Geology topics

Sudeep Chandra

Publications and source records attributed to Sudeep Chandra.

At least 19 recordsLinked to original sources

USGS2026

The Zooplankton International Geospatial (ZIG) dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research

Zooplankton transfer substantial energy in aquatic food webs and are used as indicators of environmental change. Syntheses of zooplankton community dynamics globally require datasets that span a wide range of environmental gradients; however, these datasets are limited due to methodological differences across programs, taxonomic inconsistencies, and a lack of standardized metadata. To reconcile these challenges, we created the Zooplankton International Geospatial (ZIG) dataset, which includes original zooplankton, water physical and chemical variables, and lake morphometric data from 311 inland lakes and reservoirs. ZIG includes waterbodies ranging in size from 0.005 to 82,100 km 2 and spanning broad latitudinal (−47.26 to 64.90) and longitudinal ranges (−165.04 to 176.53). Temporal coverage for individual waterbodies ranges between 1 and 60 yr with sampling frequency ranging from annually to weekly. With its extensive coverage and content, we consider ZIG to be a cornerstone for future investigations of global scale lake biodiversity change.

Limnology & Oceanography - Letters↗

USGS2025

The influence of mountain streamflow on nearshore ecosystem metabolism in a large, oligotrophic lake across a drought and a wet year

The influence of streamflow can be highly heterogeneous around lake edges, making it challenging to predict how benthic productivity in the littoral zone responds to hydroclimatic change. The degree to which streamflow affects nearshore productivity varies as a function of catchment characteristics, internal lake morphometry, and processes. This study investigates the relative influence of streamflow on nearshore metabolism (e.g., gross primary productivity [GPP], ecosystem respiration [ER], and net ecosystem productivity [NEP]) for shores with large, small, or no stream inflows (four locations across two shores) during two contrasting water years (one drought and one wet) in Lake Tahoe (Nevada/California, USA). Using Bayesian structural equation modeling, we found streamflow decreased water temperature, benthic light, and GPP across both years. Compared to the drought year, the subsequent wet year had 54% higher annual streamflow, 37% less light, and lower NEP at locations with large or small inflows (39% Δ −0.32 mmol O₂ m −3 d −1% and 49% Δ −1.19 mmol O₂ m −3 d −1 , respectively). During the wet year, we observed a 68% increase in the negative association between streamflow and nearshore GPP at the large inflow and a 62% decrease in the positive association between streamflow and GPP at the small inflow. This work demonstrates how oligotrophic littoral productivity varies across shorelines and in response to hydrological conditions, with streamflow and precipitation exerting contrasting effects depending on the proximity to inflowing streams. Our results suggest future lake responses to climate volatility depend on spatial and temporal hydrologic connectivity to catchments and upland processes.

California, Nevada↗

USGS2025

Lake depth and light conditions alter Mysis vertical distributions

Light regulates the vertical migration of many aquatic organisms. Mysis species couple pelagic and benthic habitats in lakes by diel vertical migrations (DVM), transporting energy and nutrients through the water column and food web. Although Mysis are generally assumed to remain on the bottom during the day, some have been observed in the pelagic zone during the day, indicating incomplete benthic-pelagic coupling in some systems. The degree to which light attenuation and lake depth interact to affect occurrence of mysids within the water column during the day is understudied. We used standardized Mysis net sampling in summers 2020 and 2021 across nine north-temperate lakes to test the hypotheses that 1) Mysis remain pelagic during the day at depths with sufficiently low light levels, and 2) pelagic-caught individuals during the day are, on average, smaller than those caught at night. To test these hypotheses, we assessed light, dissolved oxygen (DO), Mysis densities, and size distribution between night and day across bathymetric depths. In deep lakes and darkly colored shallow lakes, Mysis suspended in the water column during the day where light levels decreased to their light avoidance threshold (∼10 -5 to 10 -6 lx ). Mysis suspended in the water column during the day were smaller than those collected at night. Further, Mysis were not captured when DO reached levels < 3 mg/L, regardless of light conditions. Our results suggest that benthic-pelagic coupling by Mysis is mediated through light conditions, lake morphometry, and DO conditions, and may include some degree of size-dependent behavior.

Journal of Great Lakes Research↗

USGS2024

Controls on lake pelagic primary productivity: Formalizing the nutrient-color paradigm

Understanding controls on primary productivity is essential for describing ecosystems and their responses to environmental change. Lake primary production is strongly controlled by inputs of nutrients and colored dissolved organic matter. While past studies have developed mathematical models of this nutrient-color paradigm, broad empirical tests of these models are scarce. We used data from 58 diverse and globally distributed temperate lakes to test such a model and improve understanding and prediction of the controls on lake primary production. These lakes varied widely in size (0.02-2300 km2), pelagic gross primary production (20-8000 mg C m-2 d-1), and other characteristics. Across these diverse systems, and given relatively limited inputs, model predictions of primary production were highly correlated with observed values derived from high-frequency sensor data. Our analysis provides a model structure, including calibrated parameter estimates, that may be broadly useful for understanding current and future patterns in lake primary production.

JGR Biogeosciences↗

USGS2024

Environmental and societal consequences of winter ice loss from lakes

More than half a billion people live near lakes that freeze over in the winter. However, lakes are rapidly losing winter ice cover in response to warming, and the rate of loss has accelerated over the past 25 years. Hampton et al . reviewed the state of seasonal ice cover on lakes and discuss some of the consequences of its disappearance. Ice loss will affect culture, economy, water quality, fisheries, and biodiversity, as well as weather and climate. —Jesse Smith

Science↗

USGS2022

Reimagine fire science for the anthropocene

Fire is an integral component of ecosystems globally and a tool that humans have harnessed for millennia. Altered fire regimes are a fundamental cause and consequence of global change, impacting people and the biophysical systems on which they depend. As part of the newly emerging Anthropocene, marked by human-caused climate change and radical changes to ecosystems, fire danger is increasing, and fires are having increasingly devastating impacts on human health, infrastructure, and ecosystem services. Increasing fire danger is a vexing problem that requires deep transdisciplinary, trans-sector, and inclusive partnerships to address. Here, we outline barriers and opportunities in the next generation of fire science and provide guidance for investment in future research. We synthesize insights needed to better address the long-standing challenges of innovation across disciplines to (i) promote coordinated research efforts; (ii) embrace different ways of knowing and knowledge generation; (iii) promote exploration of fundamental science; (iv) capitalize on the “firehose” of data for societal benefit; and (v) integrate human and natural systems into models across multiple scales. Fire science is thus at a critical transitional moment. We need to shift from observation and modeled representations of varying components of climate, people, vegetation, and fire to more integrative and predictive approaches that support pathways toward mitigating and adapting to our increasingly flammable world, including the utilization of fire for human safety and benefit. Only through overcoming institutional silos and accessing knowledge across diverse communities can we effectively undertake research that improves outcomes in our more fiery future.

PNAS Nexus↗

USGS2022

Lake Tahoe clarity and associated conditions, 2022

Lake Tahoe’s clarity remains a key indicator of overall ecosystem status, and scientific understanding about factors affecting lake clarity continues to evolve. The purpose of this briefing memorandum is to summarize the status of clarity metrics and drivers of change discussed in the 2022 TSAC Data Synthesis and Analysis report. Consistent with the Lake Tahoe Total Maximum Daily Load analyses, the concentrations of fine particles remain important to lake clarity. These include fine sediment particles from the watershed as well as small phytoplankton cells produced within the lake. This year, in addition to the analysis of Secchi depth clarity response to fine particle and small phytoplankton concentrations, we reviewed available data on fine sediment particles from streams and urban runoff. Information summarized here is discussed further in the Tahoe Science Advisory Council (TSAC) Data Synthesis and Analysis reports (2022, 2021), the TSAC Lake Tahoe Seasonal and Long-Term Clarity Trend Analysis report (2020), and in annual State of the Lake reports produced by UC Davis Tahoe Environmental Research Center.

California, Nevada↗

USGS2021

Estimating pelagic primary production in lakes: Comparison of 14C incubation and free-water O2 approaches

Historically, estimates of pelagic primary production in lake ecosystems were made by measuring the uptake of carbon-14 ( 14 C)-labeled inorganic carbon in samples incubated under laboratory or in situ conditions. However, incubation approaches are increasingly being replaced by methods that analyze diel changes in high-frequency in situ data such as free-water dissolved oxygen (O 2 ). While there is a rich literature on the comparison of approaches for estimating primary production using incubations (e.g., 14 C and O 2 bottle experiments), as well for approaches using high-frequency data (e.g., diel O 2 and CO 2 metabolism models), there are few direct comparisons of 14 C incubations and free-water O 2 approaches for estimating primary production. We used 20 lake-years of concurrent measurements of primary production quantified from high-frequency free-water O 2 data and 14 C incubations in four different lakes (4–7 years per lake) to compare these different approaches. Across all lakes, 61% of the 14 C production estimates were within the 95% credible intervals of the free-water O 2 production estimates. Error-in-variable regressions support the assumption that 14 C methods estimate a production value between gross primary production and net primary production and the bottle effect is constant across the entire range of production values considered here. There was little evidence that daily pelagic, epilimnetic estimates of primary production differed substantially based on the selection of free-water O 2 or 14 C approaches in these lakes during summer stratified conditions.

Limnology and Oceanography: Methods↗

USGS2021

Blue waters, green bottoms: Benthic filamentous algal blooms are an emerging threat to clear lakes worldwide

Nearshore (littoral) habitats of clear lakes with high water quality are increasingly experiencing unexplained proliferations of filamentous algae that grow on submerged surfaces. These filamentous algal blooms (FABs) are sometimes associated with nutrient pollution in groundwater, but complex changes in climate, nutrient transport, lake hydrodynamics, and food web structure may also facilitate this emerging threat to clear lakes. A coordinated effort among members of the public, managers, and scientists is needed to document the occurrence of FABs, to standardize methods for measuring their severity, to adapt existing data collection networks to include nearshore habitats, and to mitigate and reverse this profound structural change in lake ecosystems. Current models of lake eutrophication do not explain this littoral greening. However, a cohesive response to it is essential for protecting some of the world's most valued lakes and the flora, fauna, and ecosystem services they sustain.

BioScience↗

USGS2020

Drivers and projections of ice phenology in mountain lakes in the western United States

Climate change is causing rapid warming and altered precipitation patterns in mountain watersheds, both of which influence the timing of ice breakup in mountain lakes. To enable predictions of ice breakup in the future, we analyzed a dataset of mountain lake ice breakup dates derived from remote sensing and historical downscaled climate data. We evaluated drivers of ice breakup, constructed a predictive statistical model, and developed projections of mountain lake ice breakup date with global climate models. Using Random Forest analysis, we determined that winter and spring cumulative snow fraction (portion of precipitation falling as snow) and air temperature are the strongest predictors of ice breakup on mountain lakes. Interactions between precipitation, cumulative winter air temperature and lake surface area indicate that shifts in air temperature and precipitation affect smaller lakes (< 2 km 2 ) more than larger lakes (> 2–10 km 2 ). A linear mixed effects model (RMSE of 18 d), applied with an ensemble of 15 global climate models, projected that end-of-century ice breakup in mountain lakes will be earlier by 25 ± 4 and 61 ± 5 (mean ± SE) days for representative concentration pathways 4.5 and 8.5, respectively.

California, Idaho, Oregon, Washington↗

USGS2020

A 450-year record of environmental change from Castle Lake, California (USA), inferred from diatoms and organic geochemistry

A 39-cm sediment core from Castle Lake, California (USA) spans the last ~ 450 years and was analyzed for diatoms and organic geochemistry (δ 15 N, δ 13 C, and C:N), with the goal of determining sensitivity to natural climate variation and twentieth century anthropogenic effects. Castle Lake is a subalpine, nitrogen-limited lake with ~ 5 months of annual ice cover. Human impacts include light recreational use, past fish stocking, and experimental use by the Castle Lake Research Station. The base of the core (below 32 cm; pre mid-1700s) represents the period of maximum ice cover. In contrast, the end of the Little Ice Age (mid 1700s–early 1800s) is dominated by cyclotelloids (mostly Discostella stelligera ), indicating significant open-water periods, a condition that persisted into the early 1900s. Cyclotelloids began to decline in the 1960s and were replaced by the Fragilaria tenera grp. (peak in 1970s), succeeded by Asterionella formosa (peak ~ 2010), and accompanied by a reduction in δ 15 N values and a decrease in C:N that may represent increased atmospheric nitrogen deposition. Another anthropogenic signal was discerned in the core and was interpreted to be the result of an ammonium nitrate fertilization experiment of the epilimnion that was conducted in 1980 and 1981. This signal was manifested in the core largely by a negative excursion in δ 15 N, possibly caused by fractionation during denitrification in surface sediment. A phytoplankton monitoring dataset collected by the Castle Lake Research Station from 1967 to 1984 corroborates the timing of increased araphid euplanktonic species in the 1970s, and increases in two benthic diatoms ( Staurosirella pinnata and Tabellaria fenestrata) , entrained in the phytoplankton tows during the experimentation years. Both ice cover and nitrogen addition appear to be strong drivers that affected the lake diatoms, although additional drivers, such as fish stocking and associated cascade effects need further exploration. These data will be helpful for interpreting longer core records from Castle Lake, should the opportunity arise, as well as cores from similar systems in the region.

California↗

USGS2020

Understanding mountain lakes in a changing world: Introduction to the special issue

No abstract available.

Aquatic Sciences↗

USGS2019

Linkages between hydrology and seasonal variations of nutrients and periphyton in a large oligotrophic subalpine lake

Periphyton is important to lake ecosystems, contributing to primary production, nutrient cycling, and benthic metabolism. Increases in periphyton growth in lakes can be indicative of changes in water quality, shifts in ecosystem structure, and increases in nutrient fluxes. In oligotrophic lakes, conservationists are interested in characterizing the influence of hydrological drivers on excessive periphyton growth along nearshore areas. We collected nutrient samples bi-weekly from groundwater and surface water during a 9-month monitoring period to evaluate the timing and availability of nutrients to eulittoral periphyton in Lake Tahoe. Groundwater discharge rates were measured synoptically using seepage meters and estimated indirectly using continuous head gradient measurements and aquifer properties estimated by slug tests. The discharge measurements made from the seepage meter measurements provide information about the spatial variability perpendicular from shore along and the change in groundwater discharge due to wave action. Algal biomass sampled from substrates and observed using underwater photographs were used to correlate seasonal growth and nutrient concentrations in groundwater and lake water. Results indicate that groundwater and nutrient discharge are temporally variable due to seasonal changes in recharge within the watershed, wave action, and lake stage. Groundwater discharge was enhanced by the seasonally-low lake stage and episodic recharge caused by precipitation falling as rain in the watershed. Increases in dissolved phosphorus and nitrate in the lake during winter are attributed to groundwater discharge and correlates to increases in algal biomass in the nearshore area. Results indicate that nutrient-rich groundwater discharge appears to stimulate seasonal periphyton blooms along the eulittoral zone of Lake Tahoe.

California↗

USGS2015

Hydroecological condition and potential for aquaculture in lakes of the arid region of Khorezm, Uzbekistan

With >400 small (<1 ha) lakes, the arid Khorezm Province in Uzbekistan may be well-suited for aquaculture production. Developing water resources to provide a local food supply could increase fish consumption while improving the rural economy. Hydroecological (biological and physical) and chemical characteristics (including legacy pesticides ΣDDT and ΣHCH) of four representative drainage lakes in Khorezm from 2006 to 2008 were analyzed for the lakes’ capability to support healthy fish populations. Lake characteristics were categorized as “optimal” (having little or no effect on growth and development), “tolerable” (corresponding to chronic or sub-lethal toxicity) and “lethal” (corresponding to acute toxicity). Results indicate that three lakes are likely well-suited for raising fish species, with water quality meeting World Bank aquaculture guidelines. However, the fourth lake often had salinity concentrations > optimal levels for local fish species. Pesticide concentrations in water of all four lakes were within tolerable aquaculture ranges. Although water ΣDDT concentrations were >optimal limits, results from chemical analysis of fish tissues and semi-permeable membrane devices indicated that study lake ΣDDT concentrations were not accumulating in fish or posing a human health threat. Land and water management to maintain adequate lake water quality are imperative for sustaining fish populations for human consumption.

Khorezm↗

USGS2015

Natural trophic variability in a large, oligotrophic, near-pristine lake

Conclusions drawn from stable isotope data can be limited by an incomplete understanding of natural isotopic variability over time and space. We quantified spatial and temporal variability in fish carbon and nitrogen stable isotopes in Lake Hövsgöl, Mongolia, a large, remote, oligotrophic lake with an unusually species-poor fish community. The fish community demonstrated a high degree of trophic level overlap. Variability in δ 13 C was inversely related to littoral-benthic dependence, with pelagic species demonstrating more δ 13 C variability than littoral-benthic species. A mixed effects model suggested that space (sampling location) had a greater impact than time (collection year) on both δ 13 C and δ 15 N variability. The observed variability in Lake Hövsgöl was generally greater than isotopic variability documented in other large, oligotrophic lakes, similar to isotopic shifts attributed to introduced species, and less than isotopic shifts attributed to anthropogenic chemical changes such as eutrophication. This work complements studies on isotopic variability and changes in other lakes around the world.

Journal of Great Lakes Research↗

USGS2015

Temporal and basin-specific population trends of quagga mussels on soft sediment of a multi-basin reservoir

Invasive quagga (Dreissena bugnesis) and zebra (Dreissena ploymorpha) mussels have rapidly spread throughout North America. Understanding the relationships between environmental variables and quagga mussels during the early stages of invasion will help management strategies and allow researchers to predict patterns of future invasions. Quagga mussels were detected in Lake Mead, NV/AZ in 2007, we monitored early invasion dynamics in 3 basins (Boulder Basin, Las Vegas Bay, Overton Arm) bi-annually from 2008-2011. Mean quagga density increased over time during the first year of monitoring and stabilized for the subsequent two years at the whole-lake scale (8 to 132 individuals·m-2, geometric mean), in Boulder Basin (73 to 875 individuals·m-2), and in Overton Arm(2 to 126 individuals·m-2). In Las Vegas Bay, quagga mussel density was low (9 to 44 individuals·m-2), which was correlated with high sediment metal concentrations and warmer (> 30°C) water temperatures associated with that basin. Carbon content in the sediment increased with depth in Lake Mead and during some sampling periods quagga density was also positively correlated with depth, but more research is required to determine the significance of this interaction. Laboratory growth experiments suggested that food quantity may limit quagga growth in Boulder Basin, indicating an opportunity for population expansion in this basin if primary productivity were to increase, but was not the case in Overton Arm. Overall quagga mussel density in Lake Mead is highly variable and patchy, suggesting that temperature, sediment size, and sediment metal concentrations, and sediment carbon content all contribute to mussel distribution patterns. Quagga mussel density in the soft sediment of Lake Mead expanded during initial colonization, and began to stabilize approximately 3 years after the initial invasion.

Book chapter↗

USGS2012

Wildlife and biological resources: Chapter 5 in A synthesis of aquatic science for management of Lakes Mead and Mohave

The creation of Lakes Mead and Mohave drastically changed habitats originally found along their region of the historical Colorado River. While still continuing to provide habitat conditions that support a rich diversity of species within the water, along shorelines, and in adjacent drainage areas, the reservoirs contain organisms that are both native and non-native to the Colorado River drainage (fig. 5-1). The diversity of species within these lakes continues to change with time due to changing habitat conditions, the invasion of non-native species, and extirpations of native species. From the bottom of the food web to the top predators, all organisms within the ecosystem are interconnected in food webs or food-chain networks. As non-native invasive species continue to be introduced into the lakes, alterations to the food web, species competition, and species predation likely will continue to change the ecosystem and populations of native organisms. Following an overview of the food web, this chapter summarizes information on aquatic and aquatic-dependent wildlife at Lakes Mead and Mohave and their relationships within the food web from members of lower trophic levels to the highest: phytoplankton, invertebrates, including zooplankton, and macroinvertebrates; fishes; and birds. The following sections describe the biological diversity, limiting factors, and ecological functions of these groups in Lake Mead, and to a lesser extent, in Lake Mohave.

Circular↗

USGS2010

Early invasion population structure of quagga mussel and associated benthic invertebrate community composition on soft sediment in a large reservoir

In 2007 an invasive dreissenid mussel species, Dreissena bugensis (quagga mussel), was discovered in Lake Mead reservoir (AZ–NV). Within 2 years, adult populations have spread throughout the lake and are not only colonizing hard substrates, but also establishing in soft sediments at depths ranging from 1 to >100 m. Dreissena bugensis size class and population density distribution differs between basins; cluster analysis revealed 5 adult cohorts within Boulder Basin and Overton Arm but low densities and low cohort survival in the Las Vegas Basin. Regression analysis suggests depth and temperature are not primary controllers of D. bugensis density in Lake Mead, indicating other factors such as sediment type, food availability or other resource competition may be important. Monthly veliger tows showed at least 2 major spawning events per year, with continuous presence of veligers in the water column. Adult mussels have been found in spawn or post-spawn condition in soft sediments in shallow to deep waters (>80 m) indicating the potential for reproduction at multiple depths. Comparisons to a 1986 benthic survey suggest there have been shifts in nondreissenid macroinvertebrate composition; however, it is unclear if this is due to D. bugensis presence. Current distribution of nondreissenid macroinvertebrates is heterogeneous in all 3 basins, and their biodiversity decreased when D. bugensis density was 2500/m 2 or greater.

Nevada;Arizona↗