USGS Science⌕ Search

Geology topics

Robert L. Hoffman

Publications and source records attributed to Robert L. Hoffman.

16 recordsLinked to original sources
USGS2012

Aquatic organism passage at road-stream crossings—synthesis and guidelines for effectiveness monitoring

Restoration and maintenance of passage for aquatic organisms at road-stream crossings represents a major management priority, involving an investment of hundreds of millions of dollars (for example, U.S. Government Accounting Office, 2001). In recent years, passage at hundreds of crossings has been restored, primarily by replacing barrier road culverts with bridges or stream simulation culverts designed to pass all species and all life stages of aquatic life and simulate natural hydro-geomorphic processes (U.S. Forest Service, 2008). The current situation has motivated two general questions: 1. Are current design standards for stream simulation culverts adequately re-establishing passage for aquatic biota? and 2. How do we monitor and evaluate effectiveness of passage restoration? To address the latter question, a national workshop was held in March 2010, in Portland, Oregon. The workshop included experts on aquatic organism passage from across the nation (see table of participants, APPENDIX) who addressed four classes of methods for monitoring effectiveness of aquatic organism passage—individual movement, occupancy, demography, and genetics. This report has been written, in part, for field biologists who will be undertaking and evaluating the effectiveness of aquatic organism passage restoration projects at road-stream crossings. The report outlines basic methods for evaluating road-stream crossing passage impairment and restoration and discusses under what circumstances and conditions each method will be useful; what questions each method can potentially answer; how to design and implement an evaluation study; and points out the fundamental reality that most evaluation projects will require special funding and partnerships among researchers and resource managers. The report is organized into the following sections, which can be read independently: 1. Historical context: In this section, we provide a brief history of events leading up to the present situation involving aquatic organism passage as a useful context for the issues covered herein. 2. Importance of connectivity for aquatic organisms: In this section, we provide background information regarding the movement characteristics of aquatic organisms and their vulnerability to passage impairment, and the importance of connectivity for a broad diversity of aquatic vertebrates and invertebrates. This section should be useful for practitioners in selecting what species to monitor in relation to aquatic organism passage. 3. Methods for evaluating aquatic organism passage: In this section, we present a range of perspectives on alternatives for assessing and monitoring aquatic organism passage impairment and the effectiveness of passage restoration actions, including the following methods: Individual Movement, Occupancy Models, Abundance (Demography), and Molecular Genetic Markers. 4. Relevance, strengths, and limitations of the four methods: In this section, we discuss the utility of each of the methods as a tool for assessing and quantifying passage impairment and restoration effectiveness. 5. Guidelines for selecting a method: In this section, we review some fundamental criteria and guidelines to consider when selecting a method for monitoring in the context of answering three important questions that should be addressed when developing a plan for evaluating aquatic organism passage. 6. Study and monitoring design considerations: In this section, we discuss four key design elements that need to be considered when developing a monitoring design for assessing passage impairment and restoration. The basic objectives of the report are to: 1. Review the movement characteristics of five groups of aquatic organisms that inhabit streams and to assess their general vulnerability to passage impairment at road-stream crossings; 2. Review four methods for monitoring aquatic organism passage impairment and the effectiveness of actions to restore passage at road-stream crossing structures; 3. Assess the relevance, strengths, and limitations of each method as a monitoring tool; 4. Identify and discuss guidelines that will be useful for selecting a monitoring method; and 5. Discuss what we have identified as the four key elements that need to be considered when developing a monitoring design for assessing passage impairment and restoration at road-stream crossings.

Open-File Report↗
USGS2010

Fix success and accuracy of GPS radio collars in old-growth temperate coniferous forests

Global Positioning System (GPS) telemetry is used extensively to study animal distribution and resource selection patterns but is susceptible to biases resulting from data omission and spatial inaccuracies. These data errors may cause misinterpretation of wildlife habitat selection or spatial use patterns. We used both stationary test collars and collared free-ranging American black bears ( Ursus americanus ) to quantify systemic data loss and location error of GPS telemetry in mountainous, old-growth temperate forests of Olympic National Park, Washington, USA. We developed predictive models of environmental factors that influence the probability of obtaining GPS locations and evaluated the ability of weighting factors derived from these models to mitigate data omission biases from collared bears. We also examined the effects of microhabitat on collar fix success rate and examined collar accuracy as related to elevation changes between successive fixes. The probability of collars successfully obtaining location fixes was positively associated with elevation and unobstructed satellite view and was negatively affected by the interaction of overstory canopy and satellite view. Test collars were 33% more successful at acquiring fixes than those on bears. Fix success rates of collared bears varied seasonally and diurnally. Application of weighting factors to individual collared bear fixes recouped only 6% of lost data and failed to reduce seasonal or diurnal variation in fix success, suggesting that variables not included in our model contributed to data loss. Test collars placed to mimic bear bedding sites received 16% fewer fixes than randomly placed collars, indicating that microhabitat selection may contribute to data loss for wildlife equipped with GPS collars. Horizontal collar errors of >800 m occurred when elevation changes between successive fixes were >400 m. We conclude that significant limitations remain in accounting for data loss and error inherent in using GPS telemetry in coniferous forest ecosystems and that, at present, resource selection patterns of large mammals derived from GPS telemetry should be interpreted cautiously.

Washington↗
USGS2010

The effects of simulated solar UVB radiation on early developmental stages of the Northwestern Salamander (Ambystoma gracile) from three lakes

Solar ultraviolet radiation (UV) has received much attention as a factor that could play a role in amphibian population declines. UV can be hazardous to some amphibians, but the resultant effects depend on a variety of environmental and behavioral factors. In this study, the potential effects of UV on the Northwestern Salamander, Ambystoma gracile , from three lakes were assessed in the laboratory using a solar simulator. We measured the survival of embryos and the survival and growth of larvae exposed to four UV treatments in controlled laboratory studies, the UV absorbance of egg jelly, oviposition depths in the lakes, and UV absorbance in water samples from the three lakes. Hatching success of embryos decreased in the higher UV treatments as compared to the control treatments, and growth of surviving larvae was significantly reduced in the higher UVB irradiance treatments. The egg jelly exhibited a small peak of absorbance within the UVB range (290–320 nm). The magnitude of UV absorbance differed among egg jellies from the three lakes. Oviposition depths at the three sites averaged 1.10 m below the water surface. Approximately 66% of surface UVB radiation was attenuated at 10-cm depth in all three lakes. Results of this study indicate that larvae may be sensitive to UVB exposure under laboratory conditions; however, in field conditions the depths of egg deposition in the lakes, absorbance of UV radiation by the water column, and the potential for behavioral adjustments may mitigate severe effects of UV radiation.

Washington↗
USGS2008

Interaction between introduced trout and larval salamanders (Ambystoma macrodactylum) in high-elevation lakes

The larval stage of the long-toed salamander ( Ambystoma macrodactylum ) is the top vertebrate predator in high-elevation fishless lakes in the North Cascades National Park Service Complex, Washington (U.S.A.). Although most of these high-elevation lakes were naturally fishless, trout have been stocked in many of them. We sought to determine the effects of physicochemical factors and introduced trout on abundance and behavior of A. macrodactylum larvae. Larval salamander densities were estimated by snorkeling. Snorkelers carefully searched through substrate materials within 2 m of the shoreline and recorded the number of larvae observed and if larvae were hidden in benthic substrates. Physicochemical factors were measured in each lake on the same day that snorkel surveys were conducted. In fishless lakes, larval salamander densities were positively related to total Kjeldahl-N concentration and negatively related to lake elevation. Crustacean zooplankton, especially cladocerans, were important food resources for larval A. macrodactylum . Crustacean zooplankton and cladoceran densities were positively related to total Kjeldahl-N, suggesting that increased food resources contributed to increased densities of larval A. macrodactylum . Differences in larval salamander densities between fish and fishless lakes were related to total Kjeldahl-N concentrations and the reproductive status of trout. Mean larval salamander densities for fishless lakes with total Kjeldahl-N < 0.045 mg/L were not significantly different from mean larval densities in lakes with reproducing trout or in lakes with nonreproducing trout. In fishless lakes with total Kjeldahl-N ≥ 0.045 mg/L, however, mean larval densities were significantly higher than in lakes with reproducing trout where fish reached high densities. In fishless lakes with total Kjeldahl-N ≥ 0.095 mg/L, mean larval densities were significantly higher than in lakes with nonreproducing trout where trout fry were stocked at low densities. Reduced larval salamander densities in lakes with trout likely resulted from trout predation. There were no significant differences in the percentage of larvae hidden in benthic substrates between fishless lakes and lakes with fish. Our results imply that assessment of the effects of fish on amphibians requires an understanding of natural abiotic and biotic factors and processes influencing amphibian distribution and abundance.

Washington↗
USGS2008

NCCN Mountain Lakes Monitoring Strategy: Guidelines to Resolution

The North Coast and Cascades Network (NCCN) Inventory and Monitoring Program provides funds to its Network Parks to plan and implement the goals and objectives of the National Park Services? (NPS) Inventory and Monitoring (I&M) Program. The primary purpose of the I&M program is to develop and implement a long-term monitoring program in each network. The purpose of this document is to describe the outcome of a meeting held to find solutions to obstacles inhibiting development of a unified core design and methodology for mountain lake monitoring.

Open-File Report↗
USGS2007

Thermal, chemical, and optical properties of Crater Lake, Oregon

Crater Lake covers the floor of the Mount Mazama caldera that formed 7700 years ago. The lake has a surface area of 53 km 2 and a maximum depth of 594 m. There is no outlet stream and surface inflow is limited to small streams and springs. Owing to its great volume and heat, the lake is not covered by snow and ice in winter unlike other lakes in the Cascade Range. The lake is isothermal in winter except for a slight increase in temperature in the deep lake from hyperadiabatic processes and inflow of hydrothermal fluids. During winter and spring the water column mixes to a depth of about 200–250 m from wind energy and convection. Circulation of the deep lake occurs periodically in winter and spring when cold, near-surface waters sink to the lake bottom; a process that results in the upwelling of nutrients, especially nitrate-N, into the upper strata of the lake. Thermal stratification occurs in late summer and fall. The maximum thickness of the epilimnion is about 20 m and the metalimnion extends to a depth of about 100 m. Thus, most of the lake volume is a cold hypolimnion. The year-round near-bottom temperature is about 3.5°C. Overall, hydrothermal fluids define and temporally maintain the basic water quality characteristics of the lake (e.g., pH, alkalinity and conductivity). Total phosphorus and orthophosphate-P concentrations are fairly uniform throughout the water column, where as total Kjeldahl-N and ammonia-N are highest in concentration in the upper lake. Concentrations of nitrate-N increase with depth below 200 m. No long-term changes in water quality have been detected. Secchi disk (20-cm) clarity varied seasonally and annually, but was typically highest in June and lowest in August. During the current study, August Secchi disk clarity readings averaged about 30 m. The maximum individual clarity reading was 41.5 m in June 1997. The lowest reading was 18.1 m in July 1995. From 1896 (white-dinner plate) to 2003, the average August Secchi disk reading was about 30 m. No long-term changes in the Secchi disk clarity were observed. Average turbidity of the water column (2–550 m) between June and September from 1991 to 2000 as measured by a transmissometer ranged between 88.8% and 90.7%. The depth of 1% of the incident solar radiation during thermal stratification varied annually between 80 m and 100 m. Both of these measurements provided additional evidence about the exceptional clarity of Crater Lake.

Oregon↗
USGS2007

Fish movement ecology in high gradient headwater streams: Its relevance to fish passage restoration through stream culvert barriers

Restoration of fish passage through culvert barriers has emerged as a major issue in the Pacific Northwest and nationwide, in part, because of their potential influence on fish movement. Movement is an essential mechanism by which mobile animals acquire the resources necessary for the successful completion of their life-cycles. In this report, we provide a brief review of some essential characteristics of animal movement and examples from a focal group of fishes in Washington State: salmon, trout, and char. We begin by outlining some basic characteristics of animal movement and then apply that foundation to the case of salmonid fishes. Next we consider the consequences of disrupting fish movement with human-constructed barriers, such as culverts. Finally, this body of evidence is summarized, and we propose a short list of what we view as high priority information needs to support more effective restoration of fish passage through culverts.

Open-File Report↗
USGS2005

Sampling protocol for monitoring abiotic and biotic characteristics of mountain ponds and lakes

This document describes field techniques and procedures used for sampling mountain ponds and lakes. These techniques and procedures will be used primarily to monitor, as part of long-term programs in National Parks and other protected areas, the abiotic and biotic characteristics of naturally occurring permanent montane lentic systems up to 75 ha in surface area. However, the techniques and procedures described herein also can be used to sample temporary or ephemeral montane lentic sites. Each Standard Operating Procedure (SOP) section addresses a specific component of the limnological investigation, and describes in detail field sampling methods pertaining to parameters to be measured for each component.

Techniques and Methods↗
USGS2003

Habitat segregation of Ambystoma gracile and Ambystoma macrodactylum in mountain ponds, Mount Rainer National Park, Washington, USA

Ambystoma gracile (Baird) and Ambystoma macrodactylum Baird are common salamander species occupying key trophic positions in mountain ponds and lakes of Mount Rainier National Park (MORA). Based on amphibian surveys conducted in ponds and lakes in the northeast quadrant of MORA during the summers of 1993a??1995, 20 sites were resampled in 1996 to document and evaluate distributions of the two species relative to site habitat characteristics. Distributions of larvae were assessed either by nearshore snorkel or visual encounter surveys of each study site. Twelve environmental variables representing pond and lake physical characteristics, water quality, and nutrient concentrations were measured. The occurrences at each site of three major habitat components (i.e., pond bottom firmness, coarse woody debris, and emergent/aquatic vegetation) were qualitatively estimated. Allotopic distributions of larval populations of both species were related to site elevation, maximum depth, organic content of bottom substrates, and surface area. Ambystoma gracile sites were larger, deeper, lower in elevation, had flocculent sediment higher in organic content, abundant coarse woody debris, and limited emergent/aquatic vegetation relative to A. macrodactylum sites. Ambystoma macrodactylum sites were smaller, shallower, higher in elevation, had firm sediments low in organic content, and had a greater occurrence of emergent/aquatic vegetation than did A. gracile sites. Two sites supported syntopic populations and exhibited many of the habitat characteristics observed at sites inhabited by each species. The distribution of each species in MORA was related to the interconnection between habitat characteristics of ponds and lakes and species life-history patterns and possibly interspecific interactions.

Washington↗
USGS2002

Persistence of an unusual pelagic zooplankton assemblage in a clear, mountain lake

The planktonic zooplankton assemblage in Mowich Lake, Mount Rainier National Park (MORA), was composed almost entirely of rotifers in 1966 and 1967. Adult pelagic crustacean taxa were rare. Their paucity was attributed to predation by kokanee salmon (Oncorhynchus nerka), which had been stocked in 1961. During a park-wide survey of 24 lakes in 1988, Mowich Lake was the only one that did not contain at least one planktonic crustacean species. Given the apparent persistence of the unusual pelagic zooplankton assemblage in Mowich Lake, the first objective of this study was to document the interannual variation in the taxonomic structure of the zooplankton assemblages in the lake from 1988 through 1999. A second objective was to determine if it was possible to predict the taxonomic composition of the pelagic crustacean zooplankton assemblage in Mowich Lake prior to the stocking of kokanee salmon. The Mowich Lake zooplankton assemblages in 1988-1999 were consistent with those in 1966 and 1967. Crustacean taxa were extremely rare, but they included most of the primary taxa collected from 23 MORA lakes surveyed in 1988. Nonetheless, the 1988 collections showed that the September rotifer assemblage in Mowich Lake was similar to 10 of the 24 lakes sampled. Seven of the 10 lakes were dominated by cladocerans, primarily Daphnia rosea and Holopedium gibberum. Therefore, it appeared that either one or both of these species may have numerically dominated the crustacean zooplankton assemblage in the lake prior to 1961.

Hydrobiologia↗
USGS2002

Observations of the distributions of five fish species in a small Appalachian stream

The notion has been growing that resident stream fishes exhibit a greater capacity for movement than was previously thought. In this study, we recorded the distributions of four resident fish species (longnose dace Rhinichthys cataractae , blacknose dace R. atratulus , mottled sculpin Cottus bairdi , and rainbow trout Oncorhynchus mykiss ) and one nonresident species (central stoneroller Campostoma anomalum ) in Rock Creek, a small tributary of Cosby Creek in Great Smoky Mountains National Park, over the period 1979-1995. During this study, 1,998 individuals of resident species were collected from stream sections considered to be within a common area of distribution for each species. Forty-five individuals of resident and nonresident species were captured upstream of these areas, and eight of these fish were considered to be larger than individuals considered typical for each species. Small mammal dispersal theory concepts were used to classify and describe fish movements outside of common areas of distribution. These movements were identified as important in maintaining population connectivity within stream drainages, contributing to reducing the potential for local extinctions of populations and to the recolonization of unoccupied habitats. This study highlights the need for continued study of fish movements in stream drainages and for development of appropriate resource management strategies based partly on the spatial dynamics of fish populations and communities.

Cosby Creek, Rock Creek↗
USGS2002

Abundances of northwestern salamander larvae in montane lakes with and without fish, Mount Rainier National Park, Washington

In Mount Rainier National Park, the northwestern salamander usually inhabits relatively large and deep lakes and ponds (average size = 0.3 ha; average depth > 2 m) that contain flocculent, organic bottom sediments and abundant coarse wood. Prior to 1970, salmonids were introduced into many of the park's lakes and ponds that were typical habitat of the northwestern salamander. The objective of this study was to compare, in lakes and ponds with suitable habitat characteristics for northwestern salamanders, the observed abundances of larvae in takes and ponds with and without these introduced salmonids. Day surveys of 61 lakes were conducted between 1993 and 1999. Fish were limited to takes and ponds deeper than 2 in. For the 48 lakes and ponds deeper than 2 in (i.e., 25 fishless lakes and 23 fish lakes), the mean and median observed abundances of northwestern salamander larvae in fishless lakes and ponds was significantly greater than the mean and median observed abundances of larvae in lakes and ponds with fish. Northwestern salamander larvae were not observed in 11 fish lakes. These lakes were similar in median elevation, surface area, and maximum depth to the fishless lakes. The 12 fish lakes with observed larvae were significantly lower in median elevation, larger in median surface area, and deeper in median maximum depth than the fishless lakes. Low to null observed abundances of northwestern salamander larvae in lakes and ponds with fish were attributed to a combination of fish predation of larvae and changes in larval behavior.

Northwest Science↗
USGS1998

Phytoplankton assemblages in high-elevation lakes in the northern Cascade Mountains, Washington State, USA

Phytoplankton assemblages in high-elevation lakes of North Cascades National Park Service Complex were studied during the open-water period in 1989. Collectively, 93 taxa were identified in 55 samples from 51 lakes. Based on cell densities, cyanobacteria had the highest relative abundance (36.7 %), followed by chlorophytes (29.8 %), and chrysophytes (19.6 %). Aphanocapsa delicatissima had the highest proportional abundance (14.0 %). Only 15.1 % percent of the taxa occurred in more than 20 samples. Phytoplankton cell densities increased following a gradient of increasing lake-water temperature, alkalinity, and concentration of total Kjeldahl-N with decreasing lake elevation. Chrysophytes and cyanobacteria were quantitatively (relative abundance) the most important taxa in alpine and subalpine lakes, whereas cyanobacteria had the highest relative abundances in high-forest and low-forest lakes. Chlorophytes had their highest relative abundance in high-forest lakes. Although low in relative abundance, diatoms and dinoflagellates were most abundant in alpine lakes. An ordination by correspondence analysis indicated that most alpine, subalpine, and high-forest lakes had similar floras. Although a few subalpine lakes exhibited deviations from this pattern, the main differences in phytoplankton composition were found in a group of low-forest and high-forest lakes. Canonical correspondence analysis (CCA) provided evidence that the distribution of samples and taxa in ordination space was correlated with a gradient of decreasing lake elevation and increasing water temperature, alkalinity, and concentration of nitrogen. When CCA was used to examine relationships among phytoplankton taxa and vegetation zones, a continuous distribution of taxa was found from the low-forest zone to the subalpine zone, with a large number of taxa occurring primarily in the subalpine and high-forest zones. Three phytoplankton taxa occurred primarily in alpine lakes, whereas five taxa co-occurred in alpine, subalpine, and high forest zones. Collectively, lake elevation and associated changes in water quality and concentrations of nutrients, especially nitrogen, appeared to be the primary physical and chemical factors influencing the taxonomic structures of phytoplankton assemblages.

Washington↗
USGS1997

Using mark-recapture methods to estimate fish abundance in small mountain lakes

The majority of lacustrine fish populations in the western USA are located far from the nearest road. Although mark-recapture techniques are widely accepted for estimating population abundance, these techniques have been broadly ignored for fisheries surveys in remote mountain lakes because of restricted access and associated logistical constraints. In this study, mark recapture experiments were used to estimate fish population abundance in nine small (< 7 ha) lakes of the North Cascades National Park Service Complex. Fish in the mark sample were collected by angling, fin-clipped, and immediately released; fish were recaptured with variable mesh monofilament gill nets. A single-census Petersen estimator was used to calculate abundance in each lake, and assumptions for unbiased estimates appeared to be satisfied in most cases. Post-release mortality of angler-captured fish was low. The small size of these lakes in conjunction with the brief period of rime allotted for each individual experiment apparently reduced the probability of unequal vulnerability and mortality for marked and unmarked fish. Single-census mark-recapture experiments appeared to provide reasonable estimates of population abundance in these mountain lakes. Resulting estimates furnish a substantial increase in information when compared to more ubiquitous assessments of relative abundance, but the logistical requirements are modest. We believe that this technique may useful for survey purposes in other small, remote lakes.

Northwest Science↗
USGS1996

Distribution of nearshore macroinvertebrates in lakes of the Northern Cascade Mountains, Washington, USA

During the summer of 1949 studies were conducted at Princeton, New Jersey, to determine the effects on wildlife of DDT used in the control of Dutch elm disease. Direct mortality was determined by intensive search for dead birds after spraying. Twenty-six songbirds, one bat, and one gray squirrel were found. Of 11 dead birds from a study area of approximately 20 acres only one was an adult. Songbird populations were determined by censuses before and after spraying on a study area and on a similar unsprayed check area. The number of all breeding birds showed a 19.6 percent decrease on both the study and check areas during the week immediately following spraying. About two weeks after spraying the population in the treated area began to increase and within another week was back to prespray level. When only those species common to both sprayed and unsprayed areas are considered a population decline of 22 percent was measured in the sprayed area while the check area showed a 6 percent increase in numbers over the same period. Nestling mortality was studied in both areas. Among 18 young found on the study area during and following spraying 8 (44%) survived. Death of two broods of catbirds occurred four days after spraying. Of 21 young found on the check area 15 (71%) survived.

Archiv fur Hydrobiologie↗