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Laurence E. Schemel

Publications and source records attributed to Laurence E. Schemel.

At least 19 recordsLinked to original sources
USGS2013

Climate variability in an estuary: Effects of riverflow on San Francisco Bay

A simple conceptual model of estuarine variability in the context of climate forcing has been formulated using up to 65 years of estimated mean-monthly delta flow, the cumulative freshwater flow to San Francisco Bay from the Sacramento-San Joaquin River, and salinity observations near the mouth, head, mid-estuary, and coastal ocean. Variations in delta flow, the principal source of variability in the bay, originate from anomalous changes in northern and central California streamflow, much of which is linked to anomalous winter sea level pressure (“CPA”) in the eastern Pacific. In years when CPA is strongly negative, precipitation in the watershed is heavy, delta flow is high, and the bay's salinity is low; similarly, when CPA is strongly positive, precipitation is light, delta flow is low, and the bay's salinity is high. Thus the pattern of temporal variability in atmospheric pressure anomalies is reflected in the streamflow, then in delta flow, then in estuarine variability. Estuarine salinity can be characterized by river to ocean patterns in annual cycles of salinity in relation to delta flow. Salinity (total dissolved solids) data from the relatively pristine mountain streams of the Sierra Nevada show that for a given flow, one observes higher salinities during the rise in winter flow than on the decline. Salinity at locations throughout San Francisco Bay estuary are also higher during the rise in winter flow than the decline (because it takes a finite time for salinity to fully respond to changes in freshwater flow). In the coastal ocean, however, the annual pattern of sea surface salinity is reversed: lower salinities during the rise in winter flow than on the decline due to effects associated with spring upwelling. Delta flow in spring masks these effects of coastal upwelling on estuarine salinity, including near the mouth of the estuary and, in fact, explains in a statistical sense 86 percent of the variance in salinity at the mouth of the estuary. Some of the variations in residual salinity in the bay not explained by delta flow appear to correlate with variability in coastal ocean properties. Interestingly CPA correlates also with anomalous sea surface salinity in the coastal ocean adjacent to the bay, especially in spring (albeit through a different mechanism than streamflow). For instance, when the atmospheric pressure anomaly as indicated for streamflow is high, the coastal ocean upper-layer Ekman transport is probably in the offshore direction resultingin higher sea surface salinities along the coast (with a phase lag). This circulation corresponds, in direction, to density driven estuarine circulation. In contrast a low atmospheric pressure regime leads to an onshore surface transport, and therefore opposes estuarine circulation. The influence of variations in delta flow on estuarine/phytoplankton/biochemical dynamics can be illustrated with numerical simulation models. For example, when riverflow is high the resulting low estuarine water residence time limits phytoplankton biomass and the observed effects of phytoplankton productivity on estuarine biochemistry are minimal. When riverflow is low but suspended sediment concentrations are high, light becomes a more important factor limiting phytoplankton biomass than residence time and effects of phytoplankton productivity on estuarine biochemistry are also minimal. When both riverflow and suspended sediment concentrations are low, phytoplankton biomass increases and phytoplankton productivity emerges as a major control on estuarine biochemistry: phytoplankton activity draws down and maintains very low ambient concentrations of dissolved silica and partial pressures of carbon dioxide (shifting pH to higher values). However, after an extended period of very low delta flow the major controls on estuarine biochemistry appear to change, possibly because benthic exchange processes (both sources and sinks) strengthen as salinity rises and benthic filter-feeding invertebrates migrate upstream with increasing salinity.

Book chapter↗
USGS2007

Formation of mixed Al-Fe colloidal sorbent and dissolved-colloidal partitioning of Cu and Zn in the Cement Creek - Animas River Confluence, Silverton, Colorado

Transport and chemical transformations of dissolved and colloidal Al, Fe, Cu and Zn were studied by detailed sampling in the mixing zone downstream from the confluence of Cement Creek (pH 4.1) with the Animas River (pH 7.6). Complete mixing resulted in circumneutral pH in the downstream reach of the 1300 m study area. All four metals were transported through this mixing zone without significant losses to the streambed, and they exhibited transformations from dissolved to colloidal forms to varying degrees during the mixing process. Nearly all of the Al formed colloidal hydrous Al oxides (HAO) as pH increased (4.8–6.5), whereas colloidal hydrous Fe oxides (HFO) were supplied by Cement Creek as well as formed in the mixing zone primarily at higher pH (>6.5). The short travel time through the mixing zone (approx. 40 min) and pH limited the formation of HFO from dissolved Fe 2+ supplied by Cement Creek. Although the proportions of HAO and HFO varied as the streams mixed, the colloidal sorbent typically was enriched in HAO relative to HFO by a factor of 1.5–2.1 (by mole) in the pH range where dissolved-to-colloidal partitioning of Cu and Zn was observed. Model simulations of sorption by HFO (alone) greatly underestimated the dissolved-to-colloidal partitioning of Zn. Previous studies have shown that HAO–HFO mixtures can sorb greater amounts of Zn than HFO alone, but the high Zn-to-sorbent ratio in this mixing zone could also account for greater partitioning. In contrast to Zn, comparisons with model simulations did not show that Cu sorption was greater than that for HFO alone, and also indicated that sorption was possibly less than what would be expected for a non-interactive mixture of these two sorbents. These field results for Cu, however, might be influenced by (organic) complexation or other factors in this natural system. Laboratory mixing experiments using natural source waters (upstream of the confluence) showed that the presence of HFO in the mixed sorbent resulted in greater Cu partitioning than for HAO alone, and that the effect was greater with increasing (mole fraction) HFO. This was consistent with field results that showed greater Cu sorption when additional HFO was formed in the downstream reach of the mixing zone. Further research is needed to identify the significance of surface-related mechanisms specific to HAO–HFO mixtures that could affect the partitioning of Cu in natural systems.

Colorado↗
USGS2007

Floodwater chemistry in the Yolo Bypass during winter and spring, 1998

A preliminary investigation of temporal and spatial variations in floodwater chemistry was conducted during winter and spring 1998 in the Yolo Bypass floodplain of the Sacramento River system. Samples were collected at locations along the eastern margin of the floodplain over the duration of the study and across the floodplain during major periods of inundation. Specific conductance and dissolved organic carbon concentrations along the eastern margin of the Yolo Bypass varied inversely with discharge. The Sacramento River was the greatest source of discharge to the floodplain during major periods of inundation. Increases in specific conductance and dissolved organic carbon were observed along the eastern margin during periods of lower discharge, when local streams accounted for a significant fraction of the total discharge through the Yolo Bypass. Apparent influences of local stream discharges also were observed in surface waters near the western margin of the floodplain during major periods of inundation. Although river and local stream sources of suspended particulate matter appeared important, in-floodplain processes were likely contributors to temporal and spatial variability in concentrations. Values for the C:N ratio of the particulate matter were lowest during periods of decreasing and low discharge through the floodplain, indicating production of phytoplankton in floodplain waters or supply to the floodplain by local stream sources. Phytoplankton discharged from the Yolo Bypass was detected by chlorophyll a monitors downstream in the Sacramento River during this study.

Open-File Report↗
USGS2007

Chemical and hydrologic data from the Cement Creek and upper Animas River confluence and mixing zone, Silverton, Colorado, September 1997

Cement Creek, an acidic tributary, discharges into the circum-neutral Animas River (pH>7) in Silverton, Colorado located in the high-elevation San Juan Mountains. Mixing of Animas River water with acidic metal rich Cement Creek water raises water pH and produces metal precipitates. This report presents selected anion, cation, chloride, and sulfate data along with hydrologic data highlighting the mixing of these streams during the low-flow period in late summer 1997.

Colorado↗
USGS2005

Descriptions of the Animas River-Cement Creek confluence and mixing zone near Silverton, Colorado, during the late summers of 1996 and 1997

Acidic waters from Cement Creek discharge into the circum-neutral Animas River in a high-elevation region of the San Juan Mountains near Silverton, Colorado. Cement Creek is acidic and enriched in metals and sulfate because it is fed by discharges from abandoned mines and natural mineral deposits. Mixing with the Animas River raises the pH and produces precipitates of iron and aluminum (oxy)hydroxides, which in turn can adsorb other metals. This confluence was studied in 1996 and 1997 to better understand mixing and sorption processes which are common during the neutralization of acidic streams. The photographs in this report show flow braiding and other features that influenced the way the two streams mixed during the late summers of the two years. They also show 'banding' due to incomplete mixing and 'opalescence' due to chemical reactions and the formation of colloidal-size particles in the mixing zone.

Colorado↗
USGS2003

Salinity and temperature in South San Francisco Bay, California, at Dumbarton Bridge: Results from the 1999-2002 water years and an overview of previous data

Salinity and temperature were measured in near-surface waters at Dumbarton Bridge in South San Francisco Bay during the 1999–2002 water years (1999WY–2002WY). The complete data set from this site, which included 1990WY–1993WY and 1995WY–1998WY, provided a time–series of observations covering a wide range of hydrologic conditions. These conditions included critically dry years and years with above-normal and near–record precipitation and discharges from the major rivers and local streams. Data collection at 15–minute intervals allowed resolution of variability associated with daily tides and other short-term phenomena. Both local stream discharges to South San Francisco Bay and Sacramento–San Joaquin River discharges to North San Francisco Bay affected salinity at Dumbarton Bridge. Salinity at Dumbarton Bridge varied with the daily tides, and the lowest salinity values (annual) coincided with precipitation and freshwater inflows usually in winter. Short–term and seasonal variations in temperature at Dumbarton Bridge typically followed changes in air temperature and solar irradiance.

California↗
USGS2002

Supporting data for hydrologic studies in San Francisco Bay, California: Meteorological measurements at the Port of Redwood City during 1998-2001

Meteorological data were collected during 1998-2001 at the Port of Redwood City, California, to support hydrologic studies in South San Francisco Bay. The measured meteorological variables were air temperature, atmospheric pressure, quantum flux (insolation), and four parameters of wind speed and direction: scalar mean horizontal wind speed, (vector) resultant horizontal wind speed, resultant wind direction, and standard deviation of the wind direction. Hourly mean values based on measurements at five-minute intervals were logged at the site. Daily mean values were computed for temperature, infolation, pressure, and scalar wind speed. Daily mean values for 1998-2001 are described in this report, and a short record of hourly mean values is compared to data from another near-by station. Data (hourly and daily mean) from the entire period of record (starting in April 1992) and reports describing data prior to 1998 are provided.

California↗
USGS2002

Hydrology and chemistry of floodwaters in the Yolo Bypass, Sacramento River system, California, during 2000

Discharges to and floodwaters in the Yolo Bypass were sampled during winter and spring, 2000. The primary purpose of the study was to link changes in water quality in the Yolo Bypass to inflows from the Sacramento River (over Fremont Weir) and from four local streams that discharge to the west side of the floodplain. Specific conductance, chloride, sulfate, dissolved inorganic nutrients, dissolved organic carbon, particulate carbon and nitrogen, suspended particulate matter (mass), and selected dissolved metals were measured in most of the samples. When the Sacramento River was spilling over Fremont Weir, the water chemistry in the Yolo Bypass was very similar to that in the river except along the western margin of the floodplain where influences of local stream inflow were evident. When flow over Fremont Weir stopped, floodwaters drained from the Yolo Bypass, and the local streams were the major discharges as the floodwaters receded eventually to the perennial channel along the eastern margin of the floodplain. After the initial draining of the floodplain, chemical concentrations at sites along the perennial channel showed strong influences of inflows from Cache Creek and Ridge Cut, which are sources of nutrients and contaminants that are potentially hazardous to wildlife. Runoff from spring storms increased flow in the perennial channel and flushed accumulated nutrients and organic matter to the tidal river. Releases of freshwater to the perennial channel might be beneficial in maintaining habitat quality for aquatic species during the dry seasons.

California↗
USGS2001

California's Yolo Bypass: Evidence that flood control can be compatible with fisheries, wetlands, wildlife, and agriculture

Unlike conventional flood control systems that frequently isolate rivers from ecologically-essential floodplain habitat, California's Yolo Bypass has been engineered to allow Sacramento Valley floodwaters to inundate a broad floodplain. From a flood control standpoint, the 24,000 ha leveed floodplain has been exceptionally successful based on its ability to convey up to 80% of the flow of the Sacramento River basin during high water events. Agricultural lands and seasonal and permanent wetlands within the bypass provide key habitat for waterfowl migrating through the Pacific Flyway. Our field studies demonstrate that the bypass seasonally supports 42 fish species, 15 of which are native. The floodplain appears to be particularly valuable spawning and rearing habitat for the splittail (Pogonichthys macrolepidotus), a federally-listed cyprinid, and for young chinook salmon (Oncorhynchus tshawytscha), which use the Yolo Bypass as a nursery area. The system may also be an important source to the downstream food web of the San Francisco Estuary as a result of enhanced production of phytoplankton and detrital material. These results suggest that alternative flood control systems can be designed without eliminating floodplain function and processes, key goals of the 1996 Draft AFS Floodplain Management Position Statement.

California↗
USGS2001

Simplified conversions between specific conductance and salinity units for use with data from monitoring stations

The U.S. Geological Survey, Bureau of Reclamation, and the California Department of Water Resources maintain a large number of monitoring stations that record specific conductance, often referred to as “electrical conductivity,” in San Francisco Bay Estuary and the Sacramento-San Joaquin Delta. Specific conductance units that have been normalized to a standard temperature are useful in fresh waters, but conversion to salinity units has some considerable advantages in brackish waters of the estuary and Delta. For example, salinity is linearly related to the mixing ratio of freshwater and seawater, which is not the case for specific conductance, even when values are normalized to a standard temperature. The Practical Salinity Scale 1978 is based on specific conductance, temperature, and pressure measurements of seawater and freshwater mixtures (Lewis 1980 and references therein). Equations and data that define the scale make possible conversions between specific conductance and salinity values. This article presents a simplified conversion to salinity units for use with specific conductance data from monitoring stations that have been normalized to a standard temperature of 25 °C and an equation for the reverse calculation. Although these previously undocumented methods have been shared with many IEP agencies over the last two decades, the sources of the equations and data are identified here so that the original literature can be accessed.

Interagency Ecological Program Newsletter↗
USGS1997

Dissolved nutrient data for the San Francisco Bay Estuary, California, January through November 1995

The U.S. Geological Survey conducted hydrologic investigations in San Francisco Bay between January and November of 1995. Dissolved inorganic plant nutrients, nitrate, nitrite, ammonium, silica, and reactive phosphorus were measured in surface and in near-bottom waters at previously established locations in the channel portions of both northern and southern reaches of the bay, and at shallow water stations in the southern reach. This report presents the sampling and analytical methods and the data from these studies. Measured salinity values for the nutrient samples are also reported. Data on the variability due to sampling and sample handling procedures, and on the precision of the analytical methods are also presented.

California↗
USGS1995

Seasonal/yearly salinity variations in San Francisco Bay

The ability of resource agencies to manage fish, wildlife and freshwater supplies of San Francisco Bay estuary requires an integrated knowledge of the relations between the biota and their physical environment. A key factor in these relations is the role of salinity in determining both the physical and the biological character of the estuary. The saltiness of the water, and particularly its seasonal and interannual patterns of variability, affects which aquatic species live where within the estuary. Salinity also determines where water can and cannot be diverted for human consumption and irrigated agriculture, and plays a role in determining the capacity of the estuary to cleanse itself of wastes. In short, salinity is a fundamental property of estuarine physics and chemistry that, in turn, determines the biological characteristics of each estuary. Freshwater is a major control on estuarine salinity. Most freshwater supplied to the Bay is from river flow through the Delta, which is primarily runoff from the Sierra Nevada. Most contaminants in San Francisco Bay are from the Sacramento/San Joaquin Valley and the local watershed around the Bay rather than the sea or atmosphere. Land is the primary source of freshwater and freshwater serves as a tracer of land-derived substances such as the trace metals (copper, lead and selenium), pesticides and plant nutrients (nitrate and phosphate). The U.S. Geological Survey is collaborating with other agencies and institutions in studying San Francisco Bay salinity using field observations and numerical simulations to define the physical processes that control salinity. The issues that arise from salinity fluctuations, however, differ in the northern and southern parts of the bay. In North Bay we need to know how salinity responds to freshwater flow through the Sacramento/San Joaquin Delta; this knowledge will benefit water managers who determine how much delta flow is needed a) to protect freshwater supplies for municipal water use and b) modulate salinity for a healthy estuary. In South Bay we need to know where the freshwater comes from (the distant Delta or local streams) to sort out the sources of a) contamination or b) dilution.

California↗
USGS1995

Benthic macrofauna data for San Francisco Bay, California, September 1986

Benthic macrofauna were collected during September 1986 to evaluate locations for long-term monitoring stations as part of the U.S. Geological Survey Regional Effects Monitoring Program in San Francisco Bay, California. Three to ten replicate samples were collected with a modified Van Veen sampler (0.05 m 2 area) at ten locations. One box core sample (0.06 m 2 area) was collected at seven to the ten locations. Six of the box core samples were split into an upper 10 cm sample and a deeper sample before analysis. Macrofauna specimens were identified to the lowest possible taxon, usually genus and species, then counted. An average of 88 percent of the benthic macrofauna specimens were identified to the species level. The fraction identified varied among stations from 54 to 98 percent. Nematodes and oligochaetes accounted for most of the unidentified specimens. Relative to the total number of species identified in five replicates at each location, an average of 90 percent of the species were collected with three replicates. In general, species with high to moderate abundances were present in all replicates, and species collected only after three or more replicates averaged less than one specimen per replicate. Results from the box cores showed that the dominant species were most abundant in the upper 10 cm, the depth of sediment that can be adequately sampled with a modified Van Veen sampler. On the basis of the number of species and their abundances at each location, seven of the ten locations were selected for sampling in the regular program, which began in March 1987.

California↗
USGS1995

Measurements of salinity, temperature, and tides in south San Francisco Bay, California, at Dumbarton Bridge: 1990-93 water years

The U.S. Geological Survey measures salinity, temperature, and water levels (tides) in southern San Francisco Bay at Dumbarton Bridge as part of a cooperative program with the California State Department of Water Resources. During water years 1990-93, measurements were made at 15-minute intervals with electonic sensors located approximately one meter above the substrate in approximately six meters of water (at mean water level). During March and April of 1991 and 1992, salinity and temperature also were measured with a self-contained system floating one meter below the surface of the water. Sections of the data set were selected to illustrate influences of tidal currents, weather events, and seasonal and interannual variations in climate on salinity, temperature, and water levels at this location. The edited data are provided on high-density disks in comma-delimited, ASCII text files.

California↗
USGS1995

Supporting data for hydrologic studies in San Francisco Bay, California: Meteorological measurements at the Port of Redwood City during 1992-1994

Meteorological data were collected during 1992-94 at the Port of Redwood City, California, to support hydrologic studies in southern San Francisco Bay. The meteorological variables that were measured were air temperature, atmospheric pressure, quantum flux (insolation), and four parameters of wind speed and direction: scalar mean horizontal wind speed, (vector) resultant horizontal wind speed, resultant wind direction, and standard deviation of the wind direction. Hourly mean values based on measurements at five-minute intervals were logged at the site, then transferred to a portable computer monthly. Daily mean values were computed for temperature, insolation, pressure, and scalar wind speed. Hourly- mean and daily-mean values are presented in time- series plots and daily variability and seasonal and annual cycles are described. All data are provided in ASCII files on an IBM-formatted disk. Observations of temperature and wind speed at the Port of Redwood City were compared with measurements made at the San Francisco International Airport. Most daily mean values for temperature agreed within one- to two-tenths of a degree Celsius between the two locations. Daily mean wind speeds at the Port of Redwood City were typically half the values at the San Francisco International Airport. During summers, the differences resulted from stronger wind speeds at the San Francisco International Airport occurring over longer periods of each day. A comparison of hourly wind speeds at the Palo Alto Municipal Airport with those at the Port of Redwood City showed that values were similar in magnitude.

California↗