USGS ScienceSearch

Geology topics

Scott Wright

Publications and source records attributed to Scott Wright.

At least 19 recordsLinked to original sources

A literature review and hypsometric analysis to support decisions on trout management flows on the Colorado River downstream from Glen Canyon Dam

Executive Summary Fish stranding has been studied in select rivers worldwide, often with the purpose of determining how to mitigate adverse effects of dam operations on highly valued salmon and trout populations. However, where a reduction in trout population size is desired by resource managers, as is the case downstream of the Glen Canyon Dam on the Colorado River, flow manipulations termed trout management flows (TMFs) may be used to optimize fish stranding and mortality. To inform the design and implementation of potential future TMFs, we reviewed relevant literature to identify key factors that influence fish stranding. We found that key factors were highly interdependent and site-specific, but general trends suggest that down-ramping (decreasing flow) at rapid rates in daytime during the late spring to summer emergence period would lead to stranding of age-0 rainbow trout in shallow shoreline habitat. A hypsometric analysis was then used to predict stranding risk for age-0 rainbow trout in Glen Canyon for a range of TMFs, which incorporated existing bathymetric data and flow and habitat suitability models. Our results indicate that a TMF with a steady high flow ranging from 12,000 to 16,000 cubic feet per second (ft 3 /s) combined with a minimum flow ranging from 3,000 to 5,000 ft 3 /s may effectively strand age-0 fish while also minimizing risk to water storage in Lake Powell and other resources. This strategy implemented under normal hydropeaking operations was predicted to lead to a substantive stranding risk when paired with low flows of 5,000 ft 3 /s, and especially 3,000 ft 3 /s. However, there remains uncertainty associated with elements of implementing an effective TMF downstream from Glen Canyon Dam. The main uncertainties include (1) the down-ramp rate that maximizes stranding of age-0 trout, (2) the duration of drawdown to maximize stranding mortality while minimizing impact to downstream resources, (3) duration of high flows required for age-0 fish to colonize newly created shoreline habitat (this is only for certain TMF hydrographs), (4) number of repetitions of TMF cycles to minimize compensatory survival response, and (5) recruitment threshold of both rainbow and brown trout populations to trigger TMF implementation.

Arizona

Sediment transport in two tributaries to the San Joaquin River immediately below Friant Dam—Cottonwood Creek and Little Dry Creek, California

Two tributaries to the greater San Joaquin River watershed, Cottonwood and Little Dry Creeks, in California’s Central Valley, were assessed for sediment and streamflow dynamics between October 1, 2011, and September 30, 2019. The two systems deliver sediment to the San Joaquin River below Friant Dam, California. Dams create downstream discontinuities in streamflow and sediment transport and therefore influence fish habitat and sediment dynamics. Because these two creeks are directly downriver from Friant Dam, they become the most upstream source of sediment to the San Joaquin River below Friant Dam. The quality and quantity of spawning habitat for fish in the gravel-bedded reach of the San Joaquin River relies on a range of bed material particle size suitable for redd structure. The effects of coarse-sand to fine-gravel supply on salmonid habitat depends primarily on the size of the sediment and the timing of its addition from tributaries to the San Joaquin River; thus, understanding the timing, quantity, and size of sediment supplied from these two tributaries is critical to the management of ecological and biological sustainability. Streamflow from Cottonwood and Little Dry Creeks, along with streamflow from the San Joaquin River below Friant Dam, were compared to continuously measured water-surface elevations to quantify the timing and direction of streamflow. Suspended-sediment samples were collected with multiple automatic samplers and analyzed for concentration and grain-size distribution. Measured suspended-sediment concentrations and streamflows were used to develop sediment rating curves and compute continuous estimates of suspended-sediment load for each tributary. Satellite imagery was used to qualify spatial and temporal dynamics through the lower watersheds and support more quantitative sediment-load estimates. Computed annual sediment loads ranged from 1.32x10 1 to 2.68x10 4 metric tons for Little Dry Creek and 9.82 to 1.98x10 3 metric tons for Cottonwood Creek. Sediment loads computed during the study period for both watersheds show that annual loads were highest during water year 2017 (October 1, 2016, to September 30, 2017). Sediment transport primarily occurred between the months of January and March. In both tributaries, grain-size distributions of suspended sediment were predominantly coarse-sized sand and were finer than the remnant bed material. Both creeks demonstrate backwater effects from the San Joaquin River, but the more tortuous stream channel and historical mining pits within Little Dry Creek provide more capacity for sediment storage compared to the less complex stream network of Cottonwood Creek. Because loads were computed based on upstream streamgages and not at the confluence of each tributary to the San Joaquin River, annual load estimates do not represent direct flux into the San Joaquin River; instead, these results indicated that in Little Dry Creek, particularly, the lowest portion of the watershed stores sediment before it reaches the San Joaquin River.

California

Storage capacity and sedimentation characteristics of Loch Lomond Reservoir, California, 2019

In May of 2019, Loch Lomond Reservoir was surveyed by the U.S. Geological Survey (USGS) in cooperation with the city of Santa Cruz to assess the current storage capacity and sedimentation rates in the reservoir. Survey methods combined sonar soundings to measure bathymetry and lidar scans with GPS data to measure near-shore topography and sediment bed samples to understand reservoir bed-material size. The survey data produced a bare-earth digital elevation model (DEM) of the reservoir at a resolution of 1 square meter or better to elevations at or above the reservoir spillway elevation, providing the coverage needed to estimate storage capacity. Additionally, the USGS compared the current survey to storage estimates from historical surveys—particularly the most recent survey in 2009—to evaluate storage capacity trends. Lastly, a hindcast estimate of scaled sediment yield using sediment yields from the San Lorenzo River (USGS station 11160500)—where the San Lorenzo River watershed encompasses the Loch Lomond Reservoir watershed—were used to compare indirect estimates of storage loss to direct storage loss. The 2019 survey resulted in a measured storage capacity of 8,770±50 acre-feet. The differences in storage between 2009 and 2019 varied substantially by depth. In shallow areas with depths less than 30 ft (at full reservoir), such as the very upstream end of the reservoir, storage loss (sediment deposition) dominated with a loss of about 68 acre-feet from 2009 to 2019. In areas deeper than 30 ft, persistent small storage gains over a wide range of depths totaled 82 acre-feet from 2009 to 2019. Storage loss estimates derived from estimated watershed sediment yields and reservoir characteristics were similar to storage losses computed from past surveys. This hindcasting produced an estimate of about 500 acre-feet of total storage loss for the history of the reservoir, or an average of about 8–9 acre-feet/year during the 60-year period. For the period 2009–2019, the hindcast produced an estimated total storage loss of 42 acre-feet, which is broadly consistent with the 68 acre-feet of storage loss computed for shallow areas based on the repeat surveys.

California

Self-limitation of sand storage in a bedrock-canyon river arising from the interaction of flow and grain size

Bedrock-canyon rivers tend to be supply limited because they are efficient transporters of sediment and not because the upstream supply of sediment is small. A byproduct of this supply limitation is that the finer alluvium stored in these rivers has shorter residence times and smaller volumes than in alluvial rivers. To improve our understanding of disequilibrium sediment transport and its effect on sand storage in bedrock-canyon rivers, we undertook a 20-year study, synthesized herein, of the Colorado River in Grand Canyon. Despite the large loads for which it was renowned, this river exhibited evidence of natural sand-supply limitation and became the perfect natural laboratory for studying sand transport in a bedrock canyon after upstream dam construction exacerbated this supply limitation. During our study, we made and analyzed an unprecedented ∼2.5 million measurements of the suspended and bed sediment. Results indicate that sand storage in this bedrock-canyon river is self-limiting owing to the physical controls of flow and grain size causing negative feedbacks that likely also operate in other bedrock-canyon rivers. Following episodic tributary floods that supply finer sand, sand migrates quickly downstream in the form of a wave in which large systematic changes in bed-sand grain size occur. These grain-size changes cause discharge-independent systematic changes in suspended-sand concentration in excess of a factor of 20. Although the tributary supply of sand increases the amount of sand storage, it also greatly increases the downstream sand transport by causing bed-sand fining, thus limiting the residence time and volume of sand storage.

Arizona

The future of sediment transport and streamflow under a changing climate and the implications for long-term resilience of the San Francisco Bay-Delta

Sedimentation and turbidity have effects on habitat suitability in the San Francisco Bay‐Delta (Bay‐Delta), concerning key species in the bay as well as the ability of the delta marshes to keep pace with sea level rise. A daily rainfall runoff and transport model of the Sacramento River Basin of northern California was developed to simulate streamflow and suspended sediment transport to the Bay‐Delta for the next century (water years, WY2010–2099). The model was calibrated to historical streamflow and sediment data and applied using 10 Global Climate Models with two representative concentration pathways (RCP) each for WY1980–2099 from the IPCC 5th Assessment Report. Results indicate average increases in peak streamflow of +58% and +66% for the RCP 4.5 and 8.5 ensembles, respectively, by mid‐century and +62 and +96% by end‐of‐century. Sediment loads increased by +39% and +69% by end‐of‐century. Suspended sediment concentrations (SSC) increased on average by +4.6% and +6.7% for RCP 4.5 and 8.5, respectively, by end‐of‐century. Individual scenario results varied, and statistically significant increasing trends of sediment loads to the Bay‐Delta were found for the RCP 4.5 and 8.5 ensembles and five individual scenarios. Increased suspended sediment loads may have negative effects such as contaminant transport but also have positive effects that help protect against sea level rise, increase turbidity and fish habitat, and sustain wetland habitats in the Bay‐Delta.

California

Causes of variability in suspended‐sand concentration evaluated using measurements in the Colorado River in Grand Canyon

Rivers commonly exhibit substantial variability in suspended‐sand concentration, even at constant water discharge. Here we derive an approach for evaluating how much of this variability arises from mean bed‐sand grain size. We apply this approach to the Colorado River in Grand Canyon, where discharge‐independent concentration of suspended sand varies by more than a factor of 23 ( N = 1.4 × 10 6 ). Theory predicts that where concentration is controlled by bed‐sand grain size, concentration and grain size in suspension will be inversely correlated (i.e., coarsening of the bed causes suspended sand to become coarser in grain size and lower in concentration). Although the observed correlation is negative, riverbed grain size accounts for only 40% of the variability in concentration. The residuals vary by an order of magnitude; they arise from other processes, such as changes in topography or distribution of sand that cause shear stress to change at constant discharge, changes in the fine tail of bed‐sand grain sizes or changing bedforms. Both bed sand and the other factors influence concentration for durations from less than 1 day to several years. Predictions of concentration based on bed‐sand grain size ( N = 4 × 10 4 ) are less accurate than predictions based on suspended‐sand grain size, probably because suspended sand is a natural integrator of sand‐transporting processes, giving more weight to those areas of the bed that exchange more sand with the flow. Although the causes of variability vary from one river to another, the approach illustrated here is applicable to any river in which concentration varies at constant water discharge.

Arizona

Storage capacity and sedimentation characteristics of the San Antonio Reservoir, California, 2018

The San Antonio Reservoir is a large water storage facility in Alameda County, California, and is a major component of the Hetch Hetchy Regional Water System (RWS). The RWS is a water-supply system owned and operated by the San Francisco Public Utilities Commission (SFPUC) and provides water for about 2.7 million people in the San Francisco, Santa Clara, Alameda, and San Mateo Counties. The San Antonio Reservoir is one of two RWS reservoirs in Alameda County and the third largest of the RWS reservoirs in the San Francisco Bay Area. The reservoir was formed by the James H. Turner Dam, which was completed in 1965. At the time of construction, the reservoir was estimated to have 50,500 acre-feet (acre-ft) of storage capacity. That early estimate was based on a 1963 pre-construction topographic map, which was drawn from aerial photographs. The capacity of the reservoir was later surveyed in 1994 and 2000. These two later surveys did not include the upper 18 feet (ft) of the reservoir, which represents roughly 30 percent of the overall storage volume. To determine the storage capacity and provide updated stage-capacity curves up to the spillway, the U.S. Geological Survey, in cooperation with the SFPUC, surveyed the bathymetry and shoreline of the reservoir in April 2018. The bathymetric survey was performed by making depth soundings using a boat-mounted, multibeam echosounder. At the time of the survey, the water level was between 13 and 14 ft below the spillway elevation. To measure capacity between the water line up to the spillway elevation, topography along most of the shoreline was surveyed from the boat using a terrestrial Light Detection and Ranging (LiDAR) scanner and in other areas by using ground-survey techniques. Location during bathymetric and topographic data collection was determined using a Global Navigation Satellite System-Real Time Network system. Vertical profiles of sound speed were collected periodically. The sound-speed profiles were used to spatially and temporally adjust the sound-speed calculations used to determine depth from the soundings. Approximately 125 kilometers (78 miles) of transects with a total of about 560 million depth soundings and topographic LiDAR points were collected (about 160 per square meter). In addition, approximately 500 topographic survey points were collected in shallow, wadable areas and on land near the upper reservoir area using a Global Navigation Satellite System receiver attached to a fixed length survey rod. Depth soundings, terrestrial LiDAR points, topographic survey points, and a digitized shoreline were merged and interpolated to generate a digital elevation model (DEM) of the reservoir. Gridded elevation data extracted from the DEM were then tabulated to determine total reservoir capacity and create reservoir stage-surface area and stage-storage capacity tables. Results of the reservoir capacity analysis indicated that the reservoir has 53,266 (plus or minus 140) acre-ft of storage capacity, which is an increase of 2,766 acre-ft (or 5.5 percent) greater than the original 1965 estimate; the increase is likely due to improved survey methods. Also, at the time of this 2018 survey, Intake #1 (the lowest intake) was not in operation. Intake #1 is estimated to be buried approximately 10 ft below the bed, whereas Intake #2 is about 20 ft above the bed. There are five intakes at different elevation levels; however, when consecutive lower intakes become inoperable due to sedimentation, the live storage capacity (capacity available for use) is reduced. At the time of this survey, the remaining live storage (above Intake #2) was approximately 52,363 acre-ft. The 2018 stage-capacity curve was compared to the original 1965 stage-capacity curve. Although overall, the changes indicate an increase in storage capacity, the change in volume at 372.7 ft North American Vertical Datum of 1988 (370 ft National Geodetic Vertical Datum of 1929, NGVD 29) shows a decrease of 733 acre-ft (the elevation of 370 ft NGVD 29 was used because it is the lowest elevation available for the 1965 stage-capacity curves). This finding agrees with the observed accumulation of sediment over Intake #1. That volume was converted to an annual sediment yield of 0.35 acre-ft per square mile (or 165 cubic meters per square kilometer), which is of the same order of magnitude as that found in other watersheds for the Coast Ranges in California. A decrease of 733 acre-ft between 1965 and 2018 thus represents a loss of 1.5 percent of the overall storage capacity in the reservoir. The updated stage-surface area and stage-capacity tables provided in this report and online ( https://doi.org/10.5066/P9KC9DU8 ) can be used by the SFPUC to improve reservoir operations and serve as an accurate baseline to monitor bathymetric changes in the future.

California

Water resources on Guam—Potential impacts of and adaptive response to climate change

The goals of this joint U.S. Geological Survey, University of Hawaiʻi, University of Guam, University of Texas, and East-West Center study were to (1) provide basic understanding about water resources for U.S. Department of Defense installations on Guam and (2) assess the resulting effect of sea-level rise and a changing climate on freshwater availability, on the basis of historic information, sea-level rise projections, and global-climate model temperature and rainfall projections. Downscaled regional climate models, informed by a multimodel ensemble of global climate models provided projections of future climate conditions for Guam. These projected climate conditions provided input to surface-water and groundwater models developed for Guam’s hydrology. Guam’s water resources in a future climate condition (2080–99) are projected to diminish relative to the recent climate condition. Projected average temperature increases, and average rainfall decreases will lead to reduced streamflow in southern Guam and reduced groundwater recharge to the Northern Guam Lens Aquifer (NGLA). Projected average temperatures in southern Guam will increase about 5.8 °F (3.22 °C), overall rainfall will decrease about 7 percent, and streamflow will consequently decrease 18 percent in important areas of southern Guam. Similarly, across the NGLA, future groundwater recharge will be 19 percent less than estimated recharge from 2012. Reduced future streamflow will decrease water availability from the Fena Valley Reservoir; however, the reservoir is expected to be able to supply water at recent demand rates without lowering the reservoir level to the elevation of the water-supply intakes throughout the simulated period of a future climate. A twelve-year simulation indicates that the reservoir can supply about twice the 2018 demand without lowering the reservoir level to the water-supply intakes. By following mitigation strategies to increase reservoir water availability, the withdrawal rate can be increased by 1.7 percent if the water-supply intakes are lowered 5 ft, by 3.5 percent if the spillway height is raised 5 ft, and by 5.3 percent if both strategies are combined. Higher sea level and reduced future recharge will decrease water availability from the NGLA. An index of composite chloride concentration from production wells increases to 300 milligrams per liter (mg/L) for future climate conditions and at 2010 withdrawal rates, compared with 130 mg/L under historic climate conditions. Most of this increase is due to reduced recharge as higher (+3.2 ft) sea level only has a small role in increasing withdrawn water salinity. A redistributed withdrawal scenario in which the composite chloride concentration is 290 mg/L offers only slight improvement. Should future droughts reduce recharge proportionally to the decreases observed during historic droughts, the composite concentration would be about 900 mg/L, and more than 70 percent of Guam’s production wells would produce water with a composite concentration greater than 500 mg/L. Potential mitigation strategies for increasing the potable yield of the NGLA in a future climate include reducing depths of deep production wells and reducing the withdrawal rates in selected wells projected to have higher chloride concentrations. Simulations show both strategies are effective in lowering the composite concentration of the withdrawn water.

Scientific Investigations Report

Dam effects on bedload transport on the upper Santa Ana River, California, and implications for native fish habitat

Dams disrupt the flow of water and sediment and thus have the potential to affect the downstream geomorphic characteristics of a river. Though there are some well‐known and common geomorphic responses to dams, such as bed armouring, the response downstream from any particular dam is dependent on local conditions. Herein, we investigate the response of the upper Santa Ana River in southern California, USA, to the construction of a large dam at the transition from mountains to valley, using calculations of bedload transport capacity on the mainstem below the dam and for major tributaries. Approximate sediment budgets were constructed for downstream reaches to estimate deposition and erosion rates for sand, gravel, and cobble particle sizes. Our results indicate that the classical response of bed armouring and erosion is likely limited to a short reach immediately below the dam. Farther downstream, though transport capacity is reduced by flow regulation by the dam, the channel reaches are likely to remain depositional but with reduced deposition rates. Persistent deposition, as opposed to erosion, is the result of the replenishment of flow and sediment supply by large downstream tributaries. In addition, the calculations indicate that the composition of the bed is unlikely to change substantially in downstream reaches. A Monte Carlo approach was employed to estimate the uncertainty in the sediment budget predictions. The impacts of the dam on the geomorphic character of the river downstream could have implications for native fish that rely on coarse substrate that supports their food base.

California

Turbidity current observations in a large reservoir following a major wildfire

Turbidity currents are generated when denser river water plunges and flows along the bottom of a lake, reservoir, or ocean. The plunging and downstream movement are driven by density differences due to temperature and/or suspended sediment, and currents have been observed to move slowly over long distances. This study presents observations of multiple turbidity currents in a large reservoir in California, United States, during runoff events following a major wildfire in the upstream watershed. Several aspects of the currents are documented and discussed, including the conditions leading to plunging, the vertical and longitudinal structure of turbidity within the currents, the velocity of the currents, and the development of a muddy lake upstream from an old submerged dam in the reservoir.

California

Field-scale sediment feed flume: Upper Santa Ana River, California

Along the San Bernardino Valley, the Santa Ana River decreases in slope, increases in width, and deposits particles from boulders to sand as it loses transport capacity. Episodic rainfalls feed very large winter floods, but dry summer and fall periods lead to extensive dry alluvial reaches due to surface water infiltration into subsurface aquifers. Within one of these dry reaches, a small inset channel has developed to effectively convey year-round wastewater discharges. This flow creates a coarse bed substrate composed of gravel and cobble that is home for diatoms and algae, the diet for the Santa Ana Sucker, a threatened native fish. Field-based observations include: • Shear stresses in the inset channel are capable of transporting sand as bedload, but not gravel and cobble. Bedload measurements (at several locations and times under wastewater discharge conditions) indicate that about 90% of the bedload is sand. The median grain size of bedload samples is consistently in the 0.5–1-mm range with little longitudinal variability. • The upstream supply of sand decreases through time as winnowing proceeds in the downstream direction. Bedload transport rates increase in the downstream direction by an order of magnitude over just 7 km, despite the fact that water discharge decreases downstream due to infiltration (typically by 25–50% over the 7-km reach). • The location of the gravel-to-sand bed transition is variable from year to year and is related to the amount of time that has elapsed since the most recent upstream runoff event. These events supply new sediment to the reach and reset the winnowing process. • Direct observations of the inset channel following upstream runoff events revealed many instances of large areas of substantial sand deposition in the channel, in areas that were previously entirely gravel and cobble sizes. We propose a qualitative function to predict the bed substrate of the inset channel at any given time and location. A one-dimensional model of bedload transport and bed substrate in the study reach is being developed to quantify and test the predictive function. Preliminary results indicate that the winnowing process is quite sensitive to wastewater discharge levels. The calibrated model will be used to assess how treatment plant discharge scenarios might be used to strategically manage winnowing rates and the amount of gravel and cobble exposed on the bed in the reach.

California

Refining the Baseline Sediment Budget for the Klamath River, California

Four dams in the Klamath River Hydroelectric Project (KHP) in Oregon and California (Figure 1) are currently scheduled to be removed over a period of a few weeks or months, beginning in January 2021. The Klamath dam removal will be the largest in the world by almost all measures, and is an unprecedented opportunity to advance science of river responses to such events. The KHP contains approximately 10-12 million cubic meters of mostly fine sediment and model estimates suggest approximately 1/3-2/3 of this volume is expected to be eroded from reservoirs. Much of this sediment is expected to be eventually transported by the river to, or through, the Klamath River Estuary, a distance of more than 300 kilometers. To improve the success of restoration activities following dam removal, agencies must understand the baseline conditions for biological, chemical, and physical processes, prior to the removal. We expect large changes in water quality (turbidity, suspended sediment, dissolved oxygen, temperature, and algal toxins) and in fish habitat in the Hydroelectric Reach and the main-stem of the Klamath River to the ocean. For example, modeled sediment concentrations in the Klamath River during dam removal were estimated exceed 10,000 – 15,000 mg/L, depending on streamflows, location, and the dam removal process, and to remain > 100 – 1000 mg/L for months at a time. Final time to achieve background concentrations post dam removal may take over two years (Reclamation, 2011). Plans to assess many of these changes post-dam removal are still being formulated.

California, Oregon

Physical characteristics of the lower San Joaquin River, California, in relation to white sturgeon spawning habitat, 2011–14

The U.S. Fish and Wildlife Service confirmed that white sturgeon ( Acipenser transmontanus ) recently spawned in the lower San Joaquin River, California. Decreases in the San Francisco Bay estuary white sturgeon population have led to an increased effort to understand their migration behavior and habitat preferences. The preferred spawning habitat of other white sturgeon (for example, those in the Columbia and Klamath Rivers) is thought to be areas that have high water velocity, deep pools, and coarse bed material. Coarse bed material (pebbles and cobbles), in particular, is important for the survival of white sturgeon eggs and larvae. Knowledge of the physical characteristics of the lower San Joaquin River can be used to preserve sturgeon spawning habitat and lead to management decisions that could help increase the San Francisco Bay estuary white sturgeon population. Between 2011 and 2014, the U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service, assessed selected reaches and tributaries of the lower river in relation to sturgeon spawning habitat by (1) describing selected spawning reaches in terms of habitat-related physical characteristics (such as water depth and velocity, channel slope, and bed material) of the lower San Joaquin River between its confluences with the Stanislaus and Merced Rivers, (2) describing variations in these physical characteristics during wet and dry years, and (3) identifying potential reasons for these variations. The lower San Joaquin River was divided into five study reaches. Although data were collected from all study reaches, three subreaches where the USFWS collected viable eggs at multiple sites in 2011–12 from Orestimba Creek to Sturgeon Bend were of special interest. Water depth and velocity were measured using two different approaches—channel cross sections and longitudinal profiles—and data were collected using an acoustic Doppler current profiler. During the first year of data collection (water year 2011), runoff was greatest, and gaged streamflow, measured as discharge, peaked at 875 cubic meters per second in the lower San Joaquin River. Also during that year, water velocity was generally between 0.6 and 0.9 meters per second, and depth was typically between 2.5 and 4.5 meters, but water depth exceeded 6 meters in several pools. Water year 2011 was classified as a “ wet ” year. Later water years were classified as either “ dry ” (water year 2012) or “ critical ” (water years 2013 and 2014). During the drier years, water was shallower, and velocities were slower. The streambed aggraded in several areas during the study. At Sturgeon Bend, for example, which had the deepest pool measured in 2011 (maximum depth was 14 meters), about 8 meters of sediment was deposited by 2014. The bed of the lower San Joaquin River was predominately sand, except in areas downstream from the mouth of Del Puerto Creek. A large amount of sand, gravel, and cobble was deposited at the mouth of Del Puerto Creek, and in the 9.5 kilometers downstream from the mouth of Del Puerto Creek, we encountered several gravel bars and patches of gravel-size (8–64 millimeters) bed material. Del Puerto and Orestimba Creeks drain from the Coast Ranges on the west side of the river. Only small quantities of gravel-size bed material were observed in the reach downstream from Orestimba Creek, indicating Orestimba Creek does not deliver much coarse sediment to the lower San Joaquin River. Del Puerto Creek appeared to be the primary source of gravels suitable for white sturgeon spawning in the lower San Joaquin River, and thus, it is important for the long-term spawning success of sturgeon in the San Joaquin River.

California

Calculation of in situ acoustic sediment attenuation using off-the-shelf horizontal ADCPs in low concentration settings

The use of “off-the-shelf” acoustic Doppler velocity profilers (ADCPs) to estimate suspended sediment concentration and grain-size in rivers requires robust methods to estimate sound attenuation by suspended sediment. Theoretical estimates of sediment attenuation require a priori knowledge of the concentration and grain-size distribution (GSD), making the method impractical to apply in routine monitoring programs. In situ methods use acoustic backscatter profile slope to estimate sediment attenuation, and are a more attractive option. However, the performance of in situ sediment attenuation methods has not been extensively compared to theoretical methods. We used three collocated horizontally mounted ADCPs in the Fraser River at Mission, British Columbia and 298 observations of concentration and GSD along the acoustic beams to calculate theoretical and in situ sediment attenuation. Conversion of acoustic intensity from counts to decibels is influenced by the instrument noise floor, which affects the backscatter profile shape and therefore in situ attenuation. We develop a method that converts counts to decibels to maximize profile length, which is useful in rivers where cross-channel acoustic profile penetration is a fraction of total channel width. Nevertheless, the agreement between theoretical and in situ attenuation is poor at low concentrations because cross-stream gradients in concentration, sediment size or GSD can develop, which affect the backscatter profiles. We establish threshold concentrations below which in situ attenuation is unreliable in Fraser River. Our results call for careful examination of cross-stream changes in suspended sediment characteristics and acoustic profiles across a range of flows before in situ attenuation methods are applied in river monitoring programs.

Water Resources Research

Bed-material characteristics of the Sacramento–San Joaquin Delta, California, 2010–13

The characteristics of bed material at selected sites within the Sacramento–San Joaquin Delta, California, during 2010–13 are described in a study conducted by the U.S. Geological Survey in cooperation with the Bureau of Reclamation. During 2010‒13, six complete sets of samples were collected. Samples were initially collected at 30 sites; however, starting in 2012, samples were collected at 7 additional sites. These sites are generally collocated with an active streamgage. At all but one site, a separate bed-material sample was collected at three locations within the channel (left, right, and center). Bed-material samples were collected using either a US BMH–60 or a US BM–54 (for sites with higher stream velocity) cable-suspended, scoop sampler. Samples from each location were oven-dried and sieved. Bed material finer than 2 millimeters was subsampled using a sieving riffler and processed using a Beckman Coulter LS 13–320 laser diffraction particle-size analyzer. To determine the organic content of the bed material, the loss on ignition method was used for one subsample from each location. Particle-size distributions are presented as cumulative percent finer than a given size. Median and 90th-percentile particle size, and the percentage of subsample mass lost using the loss on ignition method for each sample are also presented in this report.

California

Daily reservoir sedimentation model: Case study from the Fena Valley Reservoir, Guam

A model to compute reservoir sedimentation rates at daily timescales is presented. The model uses streamflow and sediment load data from nearby stream gauges to obtain an initial estimate of sediment yield for the reservoir’s watershed; it is then calibrated to the total deposition calculated from repeat bathymetric surveys. Long-term changes to reservoir trapping efficiency are also taken into account. The model was applied to the Fena Valley Reservoir, a water supply reservoir on the island of Guam. This reservoir became operational in 1951 and was recently surveyed in 2014. The model results show that the highest rate of deposition occurred during two typhoons (Typhoon Alice in 1953 and Typhoon Tingting in 2004); each storm decreased reservoir capacity by approximately 2–3% in only a few days. The presented model can be used to evaluate the impact of an extreme event, or it can be coupled with a watershed runoff model to evaluate potential impacts to storage capacity as a result of climate change or other hydrologic modifications.

Journal of Hydraulic Engineering

Recent advances in understanding flow dynamics and transport of water-quality constituents in the Sacramento–San Joaquin River Delta

This paper, part of the collection of research comprising the State of Bay–Delta Science 2016, describes advances during the past decade in understanding flow dynamics and how water-quality constituents move within California’s Sacramento– San Joaquin River Delta (Delta). Water-quality constituents include salinity, heat, oxygen, nutrients, contaminants, organic particles, and inorganic particles. These constituents are affected by water diversions and other human manipulations of flow, and they greatly affect the quantity and quality of benthic, pelagic, and intertidal habitat in the Delta. The Pacific Ocean, the Central Valley watershed, human intervention, the atmosphere, and internal biogeochemical processes are all drivers of flow and transport in the Delta. These drivers provide a conceptual framework for presenting recent findings. The tremendous expansion of acoustic and optical instruments deployed in the Delta over the past decade has greatly improved our understanding of how tidal variability affects flow and transport. Sediment is increasingly viewed as a diminishing resource needed to sustain pelagic habitat and tidal marsh, especially as sea level rises. Connections among the watershed, Delta, and San Francisco Bay that have been quantified recently highlight that a landscape view of this system is needed, rather than consideration of each region in isolation. We discuss interactions of multiple drivers and information gaps.

California

Characterizing changes in streamflow and sediment supply in the Sacramento River Basin, California, using hydrological simulation program—FORTRAN (HSPF)

A daily watershed model of the Sacramento River Basin of northern California was developed to simulate streamflow and suspended sediment transport to the San Francisco Bay-Delta. To compensate for sparse data, a unique combination of model inputs was developed, including meteorological variables, potential evapotranspiration, and parameters defining hydraulic geometry. A slight decreasing trend of sediment loads and concentrations was statistically significant in the lowest 50% of flows, supporting the observed historical sediment decline. Historical changes in climate, including seasonality and decline of snowpack, contribute to changes in streamflow, and are a significant component describing the mechanisms responsible for the decline in sediment. Several wet and dry hypothetical climate change scenarios with temperature changes of 1.5 °C and 4.5 °C were applied to the base historical conditions to assess the model sensitivity of streamflow and sediment to changes in climate. Of the scenarios evaluated, sediment discharge for the Sacramento River Basin increased the most with increased storm magnitude and frequency and decreased the most with increases in air temperature, regardless of changes in precipitation. The model will be used to develop projections of potential hydrologic and sediment trends to the Bay-Delta in response to potential future climate scenarios, which will help assess the hydrological and ecological health of the Bay-Delta into the next century.

California