Geology topics

Joshua M. Hull

Publications and source records attributed to Joshua M. Hull.

10 recordsLinked to original sources

USGS2023

Wildfire immediately reduces nest and adult survival of greater sage-grouse

Wildfire events are becoming more frequent and severe on a global scale. Rising temperatures, prolonged drought, and the presence of pyrophytic invasive grasses are contributing to the degradation of native vegetation communities. Within the Great Basin region of the western U.S., increasing wildfire frequency is transforming the ecosystem toward a higher degree of homogeneity, one dominated by invasive annual grasses and declining landscape productivity. Greater sage-grouse ( Centrocercus urophasianus ; hereafter sage-grouse) are a species of conservation concern that rely on large tracts of structurally and functionally diverse sagebrush ( Artemisia spp.) communities. Using a 12-year (2008–2019) telemetry dataset, we documented immediate impacts of wildfire on demographic rates of a population of sage-grouse that were exposed to two large wildfire events (Virginia Mountains Fire Complex—2016; Long Valley Fire—2017) near the border of California and Nevada. Spatiotemporal heterogeneity in demographic rates were accounted for using a Before-After Control-Impact Paired Series (BACIPS) study design. Results revealed a 40% reduction in adult survival and a 79% reduction in nest survival within areas impacted by wildfires. Our results indicate that wildfire has strong and immediate impacts to two key life stages of a sagebrush indicator species and underscores the importance of fire suppression and immediate restoration following wildfire events.

California, Nevada↗

USGS2022

To catch a (marsh) predator: Modified trapping methods for breeding and wintering Northern Harriers (Circus hudsonius)

Although there are a variety of methods available for trapping raptors, some species, such as Northern Harriers ( Circus hudsonius ), are not easily captured with standard methods. We tested several existing trapping methods and modified two of them based on Northern Harrier ecology and behavior across seasons in a study population in California. No previously successful methods described in the literature were effective for our study population. Two modified methods were most effective for trapping Northern Harriers: (1) placing two dho-gazas around the nest in a V-shape and flushing the adult female into the nets during the breeding season, and (2) using remote-triggered bow nets baited with waterbird carcasses in winter. Dho-gazas at the nest worked well during the early nestling-rearing stage, when nestlings were younger than 2 wk old and adult females were most attentive. This method was not suitable during the incubation stage because Northern Harriers are prone to nest abandonment. In the winter, Northern Harriers are known to scavenge, yet this aspect of their behavioral ecology has previously been rarely exploited for trapping purposes. These two methods allow for selective Northern Harrier trapping across seasons and provide modified options for research on this understudied and declining species in North America.

California↗

USGS2020

Isolation and characterization of microsatellite loci in merlins (Falco columbarius) and cross-species amplification in gyrfalcons (F. rusticolus) and peregrine falcons (F. peregrinus)

I. Background: Merlins, Falco columbarius, breed throughout temperate and high latitude habitats in Asia, Europe, and North America. Like peregrine falcons, F. peregrinus, merlins underwent population declines during the mid-to-late 20th century, due to organochlorine-based contamination, and have subsequently recovered, at least in North American populations. II. Methods and Results: To better understand levels of genetic diversity and population structuring in contemporary populations and to assess the impact of the 20th century decline, we used genomic data archived in public databases and constructed genomic libraries to isolate and characterize a suite of 17 microsatellite markers for use in merlins. We also conducted cross-amplification experiments to determine the markers’ utility in peregrine falcons and gyrfalcons, F. rusticolus. III. Conclusions: These markers provide a valuable addition to marker suites that can be used to determine individual identity and conduct genetic analyses on merlins and congeners.

Molecular Biology Reports↗

USGS2019

Feather mercury concentrations in North American raptors sampled at migration monitoring stations

We assessed total mercury (THg) concentrations in breast feathers of diurnal North American raptors collected at migration monitoring stations. For 9 species in the Pacific Flyway, we found species and age influenced feather THg concentrations whereas sex did not. Feather THg concentrations µg/g dry weight (dw) averaged (least-squared mean±standard error) higher for raptors that generally consume >75% avian prey (sharp-shinned hawk Accipiter striatus: n=113; 4.35±0.45 µg/g dw, peregrine falcon Falco peregrinus: n=12; 3.93±1.11 µg/g dw, Cooper’s hawk Accipiter cooperii: n=20; 2.35±0.50 µg/g dw, and merlin Falco columbarius: n=59; 1.75±0.28 µg/g dw) than for raptors that generally consume <75% avian prey (northern harrier Circus hudsonius: n=112; 0.75±0.10 µg/g dw, red-tailed hawk Buteo jamaicensis: n=109; 0.56±0.06 µg/g dw, American kestrel Falco sparverius: n=16; 0.57±0.14 µg/g dw, prairie falcon Falco mexicanus: n=10; 0.41±0.13 µg/g dw) except for red-shouldered hawks Buteo lineatus: n=10; 1.94±0.61 µg/g dw. Feather THg concentrations spanning 13-years (2002-2014) in the Pacific Flyway differed among 3 species, where THg increased for juvenile northern harrier, decreased for adult red-tailed hawk, and showed no trend for adult sharp-shinned hawk. Mean feather THg concentrations in juvenile merlin were greater in the Mississippi Flyway (n=56; 2.14±0.18 µg/g dw) than those in the Pacific Flyway (n=49; 1.15±0.11 µg/g dw) and Intermountain Flyway (n=23; 1.14±0.16 µg/g dw), and Atlantic Flyway (n=38; 1.75±0.19 µg/g dw) averaged greater than the Pacific Flyway. Our results indicate that raptor migration monitoring stations provide a cost-effective sampling opportunity for biomonitoring environmental contaminants within and between distinct migration corridors and across time.

Ecotoxicology↗

USGS2018

Ground-nesting great horned owl in Suisun Marsh, California

Great horned owls (Bubo virginianus) are widespread throughout North, Central, and parts of South America (Artuso et al. 2013). Across this range, great horned owls are generalists, occupying a diverse range of habitats including deciduous and coniferous forests, wetlands, and agricultural landscapes. Within these habitats, great horned owls are generally found near upland or short-vegetation habitat suitable for locating prey (Artuso et al. 2013). In Suisun Marsh, California, great horned owls primarily occupy stands of non-native eucalyptus (Eucalyptus spp.), as well as man-made structures like waterfowl-nesting platforms (Figure 1) and on dock pilings over water (Figure 2), and they forage in nearby upland fields and seasonally flooded, diked wetlands managed primarily for waterfowl (USGS unpublished data).

California↗

USGS2017

Lessons from the past: isotopes of an endangered rail as indicators of underlying change to tidal marsh habitats

Introduction: Tidal marsh systems along the Pacific coast of the United States have experienced substantial stress and loss of area and ecosystem function, which we examined by using the endangered California Ridgway’s Rail, Rallus obsoletus obsoletus (‘rail’) as an indicator of its tidal marsh habitat in the San Francisco Estuary. We organized a collection of historical (1885-1940) and modern (2005-2014) rail feathers and analyzed the feather isotope means for delta carbon (δ 13 C), sulfur (δ 34 S), and nitrogen (δ 15 N) by region and time period. Outcomes: Feather isotopes represented the primary foraging habitat during historical then modern time periods. Neither individual nor regional rail feather isotopes suggested freshwater or terrestrial foraging by the rail. Three regions with both historic and modern feather isotopes revealed non-uniform spatial shifts in isotope levels consistent with a marine based food web and significant δ 15 N enrichment. Discussion: Our results supported the rail’s status as a generalist forager and obligate tidal marsh species throughout the historic record. The variable isoscape trends generated from feather isotope means illustrated a modern loss of the isotopic homogeneity between regions of historical tidal marsh, which correlated with spatially-explicit habitat alterations such as increasing biological invasions and sewage effluent over time. Conclusion: These findings have reinforced the importance of tidal marsh conservation in the face of ongoing underlying changes to these important ecosystems.

California↗

USGS2016

A century of landscape disturbance and urbanization of the San Francisco Bay region affects the present-day genetic diversity of the California Ridgway’s rail (Rallus obsoletus obsoletus)

Fragmentation and loss of natural habitat have important consequences for wild populations and can negatively affect long-term viability and resilience to environmental change. Salt marsh obligate species, such as those that occupy the San Francisco Bay Estuary in western North America, occupy already impaired habitats as result of human development and modifications and are highly susceptible to increased habitat loss and fragmentation due to global climate change. We examined the genetic variation of the California Ridgway’s rail ( Rallus obsoletus obsoletus ), a state and federally endangered species that occurs within the fragmented salt marsh of the San Francisco Bay Estuary. We genotyped 107 rails across 11 microsatellite loci and a single mitochondrial gene to estimate genetic diversity and population structure among seven salt marsh fragments and assessed demographic connectivity by inferring patterns of gene flow and migration rates. We found pronounced genetic structuring among four geographically separate genetic clusters across the San Francisco Bay. Gene flow analyses supported a stepping stone model of gene flow from south-to-north. However, contemporary gene flow among the regional embayments was low. Genetic diversity among occupied salt marshes and genetic clusters were not significantly different. We detected low effective population sizes and significantly high relatedness among individuals within salt marshes. Preserving genetic diversity and connectivity throughout the San Francisco Bay may require attention to salt marsh restoration in the Central Bay where habitat is both most limited and most fragmented. Incorporating periodic genetic sampling into the management regime may help evaluate population trends and guide long-term management priorities.

California↗

USGS2016

Endangered species management and ecosystem restoration: Finding the common ground

Management actions to protect endangered species and conserve ecosystem function may not always be in precise alignment. Efforts to recover the California Ridgway’s Rail ( Rallus obsoletus obsoletus ; hereafter, California rail), a federally and state-listed species, and restoration of tidal marsh ecosystems in the San Francisco Bay estuary provide a prime example of habitat restoration that has conflicted with species conservation. On the brink of extinction from habitat loss and degradation, and non-native predators in the 1990s, California rail populations responded positively to introduction of a non-native plant, Atlantic cordgrass ( Spartina alterniflora ). California rail populations were in substantial decline when the non-native Spartina was initially introduced as part of efforts to recover tidal marshes. Subsequent hybridization with the native Pacific cordgrass ( Spartina foliosa ) boosted California rail populations by providing greater cover and increased habitat area. The hybrid cordgrass ( S. alterniflora × S. foliosa ) readily invaded tidal mudflats and channels, and both crowded out native tidal marsh plants and increased sediment accretion in the marsh plain. This resulted in modification of tidal marsh geomorphology, hydrology, productivity, and species composition. Our results show that denser California rail populations occur in invasive Spartina than in native Spartina in San Francisco Bay. Herbicide treatment between 2005 and 2012 removed invasive Spartina from open intertidal mud and preserved foraging habitat for shorebirds. However, removal of invasive Spartina caused substantial decreases in California rail populations. Unknown facets of California rail ecology, undesirable interim stages of tidal marsh restoration, and competing management objectives among stakeholders resulted in management planning for endangered species or ecosystem restoration that favored one goal over the other. We have examined this perceived conflict and propose strategies for moderating harmful effects of restoration while meeting the needs of both endangered species and the imperiled native marsh ecosystem.

California↗

USGS2015

Movements of radio-marked California Ridgway's rails during monitoring surveys: Implications for population monitoring

The California Ridgway's rail Rallus obsoletus obsoletus (hereafter California rail) is a secretive marsh bird endemic to tidal marshes in the San Francisco Bay (hereafter bay) of California. The California rail has undergone significant range contraction and population declines due to a variety of factors, including predation and the degradation and loss of habitat. Call-count surveys, which include call playbacks, based on the standardized North American marsh bird monitoring protocol have been conducted throughout the bay since 2005 to monitor population size and distribution of the California rail. However, call-count surveys are difficult to evaluate for efficacy or accuracy. To measure the accuracy of call-count surveys and investigate whether radio-marked California rails moved in response to call-count surveys, we compared locations of radio-marked California rails collected at frequent intervals (15 min) to California rail detections recorded during call-count surveys conducted over the same time periods. Overall, 60% of radio-marked California rails within 200 m of observers were not detected during call-count surveys. Movements of radio-marked California rails showed no directional bias ( P = 0.92) irrespective of whether or not playbacks of five marsh bird species (including the California rail) were broadcast from listening stations. Our findings suggest that playbacks of rail vocalizations do not consistently influence California rail movements during surveys. However, call-count surveys may underestimate California rail presence; therefore, caution should be used when relating raw numbers of call-count detections to population abundance.

Journal of Fish and Wildlife Management↗

USGS2010

Population structure and plumage polymorphism: the intraspecific evolutionary relationships of a polymorphic raptor, Buteo jamaicensis harlani

Background Phenotypic and molecular genetic data often provide conflicting patterns of intraspecific relationships confounding phylogenetic inference, particularly among birds where a variety of environmental factors may influence plumage characters. Among diurnal raptors, the taxonomic relationship of Buteo jamaicensis harlani to other B. jamaicensis subspecies has been long debated because of the polytypic nature of the plumage characteristics used in subspecies or species designations. Results To address the evolutionary relationships within this group, we used data from 17 nuclear microsatellite loci, 430 base pairs of the mitochondrial control region, and 829 base pairs of the melanocortin 1 receptor ( Mc1r ) to investigate molecular genetic differentiation among three B. jamaicensis subspecies ( B. j. borealis , B. j. calurus , B. j. harlani ). Bayesian clustering analyses of nuclear microsatellite loci showed no significant differences between B. j. harlani and B. j. borealis . Differences observed between B. j. harlani and B. j. borealis in mitochondrial and microsatellite data were equivalent to those found between morphologically similar subspecies, B. j. borealis and B. j. calurus , and estimates of migration rates among all three subspecies were high. No consistent differences were observed in Mc1r data between B. j. harlani and other B. jamaicensis subspecies or between light and dark color morphs within B. j. calurus , suggesting that Mc1r does not play a significant role in B. jamaicensis melanism. Conclusions These data suggest recent interbreeding and gene flow between B. j. harlani and the other B. jamaicensis subspecies examined, providing no support for the historical designation of B. j. harlani as a distinct species.

BMC Evolutionary Biology↗