregonus artedi species complex of the Great Lakes, Lake Nipigon and Great Slave Lake

This publication is a user guide for an archive of morphological data recorded by various authors from North American ciscoes of the Coregonus artedi species complex (subfamily Coregoninae ). The archive is accessible from the Great Lakes Fishery Commission’s (GLFC) server, is open access, and contains data for the Laurentian Great Lakes; Lake Nipigon, Ontario; and Great Slave Lake, Northwest Territories. The archive comprises morphometrics and meristics (together metrics) for 6,700 individual Cisco of which 1,400 are accompanied by images. In addition, the archive contains metrics presented as arrays by W. N. Koelz, Coregonid fishes of the Great Lakes, Bulletin of the U.S. Bureau of Fisheries 43(2):297-643, which were based on 10,000 individuals. Spreadsheets in the Metrics folder of the archive are divided broadly into Contemporary and Historical subfolders and the Contemporary subfolder is further divided into Cisco Monograph and Extra Monograph subfolders to encourage statistical assessment of findings in GLFC Miscellaneous Publication 2023. The Images folder is organized into subfolders by lake. Tables in this user guide allow for quick determination of the availability of data by lake, subspecies, author, and year.

Laurentian↗

USGS2024

Paired comparisons with quiet surface drones show evidence of fish behavioral response to motorized vessels during acoustic surveys in Lake Superior

Acoustic surveys are important for fish stock assessments, but fish responses to survey vessels can bias acoustic estimates. We leveraged quiet uncrewed surface vessels (USVs) to characterize potential bias in acoustic surveys. Five conventional motorized ships overtook USVs from astern over 2 km transects at night in Lake Superior in 2022. We examined the difference in acoustic backscatter, average target depth, and average target strength (TS) between USV and motorized vessels. Although sound level measurements from the motorized vessels sometimes exceeded recommendations for scientific vessels, we did not detect differences in acoustic measures among survey vessels. However, the USVs recorded 2 dB higher acoustic backscatter and TS than motorized vessels, leading to ~15% higher fish densities with drones when using in situ TS and echo integration. Differences in fish density would increase to 30-60% if a standard TS value was applied. Target depth did not differ between USVs and motorized ships. These results are consistent with a change in orientation but not depth of insonified fish and limited horizontal avoidance of motorized survey vessels.

Lake Superior↗

USGS2024

Status and trends of the Lake Huron prey fish community, 1976-2023

The U. S. Geological Survey-Great Lakes Science Center has monitored annual changes in the offshore (depth >9m) prey fish community of Lake Huron since 1973. Monitoring of prey fish populations in Lake Huron is based on a bottom trawl survey that targets demersal (benthic) species and an acoustic-midwater trawl survey that targets pelagic species and life stages. In 2023, Bloater ( Coregonus hoyi ) accounted for 77% of the main basin biomass in bottom trawls and 86% of the main basin biomass in the acoustics survey. Despite this sustained importance of native species in the main basin, species diversity is below desired levels. Bloater in the main basin has exhibited population growth and strong recruitment in recent years, and Cisco ( Coregonus artedi ) has exhibited increased biomass in the North Channel since 2015. In contrast non-native Alewife ( Alosa pseudoharengus ), whose population collapsed in 2004 and has not recovered, were less than 1% of fish biomass in 2023. Rainbow Smelt ( Osmerus mordax ) accounted for 7% of the main basin biomass in bottom trawls and 22% of the main basin biomass in the acoustics survey. Despite remaining the second-most abundant prey species in the main basin, Rainbow Smelt has not shown appreciable increases in biomass despite recent strong year classes. Deepwater Sculpin ( Myoxocephalus thompsonii ) increased by 47% in 2023 and were 33% of the long-term average. Slimy Sculpin ( Cottus cognatus ) increased to 60% of the long-term average but remained rare in bottom trawl catches. In contrast, biomass of Round Goby ( Neogobius melanostomus ), a non-native species similar ecologically to the sculpin species, remained near the record high biomass reached in 2022. Current lake conditions characterized by ongoing oligotrophication seem to favor native coregonines over non-native fishes. Use of complementary surveys (bottom trawl, acoustics) remains important for evaluating prey fish status in Lake Huron, where prey fish community dynamics vary by basin and prey fish responses to changing environmental conditions depend on species and/or habitat.

Lake Huron↗

USGS2023

Lake Trout population dynamics in the Northern Refuge of Lake Michigan: Importance of stocking rate

Objective The Northern Refuge of Lake Michigan was established under the auspices of the Great Lakes Fishery Commission in 1985 as an additional step toward restoring a self‐sustaining Lake Trout Salvelinus namaycush population to the lake. The overall goal of our study was to assess progress toward Lake Trout rehabilitation in the Northern Refuge through 2021. Methods We conducted annual (1992–2021) gill‐net surveys in the fall to assess the adult population and beam trawl surveys in the spring to assess naturally reproduced age‐0 Lake Trout. Result Spawner abundance averaged 45 fish • 305 m of gill net −1 • day −1 during 1992–1999, just 4 fish • 305 m of gill net −1 • day −1 during 2000–2014, and then 67 fish • 305 m of gill net −1 • day −1 during 2018–2021. Sea Lamprey Petromyzon marinus wounding rate decreased by nearly 90% between the 2000–2014 and 2015–2021 periods. The average annual mortality rate of adult Lake Trout decreased from 43% during the 1990s and 2000s to 22% during 2015–2021. All of these population dynamics were partly driven by changes in Lake Trout stocking rates, which declined by roughly 50% during 1994–1996 but then increased roughly twofold during 2006–2010 and remained at this higher level during 2010–2018. In 2021, early signs of natural recruitment of Lake Trout became evident. Beam trawling during June 2021 yielded a wild age‐0 Lake Trout, the first ever caught since the surveys began in 1992. In addition, 15 (4% of total catch) of the Lake Trout caught in the fall 2021 gill‐net survey were unclipped (wild) fish. Estimated ages of these wild fish indicated that natural recruitment had begun sometime around 2015. Conclusion With Alewife Alosa pseudoharengus abundance in Lake Michigan at record low levels, Sea Lamprey wounding rate greatly reduced, and Lake Trout spawner abundance at relatively high levels, the outlook for Lake Trout rehabilitation in the Northern Refuge holds promise.

Northern Refuge of Lake Michigan↗

USGS2023

Comparison of traditional and geometric morphometrics using Lake Huron ciscoes of the Coregonus artedi complex

Here we determine how traditional morphometrics (TM) compares with geometric morphometrics (GM) in discriminating among morphologies of four forms of ciscoes of the Coregonus artedi complex collected from Lake Huron. One of the forms comprised two groups of the same deepwater cisco separated by capture depth, whereas the other three forms were shallow-water ciscoes. Our three groups of shallow-water ciscoes were better separated (3% versus 19% overlap) in Principle Component Analysis (PCA) with TM data than with GM data incorporating semilandmarks (evenly spaced nonhomologous landmarks used to bridge between widely separated homologous landmarks). Our two deepwater cisco groups, comprising a putatively single form collected from different depths, separated more in PCAs with GM data (33% overlap) than in PCAs with TM data (66% overlap), an anomaly caused by greater decompression of the swimbladder and deformation of the body wall in the group captured at greater depths. Separation of the two deepwater cisco groups captured at different depths was not affected by the removal of semilandmarks. Assignment of forms using canonical variate analysis (CVA) accurately assigned 86% of individuals using TM data, 98% of individuals using GM data incorporating semilandmarks, and 100% of individuals using GM data without semilandmarks. However, we considered assignments from the same form of deepwater cisco into separate groups as misassignments resulting from different capture depths, which reduced the accuracy of assignments with GM data to 66% with semilandmarks. Our study implies that TM will continue to have an important role in morphological discrimination within Coregonus and other fishes similarly shaped.

Lake Huron↗

USGS2023

Large-scale variation in lakebed properties interpreted from single-beam sonar in two Laurentian Great Lakes

Acoustic seabed classification (ASC) is an important method for understanding landscape-level physical and biological patterns in the aquatic environment. Bottom habitats in the Laurentian Great Lakes are poorly mapped to date, and will require a variety of contributors and data sources to complete. We repurposed a long-term split-beam echosounder dataset gathered for purposes of fisheries assessment to estimate lakebed properties utilizing unsupervised classification of echo return data. We interpreted first echo properties representing lakebed hardness and roughness to define and map three statistically supported lakebed classes revealed through cluster analysis. Our results indicate coherent and logical class boundaries and suggest that the dataset has promise for expanded use in ASC. To improve inferences using repeated measures, future work should focus on collecting ground truth information for areas previously surveyed and on collecting concurrent ground truth information when sampling acoustic data moving forward.

Michigan, Ontario, Wisconsin↗

USGS2023

Intra-lake trends and inter-lake comparisons of Mysis diluviana life history variables and their relationships to food limitation

The opossum shrimp, Mysis diluviana , is an important member of the offshore food webs of the Laurentian Great Lakes, but its response to ecosystem changes that have occurred over the past several decades is not well understood. We combined the data of four long-term sampling programs, adding several years of data (post and prior) to previously published analyses to offer a longer-term, cross-basin analysis of M. diluviana populations in the Great Lakes from 1997 to 2019. Densities were high in lakes Superior and Ontario (summer values 100–300/m 2 ), high and variable but declining (from 200–300/m 2 in 1997–2004 to less than 100/m 2 in 2017–2019) in Lake Michigan, low (∼20–50/m 2 since 2005) in Lake Huron, and very low in shallower eastern Lake Erie (<1/m 2 ). Biomass showed similar trends. Life history parameters (mortality, fecundity, and growth) were consistently highest in eastern Lake Erie, followed by lakes Ontario, Michigan, Huron, and Superior. Generation time was 1 year in Lake Erie and 2 years in the other lakes. Cross-basin relationships between annual M. diluviana areal densities and food indices (chlorophyll-a concentration and zooplankton biomass) were non-linear, increasing with food levels up to about 250 mysids/m 2 and about 650 mg dry wt/m 2 . Annual growth rates were also positively correlated to both food indices in the four deep lakes, but fecundity and mortality rates were not. Our results suggest food availability is a primary factor predicting M. diluviana density and biomass. Density-dependent mortality and fish predation could explain some of the inter-lake differences, but these relationships could benefit from further investigations.

Laurentian Great Lakes↗

USGS2023

Status and trends of the Lake Huron prey fish community, 1976-2021

The U.S. Geological Survey Great Lakes Science Center has assessed annual changes in the offshore prey fish community of Lake Huron since 1973. Assessments are based on a bottom trawl survey conducted in October of each year and an acoustics-midwater trawl survey, which began in 2004 and is conducted in September-October. Due to weather delays and continued travel restrictions during 2021, there were no bottom trawl samples off the port of Goderich, Ontario and two acoustic transects were cancelled in Georgian Bay. Prey fish biomass in Lake Huron in 2021 was dominated by two species, Bloater (Coregonus hoyi) and Rainbow Smelt (Osmerus mordax). In the main basin, prey fish biomass remained below levels observed prior to community-wide declines that began in the early to mid 1990s. Bloater was the most abundant prey fish species in the main basin, whereas Rainbow Smelt was the most abundant prey species in the North Channel and in Georgian Bay. Both surveys suggested that Bloater biomass is increasing in the main basin. Low biomass of invasive species like Alewife (Alosa pseudoharengus) and Rainbow Smelt is consistent with fish community objectives focused on restoration of native fish communities. Abundance of invasive Round Goby (Neogobius melanostomus) increased in 2021 relative to 2019-2020. Biomass of the native Cisco (Coregonus artedi) increased in the North Channel in 2021 but remained low in Georgian Bay, possibly as an artifact of reduced sampling. Biomass of Slimy Sculpin (Cottus cognatus) and Deepwater Sculpin (Myoxocephalus thompsoni) in 2021 remained low but within the range observed over the past decade. Reduced lake productivity, predation by a recovering piscivore community, and shifts in food web dynamics that favor fish production in nearshore environments may prevent prey fish biomass in offshore areas from returning to levels observed prior to the early 1990s. However, increased biomass of Bloater and Cisco suggests that lake conditions may favor recovery of native corgonines.

Lake Huron↗

USGS2023

Status and trends of the Lake Huron prey fish community, 1976-2022

The United States Geological Survey-Great Lakes Science Center has monitored annual changes in the offshore prey fish community of Lake Huron since 1973. Monitoring of prey fish populations in Lake Huron is based on a bottom trawl survey that targets demersal (benthic) species and an acoustic-midwater trawl survey that targets pelagic species and life stages. Status of the main basin prey fish community in 2022 was considered ‘Fair’ due to sustained improvements in native species status but species diversity that remains below desired levels. Current lake conditions, characterized by ongoing oligotrophication, seem to favor native coregonines like Bloater ( Coregonus artedi ), which in the main basin has exhibited signs of population growth and strong recruitment in recent years, and Cisco ( Coregonus artedi ), whose biomass in the North Channel increased for the second consecutive year in 2022. In contrast, conditions in the main basin are less favorable for exotic prey fish such as Alewife ( Alosa pseudoharengus ), whose population collapsed in 2014 and has not recovered, and Rainbow Smelt ( Osmerus mordax ), which remains the second-most abundant prey species in the main basin but has produced multiple weak year classes over the past decade including in 2022. Status of benthic prey fish in the main basin in 2022 depended on species. As in prior years, the native sculpin community in 2022 consisted primarily of Deepwater Sculpin ( Myoxocephalus thompsoni ) because Slimy Sculpin ( Cottus cognatus ) has become exceedingly rare. In contrast, biomass of the ecologically similar Round Goby ( Neogobius melanostomus ), an exotic species, reached an all-time high in 2022. Use of complementary surveys (bottom trawl, acoustics) remains important for evaluating prey fish status in Lake Huron, where prey fish community dynamics vary by basin and prey fish responses to changing environmental conditions depend on species and/or habitat.

Lake Huron↗

USGS2022

Status and trends of the Lake Huron prey fish community, 1976-2019

The USGS Great Lakes Science Center has assessed annual changes in the offshore prey fish community of Lake Huron since 1973. Assessments are based on a bottom trawl survey conducted in October of each year and an acoustics-midwater trawl survey, which began in 2004 and is conducted in September-October. Both surveys were completed in their entirety in 2019. Prey fish biomass in Lake Huron in 2019 was dominated by two species, Bloater ( Coregonus hoyi ) and Rainbow Smelt ( Osmerus mordax ). In the main basin, prey fish biomass remained below levels observed prior to community-wide declines that began in the early to mid 1990s. Bloater was the most abundant prey fish species in the main basin, whereas Rainbow Smelt was the most abundant prey species in the North Channel and in Georgian Bay. Both surveys suggested that Bloater biomass is increasing in the main basin. Low biomass of invasive species like Alewife ( Alosa pseudoharengus ) and Rainbow Smelt is consistent with fish community objectives focused on restoration of native fish communities. Abundance of invasive Round Goby (Neogobius melanostomus) in 2019 was low relative to 2018. Biomass of the native Cisco ( Coregonus artedi ) continued to increase in the North Channel and Georgian Bay. Biomass of slimy sculpin ( Cottus cognatus ) and Deepwater Sculpin ( Myoxocephalus thompsoni ) in 2019 was down from 2018 but within the range observed over the past decade. Reduced lake productivity, predation by a recovering piscivore community, and shifts in food web dynamics that favor fish production in nearshore environments may prevent prey fish biomass in offshore areas from returning to levels observed prior to the early 1990’s. However, increased biomass of Bloater and Cisco suggests that lake conditions may favor recovery of native coregonids.

Lake Huron↗

USGS2022

Status and trends of the Lake Huron prey fish community, 1976-2020

The USGS Great Lakes Science Center (GLSC) has assessed annual changes in the offshore prey fish community of Lake Huron since 1973. Assessments are based on a bottom trawl survey conducted in October and an acoustics-midwater trawl survey conducted in September-October. In 2020, USGS-GLSC vessels were not permitted to cross into Canada due to the COVID-19 pandemic, so prey fish surveys sampled only sites in U.S. (Michigan) waters of Lake Huron. This prevented USGS from providing information about the current status and trends of prey fish communities in Georgian Bay and the North Channel. Prey fish biomass in U.S. waters of Lake Huron in 2020 remained below levels observed prior to community-wide declines that began in the early to mid-1990s. Fish community biomass was dominated by two species, Bloater (Coregonus hoyi) and Rainbow Smelt (Osmerus mordax). While both surveys found Bloater biomass in the main basin had declined from levels observed in 2019, Bloater still comprised over three-quarters of prey fish biomass in Lake Huron in 2020. Biomass and abundance for other prey fish species were within the range observed over the past five years. Current low biomass of invasive species like Alewife (Alosa pseudoharengus) and Rainbow Smelt is consistent with fish community objectives focused on restoration of native fish communities. Reduced lake productivity, predation by a recovering piscivore community, and shifts in food web dynamics that favor fish production in nearshore environments may prevent prey fish biomass in offshore areas from returning to levels observed prior to the early 1990’s. However, the dominance of Bloater in bottom trawl catches and acoustic surveys suggests that current lake conditions are conducive to the recovery of some native species.

Lake Huron↗

USGS2021

Replacement of the typical artedi form of Coregonus artedi in Lake Huron by endemic shallow-water Ciscoes, including putative hybrids

Various ecomorphs of shallow-water Cisco Coregonus artedi were the dominant fish planktivores in each of the Great Lakes until invasive species and over fishing resulted in extirpations and extinctions. In this paper we describe the present morphological diversity and distribution of shallow-water Ciscoes in each of Lake Huron’s three basins: the main basin, Georgian Bay, and North Channel. Typical artedi , a formerly widespread ecomorph, which had supported the lake’s largest fishery, appears to have been extirpated from all three basins. Three types of shorthead ciscoes, a recently described and variable ecomorph, were extant. One type was morphologically robust and abundant along the north rim of the lake. The second type was large bodied, terete, short finned, and collected at only one location in the main basin. The third type consisted of putative shorthead cisco × typical artedi hybrids, which were widespread in Georgian Bay and the North Channel. Only the putative hybrids were regularly collected in midwater trawls, suggesting they were more-pelagic, which we attribute to an inferred partial ancestry with typical artedi . The putative shorthead cisco × typical artedi hybrids of Georgian Bay and the North Channel have replaced typical artedi to some degree, while shorthead ciscoes in the main basin, though possibly more abundant now than in the past, have not measurably replaced typical artedi . Even with the apparent extirpation of typical artedi , Lake Huron has a greater diversity of shallow-water Ciscoes than any of the other Great Lakes, which we attribute to its more-complex topography.

Lake Huron↗

USGS2019

Phenology and species diversity in a Lake Huron ichthyoplankton community: Ecological implications of invasive species dominance

Ichthyoplankton communities are dynamic and vary spatiotemporally based on factors such as wind, water currents, and phenology. Nonetheless, ichthyoplankton are an indicator of spawning success in fish populations and examining their community diversity and composition can serve to provide information on ecosystem integrity. Although some ichthyoplankton species may be transient, understanding their distribution in space and time provides information on species composition, abundance, and habitat use during critical early life stages. We sampled the spring-summer ichthyoplankton community during 2008 and 2009 in northern Lake Huron to determine species succession, abundance, and species diversity along physical and environmental gradients. Seasonal succession of species was similar during both years, indicating well-defined patterns in spawning by local populations. Invasive alewife, rainbow smelt, and round goby were the dominant species during both years, with native stickleback species also abundant. Shannon Entropy (H’) increased with increasing water temperature until late summer when H’ declined. H’ decreased with increasing bottom depth and distance to tributary mouth indicating the important ecological role of these habitat features during early life stages. Although ichthyoplankton diversity was comparable to or higher than that reported for other areas of the Great Lakes, the prominence of invasive species in our study is reflective of the degraded state of the Lake Huron fish community, despite large reductions in invasive planktivorous fish since 2004. Continued monitoring of ichthyoplankton communities will be important for measuring the impacts of species invasions or other ecosystem stressors on fish community structure in the Great Lakes.

Lake Huron↗

USGS2019

Spatial patterns of rainbow smelt energetic condition in Lakes Huron and Erie in 2017: Evidence for Lake Huron resource limitation

Rainbow smelt ( Osmerus mordax ) is a key planktivore and prey fish in Lake Huron. Given the declining offshore productivity in the lake since the early 2000s, we described the energy content of rainbow smelt in 2017 across five different regions (North Channel, Georgian Bay, Saginaw Bay, northern main basin, southern main basin) where phytoplankton and zooplankton productivity likely varied. To increase contrast across the productivity gradient, rainbow smelt energy content was also estimated from western Lake Erie. Within the North Channel where large fish (≥90 mm, total length) were sampled most frequently, mean energy density (kJ/g wet weight) varied seasonally: 4.29 in April (month of spawning), 3.86 in June, 3.99 in July, and up to 4.35 in September. Energy density of rainbow smelt from higher productivity western Lake Erie was 37% (large fish ≥90 mm) to 60% higher (small fish <90 mm) than that of fish from Lake Huron. Within Lake Huron, energy density of rainbow smelt from North Channel was slightly higher than those from other regions; rainbow smelt from Georgian Bay generally had the lowest energy density. Across regions, including western Lake Erie, energy density increased with chlorophyll a concentration. Compared with Lake Huron studies prior to 2004, when oligotrophication had not yet accelerated, energy density of rainbow smelt in 2017 was up to 31% lower. The decline in rainbow smelt energy density is likely the result of declining primary and secondary pelagic production and increased resource limitation for planktivorous fish.

Michigan, Ohio, Ontario↗