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Jonathan D. Cook

Publications and source records attributed to Jonathan D. Cook.

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Structured decision-making workshop: Chronic wasting disease management in free-ranging cervids in Massachusetts

This document describes the results of a 2.5-day rapid decision prototype workshop that evaluated management activities for chronic wasting disease (CWD) in Massachusetts (MA) that were either proactive (i.e., actions taken prior to CWD arrival/detection) or reactive (i.e., actions taken after CWD arrival/detection). The workshop was led by members of the Wildlife Section of the MA Division of Fisheries and Wildlife (hereafter referred to as MassWildlife) and included a group of agency communications specialists and district managers. U. S. Geological Survey staff and a volunteer acted as decision facilitators and led the analysis of the decision. Chronic wasting disease is an always fatal neurological disease that has spread across much of North America and threatens the health of deer populations in locations where it occurs (reviewed by Escobar et al. 2020). CWD can spread into new areas via two general mechanisms: (1) natural spread (e.g., dispersal of CWD-infected male white-tailed deer [Odocoileus virginianus]), and (2) anthropogenic spread (e.g., CWD spread facilitated by human intervention; Leiss et al. 2017, Escobar et al. 2020). Once CWD arrives in a state, natural resources agencies spend eight times more on CWD than agencies with no known cases; to cover these new CWD-related management activities, the natural resources agencies are typically forced to reallocate money from existing conservation priorities (Chiavacci, 2022). As of May 2024, there were 34 U.S. states and five Canadian provinces that had detected CWD positive free-ranging and/or captive animals in the family Cervidae (collectively referred to as ‘cervid’ hereafter), and the number of new states/provinces that are detecting CWD for the first time continues to grow (U. S. Geological Survey, May 2024). As of February 2024, the closest CWD positive state to MA with CWD detected in free-ranging white-tailed deer is Pennsylvania. To date, there have been no detections of CWD in MA, but testing has been limited in MA since 2012. The growing number of CWD positive states suggests that there may be increasing risk of CWD entering and establishing in MA as the number of CWD cases increases across North America. According to a 2023 survey of hunters in MA conducted by MassWildlife, 68% of hunters were concerned about CWD entering MA, and 88% of respondents said that it was at least moderately important to keep CWD out of MA; these survey results indicate that most hunters may support CWD risk reduction actions (Martin Feehan, Massachusetts Division of Fisheries and Wildlife, oral communication, 12 Feb 2024). In addition, 23.1% of responding deer hunters in MA have hunted for cervids in CWD-positive states/provinces in the last five years (not including states/provinces that have been able to successfully eradicate CWD following a positive detection). Participants of the survey were also asked, “how many deer have you harvested that tested positive for CWD?”. A total of three respondents said that they had one deer test positive for CWD, which, when extended to the whole population of MA deer hunters, results in an estimated 32 CWD positive deer harvested in CWD-positive states and imported into MA in the last five years. When asked about how they transport harvested deer from out of state into MA, the three participants indicated either “already processed & packaged” or “not applicable.” Note, that in MA, it is a violation of regulation to import whole carcasses or high-risk parts (e.g., head, brain, spinal tissues, bones) of any member of the Cervidae family (wild or captive) from a state/province that has detected CWD; it is legal to bring in deboned meat, cleaned skull caps, hides without the head, or a fixed taxidermy mount (Massachusetts Division of Fisheries and Wildlife, 2024a). To date, testing for CWD has been limited in MA since 2012. However, the data collected from the 2023 MA hunter survey suggests that there is a real risk of CWD being imported by a MA resident who has hunted in a CWD positive state. Therefore, given the higher costs of CWD management post arrival, the potential natural spread of CWD from nearby states, and the risk of CWD introduction via humanmediated cervid movement, MassWildlife is motivated to take actions that minimize the risk of CWD introduction and spread in MA with the ultimate goal of managing thriving wildlife populations and maximizing hunter and general public satisfaction, which are both parts of the MassWildlife mission. A 2.5-day rapid prototyping structured decision making workshop was held with MassWildlife staff to develop a decision framework for CWD management in MA. During the workshop, we defined the context and extent of CWD management activities in MA. Next, we identified four fundamental objectives that help achieve the mission of MassWildlife and that address stakeholder concerns. The fundamental objectives included: (1) maximizing hunter satisfaction and participation, (2) maximizing public satisfaction (non-consumptive), (3) maximizing health and sustainability of cervids, and (4) maximizing the efficiency of CWD management. Then, we generated a list of five alternatives (i.e., strategies) that varied the intensity of proactive and reactive actions. The five strategies were: (1) minimal proactive and minimal reactive actions, (2) intermediate proactive and intermediate reactive actions, (3) intensive proactive and intermediate reactive actions, (4) minimal proactive and intensive reactive actions, and (5) intensive proactive and intensive reactive actions. Lastly, we estimated the performance of each strategy on the fundamental objectives and assessed the overall performance of strategies relative to one another. We did so by first estimating the consequences of each alternative strategy on fundamental objectives using expert elicitation, and then, we elicited objective weights from MassWildlife staff to incorporate the relative importance of different fundamental objectives. Given that it is unknown when CWD will arrive in MA, we evaluated the performance of alternative strategies against fundamental objectives given three distinct scenarios for time to arrival of CWD: introduction in 2.5, 7.5, or 10+ years. The preliminary results of the rapid prototype indicate that the performance of the CWD management strategies that we evaluated depends on when CWD first arrives in MA. If CWD were to arrive in 2.5 or 7.5 years from now (February, 2024), then the ‘minimal proactive and minimal reactive’ strategy performs the best on both the deer population and cost fundamental objectives (fundamental objectives 3 & 4), but the ‘intensive proactive and intensive reactive’ strategy performs best on both of the human dimensions fundamental objectives (fundamental objectives 1 & 2) as well as the minimize CWD prevalence objective (also related to fundamental objective 3). We also found that public trust is likely to remain high across all five alternative strategies if CWD arrives after year 10, but public trust decreases if CWD arrives in year 2.5 or 7.5. After incorporating objective weights, we found that in scenarios where CWD arrives in the near-term (in years 2.5 or 7.5), an intermediate strategy (e.g., ‘intermediate proactive and intermediate reactive’ or ‘intensive proactive and intermediate reactive’) performed best, and the ‘minimal proactive and intensive reactive’ strategy performed worst. Conversely, if CWD were to arrive after 10 years, then the ‘minimal proactive and minimal reactive’ and ‘minimal proactive and intensive reactive’ strategies performed best. Collectively, these results suggest that the decision on which alternative strategy to employ is sensitive to when CWD arrives in MA. Following the discussion of the preliminary results, we identified the following four next steps. First, we discussed how a more detailed communications plan is needed and would likely alter the performance estimates of the alternative strategies on fundamental objectives 1 & 2, which were hunter and public satisfaction, respectively. The development of the communication plan would likely be easier once the alternative actions have been identified along with the audience and message. Second, a surveillance plan could be a useful tool to inform CWD management. Surveillance for CWD was performed in MA annually from 2002 to 2012 (n = 4,356 wild white-tailed deer and moose [Alces alces] samples). Limited surveillance was conducted from 2013 to 2022; and in 2023, 242 wild samples were collected. It is not clear whether MA needs a robust or minimal surveillance plan (e.g., is a minimal surveillance plan enough to detect the pathogen at the threshold that would trigger action?), or what type of invasion event the surveillance plan should target (e.g., natural vs anthropogenic spread events). The use of decision trees and a formal risk assessment may help answer these questions. Third, some of the elicited estimates from experts during this rapid prototype could be replaced with empirical data. Lastly, given that the decision was sensitive to when CWD arrived in MA and a surveillance plan would rely on the mode of introduction, forecasting and predicting the CWD invasion front and/or the likelihood of different incursion events across MA would provide valuable insights.

Massachusetts

Evaluating management alternatives for Wyoming elk feedgrounds in consideration of chronic wasting disease

Executive Summary The authors used decision and modeling analyses to evaluate management alternatives for a decision on whether to permit Cervus canadensis (elk) feeding on two sites on Bridger-Teton National Forest, Dell Creek and Forest Park. Supplemental feeding of elk could increase the transmission of chronic wasting disease (CWD) locally and disease spread regionally, potentially impacting elk populations over time with wider implications for Odocoileus hemionus (mule deer) and Odocoileus virginianus (white-tailed deer) populations and hunting, tourism, and regional revenue. Supplemental feeding is thought to improve overwinter elk survival and reduce the commingling of elk with cattle during months when brucellosis transmission risk is highest. We worked with the U.S. Department of Agriculture Forest Service to identify their fundamental objectives and associated performance metrics related to this feedground decision. We then developed disease and habitat selection models to quantify the effect of four management alternatives on select performance metrics. The four alternatives were to continue to permit feeding, phaseout permits to feed in three years, permit feeding on an emergency basis, or stop permitting feeding. In this report, we present methods and summarized results on disease and habitat selection models and summaries of other performance metrics analyzed by BIO-WEST, Inc. and Cirrus Ecological Solutions as part of an Environmental Impact Statement. Data from Wyoming Game and Fish Department (WGFD) supported the assumption that supplemental elk feeding allows for larger elk populations in a region. We documented that herd units (HU) without feedgrounds had 23 percent lower densities of elk per area of winter range when compared against HUs with feedgrounds, after accounting for differences in sightability of elk during counts on and off feedgrounds. Thus, throughout our analyses, we assumed feedground closures would reduce elk carrying capacity resulting in an average decline of previously fed elk population segments by 23 percent (5th and 95th percentiles = [11 percent, 35 percent]) by year 20. Most of that decline occurred within the first few years after a feedground ceases to operate. We used a panel of CWD experts to help estimate CWD trans-mission in fed and unfed elk population segments. In aggregate, the expert panel estimated that median values of direct and indirect transmission of CWD are expected to be 1.9 and 4 times higher, respectively, in fed elk populations compared to unfed elk. We used these disease transmission estimates in combination with local elk demographic rates and carrying capacity estimates to project disease and population dynamics. In year 20, we predicted CWD prevalence would increase to 42 percent (5th and 95th percentiles = [29 percent, 55 percent]), and 13 percent (5th and 95th percentiles = [4 percent, 26 percent]) on average for fed and unfed elk population segments, respectively, given a starting prevalence of 1.6 percent. The prevalence estimates for the unfed elk population segments are in the range of previous observations of CWD in elk in the western United States. The average CWD prevalence from 2016 to 2018 in the unfed elk population of Wind Cave National Park in South Dakota was 18 percent overall but up to 30 percent in some regions (Sargeant and others, 2021). Meanwhile, CWD prevalence in the Iron Mountain and Laramie Peak elk herds in Wyoming from 2016 to 2018 was 14 percent and 7 percent, respectively, despite being present since at least 2002 (Wyoming Game and Fish Department, 2020b). From 2016 to 2020, elk that were fed at Dell Creek and Forest Park constituted on average 12–20 percent of the total elk on their respective HUs. As a result, the differences between management alternatives are modest when considering the closure of only one feedground on a HU. The no feeding alternative for Forest Park resulted in a CWD prevalence of 17 percent (SD = 7 percent) in the Afton HU compared to 20 percent (SD = 7 percent) with continued feeding by year 20. In the Upper Green River HU, no feeding on Dell Creek resulted in a CWD prevalence of 27 percent (SD = 6 percent) compared to 30 percent (SD = 5 percent) with continued feeding. In terms of disease-associated mortality, we predicted the closure of Forest Park and Dell Creek feedgrounds would reduce the total number of CWD mortalities by 9 percent in the Upper Green River HU and 26 percent in the Afton HU during the 20-year timespan. Our spatial analyses predicted that management alternative effects vary by HU as a function of private property and other wildlife winter ranges proximity relative to feedground location. The predicted number of elk abortions on private land, as a proxy for brucellosis risk to cattle, may increase by 8–21 percent in the absence of feeding at Dell Creek and Forest Park. Eight feedgrounds are located on Bridger-Teton National Forest, all of which have permits that have expired or will expire prior to 2028. In addition, WGFD could change their management of feedgrounds given new information; therefore, we also assessed the cumulative effects of continued feeding, phaseout, and no feeding management alternatives across five HUs south of Jackson, Wyoming (Afton HU, Fall Creek HU, Piney HU, Pinedale HU, and Upper Green River HU). These five HUs ranged from about 41 to 85 percent of the elk herd using feedgrounds, which corresponded to a CWD prevalence at year 20 of 23–34 percent if all feedgrounds in those five HUs remained open relative to 12 to 14 percent if all feedgrounds were closed. We predicted feedground closures may result in immediate reductions in population size relative to alternatives that continue feeding (for example, continued feeding and emergency feeding alternatives); however, over longer periods of time, CWD-associated mortality leads to larger population reductions. The no feeding alternative resulted in higher elk population sizes compared to the continued feeding alternative after about 10 years of implementation. Delayed action under a phaseout alternative resulted in increasing the CWD prevalence to 20 percent relative to 12 to 14 percent, on average, without feeding on HUs with a large population of fed elk such as the Upper Green River HU. Summarizing our cumulative results across all five of the analyzed HUs, we predicted continued feeding will lead to fewer elk by year 20 (mean = 8,300, standard deviation [SD] = 740) compared to no feeding at U.S. Department of Agri-culture Forest Service sites (10,700, SD = 890). The closure of all feedgrounds was projected to result in the largest elk populations at year 20 (12,500, SD = 980). No feeding at all sites also resulted in the largest cumulative harvest of 57,700 (SD = 2,600) compared to 51,100 (SD = 3,800) for continued feeding at all current feedground sites on the five HUs. Continued feeding also resulted in the lowest brucellosis costs to producers ($194,600, SD = $11,500) compared to no feeding on all feedgrounds ($243,000, SD = $13,700). Assuming moderate reductions in hunter interest because of increasing CWD prevalence in elk, we predicted that no feeding resulted in regional revenues generated by hunting activities of $190 million (SD = $10 million) compared to $173 million (SD = $10 million) for continued feeding over the 20-year timeframe. Recent CWD detections in mule deer and elk in Grand Teton National Park has elevated the importance of the cur-rent decision on whether, and how, to permit elk feeding on Dell Creek and Forest Park and the management of the other feedgrounds. Aggressive male harvest has slowed, but not stopped, the increasing prevalence of CWD in mule deer (Conner and others, 2021). It is unclear whether harvest management can be an effective tool to slow the spread of CWD in elk. There are also no effective treatments or vaccines for CWD, and it is unlikely that any will be developed that can be easily deployed in the near future. Thus, reducing artificial aggregations is one of the few management approaches suggested by the Western Association of Fish and Wildlife Agencies (Almberg and others, 2017). Future surveillance and monitoring can be designed to resolve uncertainties that can improve future decision-making. If feedgrounds close, research could quantify elk population reductions in the absence of feeding, the redistribution of fed elk to other places, or the consequences of elk movement on private property. If feedgrounds remain open, research could assess how rapidly CWD spreads in artificial aggregations of elk; however, surveillance programs would need to be designed with sufficient power to detect initial changes of CWD prevalence. Delaying action on feedground management was projected to be costly. Results of the phaseout alternative relative to the no feeding alternative suggested a 3-year delay was enough for substantial long-term changes in CWD prevalence. The long-term persistence of infectious CWD prions in the environment suggests that feedground management decisions may have long-lasting consequences. Our results indicated tradeoffs in the ability of a management agency to achieve all their objectives, and all management alternatives resulted in significant reductions in elk population size. This report contains the foundational elements for formal decision analysis methods, which can be implemented to help decision makers transparently evaluate the consequences of decision alternatives and identify the set of actions that best achieve agency and stakeholder priorities.

Wyoming

Evaluating the risk of SARS-CoV-2 transmission to bats in the context of wildlife research, rehabilitation, and control

Preventing wildlife disease outbreaks is a priority for natural resource agencies, and management decisions can be urgent, especially in epidemic circumstances. With the emergence of SARS-CoV-2, wildlife agencies were concerned whether the activities they authorize might increase the risk of viral transmission from humans to North American bats, but had a limited amount of time in which to make decisions. We describe how decision analysis provides a powerful framework to analyze and reanalyze complex natural resource management problems as knowledge evolves. Coupled with expert judgment and avenues for the rapid release of information, risk assessment can provide timely scientific information for evolving decisions. In April 2020, the first rapid risk assessment was conducted to evaluate the risk of transmission of SARS-CoV-2 from humans to North American bats. Based on the best available information and relying heavily on expert judgment, the risk assessment found a small possibility of transmission during summer work activities. Following that assessment, additional knowledge and data emerged, such as bat viral challenge studies, that further elucidated the risks of human-to-bat transmission and culminated in a second risk assessment in the fall of 2020. We updated the first SARS-CoV-2 risk assessment with new management alternatives and new estimates of little brown bat ( Myotis lucifugus ) susceptibility, using findings from the fall 2020 assessment and other empirical studies. We found that new knowledge led to an 88% decrease in the median number of bats estimated to be infected per 1,000 encountered when compared to earlier results. The use of facemasks during, or a negative COVID-19 test or vaccination prior to, bat encounters further reduced those risks. Using a combination of decision analysis, expert judgment, rapid risk assessment, and efficient modes of information distribution, we provided timely science-based support to decision makers for summer bat work in North America.

Wildlife Society Bulletin